ID:

dgr_367

 Coordinate:

scaffold_15112:3584765-3584915 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-22.0 -21.8 -21.8

Flybase annnotation

exon [dgri_GLEANR_7387:9]; CDS [Dgri\GH23090-cds]; intron [Dgri\GH23090-in]

Repeatable elements

NameClassFamilyStrand
(CGG)nSimple_repeatSimple_repeat+
TART_DVLINEJockey+
mature
  1. scaffold_14345:218-236 +
  2. scaffold_14624:1447940-1447958 +
  3. scaffold_14853:5075232-5075250 +
  4. scaffold_14906:6586022-6586040 +
  5. scaffold_14906:10246544-10246562 +
  6. scaffold_15074:3411498-3411516 +
  7. scaffold_15074:5507265-5507283 +
  8. scaffold_15081:748226-748244 +
  9. scaffold_15110:3053563-3053581 +
  10. scaffold_15110:5074694-5074712 +
  11. scaffold_15110:15486469-15486487 +
  12. scaffold_15110:21604168-21604186 +
  13. dgr_367  scaffold_15112:3584891-3584909 +
  14. scaffold_15203:1240964-1240982 +
  15. scaffold_15203:9559979-9559997 +
  16. scaffold_15203:10589922-10589940 +
  17. scaffold_15245:449593-449611 +
  18. scaffold_15245:4542427-4542445 +
  19. scaffold_15245:15726338-15726356 +
  20. scaffold_15252:9368915-9368933 +
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CGTCGGTGGAGGCGGCGGCGGCAGCAGCAGCGCTGGCGGCGACGGGGGCGGTGCAGCAACAAATGGGGGCTACGGCGGCGGGGGCGGTGGCAGCAGCAGCGGCAACGGTGGAGGCCATCATCACTACCAACAGCAACAACATCATTATCATAATTATCAGCAAACGCATCATCAGCAACAACATCAACATCAACAACAACAACAACAGCATCAACATCAGCATCAGTCGTCTGGCACAGCCAACCAGCACA
**************************************************.(((..............((....))((.((.((.((((((.....((.((....)).))...)))))).)).)).))...............................((....)).......)))........................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M041
female body
 V109
male body
..................................CGCGGCGACGGGGGCGGT....................................................................................................................................................................................................... 18 1 1 282.00 282 276 6
.................................TCGCGGCGACGGGGGCGGTT...................................................................................................................................................................................................... 20 2 1 164.00 164 164 0
.................................TCGCGGCGACGGGGGCGGT....................................................................................................................................................................................................... 19 1 1 133.00 133 131 2
..................................CGCGGCGACGGGGGCGGTTC..................................................................................................................................................................................................... 20 2 1 118.00 118 117 1
..................................CGCGGCGACGGGGGCGGTT...................................................................................................................................................................................................... 19 2 4 77.25 309 306 3
.................................TCGCGGCGACGGGGGCGGTTC..................................................................................................................................................................................................... 21 2 1 57.00 57 56 1
..................................CGCGGCGACGGGGGCGGTTCG.................................................................................................................................................................................................... 21 3 3 49.67 149 147 2
.................................TCGCGGCGACGGGGGCGGTTCG.................................................................................................................................................................................................... 22 3 1 46.00 46 46 0
................................ATCGCGGCGACGGGGGCGGTT...................................................................................................................................................................................................... 21 3 1 41.00 41 41 0
................................ATCGCGGCGACGGGGGCGGT....................................................................................................................................................................................................... 20 2 1 39.00 39 39 0
...................................GCGGCGACGGGGGCGGTTC..................................................................................................................................................................................................... 19 1 1 33.00 33 32 1
...................................GCGGCGACGGGGGCGGTT...................................................................................................................................................................................................... 18 1 3 24.33 73 73 0
...............................GATCGCGGCGACGGGGGCGGTT...................................................................................................................................................................................................... 22 3 1 21.00 21 21 0
...............................GATCGCGGCGACGGGGGCGGT....................................................................................................................................................................................................... 21 2 1 17.00 17 17 0
....................................CGGCGACGGGGGCGGTTC..................................................................................................................................................................................................... 18 1 1 15.00 15 15 0
.....................................................................................GGTGCCAGCAGCCGCGGTAA.................................................................................................................................................. 20 3 16 12.88 206 206 0
......................................................................................GTGCCAGCAGCCGCGGTAA.................................................................................................................................................. 19 3 20 11.85 237 236 1
...............................GATCGCGGCGACGGGGGCGGTTC..................................................................................................................................................................................................... 23 3 1 9.00 9 8 1
................................ATCGCGGCGACGGGGGCGGTTC..................................................................................................................................................................................................... 22 3 1 9.00 9 9 0
...................................GCGGCGACGGGGGCGGTTCG.................................................................................................................................................................................................... 20 2 3 7.67 23 23 0
.................................TCGCGGCGACGGGGGCGG........................................................................................................................................................................................................ 18 1 3 7.33 22 20 2
....................................CGGCGACGGGGGCGGTTCG.................................................................................................................................................................................................... 19 2 3 3.00 9 9 0
..............................GGATCGCGGCGACGGGGGCGGT....................................................................................................................................................................................................... 22 3 3 1.67 5 5 0
.................................TCGCGGCGATGGGGGCGGTTC..................................................................................................................................................................................................... 21 3 2 1.50 3 2 1
................................ATCGCGGCGACGGGGGCGG........................................................................................................................................................................................................ 19 2 4 1.25 5 5 0
...............................GATCGCGGCGACGGGGGC.......................................................................................................................................................................................................... 18 2 7 1.14 8 8 0
.................................TCGCGGCGACGGGTGCGGT....................................................................................................................................................................................................... 19 2 1 1.00 1 1 0
.................................TCTCGGCGACGGGGGCGGT....................................................................................................................................................................................................... 19 2 1 1.00 1 1 0
..................................CGCGGCGACGGGGGAGGT....................................................................................................................................................................................................... 18 2 1 1.00 1 0 1
................................CTCGCGGCGACGGGGGCGGT....................................................................................................................................................................................................... 20 1 1 1.00 1 1 0
...............................................................................................GCAGCGGCAACGGTGGAGGCCACC.................................................................................................................................... 24 1 1 1.00 1 0 1
..................................CGCGGCGACGGGGGCGGTC...................................................................................................................................................................................................... 19 2 1 1.00 1 1 0
.................................TCGCGGCGACGGGGTCGGTTC..................................................................................................................................................................................................... 21 3 1 1.00 1 1 0
...............................GATCGCGGCGACGGGGGCGG........................................................................................................................................................................................................ 20 2 4 0.75 3 3 0
..............................CAATGGCGGCGACGGGGGCGGTT...................................................................................................................................................................................................... 23 3 2 0.50 1 1 0
...................................GCGGCGATGGGGGCGGTTC..................................................................................................................................................................................................... 19 2 2 0.50 1 1 0
...............................GATCGCGGCGACGGGGGCG......................................................................................................................................................................................................... 19 2 7 0.43 3 3 0
.....................................GGCGACGGGGGCGGTTCG.................................................................................................................................................................................................... 18 2 7 0.43 3 3 0
..................................CGCGGCGACGGGGGCGGTTCC.................................................................................................................................................................................................... 21 3 5 0.40 2 2 0
..................................CGCGGCGAAGGGGGCGGT....................................................................................................................................................................................................... 18 2 5 0.40 2 1 1
................................ATCGCGGCGACGGGGGCG......................................................................................................................................................................................................... 18 2 8 0.38 3 3 0
..................................GGCGGCGACGGGGGCGGTTCG.................................................................................................................................................................................................... 21 2 3 0.33 1 1 0
....................................................................................CGGTGCCAGCAGCCGCGGTAA.................................................................................................................................................. 21 3 6 0.33 2 2 0
..................................TGCGGCGACGGGGGCGGTT...................................................................................................................................................................................................... 19 2 8 0.25 2 1 1
..................................CGCGGCGACGGGGGCGGTTCCG................................................................................................................................................................................................... 22 3 4 0.25 1 1 0
.................................TCGCGGCGACGGGGGCGGTGGG.................................................................................................................................................................................................... 22 3 4 0.25 1 1 0
...................................GCGGCGACGGGGGCGGTTCC.................................................................................................................................................................................................... 20 2 4 0.25 1 1 0
.................................TCACGGCGACGGGGGCGGTT...................................................................................................................................................................................................... 20 3 5 0.20 1 1 0
................................ATCGCGGCGACGTGGGCGGT....................................................................................................................................................................................................... 20 3 6 0.17 1 1 0
..................................CGCGGCGACGGGGGCGGTTT..................................................................................................................................................................................................... 20 3 13 0.15 2 2 0
..................................CGCGGCGACGGAGGCGGTTC..................................................................................................................................................................................................... 20 3 9 0.11 1 0 1
..................................CGCGGTGACGGGGGCGGT....................................................................................................................................................................................................... 18 2 10 0.10 1 1 0
....GGTGGAGGCGGCGGCGGC..................................................................................................................................................................................................................................... 18 0 10 0.10 1 1 0
..................................CTCGGCGACGGGGGCGGTT...................................................................................................................................................................................................... 19 3 20 0.10 2 2 0
......................................................................................GTGCCAGCAGCCGCGGCAA.................................................................................................................................................. 19 2 11 0.09 1 1 0
.................................TCGTGGCGACGGGGGCGGTT...................................................................................................................................................................................................... 20 3 12 0.08 1 1 0
..................................CGCGGTGACGGGGGCGGTTC..................................................................................................................................................................................................... 20 3 15 0.07 1 1 0
..TCGGTGCAGGCGGCGGACG...................................................................................................................................................................................................................................... 19 3 18 0.06 1 1 0
................................................................................................................................................................................AACAACATCAACATCAACA........................................................ 19 0 20 0.05 1 1 0
...........GCGGCGGCGGCAGCAGCAGC............................................................................................................................................................................................................................ 20 0 20 0.05 1 1 0
......................................................................................GTGCCAGCAGCCGCGGTAAC................................................................................................................................................. 20 3 20 0.05 1 1 0
..................................CGCGGCGACGGAGGCGGTT...................................................................................................................................................................................................... 19 3 20 0.05 1 1 0
...........GCGGCGGCGGCAGCAGCA.............................................................................................................................................................................................................................. 18 0 20 0.05 1 1 0

Anti-sense strand reads

GCAGCCACCTCCGCCGCCGCCGTCGTCGTCGCGACCGCCGCTGCCCCCGCCACGTCGTTGTTTACCCCCGATGCCGCCGCCCCCGCCACCGTCGTCGTCGCCGTTGCCACCTCCGGTAGTAGTGATGGTTGTCGTTGTTGTAGTAATAGTATTAATAGTCGTTTGCGTAGTAGTCGTTGTTGTAGTTGTAGTTGTTGTTGTTGTTGTCGTAGTTGTAGTCGTAGTCAGCAGACCGTGTCGGTTGGTCGTGT
**************************************************.(((..............((....))((.((.((.((((((.....((.((....)).))...)))))).)).)).))...............................((....)).......)))........................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M041
female body
.....................................................................................CCACCGTCGTCGTCGCCG.................................................................................................................................................... 18 0 11 0.09 1 1
.............................................................................................................CCGGCGGTAGCAGTGATGG........................................................................................................................... 19 3 15 0.07 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droGri2 scaffold_15112:3584715-3584965 + dgr_367 CGTCGGTG-----------GAGGCGGCGGCGGCAGCAGCAGCGC-----------------------TGG----------------CG---GCGACGGGGGCG------GT-------------------------G------CAGCAACAAAT----------------GGGGGCTAC------------------GGCGGCGGGGGCGGTG------GCAGCAGCAGCGGCAACGG-------------------------------TGGAG--GCCATCA---------TCACT---A------------------CCAACAGCA------A----------------------------------------CAACATCAT-T-ATCA--------------------------T---AATTATCAGCA---------------A-----------------------------------------ACGCA----------TCATCAGCAACAA----------------------------------------C------------ATCAAC--AT-CAACAA---------------------CAACAACAACAGCATCAA------------------C------AT------C---------AGCATCAG---------TCGTCTG---GCACAGC--------CAACC--AGCACA
droVir3 scaffold_13042:2617612-2617880 - CAGCCGCA-----------GCAGCACCGCCGTCAGCAGCAACAGCT---------------------GTG----------------CG---ACGGCAAAAGCG------T----------------------------------------TG--CAGCTGCAACTGCAGC---------GGCGCCCAC---------GGCGGCGGCAGCAGCA------------GCAGCCACAACGG-------------------------------------CGGCGGCGGC---AA------T--GG------------------CCAACAGCAACAACAA-------------CAGCA-CAACAGC------------AACGGCAGCAT-C-AACA-ACAG----------------------------TAACAGCA---------------AATACAGTAATTCAA---------------------------CCACA----------ACA---------------------------------GCAA-------------C------------AGCAAC--A-ACATCATCAGCAGCAGCAGCAG---------------C---AGCAGCAACAG---------------------------T---CATAAA----------------------------TGCAACTGC---AA-----------CA
droMoj3 scaffold_6473:10898279-10898519 + CAACAGCA-----------GCAGCAACAGCAGCAGCAGCAGCAA-----------------------CAG----------------CA---GCAGCAGCAGCA------GC------------------A------G------CAACAGCAG--CAGCAGCAA---------------C------------------AGCAGCAGCAGCAGCA----------------------------------------------------GCAGCAACAGCAGCAGCAGCAGCAGCAGCAGC-------------------------------------------------------------------------AGCAG--------------CAG-C------------AGCAA-C------------------AGCAGCAGCAGCAGCAG-----------------------------------------CA-----------------------------------------------------GCAGCAACAGCAGCAGC---AACAACA---G------CA------------------GCAA---C---AGCAGCAGCAACAGCAGCAA---------------------------CAGCAGCAACAGC---------------------AGC-AACAGCAACAGCAAC---------AAC
droWil2 scf2_1100000003789:1775-2016 - CAACAACA-----------GCAACAACAACTGCAGCAGCAACAA-----------------------TTG----------------CA---GCAACAACAGCA------AC------------------A------G------CAGCAACAA--CAGCAGCAACAACAA---------C------------------------AGCAGCA------------------G-------------------------CAACAGCAGCATCAGCAACAGCAACAGCA---------GCAGCGAAT------------------GCAACAGCAACAGCAA-------------C---------------------------------------------------------AGC----AGCAA---C------------------------AA-----------------------------TTGCAGCAACAACAACA----------ACAGC---AGCAG---------------------CAA----------------CAA---------CAGCAAC--AG-CAACAA---------------------CAACAGCAGCAGCAACAGCAACAA---------------------------C---------------------------------AGC-AGCAGCAGC---AG-----------CA
dp5 XR_group6:12701970-12702208 + --GCAGCA-----------CCAGCAACAGCAGCAACAGCAGCAT-----------------------CAG----------------CAGCAGAAGCAGCAGCA---------------------------------GCAACAGCAGCAACAG--CAG---------------------C------------------AGCAGCAGAAGCAGCA------GCA------G-------------------------CAACAGCAGCAACAGCAGCAGCAACAGCA---------GCAGCAGCA------------------AC-------------------------------------------------------------------------------------AGCAA-C------------------AACAGCAGCAGCAACAG-----------------------------------------CA---G----------------------CAGCAACAGCAG----------------------------CAGC---AACAGCA---G------CA------------------GCAA---C---AGCAGCAGCAGCATCAGCAACATCAGCAGC---------------------------AAA---------------------AGC-ATCAGCAAC---AGC---------AGC
droPer2 scaffold_14:2089015-2089261 + CAACAGCA-----------GCAGCAGCAGCAACAGCAACAGCAG-----------------------CAG----------------CA---GCCACAAAAGCA------------------------------------ACAGCAGCAGCAA--CAGCAGCAGCAGCAG---------GTGC------------------AGCAGCT-------------------------------------------------ACAAAAGCAGCAGCAACAGCACCAGCAGCAC---------G---A------------------GCATCAGCA------A-------------C------------------------AG------------------CG-------------------------------------------TCAGCA---A-----------------------------------------CAGCAG--CA--------------------GCATCAGCAACAGCATCAGCAGCAT-------------C------------AGCAAC--A-GCATCAG---------------------CAACAGCAGCAGCAGCAGCAGCTA---------------------------CAGCAGCATA----------------------------AGCAGCTGC---AGGAA--ACCA-ACA
droAna3 scaffold_13337:10618243-10618492 - CAGCAGCA-----------ACAACAGCAGCAGCACCAACAGCAC-----------------------TTG----------------CA---GCAACAGCAGCA------GC------------------A------C------GCACA-----------TCACCAGCA--TGTAGCTGC------------------CGT-GTTGCAGCAGCA------GCA------G-------------------------CAACAGCAGCAACCGCATGCACTCCATCA---------GCAGCATGG------------------ACAGCAGCAACATCAT-------------G--------------------------------------GCCA--------------------------T---AACCAGCA------CCAGCAC--------------------------------CATTCC---------CACCA----------GCAGC---AGCAG----------------------------------------CAGC---------AACAAC--AG-CA------------------GCAG---CAACACCATCACCAACAACAACAC----------------------------------------------------------------GCTCAGCAGC---AGC---------AAC
droBip1 scf7180000396580:1280439-1280677 + CGTTGATG-----------TGGTCGACTGCAGTGACT-CGGAAA-----------CGCCGGCGGCAACTG-------------GAGCA---GCAGCA---------------------------------------GCCACTGCAGCA-----------ACAGCGA------------A------------------CGCAGCAGCGGCGGCG------------GCAGCAGCAGCAT-------------------------------T-------------GCAG------------GC------------------GCAACAGCA------AGCGCGTCAGG---------------CA----------TTG--------------CGT-G---TT--G-CACAG---------------------------------------------------------------------------------CAACA----------TCAGC---AG------------------------CAG----------------CAG---------CAGCAAC--AG-CAACAA---------------------CAACAACAACAGCAAAGGCAACAG------------ACACATCACCA------------------------------------------CGCAACGGC---AA--ACA--AGCAAC
droKik1 scf7180000302685:196294-196543 + CAGCAGCA-----------GCAGCATTTACAGCAGCAGCAACAA-----------------------CAG----------------CA---TCTACAGCAGCAGCA------------------------------A------CAACAGCAT--TTACAGCAGCAGCAG---------CAGC------------------AGCATTT-------------------------------------------------ACAGCAGCAGCAGCAACAGCATCTACAGCAG-------------------------------------------------------------------------CAGCAGCAACATCAC------------------CA------GCAGCAAC-------------------AAC------AAC------AG-----------------------------------------CA---T----CTACA----------------------------------------GCAGCAACAGCAGC---AGCTGCAGCA---A-CA--TCT------------------ACAGCAGCAACAGCAGCAGCATCATCTACAG---CAGCAGC---------------------------AGC-------------------AT---CTACAGCAAC---AGC---------AGC
droFic1 scf7180000454039:96083-96318 - CCTCAGGT-----------GATGCAACAACAACTGCAACAGCAACA--------------ACTGCAACAG----------------CAGCAGCAGCA---------------------------------------A------CTACTGCAA--CAACAGCAACAACTG---------C------------------------A----------------------------------------------------ACAGCAGCAGCAGCAACAGCAGCAACAGCACCAGCAGCAAC------------------------------------------------------------------------------------------AACT-GCAGCAGCAGCAACAGC-------------------AGCA---------AC---AG-----------------------------------------CAGCA----------GCAGC---ACCAGCAGCAACTGCAG----------------------------CAGC---------AGCAAC--A-GCA------------------G---------------CA---GCAA------------------C------AGCAGCAAC------AAT----------------------------TGCAACAGC---AGCAA--CCCTTGCA
droEle1 scf7180000490214:708610-708858 + CATCAGCA-----------GCAGCAGCAGCAACAGCAGCAGCAG-----------------------CCA----------------CC---GCCGCCATCGCA---GCAGC---AGCAACAGTTGCATCAGCTCAAGTCACCGCAGCA------------------------------------------------------------------------------------------------------------ACATCAGCAGCAGCAATTGCAGCAGCAGCAC---------------------------------------------CAG-------------C---------AGCAGCAGC---------------A-G-CAACAC-CA------CCAGCAGC-------------------A------------------G-----------------------------------------CA-------------GCAGCAGCATCAG----------------------------------------C------------AACA------AC------------------------------ACCAGCAGCAACATCACCAG---CAGCAGCAAC------AG------C---------AGCAGCAGCAAAACGAATCGGATG---TCATACC--C-------ATT--AGCACG
droRho1 scf7180000779334:988928-989183 - CAGCAGCA-----------GTTGCAGCATCAGCAGCAACAGCAA-----------------------CCGTCGCCCATGTTGGGCAGA---CCG---GCAGCAGCAA---C------------------ACCCACAG-----------------ATA-TGCAGCGATAT---------GTGC------------------AACGGAT---ACAGCAGAATTA------T------CAGCAC-------CTACAGCAA---------------------------------------CATCAGCAGCAACAGCAGCAGCAACAGCAGCA------A----------------------------------------CATCAGCAG-C-AACAG-CA------G----------------------CAGCAGCA---------------A-----------------------------------------CAGCA----------GCAGC---AGCAG-------------------------------CAACAGCAGC--------------------AG----------------------------CAACAGCAGCA-CAACAGCAGCAG---------------------------C---------------------------------CAC-AGCAGCAGC---AG-----------CA
droBia1 scf7180000302113:2271370-2271619 + CAACACTC-----------GAGGCGGCAGCGGCAGCAGCAGCAA-----------------------CGT----------------CT---GTGGCAGCAGCA---ACACC---AGCAACTGTAGGAGCAACATCAGCAACAGCAACA-----------ACAACAA------------C------------------TGTAGCAGCAACAGCA----------------------------------------------------------GCAGCAACACCA---------AC----------------------------------------------------------------AACTGTAGG---------------A-G-CAACAT-CA------GCAACAGC-------------------AAC------AAC------AA-----------------------------------------CA---A----CTGTA----------------------------------------GCAGCAACAGCAGC---AGCGATATCA---A-CA--ACT------------------GTAGCAGCAACAGCAGCAGCGATATCAACAA---------------------------C---------------------------------TG-TAGCAGCAGC---AGC---------AAC
droTak1 scf7180000415256:362403-362653 + CAGCAGTT-----------GGAGAAGCAGCAGCAGCAGCAGTAT-----------------------CAG----------------GAACAGCA---GCAA---------C------------------AGCTATATCAACAGCAGCAATAT--CAGCTGCAACTGGAGA---------AGCA-----GCAACTGGA-------------AAA-------------------------------------G------------CAGAAGCATCCATACCAGCA---------GCAACTGGA------------------AA-------------------------------------------------------------------------------------AGCAC-C------------------AGCAGCAGCAACAACAA-----------------------------------------CTACA----------TCAGC---AGCAG----------------------------------------CAGC---------AACAAC--AG-CA------------------GCAA---CAACAGCAGCAGCAGCAA------------------C------AT------C---------AGCCTCAA---------CCGC-CA---ACTCAGCAAC---AGCAA--CCCATTCC
droEug1 scf7180000409804:1107773-1108013 + CAACAGAA-----------AATACAGCAGCAGCAGTATCAAGAG------------------------------------------CA---GCAGCAACAGCT------------------------------ATATCAACAGCAACAATAT--CAGCTGCAACTGGAGA---------AGCA-----ACAACTGGA-------------AAA-------------------------------------G------------CAAAAGCATCCATACCAGCA---------GCAACTGGA------------------AAAGCAGCA-------------------------------------GC---------------------------A----------------------GCAACATCAGCAGCA------AC------AA-----------------------------------------CAACA----------TCAGC---AGCAA----------------------------------------CAGC---------AACAT------C------------------------------AGCAGCAGCAACAACATCAC---CAGCAGCAAC------AT------C---------AACCTCAA---------CCGC-CA---ACTC---------AGC---------AGC
dm3 chr3R:14866422-14866678 + CAGCAGCA-----------AATGCAGAAGCAACAGCAAATACAG-----------------------CAT-CAGCAATAT------CA---GGAGCAGCAGCAGCAA---C------------------AACTATATGAACAGCAGCAGTAT--CAGCTGCAATTGGAGA---------AGCA-----GCATCTGGA-------------TAA-------------------------------------G------------CAAAAGCATCCGTACCAGCA---------GCAACTGGA------------------AAAACAGCA------A--------------------------------------------------------------------------------------------------CAGCAGCAGCAA--------------------------------------------CAGCAG--CA--------------------GCAACAACATCACCAACAGCAACAC-------------C------------AACAAC--A-ACA------------------------------CCAACAGCAACAA------------------CATCAGCAACAC---C---------------------------------AAC-AGCAACA--------------TATACA
droSim2 2l:12890562-12890812 + CAACAGTC-----ACCGCAGCAACG-----TCCACCAACAGCGATATCG------------------CCG----------------CT---GGCTCAGGTGCA---------------------------GCAGCAGCAGCAACAGCA-----------GTTGCAA------------C------------------AGCAGCAGCAACAGCT-------------------------------------------C---------------------CAGCAGCTG-------------------------------------------------------------------------CAGCAACAGCAGTTC-----------CAGCAG-CA------ACAACTGCAAC-AACAG---C---------AGTTCCAGCAACAA--------------------------------------------CAGTTGCA-------GCAACAGCAACTG----------------------------------------C------------AGCA------------------------------------ACAGCAGCAGCAACAGCAACAG---CTGCAGCAAC------AG------C---------AGCAGCAA---------CCGG-CA---TCTCA------------ATC--AGTACC
droSec2 scaffold_0:131720-131982 - CGCCACAGGAGGCG-----GCGGGGCAGGTGCCACCAGCAACAATGGCGTGAATGCA-----------------------TGGGC------CTTGCAGCAGCAGCAACA--------AACCGCCG------C-CCTGCACCATCAGCA-----------ACAGCAG---------------------------------------CAGCAGCA------GCA------T-------------------------CAACAGCAGCAAC------------ACCA---------AC----------------------------------------------------------------AGCACCTAC---------------A-G-CAACAC-CA------TCAAGCGC-------------------A------CCATCAG-----------------------------------------------CA---T----GTCCT----------------------------------------GCAGCAGCAGCAGCAGC---AACAGCA---G-CA--CTC------------------CCAGCATCAGCAT---CAGCAGCAACATCAC------GGCC---------------------------ACC---------------------CGC-TGCATCCGC---ATC---------ATA
droYak3 2R:14067784-14068028 - CGCCGCCG-----------GAG-GAGGTGGAGGAGGAGGAGGAG-----------------------GAG----------------GA---GTTGGAGCAGGCGGG------------------------------G------CAGCCGCGAA-------------------------------------------------CGGCAGCAGCA------------GCAGCAACAGCAGCGGAGGCGGA--G------------CAGTCGGCACCAC-TCATCA---------TCAGCACCA------------------AC-------------------------------------AGC------------AC----------C-ACCA--------------------------G---CATCACCATCA---TCCGA------AT-----------CATCTGCATCAGCATCAGTCT---------CATCAA----TTGCC----------------------------------------GCAGCAGCAGCAGC---------------AAC--A-------------------------------------------GCAG------------------C------AG------C---------AAGCACAT---------CAGG-CG---GCACAGCAGG---AAC---------ACC
droEre2 scaffold_4929:9005892-9006137 - CAACGGCG-----------GCGGCTGCAGCTGCAACAGCAACAG-----------------------CTG----------------CC---GCGGCGGCAGCT------GCAGCAGTGGT---------GGCCCTGCCGACGGCATC--------------------------------------------------------AGCAGCA------------------GCCGCAGCG--------------------------------------CCGCAGCAGC---------ACGC-GG------------------CCTACGG--ACAGCAG----------CAGCAGCAGCAGCAGCCGCAGC---------------A-G-CATCTC-CA------GCAGCAGC-------------------AGC------AAC------AT-----------------------------------------CT---T----GGCCA----------------------------------------GCACCACCAGCAAC---ATCCGCAGCA---A-CA--CGC------------------GCAGCAGCAGCAG------------------------------------------------------------CAA---------CTGA-TG---ACCC---ATC---AGC---------AGC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droGri2
CGTCGGTG-----------GAGGCGGCGGCGGCAGCAGCAGCGC-----------------------TGG----------------CG---GCGACGGGGGCG------GT-------------------------G------CAGCAACAAAT----------------GGGGGCTAC------------------GGCGGCGGGGGCGGTG------GCAGCAGCAGCGGCAACGG-------------------------------TGGAG--GCCATCA---------TCACT---A------------------CCAACAGCA------A----------------------------------------CAACATCAT-T-ATCA--------------------------T---AATTATCAGCA---------------A-----------------------------------------ACGCA----------TCATCAGCAACAA----------------------------------------C------------ATCAAC--AT-CAACAA---------------------CAACAACAACAGCATCAA------------------C------AT------C---------AGCATCAG---------TCGTCTG---GCACAGC--------CAACC--AGCACASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....................................................................G----------------CG---GCGACGGGGGCG------GT-------------------------T------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18324.3373730
....GGTG-----------GAGGCGGCGGCGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18100.10110
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA----------------------------------------C------------ATCAAC--AT-CAACA..........................................................................................................................................19200.05110
......................GCGGCGGCGGCAGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05110
......................GCGGCGGCGGCAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05110
droVir3
CAGCCGCA-----------GCAGCACCGCCGTCAGCAGCAACAGCT---------------------GTG----------------CG---ACGGCAAAAGCG------T----------------------------------------TG--CAGCTGCAACTGCAGC---------GGCGCCCAC---------GGCGGCGGCAGCAGCA------------GCAGCCACAACGG-------------------------------------CGGCGGCGGC---AA------T--GG------------------CCAACAGCAACAACAA-------------CAGCA-CAACAGC------------AACGGCAGCAT-C-AACA-ACAG----------------------------TAACAGCA---------------AATACAGTAATTCAA---------------------------CCACA----------ACA---------------------------------GCAA-------------C------------AGCAAC--A-ACATCATCAGCAGCAGCAGCAG---------------C---AGCAGCAACAG---------------------------T---CATAAA----------------------------TGCAACTGC---AA-----------CASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....GCA-----------GCAGCACCGCCGTCAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.003000000000000000000000000000000000000000000000000000000000000003
.....................................GCAACAGCT---------------------GTG----------------CG---ACGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002000100000001000000000000000000000000000000000000000000000000000
...................................................................GTG----------------CG---ACGGCAAAAGCG------T----------------------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.002000000020000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCAA---------------------------CCACA----------ACA---------------------------------GCAA-------------C------------AGCAAC--..................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
.......................................................................................G---ACGGCAAAAGCG------T----------------------------------------TG--CAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
............................................CT---------------------GTG----------------CG---ACGGCAAAAGCG------T----------------------------------------TG--C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................ACAG----------------------------TAACAGCA---------------AATACAGT.............................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000100
.....................................GCAACAGCT---------------------GTG----------------CG---ACGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GCA---------------AATACAGTAATTCAA---------------------------CCACA----------............................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................AGC---------GGCGCCCAC---------GGCGGCGGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................AGCA-CAACAGC------------AACGGCAGC......................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................CAACAGC------------AACGGCAGCAT-C-AACA-............................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000010000000000000000000000000000000000000
...................................................................................................................................................................................................................................AGCCACAACGG-------------------------------------CGGCGGCGGC---....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------C---AGCAGCAACAG---------------------------T---CATAAA----------------------------TGCAACTGC---AA-----------C.3211.001000000000000000000000000000000000000000000000000000000000000001
..........................................................................................................................................................CAGCTGCAACTGCAGC---------GGCGCCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000010000000000
...............................................................................................CAAAAGCG------T----------------------------------------TG--CAGCTGCAACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
.......A-----------GCAGCACCGCCGTCAGCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000100000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................AGC---------GGCGCCCAC---------GGCGGCGGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000100000000000000000000000000000000000000000000000000000000000
....................................AGCAACAGCT---------------------GTG----------------CG---ACGGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000010000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................AT-C-AACA-ACAG----------------------------TAACAGCA---------------A....................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000001000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................TAACAGCA---------------AATACAGTAATTCAA---------------------------CCACA----------A...........................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................G-------------------------------------CGGCGGCGGC---AA------T--GG------------------CC...................................................................................................................................................................................................................................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
......................................CAACAGCT---------------------GTG----------------CG---ACGGCAAAAGCG------T----------------------------------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC--A-ACATCATCAGCAGCAGCAGC............................................................................................................................2470.574000010000000000000000000000110000000001000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------------------------CCACA----------ACA---------------------------------GCAA-------------C------------AGCAAC--..................................................................................................................................................2120.501000000000000000001000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAC--A-ACATCATCAGCAGCA.................................................................................................................................2150.402000000000000000000000000000010000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------CCACA----------ACA---------------------------------GCAA-------------C------------AGCAAC--..................................................................................................................................................2030.331000000000000000010000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC--A-ACATCATCAGCAGCAGCAGCA...........................................................................................................................2560.332000000000000000000000000001000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAA-------------C------------AGCAAC--A-ACATCATCAGCAGCA.................................................................................................................................2730.331000000000000000000000000000000001000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC--A-ACATCATCAGCAGCAGC...............................................................................................................................2190.333000000100000000000000000000000000000101000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC--A-ACATCATCAGCAGCAGCA..............................................................................................................................2280.252001000000001000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA-------------C------------AGCAAC--A-ACATCATCAGC.....................................................................................................................................2240.251001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAC--A-ACATCATCAGCAGCAGC...............................................................................................................................2340.251001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--A-ACATCATCAGCAGCAGCAGC............................................................................................................................22140.213001000000000000000000000000000000200000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------CCACA----------ACA---------------------------------GCAA-------------C------------AGCAA.....................................................................................................................................................1950.201000000000000000000000010000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC--A-ACATCATCAGCAGCA.................................................................................................................................20100.202000000000000010100000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-------------C------------AGCAAC--A-ACATCATCAGC.....................................................................................................................................2050.201001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAG---------------C---AGCAGCAACAG---------------------------T---C............................................................2870.141000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC--A-ACATCATCAGCAGCAGCAG.............................................................................................................................2370.141000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--A-ACATCATCAGCAGCAGCAG.............................................................................................................................21140.142000000100000000000000000000000000000001000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-ACATCATCAGCAGCAGCAGC............................................................................................................................21150.132001000000000000000000000000000000000000100000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAC--A-ACATCATCAGCAGCC.................................................................................................................................2280.131000000000000000000100000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACA----------ACA---------------------------------GCAA-------------C------------AGCAAC--A-................................................................................................................................................2080.131000000000000000000000000100000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--A-ACATCATCAGCAGCAG................................................................................................................................18200.102000000000000000000000000000000000020000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-ACATCATCAGCAGCAGCAG.............................................................................................................................20150.071000000000000000000000000000010000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA---------------------------------GCAA-------------C------------AGCAAC--A-ACATC...........................................................................................................................................20180.061001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATCATCAGCAGCAGCAGCA...........................................................................................................................21190.051000001000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAG---------------C---AGCAGCAACAG---------------------------T---.............................................................20200.051001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-ACATCATCAGCAGCAGCA..............................................................................................................................19200.051000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAG---------------C---AGCAGCAA...............................................................................................23200.051000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAGCAGCAGCAG---------------C---AGCA...................................................................................................22200.051000000000000000000000000000000000000100000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCATCAGCAGCAGCAGCA...........................................................................................................................20200.051001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAGCAGCAGCAGCAG---------------C---.......................................................................................................19200.051000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................GCAGCAGCA------------GCAGCCACAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000000000000010000000000000000000000000000
droMoj3
CAACAGCA-----------GCAGCAACAGCAGCAGCAGCAGCAA-----------------------CAG----------------CA---GCAGCAGCAGCA------GC------------------A------G------CAACAGCAG--CAGCAGCAA---------------C------------------AGCAGCAGCAGCAGCA----------------------------------------------------GCAGCAACAGCAGCAGCAGCAGCAGCAGCAGC-------------------------------------------------------------------------AGCAG--------------CAG-C------------AGCAA-C------------------AGCAGCAGCAGCAGCAG-----------------------------------------CA-----------------------------------------------------GCAGCAACAGCAGCAGC---AACAACA---G------CA------------------GCAA---C---AGCAGCAGCAACAGCAGCAA---------------------------CAGCAGCAACAGC---------------------AGC-AACAGCAACAGCAAC---------AACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAA---------------------------CAGC.............................................................19200.204400000
.............................................................................................................................................................................................................CAGCAGCA----------------------------------------------------GCAGCAACAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.204020020
........................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGCAGC-------------------------------------------------------------------------AGCAG--------------CA.............................................................................................................................................................................................................................................................................................................................................24200.153300000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-----------------------------------------------------GCAGCAACAGCAGCAGC---AAC.............................................................................................................................................................22200.153000030
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAA---------------------------CAGCAGC..........................................................22200.102020000
............................GCAGCAGCAGCAGCAA-----------------------CAG----------------C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102200000
.........................ACAGCAGCAGCAGCAGCAA-----------------------CA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000020
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAGC---AACAACA---G------C..............................................................................................................................................20200.102000020
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---G------CA------------------GCAA---C---AGCAGCAGC.......................................................................................................19200.102200000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAA---------------------------CAGCAG...........................................................20200.102200000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---G------CA------------------GCAA---C---AGCAGCAGCAAC....................................................................................................22200.051000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG-----------------------------------------CA-----------------------------------------------------GCAGCAACAGCAGCAGC---AACAAC..........................................................................................................................................................29200.051000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---C---AGCAGCAGCAACAGCAGC..............................................................................................22200.051100000
.............................................................................................................................................................................................................................................................................CAACAGCAGCAGCAGCAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAGCAGCAA---------------------------CAGCAG...........................................................25200.051100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGC---------------------AGC-AACAGCAACAGCA..............22200.051100000
...............................................................................................................................................................GCAA---------------C------------------AGCAGCAGCAGCAGCA----------------------------------------------------GCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
.................................................................................................GCAGCA------GC------------------A------G------CAACAGCAG--CAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAGC---AACAACA---G------CA------------------GC.........................................................................................................................27200.051000010
.......................................................................................................................................................................................................................................................................................................................................................................................................G-C------------AGCAA-C------------------AGCAGCAGCAGCAGCAG-----------------------------------------C..........................................................................................................................................................................................................................................26200.051000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGC---AACAACA---G------CA------------------GCAA---C---AGC.............................................................................................................26200.051100000
........................................GCAA-----------------------CAG----------------CA---GCAGCAGCAGCA------GC------------------A------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
...................................................................................................................................................................................................................................................................................................AGCAGC-------------------------------------------------------------------------AGCAG--------------CAG-C------------AGCAA-C------------------AGC..................................................................................................................................................................................................................................................................................................24200.051100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................G-----------------------------------------CA-----------------------------------------------------GCAGCAACAGCAGCA.....................................................................................................................................................................18200.051000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------------CAGCAGCAACAGC---------------------AGC-AACAGCAAC..................26200.051100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAGC---AACAACA---G------...............................................................................................................................................24200.051000010
................................................................................................................................................................CAA---------------C------------------AGCAGCAGCAGCAGCA----------------------------------------------------GCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACA---G------CA------------------GCAA---C---AGCAGCAGC.......................................................................................................24200.051100000
......CA-----------GCAGCAACAGCAGCAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACA---G------CA------------------GCAA---C---AGCA............................................................................................................18200.051100000
.........................ACAGCAGCAGCAGCAGCAA-----------------------CAG----------------CA---.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
............................GCAGCAGCAGCAGCAA-----------------------CAG----------------CA---.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051001000
.........................................CAA-----------------------CAG----------------CA---GCAGCAGCAGCA------GC------------------A------G------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
............................................................................................................................................................................................................................................................................GCAACAGCAGCAGCAGCAGCAGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAGC---AACAACA---......................................................................................................................................................18200.051100000
....................CAGCAACAGCAGCAGCAGCAGCAA-----------------------CA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGC---AACAACA---G------CA------------------GCA........................................................................................................................25200.051100000
.........................................................................................................................................................................................................................................................................GCAGCAACAGCAGCAGCAGCAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000010
.........................................................................................................................................................................................................GCAGCAGCAGCA----------------------------------------------------GCAGCAACAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051100000
...........................................................................................................................................................AGCAGCAA---------------C------------------AGCAGCAGCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA---G------CA------------------GCAA---C---AGCAGCAGCAAC....................................................................................................23200.051100000
........................................................................................................................................................................................................AGCAGCAGCAGCA----------------------------------------------------GCAGCAACAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG-----------------------------------------CA-----------------------------------------------------GCAGCAACAGCAGCAGC---A...............................................................................................................................................................24200.051010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAG-----------------------------------------CA-----------------------------------------------------GCAGCAACAGCAGCAGC---AAC.............................................................................................................................................................29200.051000010
...................GCAGCAACAGCAGCAGCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
....................................................................................................................................................................................................................................................................................................................................................................................CAG--------------CAG-C------------AGCAA-C------------------AGCAGCAGCAGCA........................................................................................................................................................................................................................................................................................26200.051100000
.......................................................................................A---GCAGCAGCAGCA------GC------------------A------G------CAACAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000010
...................................................................................................................................................................................................................................................................................................AGCAGC-------------------------------------------------------------------------AGCAG--------------CAG-C------------AGCAA-C------------------AG...................................................................................................................................................................................................................................................................................................23200.051100000
...........................................................................................GCAGCAGCAGCA------GC------------------A------G------CAACAGCAG--CA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------------------------CAGCAGCAACAGC---------------------AGC-A..........................19200.051001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---AACAACA---G------CA------------------GCAA---C---AGCA............................................................................................................20200.051000010
.............................................................................................................................................................................................................................................................................CAACAGCAGCAGCAGCAGCAGCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051100000
droWil2
CAACAACA-----------GCAACAACAACTGCAGCAGCAACAA-----------------------TTG----------------CA---GCAACAACAGCA------AC------------------A------G------CAGCAACAA--CAGCAGCAACAACAA---------C------------------------AGCAGCA------------------G-------------------------CAACAGCAGCATCAGCAACAGCAACAGCA---------GCAGCGAAT------------------GCAACAGCAACAGCAA-------------C---------------------------------------------------------AGC----AGCAA---C------------------------AA-----------------------------TTGCAGCAACAACAACA----------ACAGC---AGCAG---------------------CAA----------------CAA---------CAGCAAC--AG-CAACAA---------------------CAACAGCAGCAGCAACAGCAACAA---------------------------C---------------------------------AGC-AGCAGCAGC---AG-----------CASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................................................................................................................................AACAGCAGCATCAGCAACAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.25100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-----------------------------TTGCAGCAACAACAACA----------ACAGC---....................................................................................................................................................................................................................24100.20202000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA----------ACAGC---AGCAG---------------------CAA----------------CA.....................................................................................................................................................................19200.20400040
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACA----------ACAGC---AGCA................................................................................................................................................................................................................20200.20400040
.......................................AACAA-----------------------TTG----------------CA---GCAACAACAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.15303000
............................................................................................................................................................GCAGCAACAACAA---------C------------------------AGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.15300030
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-----------------------------TTGCAGCAACAACAACA----------ACAG........................................................................................................................................................................................................................23100.10101000
................................................................................................................................................................................................................................................................................................................................................................................................................................AA---C------------------------AA-----------------------------TTGCAGCAACAACAACA----------ACAGC---....................................................................................................................................................................................................................27100.10101000
.............................................................................................AACAACAGCA------AC------------------A------G------CAGCAACAA--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10202000
.......................CAACAACTGCAGCAGCAACAA-----------------------TTG----------------C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10202000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAC--AG-CAACAA---------------------CAACAGCAGCA.........................................................................................................25200.10202000
.......................................................................................A---GCAACAACAGCA------AC------------------A------G------CAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10202000
....................................................................TG----------------CA---GCAACAACAGCA------AC------------------A------G------CAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.10202000
.......................................AACAA-----------------------TTG----------------CA---GCAACAACAGCA------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.10200020
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-----------------------------TTGCAGCAACAACAACA----------............................................................................................................................................................................................................................19130.08100010
....................................................................................................................................................................................................................................................................................................................................AGCAACAGCAA-------------C---------------------------------------------------------AGC----AGCAA---C------------------------AA-----------------------------TT.....................................................................................................................................................................................................................................................25160.06100010
............................................................................................................................................................................................................................................................................................................T------------------GCAACAGCAACAGCAA-------------C---------------------------------------------------------AGC----AGC....................................................................................................................................................................................................................................................................................................................24170.06101000
.....................................................................................................................................................................................................................................................................AGCATCAGCAACAGCAACAGCA---------G...............................................................................................................................................................................................................................................................................................................................................................................................................................................23170.06101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACA----------ACAGC---AGCAG---------------------CAA----------------.......................................................................................................................................................................21200.05101000
...........................................................................................................................................................................................................................................................................AGCAACAGCAACAGCA---------GCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------------------CAACAGCAGCAGCAACAGCA................................................................................................22200.05101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAACA----------ACAGC---AGCAG---------------------CA........................................................................................................................................................................................24200.05101000
.....ACA-----------GCAACAACAACTGCAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACA----------ACAGC---AGCAG---------------------C.........................................................................................................................................................................................22200.05101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC--AG-CAACAA---------------------CAACAGCAGCAGCA......................................................................................................25200.05100010
...................................................................TTG----------------CA---GCAACAACAGCA------AC------------------A------G------CAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAC--AG-CAACAA---------------------CAACAGC.............................................................................................................20200.05101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------ACAGC---AGCAG---------------------CAA----------------CAA---------CAGCAAC--A.................................................................................................................................................25200.05100100
.....................................................................................................................................................CAA--CAGCAGCAACAACAA---------C------------------------AGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAA---------------------------C---------------------------------AGC-AGCAGCAG...................24200.05101000
..................................................................................................................................................CAACAA--CAGCAGCAACAACAA---------C------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
.......................................AACAA-----------------------TTG----------------CA---GCAACAACAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.......................CAACAACTGCAGCAGCAACAA-----------------------TTG----------------CA---GC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
........................AACAACTGCAGCAGCAACAA-----------------------TTG----------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAA---------------------CAACAGCAGCAGCAA.....................................................................................................19200.05100010
.....................................................................................................CA------AC------------------A------G------CAGCAACAA--CAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAACAA---------------------------C---------------------------------AGC-AGCAGC.....................26200.05101000
....................................................................TG----------------CA---GCAACAACAGCA------AC------------------A------G------CA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
......................................CAACAA-----------------------TTG----------------CA---GCAACAACAGCA------A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
........................AACAACTGCAGCAGCAACAA-----------------------TT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
...................................................................TTG----------------CA---GCAACAACAGCA------AC------------------A------G------CAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAACAGCAACAA---------------------------.................................................................21200.05100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA---------------------CAACAGCAGCAGCAA.....................................................................................................20200.05100001
..........................................AA-----------------------TTG----------------CA---GCAACAACAGCA------AC------------------A------G------C....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAA---------------------CAACAGCAGCAGCAACA...................................................................................................21200.05100010
.....................AACAACAACTGCAGCAGCAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.AACAACA-----------GCAACAACAACTGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
..................................................................................................................................................................ACAACAA---------C------------------------AGCAGCA------------------G-------------------------CAACAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
................................................................................................................................................................................................................................................................................................................................................................................................................................AA---C------------------------AA-----------------------------TTGCAGCAACAACAACA----------G...........................................................................................................................................................................................................................23200.05101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAA---------------------CAACAGCAGCAGCAACAG..................................................................................................22200.05100010
.......A-----------GCAACAACAACTGCAGCAGCAACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA----------ACAGC---AGCAG---------------------CAA----------------CAA---------CA.........................................................................................................................................................23200.05100010
...CAACA-----------GCAACAACAACTGCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA----------ACAGC---AGCAG---------------------CAA----------------CAA---------CA.........................................................................................................................................................22200.05100010
.......................................AACAA-----------------------TTG----------------CA---GCAACAACAGCA------AC------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
............................................................................................CAACAACAGCA------AC------------------A------G------CAGCAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
...........................................................................................................................................................AGCAGCAACAACAA---------C------------------------AGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAGCAACAA---------------------------C---------------------------------AGC-AG.........................24200.05100010
.......................................................................................................................................................A--CAGCAGCAACAACAA---------C------------------------AGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC--AG-CAACAA---------------------CAACAGCAGCA.........................................................................................................22200.05101000
CAACAACA-----------GCAACAACAACTGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05101000
....................................................................................................................................................................AACAA---------C------------------------AGCAGCA------------------G-------------------------CAACAGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
..........................................................................................................................................................................................................................................................................................................................................AGCAA-------------C---------------------------------------------------------AGC----AGCAA---C------------------------AA-----------------------------TTG....................................................................................................................................................................................................................................................20200.05101000
.......................................AACAA-----------------------TTG----------------CA---GCAACAACAGCA------A......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
....AACA-----------GCAACAACAACTGCAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
.................................................................................................................................................................................................................................................................................................................................AACAGCAACAGCAA-------------C---------------------------------------------------------AGC----AGC....................................................................................................................................................................................................................................................................................................................21200.05100001
....................................................................TG----------------CA---GCAACAACAGCA------AC------------------A------G------CAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
dp5
--GCAGCA-----------CCAGCAACAGCAGCAACAGCAGCAT-----------------------CAG----------------CAGCAGAAGCAGCAGCA---------------------------------GCAACAGCAGCAACAG--CAG---------------------C------------------AGCAGCAGAAGCAGCA------GCA------G-------------------------CAACAGCAGCAACAGCAGCAGCAACAGCA---------GCAGCAGCA------------------AC-------------------------------------------------------------------------------------AGCAA-C------------------AACAGCAGCAGCAACAG-----------------------------------------CA---G----------------------CAGCAACAGCAG----------------------------CAGC---AACAGCA---G------CA------------------GCAA---C---AGCAGCAGCAGCATCAGCAACATCAGCAGC---------------------------AAA---------------------AGC-ATCAGCAAC---AGC---------AGCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................CAGCAGCAT-----------------------CAG----------------CAGCAGAAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2230.3310100000000
.........................................CAT-----------------------CAG----------------CAGCAGAAGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1940.2510100000000
.........................ACAGCAGCAACAGCAGCAT-----------------------C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2080.1310001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................AA-C------------------AACAGCAGCAGCAACAG-----------------------------------------C..........................................................................................................................................................................................................................................21200.1020200000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---C---AGCAGCAGCAGCATCAGCA.............................................................................................23120.0810100000000
...................................................................................................................................................................................................................................................................GCAGCAACAGCAGCAGCAACAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----------------------CAGCAACAGCAG----------------------------CAGC---AACAGC..........................................................................................................................................................23200.0510010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC---AACAGCA---G------CA------------------GCAA---C---AGCAGCA.........................................................................................................26200.0510001000000
.................................................................................................GCAGCA---------------------------------GCAACAGCAGCAACAG--C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
..................................................................................................................................................................................................................GCA------GCA------G-------------------------CAACAGCAGCAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
.........................................................................................................................................................................................................................................................................................................AGCA------------------AC-------------------------------------------------------------------------------------AGCAA-C------------------AACAGCAGC............................................................................................................................................................................................................................................................................................21200.0510100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAG-----------------------------------------CA---G----------------------CAGCAACAGCAG----------------------------CAGC---................................................................................................................................................................27200.0510000000001
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCA---G------CA------------------GCAA---C---AGCAGCA.........................................................................................................22200.0510100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------CA------------------GCAA---C---AGCAGCAGCAGCA...................................................................................................21200.0510000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---C---AGCAGCAGCAGCATCA................................................................................................20200.0510000001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAG-----------------------------------------CA---G----------------------CAGCAACAGCAG----------------------------CA.....................................................................................................................................................................22200.0510100000000
..................................................................................................................................................................................................................................................................AGCAGCAACAGCAGCAGCAACAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................CAA-C------------------AACAGCAGCAGCAACAG-----------------------------------------CA---G----------------------...............................................................................................................................................................................................................24200.0510100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAG-----------------------------------------CA---G----------------------CAGCAACAGCAG----------------------------C......................................................................................................................................................................24200.0510000000001
.....................................................................................................................................................................................................................................................................AGCAACAGCAGCAGCAACAGCA---------GC..............................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----------------------CAGCAACAGCAG----------------------------CAGC---AACAGCA---G------CA------------------...........................................................................................................................27200.0510100000000
...............................................................................................................................................................................................................................................................................................................................AC-------------------------------------------------------------------------------------AGCAA-C------------------AACAGCAGCAGCA........................................................................................................................................................................................................................................................................................21200.0510100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAG-----------------------------------------CA---G----------------------CAGCAACAGC.....................................................................................................................................................................................................23200.0510010000000
..................................................................................................................................................................................................................GCA------GCA------G-------------------------CAACAGCAGCAACAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
..................................................................................................CAGCA---------------------------------GCAACAGCAGCAACAG--CA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
.................................................................................................GCAGCA---------------------------------GCAACAGCAGCAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
.......................................................................................................................................................................................................................................................................................................GCAGCA------------------AC-------------------------------------------------------------------------------------AGCAA-C------------------AACAGCAGCA...........................................................................................................................................................................................................................................................................................24200.0510000100000
......................................................................................................................................................................................................................................................................GCAACAGCAGCAGCAACAGCA---------GCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000001
......................................................................................................................................................................................................................................................................................CAGCA---------GCAGCAGCA------------------AC-------------------------------------------------------------------------------------AGC...........................................................................................................................................................................................................................................................................................................................19200.0510000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAG----------------------------CAGC---AACAGCA---G------CA------------------GC.........................................................................................................................27200.0510000000001
...................................................................................................................................................................................................................CA------GCA------G-------------------------CAACAGCAGCAACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAG-----------------------------------------CA---G----------------------CAGCAACA.......................................................................................................................................................................................................21200.0510000100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----------------------------CAGC---AACAGCA---G------CA------------------GCAA---C---AGC.............................................................................................................23200.0510010000000
...................................................................................................................................................................................................................CA------GCA------G-------------------------CAACAGCAGCAACAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----------------------CAGCAACAGCAG----------------------------CAGC---AACA............................................................................................................................................................21200.0510000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAG-----------------------------------------CA---G----------------------CAGCAACAGC.....................................................................................................................................................................................................24200.0510010000000
........................................................................................................................................................................................................................................................................AACAGCAGCAGCAACAGCA---------GCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAG----------------------------CAGC---AACAGCA---G------CA------------------...........................................................................................................................22200.0510100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---AACAGCA---G------CA------------------GCAA---C---AGCAGC..........................................................................................................24200.0510000000001
................................................................................................AGCAGCA---------------------------------GCAACAGCAGCAACAG--CAG---------------------C------------------A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAG-----------------------------------------CA---G----------------------CAGCAACAGCAG----------------------------CA.....................................................................................................................................................................27200.0510100000000
.......................CAACAGCAGCAACAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAG-----------------------------------------CA---G----------------------CAGCAACAGCAG----------------------------C......................................................................................................................................................................20200.0510100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA-C------------------AACAGCAGCAGCAA.......................................................................................................................................................................................................................................................................................20200.0510000100000
..................................................................................................CAGCA---------------------------------GCAACAGCAGCAACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000010000
.....................AGCAACAGCAGCAACAGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
...............................................................................................................................................................................................................................................................................GCAGCAACAGCA---------GCAGCAGCA------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAG-----------------------------------------CA---G----------------------CAGCAACAGCAG----------------------------CAGC---................................................................................................................................................................26200.0510000000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAG----------------------------CAGC---AACAGCA---G------CA------------------...........................................................................................................................26200.0510001000000
...................................................................................................................................................................................................................................................................GCAGCAACAGCAGCAGCAACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
...............................................................................................................................................................................................................................................................................GCAGCAACAGCA---------GCAGCAGCA------------------AC-------------------------------------------------------------------------------------AGCA..........................................................................................................................................................................................................................................................................................................................27200.0510000000001
....................................................................................................................................................................................................................................................................CAGCAACAGCAGCAGCAACAGCA---------GCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510001000000
.................................................................................................................................................................................................................AGCA------GCA------G-------------------------CAACAGCAGCAACAGCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAG----------------------------CAGC---AACAGCA---G------C..............................................................................................................................................24200.0510000000001
...................................................................................................................................................................................................................................................................GCAGCAACAGCAGCAGCAACAGCA---------GCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510100000000
.....................................................................................................................................................................................................................................................................AGCAACAGCAGCAGCAACAGCA---------GCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000001
...................................................................................................................................................................................................................................................................................CAACAGCA---------GCAGCAGCA------------------AC-------------------------------------------------------------------------------------AGC...........................................................................................................................................................................................................................................................................................................................22200.0510100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---AGCAGCAGCAGCATCAGCA.............................................................................................20200.0510100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---AACAGCA---G------CA------------------GCAA---C---AGCAGCAGC.......................................................................................................27200.0510000000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAG-----------------------------------------CA---G----------------------CAGCAACAGCAG----------------------------CA.....................................................................................................................................................................26200.0510001000000
.........................................................................................................................................................................................................................................................................ACAGCAGCAGCAACAGCA---------GC..............................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
..........................................................................................................................................................................................................................................................................................A---------GCAGCAGCA------------------AC-------------------------------------------------------------------------------------AGCAA-C------------------AACA.................................................................................................................................................................................................................................................................................................22200.0510100000000
..........................................................................................................................................................................................................................................................................................................GCA------------------AC-------------------------------------------------------------------------------------AGCAA-C------------------AACAGCAGCAGC.........................................................................................................................................................................................................................................................................................23200.0510000001000
....................................................................................................................................................................................................................................................................................................GCAGCAGCA------------------AC-------------------------------------------------------------------------------------AGCAA-C------------------AACAGC...............................................................................................................................................................................................................................................................................................23200.0510000100000
droPer2
CAACAGCA-----------GCAGCAGCAGCAACAGCAACAGCAG-----------------------CAG----------------CA---GCCACAAAAGCA------------------------------------ACAGCAGCAGCAA--CAGCAGCAGCAGCAG---------GTGC------------------AGCAGCT-------------------------------------------------ACAAAAGCAGCAGCAACAGCACCAGCAGCAC---------G---A------------------GCATCAGCA------A-------------C------------------------AG------------------CG-------------------------------------------TCAGCA---A-----------------------------------------CAGCAG--CA--------------------GCATCAGCAACAGCATCAGCAGCAT-------------C------------AGCAAC--A-GCATCAG---------------------CAACAGCAGCAGCAGCAGCAGCTA---------------------------CAGCAGCATA----------------------------AGCAGCTGC---AGGAA--ACCA-ACASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................A------------------------------------ACAGCAGCAGCAA--CAGCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.153003000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAG---------------------CAACAGCAGCAGCAGCAGC.................................................................................................24140.071001000
..................................................................................................................................................CAGCAA--CAGCAGCAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000010
...CAGCA-----------GCAGCAGCAGCAACAGCAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051010000
..ACAGCA-----------GCAGCAGCAGCAACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
...................................CAACAGCAG-----------------------CAG----------------CA---GCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---A-----------------------------------------CAGCAG--CA--------------------GCATCAGC.....................................................................................................................................................................................................19200.051010000
droAna3
CAGCAGCA-----------ACAACAGCAGCAGCACCAACAGCAC-----------------------TTG----------------CA---GCAACAGCAGCA------GC------------------A------C------GCACA-----------TCACCAGCA--TGTAGCTGC------------------CGT-GTTGCAGCAGCA------GCA------G-------------------------CAACAGCAGCAACCGCATGCACTCCATCA---------GCAGCATGG------------------ACAGCAGCAACATCAT-------------G--------------------------------------GCCA--------------------------T---AACCAGCA------CCAGCAC--------------------------------CATTCC---------CACCA----------GCAGC---AGCAG----------------------------------------CAGC---------AACAAC--AG-CA------------------GCAG---CAACACCATCACCAACAACAACAC----------------------------------------------------------------GCTCAGCAGC---AGC---------AACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...............................................................................................................................................................TCACCAGCA--TGTAGCTGC------------------CGT-GTTGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000001
......................................................................................................................................................................................................................................................................................CATCA---------GCAGCATGG------------------ACAGCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAC--------------------------------CATTCC---------CACCA----------GCAGC---A...................................................................................................................................................................................................................2111.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--AG-CA------------------GCAG---CAACACCATC..........................................................................................................1980.131100000
.............................................................................................................................................................................................................CAGCAGCA------GCA------G-------------------------CAACAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102020000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC---AGCAG----------------------------------------CAGC---------AACAAC--AG-C..............................................................................................................................................22200.102200000
...CAGCA-----------ACAACAGCAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC---AGCAG----------------------------------------CAGC---------AACAAC--AG-CA------------------GC.........................................................................................................................26200.051001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------GCAGC---AGCAG----------------------------------------CAGC---------AACAAC--AG-CA------------------GC.........................................................................................................................27200.051010000
droBip1
CGTTGATG-----------TGGTCGACTGCAGTGACT-CGGAAA-----------CGCCGGCGGCAACTG-------------GAGCA---GCAGCA---------------------------------------GCCACTGCAGCA-----------ACAGCGA------------A------------------CGCAGCAGCGGCGGCG------------GCAGCAGCAGCAT-------------------------------T-------------GCAG------------GC------------------GCAACAGCA------AGCGCGTCAGG---------------CA----------TTG--------------CGT-G---TT--G-CACAG---------------------------------------------------------------------------------CAACA----------TCAGC---AG------------------------CAG----------------CAG---------CAGCAAC--AG-CAACAA---------------------CAACAACAACAGCAAAGGCAACAG------------ACACATCACCA------------------------------------------CGCAACGGC---AA--ACA--AGCAACSizeHit CountTotal NormTotal
No Reads
droKik1
CAGCAGCA-----------GCAGCATTTACAGCAGCAGCAACAA-----------------------CAG----------------CA---TCTACAGCAGCAGCA------------------------------A------CAACAGCAT--TTACAGCAGCAGCAG---------CAGC------------------AGCATTT-------------------------------------------------ACAGCAGCAGCAGCAACAGCATCTACAGCAG-------------------------------------------------------------------------CAGCAGCAACATCAC------------------CA------GCAGCAAC-------------------AAC------AAC------AG-----------------------------------------CA---T----CTACA----------------------------------------GCAGCAACAGCAGC---AGCTGCAGCA---A-CA--TCT------------------ACAGCAGCAACAGCAGCAGCATCATCTACAG---CAGCAGC---------------------------AGC-------------------AT---CTACAGCAAC---AGC---------AGCSizeHit CountTotal NormTotal
No Reads
droFic1
CCTCAGGT-----------GATGCAACAACAACTGCAACAGCAACA--------------ACTGCAACAG----------------CAGCAGCAGCA---------------------------------------A------CTACTGCAA--CAACAGCAACAACTG---------C------------------------A----------------------------------------------------ACAGCAGCAGCAGCAACAGCAGCAACAGCACCAGCAGCAAC------------------------------------------------------------------------------------------AACT-GCAGCAGCAGCAACAGC-------------------AGCA---------AC---AG-----------------------------------------CAGCA----------GCAGC---ACCAGCAGCAACTGCAG----------------------------CAGC---------AGCAAC--A-GCA------------------G---------------CA---GCAA------------------C------AGCAGCAAC------AAT----------------------------TGCAACAGC---AGCAA--CCCTTGCASizeHit CountTotal NormTotal
No Reads
droEle1
CATCAGCA-----------GCAGCAGCAGCAACAGCAGCAGCAG-----------------------CCA----------------CC---GCCGCCATCGCA---GCAGC---AGCAACAGTTGCATCAGCTCAAGTCACCGCAGCA------------------------------------------------------------------------------------------------------------ACATCAGCAGCAGCAATTGCAGCAGCAGCAC---------------------------------------------CAG-------------C---------AGCAGCAGC---------------A-G-CAACAC-CA------CCAGCAGC-------------------A------------------G-----------------------------------------CA-------------GCAGCAGCATCAG----------------------------------------C------------AACA------AC------------------------------ACCAGCAGCAACATCACCAG---CAGCAGCAAC------AG------C---------AGCAGCAGCAAAACGAATCGGATG---TCATACC--C-------ATT--AGCACGSizeHit CountTotal NormTotal
No Reads
droRho1
CAGCAGCA-----------GTTGCAGCATCAGCAGCAACAGCAA-----------------------CCGTCGCCCATGTTGGGCAGA---CCG---GCAGCAGCAA---C------------------ACCCACAG-----------------ATA-TGCAGCGATAT---------GTGC------------------AACGGAT---ACAGCAGAATTA------T------CAGCAC-------CTACAGCAA---------------------------------------CATCAGCAGCAACAGCAGCAGCAACAGCAGCA------A----------------------------------------CATCAGCAG-C-AACAG-CA------G----------------------CAGCAGCA---------------A-----------------------------------------CAGCA----------GCAGC---AGCAG-------------------------------CAACAGCAGC--------------------AG----------------------------CAACAGCAGCA-CAACAGCAGCAG---------------------------C---------------------------------CAC-AGCAGCAGC---AG-----------CASizeHit CountTotal NormTotal
No Reads
droBia1
CAACACTC-----------GAGGCGGCAGCGGCAGCAGCAGCAA-----------------------CGT----------------CT---GTGGCAGCAGCA---ACACC---AGCAACTGTAGGAGCAACATCAGCAACAGCAACA-----------ACAACAA------------C------------------TGTAGCAGCAACAGCA----------------------------------------------------------GCAGCAACACCA---------AC----------------------------------------------------------------AACTGTAGG---------------A-G-CAACAT-CA------GCAACAGC-------------------AAC------AAC------AA-----------------------------------------CA---A----CTGTA----------------------------------------GCAGCAACAGCAGC---AGCGATATCA---A-CA--ACT------------------GTAGCAGCAACAGCAGCAGCGATATCAACAA---------------------------C---------------------------------TG-TAGCAGCAGC---AGC---------AACSizeHit CountTotal NormTotal
No Reads
droTak1
CAGCAGTT-----------GGAGAAGCAGCAGCAGCAGCAGTAT-----------------------CAG----------------GAACAGCA---GCAA---------C------------------AGCTATATCAACAGCAGCAATAT--CAGCTGCAACTGGAGA---------AGCA-----GCAACTGGA-------------AAA-------------------------------------G------------CAGAAGCATCCATACCAGCA---------GCAACTGGA------------------AA-------------------------------------------------------------------------------------AGCAC-C------------------AGCAGCAGCAACAACAA-----------------------------------------CTACA----------TCAGC---AGCAG----------------------------------------CAGC---------AACAAC--AG-CA------------------GCAA---CAACAGCAGCAGCAGCAA------------------C------AT------C---------AGCCTCAA---------CCGC-CA---ACTCAGCAAC---AGCAA--CCCATTCCSizeHit CountTotal NormTotal
No Reads
droEug1
CAACAGAA-----------AATACAGCAGCAGCAGTATCAAGAG------------------------------------------CA---GCAGCAACAGCT------------------------------ATATCAACAGCAACAATAT--CAGCTGCAACTGGAGA---------AGCA-----ACAACTGGA-------------AAA-------------------------------------G------------CAAAAGCATCCATACCAGCA---------GCAACTGGA------------------AAAGCAGCA-------------------------------------GC---------------------------A----------------------GCAACATCAGCAGCA------AC------AA-----------------------------------------CAACA----------TCAGC---AGCAA----------------------------------------CAGC---------AACAT------C------------------------------AGCAGCAGCAACAACATCAC---CAGCAGCAAC------AT------C---------AACCTCAA---------CCGC-CA---ACTC---------AGC---------AGCSizeHit CountTotal NormTotal
No Reads
dm3
CAGCAGCA-----------AATGCAGAAGCAACAGCAAATACAG-----------------------CAT-CAGCAATAT------CA---GGAGCAGCAGCAGCAA---C------------------AACTATATGAACAGCAGCAGTAT--CAGCTGCAATTGGAGA---------AGCA-----GCATCTGGA-------------TAA-------------------------------------G------------CAAAAGCATCCGTACCAGCA---------GCAACTGGA------------------AAAACAGCA------A--------------------------------------------------------------------------------------------------CAGCAGCAGCAA--------------------------------------------CAGCAG--CA--------------------GCAACAACATCACCAACAGCAACAC-------------C------------AACAAC--A-ACA------------------------------CCAACAGCAACAA------------------CATCAGCAACAC---C---------------------------------AAC-AGCAACA--------------TATACASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................A---------GCAACTGGA------------------AAAACAGCA------......................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
...........................................................................................GGAGCAGCAGCAGCAA---C------------------AACT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------------------CCAACAGCAACAA------------------CATCA...........................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................AT------CA---GGAGCAGCAGCAGCAA---C------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................CAGCA------A--------------------------------------------------------------------------------------------------CAGCAGCAGCAA--------------------------------------------CA.........................................................................................................................................................................................................................................20200.2550000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAA--------------------------------------------CAGCAG--CA--------------------GCAACAA......................................................................................................................................................................................................21200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000010
..............................................................................AT------CA---GGAGCAGCAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18110.1820000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................AACAGCA------A--------------------------------------------------------------------------------------------------CAGCAGCAGCAA--------------------------------------------CAGCAG--C..................................................................................................................................................................................................................................2760.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAA------------------CATCAGCAACA.....................................................................2060.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAA--------------------------------------------CAGCAG--CA--------------------GCAACAACA....................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000020000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA--------------------------------------------CAGCAG--CA--------------------GCAACAACATC..................................................................................................................................................................................................2280.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAA------------------CATCAGCAAC......................................................................1990.1110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................A------A--------------------------------------------------------------------------------------------------CAGCAGCAGCAA--------------------------------------------CAGCAG--C..................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--------------------------------------------CAGCAG--CA--------------------GCAACAAC.....................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAA--------------------------------------------CAGCAG--CA--------------------GCAAC........................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAA--------------------------------------------CAGCAG--CA--------------------GCAA.........................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................ACAGCA------A--------------------------------------------------------------------------------------------------CAGCAGCAGCAA--------------------------------------------C..........................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAC---C---------------------------------AAC-AGCAACA--------------......18120.0810000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................AT------CA---GGAGCAGCAGCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................17140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................A---GGAGCAGCAGCAGCAA---C------------------A..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.......................................................................................A---GGAGCAGCAGCAGCAA---C------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................ACAGCA------A--------------------------------------------------------------------------------------------------CAGCAGCAGCAA--------------------------------------------CA.........................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAA--------------------------------------------CAGCAG--CA--------------------GCAA.........................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA--------------------------------------------CAGCAG--CA--------------------GCAACAACA....................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAA--------------------------------------------CAGCAG--CA--------------------.............................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................CAGCA------A--------------------------------------------------------------------------------------------------CAGCAGCAGCAA--------------------------------------------C..........................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAA--------------------------------------------CAGCAG--CA--------------------GCAACAAC.....................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA--------------------------------------------CAGCAG--CA--------------------GCAAC........................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA--------------------------------------------CAGCAG--CA--------------------GCAACAAC.....................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAA--------------------------------------------CAGCAG--CA--------------------GCAACA.......................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................AACAGCA------A--------------------------------------------------------------------------------------------------CAGCAGCAGCAA--------------------------------------------C..........................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................A------A--------------------------------------------------------------------------------------------------CAGCAGCAGCAA--------------------------------------------CAGCAG--CA--------------------.............................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................GCA------A--------------------------------------------------------------------------------------------------CAGCAGCAGCAA--------------------------------------------CAGCAG--CA--------------------.............................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................AACAGCA------A--------------------------------------------------------------------------------------------------CAGCAGCAGCAA--------------------------------------------CA.........................................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAA--------------------------------------------CAGCAG--CA--------------------GCAACA.......................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................AGCA------A--------------------------------------------------------------------------------------------------CAGCAGCAGCAA--------------------------------------------CAGC.......................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAA--------------------------------------------CAGCAG--CA--------------------GCAACA.......................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAA--------------------------------------------CAGCAG--CA--------------------GC...........................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................CAGCA------A--------------------------------------------------------------------------------------------------CAGCAGCAGCAA--------------------------------------------CAGCAG--C..................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................A--------------------------------------------------------------------------------------------------CAGCAGCAGCAA--------------------------------------------CAGCAG--CA--------------------GCA..........................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAA--------------------------------------------CAGCAG--CA--------------------GCA..........................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................A------A--------------------------------------------------------------------------------------------------CAGCAGCAGCAA--------------------------------------------CAGCA......................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
droSim2
CAACAGTC-----ACCGCAGCAACG-----TCCACCAACAGCGATATCG------------------CCG----------------CT---GGCTCAGGTGCA---------------------------GCAGCAGCAGCAACAGCA-----------GTTGCAA------------C------------------AGCAGCAGCAACAGCT-------------------------------------------C---------------------CAGCAGCTG-------------------------------------------------------------------------CAGCAACAGCAGTTC-----------CAGCAG-CA------ACAACTGCAAC-AACAG---C---------AGTTCCAGCAACAA--------------------------------------------CAGTTGCA-------GCAACAGCAACTG----------------------------------------C------------AGCA------------------------------------ACAGCAGCAGCAACAGCAACAG---CTGCAGCAAC------AG------C---------AGCAGCAA---------CCGG-CA---TCTCA------------ATC--AGTACCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................GCAA------------C------------------AGCAGCAGCAACAGCT-------------------------------------------C---------------------CAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000100000
.....................................................................................................................................................................A------------C------------------AGCAGCAGCAACAGCT-------------------------------------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1861.00600000600000000000
................................CACCAACAGCGATATCG------------------CCG----------------CT---G........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAC------AG------C---------AGCAGCAA---------CCGG-C................................2111.00100010000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------C---------AGCAGCAA---------CCGG-C................................1620.50100000010000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------ACAGCAGCAGCAACAGCAAC..............................................................................................21200.05100000000000100000
.......................................................................................................................................................................................................................................................................................AGCAGCTG-------------------------------------------------------------------------CAGCAAC.....................................................................................................................................................................................................................................................................................................................................................................15200.05100000000001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------------------------ACAGCAGCAGCAACAGC.................................................................................................19200.05100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAACTG----------------------------------------C------------AGCA------------------------------------..................................................................................................................18200.05100010000000000000
droSec2
CGCCACAGGAGGCG-----GCGGGGCAGGTGCCACCAGCAACAATGGCGTGAATGCA-----------------------TGGGC------CTTGCAGCAGCAGCAACA--------AACCGCCG------C-CCTGCACCATCAGCA-----------ACAGCAG---------------------------------------CAGCAGCA------GCA------T-------------------------CAACAGCAGCAAC------------ACCA---------AC----------------------------------------------------------------AGCACCTAC---------------A-G-CAACAC-CA------TCAAGCGC-------------------A------CCATCAG-----------------------------------------------CA---T----GTCCT----------------------------------------GCAGCAGCAGCAGCAGC---AACAGCA---G-CA--CTC------------------CCAGCATCAGCAT---CAGCAGCAACATCAC------GGCC---------------------------ACC---------------------CGC-TGCATCCGC---ATC---------ATASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................CATCAGCA-----------ACAGCAG---------------------------------------CAGCAGCA------GCA------T-------------------------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.5010100
............................................TGGCGTGAATGCA-----------------------TGGGC------CTTGCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2620.5011000
...........................................................................................................................................CCATCAGCA-----------ACAGCAG---------------------------------------CAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2130.3310001
.............................................................................................................................................................................................................CAGCAGCA------GCA------T-------------------------CAACAGCAGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2280.1310001
..................................................................................................................................................................................................................................................................AGCAGCAAC------------ACCA---------AC----------------------------------------------------------------AGCA..........................................................................................................................................................................................................................................................................................................................................................................19180.0610001
droYak3
CGCCGCCG-----------GAG-GAGGTGGAGGAGGAGGAGGAG-----------------------GAG----------------GA---GTTGGAGCAGGCGGG------------------------------G------CAGCCGCGAA-------------------------------------------------CGGCAGCAGCA------------GCAGCAACAGCAGCGGAGGCGGA--G------------CAGTCGGCACCAC-TCATCA---------TCAGCACCA------------------AC-------------------------------------AGC------------AC----------C-ACCA--------------------------G---CATCACCATCA---TCCGA------AT-----------CATCTGCATCAGCATCAGTCT---------CATCAA----TTGCC----------------------------------------GCAGCAGCAGCAGC---------------AAC--A-------------------------------------------GCAG------------------C------AG------C---------AAGCACAT---------CAGG-CG---GCACAGCAGG---AAC---------ACCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................GAGGTGGAGGAGGAGGAGGAG-----------------------GAG----------------GA---G........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2720.50100000100000
.......................GAGGTGGAGGAGGAGGAGGAG-----------------------GAG----------------..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.33100000100000
.....................G-GAGGTGGAGGAGGAGGAGGAG-----------------------GA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2430.33101000000000
.........................GGTGGAGGAGGAGGAGGAG-----------------------GAG----------------G.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.20101000000000
...................GAG-GAGGTGGAGGAGGAGGAGGAG-----------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2460.17100000100000
.......................................................................................................................................................AA-------------------------------------------------CGGCAGCAGCA------------GCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18190.05101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGC---------------AAC--A-------------------------------------------GCAG------------------C------.........................................................................22200.05101000000000
..........................GTGGAGGAGGAGGAGGAG-----------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05101000000000
.............................................................................................................................................................................................................CAGCAGCA------------GCAGCAACAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000000000
droEre2
CAACGGCG-----------GCGGCTGCAGCTGCAACAGCAACAG-----------------------CTG----------------CC---GCGGCGGCAGCT------GCAGCAGTGGT---------GGCCCTGCCGACGGCATC--------------------------------------------------------AGCAGCA------------------GCCGCAGCG--------------------------------------CCGCAGCAGC---------ACGC-GG------------------CCTACGG--ACAGCAG----------CAGCAGCAGCAGCAGCCGCAGC---------------A-G-CATCTC-CA------GCAGCAGC-------------------AGC------AAC------AT-----------------------------------------CT---T----GGCCA----------------------------------------GCACCACCAGCAAC---ATCCGCAGCA---A-CA--CGC------------------GCAGCAGCAGCAG------------------------------------------------------------CAA---------CTGA-TG---ACCC---ATC---AGC---------AGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
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Generated: 05/17/2015 at 10:21 PM