ID:

dgr_335

 Coordinate:

scaffold_15110:17754996-17755146 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dgri_GLEANR_14542:2]; CDS [Dgri\GH14683-cds]; intron [Dgri\GH14683-in]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey-

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GCAGACATCGTCGGGCGTTGGCCTCATCAGCAGAAGTCGCAGCAATTTGCGTGAAATTTGTAAAACGCATGCAATTTGCTAACAACAATTGATTGCCCCGACCGAAGGAGCTACAGCAACAGCAGCAGCAGCAACAACAGCACTAACAACAACAGCCACAACAACATTAAGTAGTAGTGTTCCGGTTAACAGCTTAAAAGCAACAGCACCAACAACAACAACAACATCAACTACAGCAGCAACAACAACAA
**************************************************................((.(((...(((((..............((.((.......)).))...)))))..)))))(((...(((...((((((.((.((....................)).))))))))...)))....))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total M041
female body
...............................................................................................................TACAGCAACAGCACCAGCAGCA...................................................................................................................... 22 1 20 0.05 1 1
.CAGACAGCGTCGGGCGCG........................................................................................................................................................................................................................................ 18 3 20 0.05 1 1

Anti-sense strand reads

CGTCTGTAGCAGCCCGCAACCGGAGTAGTCGTCTTCAGCGTCGTTAAACGCACTTTAAACATTTTGCGTACGTTAAACGATTGTTGTTAACTAACGGGGCTGGCTTCCTCGATGTCGTTGTCGTCGTCGTCGTTGTTGTCGTGATTGTTGTTGTCGGTGTTGTTGTAATTCATCATCACAAGGCCAATTGTCGAATTTTCGTTGTCGTGGTTGTTGTTGTTGTTGTAGTTGATGTCGTCGTTGTTGTTGTT
**************************************************................((.(((...(((((..............((.((.......)).))...)))))..)))))(((...(((...((((((.((.((....................)).))))))))...)))....))).......************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droGri2 scaffold_15110:17754946-17755196 - dgr_335 GCAGA--C--ATCGTCGG--GCGTTGGC---------CTCA---TC-------------------------------------------------------AGCAG------------------------------AA-GTCGCA---------------------G---CAATTTG----C-----------GTGAAATTTGTAAAACGCATGCAATTTGCTAACAA-----------------CAATTGATTGCCCCGACCGAAGG----------------------------------------------------------------------------------------------------------------------------------AG---------------------------------------------------------------CTACAGCAACAGC---AGC------AGC------------------------------------AGCA------------A------CAACAGCACTAAC---------------------A------ACAACAGCCACAA-------------------------------------CAACATTAAGTAGTAGTGTTCC---GG---TTA----------ACAGCT---TA------------------AAAGCAACAGCACCAACAACAACAACAACATCAA---------------------------------------------------------------CTACAGCAGCA------------------------------------AC---AACAACAA
droVir3 scaffold_13049:19593354-19593589 + GCAGC--C--ATCGTCAG--GCCTTGGCCT---------CG---TC------AGCTCGTC-----------------------------------------------------------GGCGA------------CTTCTCGCA---------------------G---CAATTTG----C-----------GCGAAATTTGTAAAACGCATGCAATTTGATAACAG-----------------CAATTGATTGCCTCTACCGAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C------AGCAGCAACAACAGTGGCAACAACAGCAGCAA------------------------------------------------------------------------------ACACCA-------------------------------------CAACAATAAGTAGTAATGTGCC---GG---TTA----------ACAGCT------------------------------CAGCAGCAACAACATCAACTACTGCAA---------------------------------------------------------------CAACAACATCA------------------------------------AC---AAGAACAA
droMoj3 scaffold_6680:7305486-7305730 + GCAGT--T--ATCGTCAG--GCCTTGGCCT---------CA---TC------AGCGCTTC-----------------------------------------------------------GGCGA------------CTTCTCGCA---------------------G---CAATTTG----C-----------GCGAAATTTGTAAAACGCATGCAATTTGCTAACAG-----------------CAATTGATTGCCTCGACCGAAGC----------------------------------------------------------------------------------------------------------------------------------AG---------------------------------------------------------------CAA------CAAC---AGA------------------------AACAGCAGCAGC---------AA---------------------------CACCAAC---------------------------------------AA-------------------------------------CAACAATAAATAGTAATGTGCC---GG---TTA----------ACAGTTCAGCA------------------GCAACAACATCAACAACAACAATAACAACATCAA---------------------------------------------------------------CGACAGCAACA------------------------------------AC---ATCAACAA
droWil2 scf2_1100000004511:364008-364227 + GCAAC--TGCAA---CTGCAAC--TGGT---------CTCA---TC-------------------------------------------------------GTTCA------------------------------GA-GTCGCA---------------------G---CAATTTG----C-----------GAGAAATTTGTAAAACGCAGGCAATTTGCTAACAA-----------------CAATTGCCTGCCTCAACCTCAAC----------------------------------------------------------------------------------------------------------------------------------CT---------------------------------------------------------------CA---------AC---ATC------------------------AACAACAGCAGC---------AACA------------A---------------------------------------------------------CAA-------------------------------------CAACAATAAGTAGTAATGTGCC---CG---TTA----------ACAGTT---CA------------------------GCAGCAACAACAACAACATCAACAACAA---------------------------------------------------------------CATCAGCAACT------------------------------------AC---GTCAACAA
dp5 XL_group1e:8487996-8488235 - GG------------CCAG--ACCTCGTTCT---------CA---GC---------CC--------------------------------ACATGTT-TGGCAACA------------------------------------------------------------------------------------------TGAATCAGTCCAGCTCATCCTAGCTGCCAACTAAACGCAATTCCAATTCATAATTCGCCGCCGCCGCCGCAGCAG---------CCACAGTC----------------------------------------------------------G--------------CA---CA----------------------A-CAA------------------------------------------------------------------------------CAAC---AAC------AAC---------------AACAACAGCAGCAA------CAGCA------------------------------------------------------------GCAACAGTTGCAA-------------------------CAGCTGCAA---C-------------------------------------------------TGCA------------------ACAGCAACAGCAGCAGAATCAACAACAACAACAA---------------------------------------------------------------CAACAGCAACA------------------------------------GC---AGCAGCAA
droPer2 scaffold_5:787487-787721 + GCAAA--T--GATGTCC------AAGATGA---------CG---GC------AGCACATC-----------------------------------------------------------AGCAG------------CA-TCAACA---------------------T---CAG----------------------------------------------------------------------------------------------------------CAACAAGTGCACC-------------------AGTTTATGCA---------------CCAG-------CAAAT---------GTTGCA----------------------A-CGACAGCAG---------------------------------------------------------------C------------------------ATC---------------AGCAACAGCAGC------AGCAACA------------ACAA------CAG---------------CAGCAGCATTTGCAACAGCAGCAGC------AAC-ATGGACATCC------------------------GCA----------------------TGG---ACA----------AC-----AGCA------------------GTCGCAACAGCATCAGCAGCAGTCGCAGCTCCAT---------------------------------------------------------------GGACAGCAGCA------------------------------------AC---ACCAACTG
droAna3 scaffold_13340:4279218-4279437 - ACAAC--ATTGT---CGCCGGC--A-GTC-----------ATGACC------AGCTCGCC-----------------------------------------------------------AA----------------------------------------------------------------------------TGT-------------------------------------------------------------------------------------------------------------------------CGCTGTCATGCATCC--AACATACGGCAGT---------------TG-C---------------CACAA-CAACAATAG---------------------------------------------------------------CA---------AC---AGC------------------------AACAGC---AAC------AGCAATAACAACAACAACAGCAG------TAGC---------------------------A------GCAGCAGCCACAA----------CAGCAATT------------------GCAA---------------------------TCA----------GCAA---ATCA------------------GCAACTACAGCAATAACAATAACAGCAACAGCAA---------------------------------------------------------------CAACATCAGCA------------------------------------AT---AGCAGCAA
droBip1 scf7180000395954:75113-75338 - CCAGAGCA--AT---CAG---------A--------TGGCG---GC-C-----GC-------------------------------------------------------------------CG-----------------------------------------------------------------------------------------------------------------------------------------CTG--------------------------------------------------------------------------------CTCGCGA------------ATCG-C-TGCTTAATTCGTATCT-------------GTATCAGAAGGATGGCGATTATATGTCGGAGCAGGGCTACTGGCAG---------------------------CAGC---ATC------------------------AGCATCACCAGCAGCAACAGCAACA------------------------------------GC---------------A------GCAA-------------------CAGCAACAGAATCAGCAGCAGCAG---C-------------------------------------------------AACA------------------CCAACAACAGCAGCACCAACAACAGAAACATCTA---------------------------------------------------------------CAACAGCAGCA------------------------------------AC---AGCAACAA
droKik1 scf7180000302441:2840807-2841059 - GCTGG--TACAG---CAACAACCTCAGCCTGGACAGGCTCA---GC-------------------------------------------------------------------------------------AGCAGCA-GCAGCA---------------------A---CAAGTTA----T-----CACCCAGCGACATGTAATAAACACAT-CAACGGCCCAAGGA-----------------CAACAGATAA---------------------------------------------------------------------------------------------------TCCAAAGTCTTCAA--------------------------------------------------------------------------------------------------------CAGA---AGC------AGC------------------------------------AGCA------------A------ATGTTGCATGTTC---------------------AACAACAGCAACAGCCACAA-------------------------------------CAACAGCAACTTC-------CTCAGGG----------------GC-----AGCA------------------ACATCCCCAACAACAACAACAACAACAGCAACAA---------------------------------------------------------------CAACAGCAGCA------------------------------------AC---AACCGCAG
droFic1 scf7180000454072:1320648-1320888 + GCAAC--ACCTG---CGGCAGCG---GG----------------------------------------------------------------------------------AGCTGCAGCTGCAG------CAGCAGCA-GCATCA---------------------G---CTAGGAA----------TGGCCAGCGACGT-------------------------------------------------------------------------------------------------------------------------CGCGTGGAAGCA---GCAACAGAAG---------------GCTGCAA-C---------------GGCAA-C------AT---------------------------------------------------------------C---AACAGTAAT---AGC------------------------AACATC---AAC------------A------------GCAA---------CAGCAACGGCAACAGCAA------------CAGCAACAGCA---ACAT----------CGGCAACT------------------GCAACACCAA----------------------------------GCTT---------------------------GGCAGCAGCAACAGCAACAGCAACAACAACAA---------------------------------------------------------------CAACAACAACA------------------------------------AC---AACAACA-
droEle1 scf7180000491280:1873891-1874135 + GCAGA--AT---TTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGTCAACAACA-------------GCAACAGGAGTACAACAATTGCTTGCCTATTAATTATTATCAACAACAGCAGCAGCAACAGCAAC---------AAC---AAC------------------------TACAGC---AGC------AGCAGCA------------GCAGCAACAACAGCAACCGC---------------------AACAACAGCAAC------AGCCAATGACAGCT------------------------A----------CAA------------CGACAGCAGCCTCATGCAATGCCACAACA------------------GCAGCAACAACAACAGCAACAACAGCAACAACAG---------------------------------------------------------------CAACAGCAGCA------------------------------------GC---AACAACAA
droRho1 scf7180000779204:88028-88259 - GCAGC--CGCAAGGTCAG---------G--------GACCG---TC-G-----TC-----------------------------------CCAGC------------------------AGCAG---CAGCAGAAT-------TTGCATCACCATCAACAGCAG-------------------------------------------------------------C-----------------------------------------------------------------------------------------------------------------------------------------AGCA-AC---------------ACCAA----------------------------------------------------------CAGCAGCAG---------------CAGC---AGC------------------------AACACC---AAC------------AGCAGCAGCATATGCAGCAGCAACAGCAGCAGC---------------------AACATCAGCAG-------------------CAG------------------------CAACATCAA-CAG------------CAGCAGCA----------GC-----ATCA------------------ACAGCAGCAGCAGCAGCAGCATCAGCAGCAGCAA---------------------------------------------------------------CAACATCAGCA------------------------------------GC---AGCAACAA
droBia1 scf7180000302075:432020-432237 + GCAAC--A--AG---TGG---------G--------GGACA---GC-T-----GC-----------------------------------CAGGT------------------------GACA-------------------GCA---------------------A---CAAT----------------------------------------------------------------------------------------------------------------------------------------------------ATTGTGAAGTATCC--CTAAAGCGCTCAA------------AGCA-AC---------------AGT-------------------GA---------CAGCAGCAACAA---------------------------CAGCAGCAACAGCAATAGC---AGC------AG------------------C------------------ATCA------------G------CAGCAGCAGCAACAACAACAGCAA----------------------------------------CAG------------------------CAA-------TAGTAA---------T------A----------GC-----AGCA------------------GCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAG---------------------------------------------------------------CAACAGCAGCA------------------------------------AC---AACAGCAA
droTak1 scf7180000415158:217904-218161 - GAAGA--ACCAG---CGGGAGC-----------------CA---GC-A-----G-------------------------------------------------------------------------CAGTGAGTA-------TG------------------AATCCAACG--CAGTTCACCATTCCGCGGAACGGCGT------------------------------------------------CTT-------------------CATAGCCGTCAACGAGTGGTCG-------------------GAGCCGATGG---------------CCAA-------CAGCTCCTCC---------A----------------------ATAGTCACCAGCATCATAGT------------------------CATCATCATCATCACCACCAC----AATCACC---------AT---CATCACAGCAGC------------------------AGC---------AACAATAGC------------------------------------------------------------------AA-------------------------------------C-------------------------------A----------AC-----AGCA------------------GTAGCAACAGCAACAGCAACAGCAACAGCATCAA---------------------------------------------------------------CAACAACAGCA------------------------------------GC---AGCAACAG
droEug1 scf7180000409064:13462-13712 - TCGGC--AT---GACCGG---------A--------TT-CG---ATGGTCTGAATATGACAGCGGCCTCAGCATTCCTCGATCTAGAGCACACGCTCCAGCAGCAACAAATG-----------------------------------------------------------------------------------------------------------------------------------------------CCGCAAAT----------------------------------------------------------------------------------------------------------------------------------GCAGTTG---------------------------------------------------------------CA---------GC---AGC------------------------AACACC---AGC------AGCAGCA------------ACAA------CAA---------------CAGACGCACCAGCAACAACATCACC------AGC-AAACACAGCAGCAACTAACT------------------------------------C---AA---CTA----------ACGCAACAACTGCA---------------ACATCTC---CATCAGCAGCAACATCAACAGCAA---------------------------------------------------------------CTACATCAGCA------------------------------------GC---AACAACAG
dm3 chr3R:622237-622477 - GCAAT--ACCGT---T------------------------------------------------------------------GTAGTTGCCGTGCGTCATCAGCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGTTG------------------------CAA------CAGCAGCAGCAGCAACAGCAGC---------AACTGGCTTTAC---------------------ATCATC---AGC---------ATCA------------G------CAGCAG-------------------------------------------------------------------------------------CAGCATCAG---C-------AACAGCAGCAGCA----------GC-----ATCA------------------GCAGCAGCAGCATCAGCAACAGCAGCGT---GCCACTCTCGTGCAGCCAGGATTCTTGTTCAGCTATCGCAGCAATCAACCCCAGCAGCAACAGCAACCAGCGCAGCA------------------------------------AA---TACATCA-
droSim2 x:3448018-3448249 + ACAAC--C--ATCGCCC------ATGTTG------GGCAGA---CC-------------------------------------------------------AGCAG------------------------------CA-GCCACA---------------------G---CAGATA---------------------------T----------------------------------------------------------------------------------------------------------------------GCAGAGATACG---TCCAGAGGAT---------------GCAGCAA-C---------------AGC----------------------------------------------------------------------------------AACAGC---AGC------------------------AGCAACAGCAGCAG------CAGCA------------GCAA------CAG------------C---------------A------GCAGC-------------------AGCAA---------------------C-------------------------------------------------TACAGCAGCAGCAACAGCAGCATCAACAC---CAGGAGTTGT---------ACCGC---------------------------------------------------------------CAGCAGCAGCTACATCGCACTAGTATGAGCGGCATAGCCAGCCAGCAACACTTGCAGCAA
droSec2 scaffold_44:20652-20870 - TCATT--C--CTCGAT------------------------------------------------------------------CTGGAGCACTCGCTTCAGCAGCAGCAGATGC---------AGCAGATG-------------------------CAATTGCAG-------------------------------------------------------------C-----------------------------------------------------------------------------------------------------------------------------------------AGCA-AC---------------ACCAT----------------------------CAGCAGCAGCAG---------------------------CAGACGCACCAGCAACAGC---AGC------------------------AACACCAGCAGCAA------------------------------------CACCACCAACAGC---------------A------GCAG-------------------CAGCAACTAA-------------------------------------CC---CA---GCA----------GCAGC--TGCA------------------GCAGCAGCAACAACAGCAGCAGCAACAACATCTC---------------------------------------------------------------CAACAGCAGCA------------------------------------AC---ACCAACAG
droYak3 2L:4902963-4903198 + ACAGC--AGCGG---CAGCAGC------T----------------------------------------------------------------GC---------------------------GACAGCAGTAAAAG-------AG------------------GCAACAACAAGCAG----------CGCACAGCGGCAA------------------------------------------------TAA-------------------CAGAGCCAGCAGCAATATCACG-------------------AAAGCAATAA---------------T-AA-------CATCACTTAT---------A----------------------GT-------AG---------------------------------------------------------------CCATAAGAATAGC---AGC------AG------------------C------------------AGCA------------A------CAACAGCAGCTTA----------------------------------------------AACAGCAG---------------CAGCAGCAAC-------------------------------------------------AACAGCAGCT------------TAAACAGCAGCAGCAACAACAACAGCAGCTTAAA---------------------------------------------------------------CAGCAGCAGCC------------------------------------AC---AACAACAG
droEre2 scaffold_4820:7990641-7990895 - GCGGA--T--GTGG-CCG------CTGTGA----------------------------------------------------------------------------------ATGCAGCCGCGG------CAGCAGGA-GCAGCA---------------------G---CCACT---------------------ACCAATGTGAAACCCATT-------------------------------------------------------------------------GCTCCCATTGCACCGCCCAGTAAG----------CGAGTTGGATCT---CCCACCCAAG--------------CC---CA----------------------G-CAA------------------------------------------------------------------------------CAGC---ATC------AAC------------------CGC------------------A------------A------CAGCAGCATCAGC---------------------A------ACAA-------------------CAGCAACTACCC---------------CAGCCAGCACCAGT----TCCT---GG---CCA----------ACAGC--CACA------------------ACAACAGTCGCAGCAGCAGCAGCAACAACAAGCG---------------------------------------------------------------CCTCAGCAGCA------------------------------------AC---AGCCACAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droGri2
GCAGA--C--ATCGTCGG--GCGTTGGC---------CTCA---TC-------------------------------------------------------AGCAG------------------------------AA-GTCGCA---------------------G---CAATTTG----C-----------GTGAAATTTGTAAAACGCATGCAATTTGCTAACAA-----------------CAATTGATTGCCCCGACCGAAGG----------------------------------------------------------------------------------------------------------------------------------AG---------------------------------------------------------------CTACAGCAACAGC---AGC------AGC------------------------------------AGCA------------A------CAACAGCACTAAC---------------------A------ACAACAGCCACAA-------------------------------------CAACATTAAGTAGTAGTGTTCC---GG---TTA----------ACAGCT---TA------------------AAAGCAACAGCACCAACAACAACAACAACATCAA---------------------------------------------------------------CTACAGCAGCA------------------------------------AC---AACAACAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads
droVir3
GCAGC--C--ATCGTCAG--GCCTTGGCCT---------CG---TC------AGCTCGTC-----------------------------------------------------------GGCGA------------CTTCTCGCA---------------------G---CAATTTG----C-----------GCGAAATTTGTAAAACGCATGCAATTTGATAACAG-----------------CAATTGATTGCCTCTACCGAAG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C------AGCAGCAACAACAGTGGCAACAACAGCAGCAA------------------------------------------------------------------------------ACACCA-------------------------------------CAACAATAAGTAGTAATGTGCC---GG---TTA----------ACAGCT------------------------------CAGCAGCAACAACATCAACTACTGCAA---------------------------------------------------------------CAACAACATCA------------------------------------AC---AAGAACAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAA---------------------------------------------------------------CAACAACATCA------------------------------------AC---A.......1950.201000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAACATCAAC...................................................................................................................................18200.051000000000000000000000000000000000000000000000000000000000010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAA---------------------------------------------------------------CAACAACATCA------------------------------------AC---AA......19200.051000000000000000001000000000000000000000000000000000000000000000
droMoj3
GCAGT--T--ATCGTCAG--GCCTTGGCCT---------CA---TC------AGCGCTTC-----------------------------------------------------------GGCGA------------CTTCTCGCA---------------------G---CAATTTG----C-----------GCGAAATTTGTAAAACGCATGCAATTTGCTAACAG-----------------CAATTGATTGCCTCGACCGAAGC----------------------------------------------------------------------------------------------------------------------------------AG---------------------------------------------------------------CAA------CAAC---AGA------------------------AACAGCAGCAGC---------AA---------------------------CACCAAC---------------------------------------AA-------------------------------------CAACAATAAATAGTAATGTGCC---GG---TTA----------ACAGTTCAGCA------------------GCAACAACATCAACAACAACAATAACAACATCAA---------------------------------------------------------------CGACAGCAACA------------------------------------AC---ATCAACAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................AG---------------------------------------------------------------CAA------CAAC---AGA------------------------AACAGCA.....................................................................................................................................................................................................................................................................................................................................................................1950.201100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAATAACAACAT..............................................................................................................................20190.051100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---AGA------------------------AACAGCAGCAGC---------AA---------------------------CAT.......................................................................................................................................................................................................................................................................................................................21200.051100000
droWil2
GCAAC--TGCAA---CTGCAAC--TGGT---------CTCA---TC-------------------------------------------------------GTTCA------------------------------GA-GTCGCA---------------------G---CAATTTG----C-----------GAGAAATTTGTAAAACGCAGGCAATTTGCTAACAA-----------------CAATTGCCTGCCTCAACCTCAAC----------------------------------------------------------------------------------------------------------------------------------CT---------------------------------------------------------------CA---------AC---ATC------------------------AACAACAGCAGC---------AACA------------A---------------------------------------------------------CAA-------------------------------------CAACAATAAGTAGTAATGTGCC---CG---TTA----------ACAGTT---CA------------------------GCAGCAACAACAACAACATCAACAACAA---------------------------------------------------------------CATCAGCAACT------------------------------------AC---GTCAACAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT---CA------------------------GCAGCAACAACAACAA.......................................................................................................................................2060.17100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAACAACATCAACAAC.............................................................................................................................23130.08101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACATCAACAACAA---------------------------------------------------------------C...........................................................25200.05100010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAGC---------AACA------------A---------------------------------------------------------CAA-------------------------------------CAAC.................................................................................................................................................................................................................................24200.05100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAACAACAACATC...................................................................................................................................20200.05100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACATCAACAACAA---------------------------------------------------------------CA..........................................................20200.05101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA---------AC---ATC------------------------AACAACAGCAGC---------A......................................................................................................................................................................................................................................................................................................................................................20200.05100010
dp5
GG------------CCAG--ACCTCGTTCT---------CA---GC---------CC--------------------------------ACATGTT-TGGCAACA------------------------------------------------------------------------------------------TGAATCAGTCCAGCTCATCCTAGCTGCCAACTAAACGCAATTCCAATTCATAATTCGCCGCCGCCGCCGCAGCAG---------CCACAGTC----------------------------------------------------------G--------------CA---CA----------------------A-CAA------------------------------------------------------------------------------CAAC---AAC------AAC---------------AACAACAGCAGCAA------CAGCA------------------------------------------------------------GCAACAGTTGCAA-------------------------CAGCTGCAA---C-------------------------------------------------TGCA------------------ACAGCAACAGCAGCAGAATCAACAACAACAACAA---------------------------------------------------------------CAACAGCAACA------------------------------------GC---AGCAGCAASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................................................................................................................................................................................................................................TAAACGCAATTCCAATTCATAATT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
...............................................................................................................................................................................................................GCTCATCCTAGCTGCCAACT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
........................................................................................................A------------------------------------------------------------------------------------------TGAATCAGTCCAGCTCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA------------------ACAGCAACAGCAGCAGAATCAA.......................................................................................................................................2511.0010100000000
.G------------CCAG--ACCTCGTTCT---------CA---GC---------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
....................................................................................................................................................................................................GAATCAGTCCAGCTCATCCTAGCTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010000000
...............................................................................................................................................................................................................................................................CCGCCGCCGCAGCAG---------CCACAGTC----------------------------------------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
........................................................................................................................................................................................................CAGTCCAGCTCATCCTAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
......................................................................................................................................................................................................................................CGCAATTCCAATTCATAATTCGCCGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAGAATCAACAACAACA...............................................................................................................................2411.0010000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGAATCAACAACAACAACAA---------------------------------------------------------------CAAC........................................................2811.0010010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---AAC------AAC---------------AACAACAGCAGCAA------CAG.....................................................................................................................................................................................................................................................................................................................................................2520.5010100000000
............................................................................................................................................................................................................................................................CCGCCGCCGCCGCAGCAG---------CC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC------AAC---------------AACAACAGCAGCAA------CAGC....................................................................................................................................................................................................................................................................................................................................................2480.1310000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAA---------------------------------------------------------------CAACAGCAACA------------------------------------GC---AGCAGCA.26110.0910000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAA---------------------------------------------------------------CAACAGCAACA------------------------------------GC---AGC.....24110.0910100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAACAACAACAACAA---------------------------------------------------------------CA..........................................................20120.0810100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---AAC------AAC---------------AACAACAGCAGCAA------CA......................................................................................................................................................................................................................................................................................................................................................24140.0710000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAA---------------------------------------------------------------CAACAGCAACA------------------------------------GC---AGC.....23140.0710001000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAA---------------------------------------------------------------CAACAGCAACA------------------------------------GC---AGCAG...24150.0710100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAACAACAACAACAA---------------------------------------------------------------CAAC........................................................21200.0510010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAA---------------------------------------------------------------CAACAGCAACA------------------------------------GC---........24200.0510010000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---------------------------------------------------------------CAACAGCAACA------------------------------------GC---AGCAGC..21200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---------------AACAACAGCAGCAA------CAGCA------------------------------------------------------------.......................................................................................................................................................................................................................................................................................21200.0510000100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAACAA---------------------------------------------------------------CAACA.......................................................18200.0510100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAA------CAGCA------------------------------------------------------------GCA....................................................................................................................................................................................................................................................................................18200.0510100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC---AAC------AAC---------------AACAACAGCAGCAA------........................................................................................................................................................................................................................................................................................................................................................24200.0510100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAGCAA------CAGCA------------------------------------------------------------GCA....................................................................................................................................................................................................................................................................................22200.0510100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------AACAACAGCAGCAA------CAGCA------------------------------------------------------------G......................................................................................................................................................................................................................................................................................21200.0510100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACA------------------------------------GC---AGCAGCA.19200.0510000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---------------AACAACAGCAGCAA------CAGCA------------------------------------------------------------.......................................................................................................................................................................................................................................................................................22200.0510001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---------------AACAACAGCAGCAA------CAGC....................................................................................................................................................................................................................................................................................................................................................21200.0510010000000
droPer2
GCAAA--T--GATGTCC------AAGATGA---------CG---GC------AGCACATC-----------------------------------------------------------AGCAG------------CA-TCAACA---------------------T---CAG----------------------------------------------------------------------------------------------------------CAACAAGTGCACC-------------------AGTTTATGCA---------------CCAG-------CAAAT---------GTTGCA----------------------A-CGACAGCAG---------------------------------------------------------------C------------------------ATC---------------AGCAACAGCAGC------AGCAACA------------ACAA------CAG---------------CAGCAGCATTTGCAACAGCAGCAGC------AAC-ATGGACATCC------------------------GCA----------------------TGG---ACA----------AC-----AGCA------------------GTCGCAACAGCATCAGCAGCAGTCGCAGCTCCAT---------------------------------------------------------------GGACAGCAGCA------------------------------------AC---ACCAACTGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGCAGC------AAC-ATGGAC..................................................................................................................................................................................................................................................................2314.004400000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCC------------------------GCA----------------------TGG---ACA----------AC-----AGCA------------------GTC..........................................................................................................................................................2213.003300000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCAGCTCCAT---------------------------------------------------------------GGACA.......................................................1813.003300000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAT---------------------------------------------------------------GGACAGCAGCA------------------------------------AC---ACCAACT.2312.002200000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAGC------AAC-ATGGAC..................................................................................................................................................................................................................................................................2211.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGTCGCAGCTCCAT---------------------------------------------------------------GGACAG......................................................2511.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAGC------AAC-ATGGACATC...............................................................................................................................................................................................................................................................2311.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCATTTGCAACAGCAGCAG...................................................................................................................................................................................................................................................................................2111.001001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGTCGCAGCTCCAT---------------------------------------------------------------GGA.........................................................2411.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C-ATGGACATCC------------------------GCA----------------------TGG---ACA----------..........................................................................................................................................................................................2011.001010000
....A--T--GATGTCC------AAGATGA---------CG---GC------AGCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA----------AC-----AGCA------------------GTCGCAACAGC..................................................................................................................................................1911.001001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGCAGC------AAC-ATGGA...................................................................................................................................................................................................................................................................2211.001001000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCC------------------------GCA----------------------TGG---ACA----------AC-----AGCA------------------GT...........................................................................................................................................................2111.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................A-CGACAGCAG---------------------------------------------------------------C------------------------ATC---------------AGCAACAGCC..................................................................................................................................................................................................................................................................................................................................................................2411.001001000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGC------AGCAACA------------ACAA------CAG---------------C..........................................................................................................................................................................................................................................................................................................26110.091010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACA------------ACAA------CAG---------------CAGCAGC....................................................................................................................................................................................................................................................................................................21200.051001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGC------AGCAACA------------ACA....................................................................................................................................................................................................................................................................................................................................18200.051010000
droAna3
ACAAC--ATTGT---CGCCGGC--A-GTC-----------ATGACC------AGCTCGCC-----------------------------------------------------------AA----------------------------------------------------------------------------TGT-------------------------------------------------------------------------------------------------------------------------CGCTGTCATGCATCC--AACATACGGCAGT---------------TG-C---------------CACAA-CAACAATAG---------------------------------------------------------------CA---------AC---AGC------------------------AACAGC---AAC------AGCAATAACAACAACAACAGCAG------TAGC---------------------------A------GCAGCAGCCACAA----------CAGCAATT------------------GCAA---------------------------TCA----------GCAA---ATCA------------------GCAACTACAGCAATAACAATAACAGCAACAGCAA---------------------------------------------------------------CAACATCAGCA------------------------------------AT---AGCAGCAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.CAAC--ATTGT---CGCCGGC--A-GTC-----------A.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.....................................................GCTCGCC-----------------------------------------------------------AA----------------------------------------------------------------------------TGT-------------------------------------------------------------------------------------------------------------------------CGCTGTCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.........TGT---CGCCGGC--A-GTC-----------ATGACC------AGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..........GT---CGCCGGC--A-GTC-----------ATGACC------AGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA----------CAGCAATT------------------GCAA---------------------------TCA----------GCAA---AC.................................................................................................................................................................................2411.001010000
..........GT---CGCCGGC--A-GTC-----------ATGACC------AG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAG------TAGC---------------------------A------GCAGCAG................................................................................................................................................................................................................................................................................2160.171100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAA---------------------------------------------------------------CAACATCAGC..................................................1970.141001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAG------TAGC---------------------------A------GCAGCAGCC..............................................................................................................................................................................................................................................................................1980.131100000
...........................................................................................................................................................................................................................................................................................................................................................................................................AATAG---------------------------------------------------------------CA---------AC---AGC------------------------AACAGC---AAC------..........................................................................................................................................................................................................................................................................................................................................................21110.091010000
droBip1
CCAGAGCA--AT---CAG---------A--------TGGCG---GC-C-----GC-------------------------------------------------------------------CG-----------------------------------------------------------------------------------------------------------------------------------------CTG--------------------------------------------------------------------------------CTCGCGA------------ATCG-C-TGCTTAATTCGTATCT-------------GTATCAGAAGGATGGCGATTATATGTCGGAGCAGGGCTACTGGCAG---------------------------CAGC---ATC------------------------AGCATCACCAGCAGCAACAGCAACA------------------------------------GC---------------A------GCAA-------------------CAGCAACAGAATCAGCAGCAGCAG---C-------------------------------------------------AACA------------------CCAACAACAGCAGCACCAACAACAGAAACATCTA---------------------------------------------------------------CAACAGCAGCA------------------------------------AC---AGCAACAASizeHit CountTotal NormTotal
No Reads
droKik1
GCTGG--TACAG---CAACAACCTCAGCCTGGACAGGCTCA---GC-------------------------------------------------------------------------------------AGCAGCA-GCAGCA---------------------A---CAAGTTA----T-----CACCCAGCGACATGTAATAAACACAT-CAACGGCCCAAGGA-----------------CAACAGATAA---------------------------------------------------------------------------------------------------TCCAAAGTCTTCAA--------------------------------------------------------------------------------------------------------CAGA---AGC------AGC------------------------------------AGCA------------A------ATGTTGCATGTTC---------------------AACAACAGCAACAGCCACAA-------------------------------------CAACAGCAACTTC-------CTCAGGG----------------GC-----AGCA------------------ACATCCCCAACAACAACAACAACAACAGCAACAA---------------------------------------------------------------CAACAGCAGCA------------------------------------AC---AACCGCAGSizeHit CountTotal NormTotal
No Reads
droFic1
GCAAC--ACCTG---CGGCAGCG---GG----------------------------------------------------------------------------------AGCTGCAGCTGCAG------CAGCAGCA-GCATCA---------------------G---CTAGGAA----------TGGCCAGCGACGT-------------------------------------------------------------------------------------------------------------------------CGCGTGGAAGCA---GCAACAGAAG---------------GCTGCAA-C---------------GGCAA-C------AT---------------------------------------------------------------C---AACAGTAAT---AGC------------------------AACATC---AAC------------A------------GCAA---------CAGCAACGGCAACAGCAA------------CAGCAACAGCA---ACAT----------CGGCAACT------------------GCAACACCAA----------------------------------GCTT---------------------------GGCAGCAGCAACAGCAACAGCAACAACAACAA---------------------------------------------------------------CAACAACAACA------------------------------------AC---AACAACA-SizeHit CountTotal NormTotal
No Reads
droEle1
GCAGA--AT---TTTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAGTCAACAACA-------------GCAACAGGAGTACAACAATTGCTTGCCTATTAATTATTATCAACAACAGCAGCAGCAACAGCAAC---------AAC---AAC------------------------TACAGC---AGC------AGCAGCA------------GCAGCAACAACAGCAACCGC---------------------AACAACAGCAAC------AGCCAATGACAGCT------------------------A----------CAA------------CGACAGCAGCCTCATGCAATGCCACAACA------------------GCAGCAACAACAACAGCAACAACAGCAACAACAG---------------------------------------------------------------CAACAGCAGCA------------------------------------GC---AACAACAASizeHit CountTotal NormTotal
No Reads
droRho1
GCAGC--CGCAAGGTCAG---------G--------GACCG---TC-G-----TC-----------------------------------CCAGC------------------------AGCAG---CAGCAGAAT-------TTGCATCACCATCAACAGCAG-------------------------------------------------------------C-----------------------------------------------------------------------------------------------------------------------------------------AGCA-AC---------------ACCAA----------------------------------------------------------CAGCAGCAG---------------CAGC---AGC------------------------AACACC---AAC------------AGCAGCAGCATATGCAGCAGCAACAGCAGCAGC---------------------AACATCAGCAG-------------------CAG------------------------CAACATCAA-CAG------------CAGCAGCA----------GC-----ATCA------------------ACAGCAGCAGCAGCAGCAGCATCAGCAGCAGCAA---------------------------------------------------------------CAACATCAGCA------------------------------------GC---AGCAACAASizeHit CountTotal NormTotal
No Reads
droBia1
GCAAC--A--AG---TGG---------G--------GGACA---GC-T-----GC-----------------------------------CAGGT------------------------GACA-------------------GCA---------------------A---CAAT----------------------------------------------------------------------------------------------------------------------------------------------------ATTGTGAAGTATCC--CTAAAGCGCTCAA------------AGCA-AC---------------AGT-------------------GA---------CAGCAGCAACAA---------------------------CAGCAGCAACAGCAATAGC---AGC------AG------------------C------------------ATCA------------G------CAGCAGCAGCAACAACAACAGCAA----------------------------------------CAG------------------------CAA-------TAGTAA---------T------A----------GC-----AGCA------------------GCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAG---------------------------------------------------------------CAACAGCAGCA------------------------------------AC---AACAGCAASizeHit CountTotal NormTotal
No Reads
droTak1
GAAGA--ACCAG---CGGGAGC-----------------CA---GC-A-----G-------------------------------------------------------------------------CAGTGAGTA-------TG------------------AATCCAACG--CAGTTCACCATTCCGCGGAACGGCGT------------------------------------------------CTT-------------------CATAGCCGTCAACGAGTGGTCG-------------------GAGCCGATGG---------------CCAA-------CAGCTCCTCC---------A----------------------ATAGTCACCAGCATCATAGT------------------------CATCATCATCATCACCACCAC----AATCACC---------AT---CATCACAGCAGC------------------------AGC---------AACAATAGC------------------------------------------------------------------AA-------------------------------------C-------------------------------A----------AC-----AGCA------------------GTAGCAACAGCAACAGCAACAGCAACAGCATCAA---------------------------------------------------------------CAACAACAGCA------------------------------------GC---AGCAACAGSizeHit CountTotal NormTotal
No Reads
droEug1
TCGGC--AT---GACCGG---------A--------TT-CG---ATGGTCTGAATATGACAGCGGCCTCAGCATTCCTCGATCTAGAGCACACGCTCCAGCAGCAACAAATG-----------------------------------------------------------------------------------------------------------------------------------------------CCGCAAAT----------------------------------------------------------------------------------------------------------------------------------GCAGTTG---------------------------------------------------------------CA---------GC---AGC------------------------AACACC---AGC------AGCAGCA------------ACAA------CAA---------------CAGACGCACCAGCAACAACATCACC------AGC-AAACACAGCAGCAACTAACT------------------------------------C---AA---CTA----------ACGCAACAACTGCA---------------ACATCTC---CATCAGCAGCAACATCAACAGCAA---------------------------------------------------------------CTACATCAGCA------------------------------------GC---AACAACAGSizeHit CountTotal NormTotal
No Reads
dm3
GCAAT--ACCGT---T------------------------------------------------------------------GTAGTTGCCGTGCGTCATCAGCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGTTG------------------------CAA------CAGCAGCAGCAGCAACAGCAGC---------AACTGGCTTTAC---------------------ATCATC---AGC---------ATCA------------G------CAGCAG-------------------------------------------------------------------------------------CAGCATCAG---C-------AACAGCAGCAGCA----------GC-----ATCA------------------GCAGCAGCAGCATCAGCAACAGCAGCGT---GCCACTCTCGTGCAGCCAGGATTCTTGTTCAGCTATCGCAGCAATCAACCCCAGCAGCAACAGCAACCAGCGCAGCA------------------------------------AA---TACATCA-SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCGT---GCCACTCTCGTGCAGCCA............................................................................................................2516.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG---C-------AACAGCAGCAGCA----------GC-----ATC................................................................................................................................................................................22133.084000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100010000000000000000000100000000000000006170160000000000000000100000000000100010010000000100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATC---AGC---------ATCA------------G------CAGCAG-------------------------------------------------------------------------------------CAGCATC..............................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................CAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGTTG------------------------CAA------CAGCAGCAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................2222.5050000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000001000000000000000000000
..........GT---T------------------------------------------------------------------GTAGTTGCCGTGCGTCATCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..................................................................................GTAGTTGCCGTGCGTCATCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCCAGGATTCTTGTTCAGC.............................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCGT---GCCACTCTCGTGC.................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGCAATCAACCCCAGC.......................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCAGCAACAGCAGCGT---GCC...........................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAATCAACCCCAGCAGCAACAGC..............................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG---C-------AACAGCAGCAGCA----------GC-----AT.................................................................................................................................................................................21151.40210000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000001000001100002513021000001000000000000000000000101000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A----------GC-----ATCA------------------GCAGCAGCAGCATCAGC............................................................................................................................................2421.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................TGCCGTGCGTCATCAGCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGTTG------------------------C....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCAACCCCAGCAGCAACAGCAAC...........................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................AGTTGCCGTGCGTCATCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......ACCGT---T------------------------------------------------------------------GTAGTTGCCGTGCGTCATCAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATTCTTGTTCAGCTATCGC.......................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAACAGCAGCGT---GC............................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................TTGCCGTGCGTCATCAGCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCATCAGCAACAGCAGCGT---GC............................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCGT---GCCACTCTCGTGCAGCCA............................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...AT--ACCGT---T------------------------------------------------------------------GTAGTTGCCGTGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................TGCGTCATCAGCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGTTG------------------------CAA------CAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATTCTTGTTCAGCTAT..........................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................TGCCGTGCGTCATCAGCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGTTG------------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
....T--ACCGT---T------------------------------------------------------------------GTAGTTGCCGTGCGTCATCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTCGTGCAGCCAGGA.........................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAACAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---AGC---------ATCA------------G------CAGCAG-------------------------------------------------------------------------------------CAGCA................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCA----------GC-----ATCA------------------GCAGCA.......................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCA----------GC-----ATCA------------------GCAGC........................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
ACAAC--C--ATCGCCC------ATGTTG------GGCAGA---CC-------------------------------------------------------AGCAG------------------------------CA-GCCACA---------------------G---CAGATA---------------------------T----------------------------------------------------------------------------------------------------------------------GCAGAGATACG---TCCAGAGGAT---------------GCAGCAA-C---------------AGC----------------------------------------------------------------------------------AACAGC---AGC------------------------AGCAACAGCAGCAG------CAGCA------------GCAA------CAG------------C---------------A------GCAGC-------------------AGCAA---------------------C-------------------------------------------------TACAGCAGCAGCAACAGCAGCATCAACAC---CAGGAGTTGT---------ACCGC---------------------------------------------------------------CAGCAGCAGCTACATCGCACTAGTATGAGCGGCATAGCCAGCCAGCAACACTTGCAGCAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGT---------ACCGC---------------------------------------------------------------CAGG........................................................1521.50300000001200000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAG------CAGCA------------GCAA------CAG------------C---------------A------G......................................................................................................................................................................................................................................................................................25201.3026000002600000000000
...........................................................................................................................................................................................................................................................................................................................................................................AGCAA-C---------------AGC----------------------------------------------------------------------------------AACAGC---AGC------------------------AGCAA.......................................................................................................................................................................................................................................................................................................................................................................23201.1523000023000000000000
.........................................................................................................................................................................................................................................................................................................................................................T---------------GCAGCAA-C---------------AGC----------------------------------------------------------------------------------AACAGC---A......................................................................................................................................................................................................................................................................................................................................................................................................19111.0011000001100000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC------------------------AGCAACAGCAGCAG------CAGCA------------GCA....................................................................................................................................................................................................................................................................................................................................25200.10200000000000200000
..............................................................................................................................................................................................................................................................................................................................................................................AA-C---------------AGC----------------------------------------------------------------------------------AACAGC---AGC------------------------AGCA........................................................................................................................................................................................................................................................................................................................................................................19200.05100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------CAGCA------------GCAA------CAG------------C---------------A------GCAGC-------------------AGC............................................................................................................................................................................................................................................................24200.05110000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAG------CAGCA------------.......................................................................................................................................................................................................................................................................................................................................19200.05100000000000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGT---------ACCGC---------------------------------------------------------------CAGGT.......................................................16200.05100000001000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAG------CAGCA------------GCAA------CAG------------C---------------..............................................................................................................................................................................................................................................................................................22200.05100100000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................AGC----------------------------------------------------------------------------------AACAGC---AGC------------------------AGCAACA.....................................................................................................................................................................................................................................................................................................................................................................19200.05100000000000100000
droSec2
TCATT--C--CTCGAT------------------------------------------------------------------CTGGAGCACTCGCTTCAGCAGCAGCAGATGC---------AGCAGATG-------------------------CAATTGCAG-------------------------------------------------------------C-----------------------------------------------------------------------------------------------------------------------------------------AGCA-AC---------------ACCAT----------------------------CAGCAGCAGCAG---------------------------CAGACGCACCAGCAACAGC---AGC------------------------AACACCAGCAGCAA------------------------------------CACCACCAACAGC---------------A------GCAG-------------------CAGCAACTAA-------------------------------------CC---CA---GCA----------GCAGC--TGCA------------------GCAGCAGCAACAACAGCAGCAGCAACAACATCTC---------------------------------------------------------------CAACAGCAGCA------------------------------------AC---ACCAACAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------CACCACCAACAGC---------------A------GCAG-------------------CA..............................................................................................................................................................................................................................................................2120.5010010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCACCAACAGC---------------A------GCAG-------------------C...............................................................................................................................................................................................................................................................19200.0510010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------GCAGCAGCAACAACAGCAGCA........................................................................................................................................22200.0510010
droYak3
ACAGC--AGCGG---CAGCAGC------T----------------------------------------------------------------GC---------------------------GACAGCAGTAAAAG-------AG------------------GCAACAACAAGCAG----------CGCACAGCGGCAA------------------------------------------------TAA-------------------CAGAGCCAGCAGCAATATCACG-------------------AAAGCAATAA---------------T-AA-------CATCACTTAT---------A----------------------GT-------AG---------------------------------------------------------------CCATAAGAATAGC---AGC------AG------------------C------------------AGCA------------A------CAACAGCAGCTTA----------------------------------------------AACAGCAG---------------CAGCAGCAAC-------------------------------------------------AACAGCAGCT------------TAAACAGCAGCAGCAACAACAACAGCAGCTTAAA---------------------------------------------------------------CAGCAGCAGCC------------------------------------AC---AACAACAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAACAACAACAGCA..................................................................................................................................25200.05101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---------------CAGCAGCAAC-------------------------------------------------AACAGCAG...........................................................................................................................................................................20200.05101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAACAACAGCAGC................................................................................................................................21200.05100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG---------------CAGCAGCAAC-------------------------------------------------AACAGCAGC..........................................................................................................................................................................23200.05100100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---AGC------AG------------------C------------------AGCA------------A------CAACAGCAGC......................................................................................................................................................................................................................................................................................................................23200.05100100000000
droEre2
GCGGA--T--GTGG-CCG------CTGTGA----------------------------------------------------------------------------------ATGCAGCCGCGG------CAGCAGGA-GCAGCA---------------------G---CCACT---------------------ACCAATGTGAAACCCATT-------------------------------------------------------------------------GCTCCCATTGCACCGCCCAGTAAG----------CGAGTTGGATCT---CCCACCCAAG--------------CC---CA----------------------G-CAA------------------------------------------------------------------------------CAGC---ATC------AAC------------------CGC------------------A------------A------CAGCAGCATCAGC---------------------A------ACAA-------------------CAGCAACTACCC---------------CAGCCAGCACCAGT----TCCT---GG---CCA----------ACAGC--CACA------------------ACAACAGTCGCAGCAGCAGCAGCAACAACAAGCG---------------------------------------------------------------CCTCAGCAGCA------------------------------------AC---AGCCACAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA------------------ACAACAGTCGCAGCAGCAGC.........................................................................................................................................2312.0020000110
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACA------------------ACAACAGTCGCAGCAGCAGC.........................................................................................................................................2412.0021000100
..................................................................................................................GCAGCCGCGG------CAGCAGGA-GCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAAGCG---------------------------------------------------------------CCTCAGC.....................................................2111.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................A----------------------G-CAA------------------------------------------------------------------------------CAGC---ATC------AAC------------------CGC------------------A------------A------C...............................................................................................................................................................................................................................................................................................................................2111.0010000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAAGCG---------------------------------------------------------------CCTCAGCAGCA------------------------------------AC---........2511.0010100000
....................................................................................................................AGCCGCGG------CAGCAGGA-GCAGCA---------------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAGCG---------------------------------------------------------------CCTCAGCAGCA------------------------------------AC---AGCCAC..2511.0010100000
............................................................................................................................................CAGCA---------------------G---CCACT---------------------ACCAATGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
..................................................................................................................................................................................................................................................................................................................GTAAG----------CGAGTTGGATCT---CCCACCCA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
.......................................................................................................................................................................................................................................................................................................................................GGATCT---CCCACCCAAG--------------CC---CA----------------------G-CA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000000
..............................................................................................................................................................................................................AACCCATT-------------------------------------------------------------------------GCTCCCATTGCACCGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
..................................................................................................................................................................................................................................................................................................................................................CACCCAAG--------------CC---CA----------------------G-CAA------------------------------------------------------------------------------CAGC---AT.....................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCAGCAGCAGCAGCAACAACAAGC............................................................................................................................2711.0010100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAAGCG---------------------------------------------------------------CCTCAGCA....................................................1911.0010001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAAGCG---------------------------------------------------------------CCTCAGCAGCA------------------------------------AC---AGC.....2711.0010100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------A------CAGCAGCATCAGC---------------------A------ACAA-------------------CAGCAAC.........................................................................................................................................................................................................................................................2720.5011000000
...................................................................................................................................AGCAGGA-GCAGCA---------------------G---CCACT---------------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.3310000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------ACAACAGTCGCAGCAGCA...........................................................................................................................................1930.3310001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAACAAGCG---------------------------------------------------------------C...........................................................2040.2510000010
........................................................................................................................GCGG------CAGCAGGA-GCAGCA---------------------................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1860.1711000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGTCGCAGCAGCAGCA........................................................................................................................................2080.1310000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAGCAGCAGCAGCAACAAC................................................................................................................................21160.0610000010

Generated: 05/17/2015 at 10:18 PM