ID:

dgr_331

 Coordinate:

scaffold_15110:16267344-16267494 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.4 -12.17 -12.17

Flybase annnotation

CDS [Dgri\GH16793-cds]; exon [dgri_GLEANR_16458:2]; intron [Dgri\GH16793-in]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey+
mature
  1. scaffold_9455:1225-1245 +
  2. scaffold_14906:4989379-4989399 -
  3. scaffold_15081:2812031-2812051 +
  4. dgr_331  scaffold_15110:16267373-16267393 +
  5. scaffold_15110:21510453-21510473 -
  6. scaffold_15245:4588714-4588734 +
star

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CTCAGGTGCAAACGTTGCAGGGTCATCAGATCATTGGCAATATAAATCAGGTGAATATGACTGATTTTCAACAACAACAGCAACAGCCGCAGCAGCAACAACAGCAGCAGCAGCAGCAGCAACAACAACAACAACCACAGCAACAACAACAACAAACACAACCACAACAGACGCTTTGAGTAGCAACAAGCAACATTTTGACGAATCGGACGGAATCGTAGAAAACATAAATTTTTGATACCCAATCCCTT
**************************************************.((((.((.....)).)))).........((....((.((.((.((.......)).)).)).))....))....................................................(((......))).................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M041
female body
........................................................................................................................................................................................................ACGAATCGGACGGAATCGTAGAA............................ 23 0 1 1.00 1 1
...............................................................................GCAACAGCCGCAGCAGCAACA....................................................................................................................................................... 21 0 7 0.14 1 1
.................................................................................................ACAACAGCAGCAGCAGCAGCAG.................................................................................................................................... 22 0 20 0.05 1 1
.................................................................................................ACAACAGCAGCAGCAGCAGCAGCA.................................................................................................................................. 24 0 20 0.05 1 1

Anti-sense strand reads

GAGTCCACGTTTGCAACGTCCCAGTAGTCTAGTAACCGTTATATTTAGTCCACTTATACTGACTAAAAGTTGTTGTTGTCGTTGTCGGCGTCGTCGTTGTTGTCGTCGTCGTCGTCGTCGTTGTTGTTGTTGTTGGTGTCGTTGTTGTTGTTGTTTGTGTTGGTGTTGTCTGCGAAACTCATCGTTGTTCGTTGTAAAACTGCTTAGCCTGCCTTAGCATCTTTTGTATTTAAAAACTATGGGTTAGGGAA
**************************************************.((((.((.....)).)))).........((....((.((.((.((.......)).)).)).))....))....................................................(((......))).................************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droGri2 scaffold_15110:16267294-16267544 + dgr_331 CT---------CAGGTG-----------------CA------------------------------------------------------------AACGTTGCAGGGTCATCAGATCATTGGCAATATAAATCAGGTGAA--TATGACTGATTTTCAACAACAACA---GCAA------CAGCCGCAGCAGCAA---CAA---CAGCAGCAGCAGCAGCAGCAACAAC------AAC---AACAACCACAGCA---ACAACAAC------AACAAAC------ACAACCACAACAGACGCTTTGAGTAGCA----------------------ACAAGCAACATTT------------------TGACGAATCGGACGGA-ATCGTAGAAAACATAAA------TTTTTGA---TACCC-------AATCCCT---T
droVir3 scaffold_13049:16840052-16840281 - dvi_20239 CC---------CAGGTG-----------------CA------------------------------------------------------------AACGTTGCAGGGTCATCAGATAATTGGCAATTTGAATCAGGTGAA--TATGACTGATTTTCAACAGCAACA---ACAA------TCACAACAACAACAG---CAG---CAGCAACAGC---------AGC---------AGCAGCA---AC------A---ACAACAACAAC---AAACAAC------ACAACCACCACAGACGCTTTGAGTAGCACGTACAGCT-------------------------C------------------TGACGAATCGAACCGAA-TCATAGACCCCC----TTT-----ATT--ATAAACCC-------AATCC-CT---
droMoj3 scaffold_6680:19851416-19851632 + dmo_2544 CT---------CAGGTG-----------------CA------------------------------------------------------------AACGTTGCAGGGTCATCAGATCATTGGCAACTTGAATCAGGTGAA--TATGACTGATTTTCAACAGCAACA---ACAA------CAGCAACAGCAGCAG---CAA------CAACAAC---------------------------A---GC------A---GCAGCAAC------AGCAACA------ACAACCACCACAGACGCTTTGAGTAGCA-----AGCTCTCACT---TATGACAA-------------------------------AAATCGAACCGAA-TCATACACCCAC-----------TATT--ATAGACCC-------AATC-CA---A
droWil2 scf2_1100000004511:733558-733759 + CA---------CCGG-------------------CA-AATCCTGCTCATGAGAATGTACGCAGTTGGCTA----AGG-------------------AAAATTGCAG-----------------------AAATCCAAC--G--TACAGCCGAACGTCAGCAACAGCA---ACAAAAAGAGCAGCAGCAGCAGCAG---CAG---CAGCAACAACAACAACAGC------------AGCAGCA---AC------A---ACAGCGAC------AACAACC------ACAACCACAACAA-CAC---------------------------------------AGCATTT------------------CAACC----AAGTTGGAGGT---------------------------------------A--------TC---
dp5 XL_group1a:2070328-2070575 - CC---------CAATCG-----------------ACGACGCTCGCTGACAAAGCCGGAAACTGTTAGCTATTTCAAGAAGATCCTGGGATAGAGCAGAG---GCAGAGA------------------CAGAGGCAGAGGCA--GAGTATGGGGCATCGGCAACGGCA---TCGG------CAGAAGCATCAGCCT---CAA---CAGCATCCATAGCAGCAGCAGCAGC------AGCAGCA---GC------A---GCAGCAGTAGCAGTAGCAC-----------------------TCCCCAGT--------------------------------------------------------------------AACCGTAATCGTAGCCTTAA----CAGTAACTGTTAACAC----CCATTT------CCG---C
droPer2 scaffold_2:5826696-5826896 - CTGATAAAATGCAAATGCAAATGAAGCAACGCCAGCAGA-----------------------------------------------------AGCAGCAGCAGCAACAGCAGCAGA---------------------AACAGCA--------GCAGCAGCAACAGCAGCAACAA------CAGCAACAGCAGCAA---CAG------CAGCAACAGCAACAGCAGCAAC------AGCAACA---GC------A---GCAGCAGCAACAACAGCAA-------------------------------CAGCA-------------AC------------------------------------------------AACAGCAACAGCAGCAGCAG----CA------GC-----------------AAGTTTTT---G
droAna3 scaffold_13337:4357795-4357977 + CC---------CAGGTT-----------------CA------------------------------------------------------------GACCCTGCAGGGCCATCAGATCATAAGCAATTTGAATCAGGTGAA--TATGACTGATTTCCAGCAACAACA---GCAA------CAGCAACAACAGCAG---CAA---CAGCAACAACAGCAACAACAACAGCAGC---AACAGCA---AC------A---ACAGCAAC------AGCAAAC---ACAACAACCACAACAGACGCTCTGATC------------------------------------------------------------------AG--------------------------------------------------------------
droBip1 scf7180000395450:486899-487084 + CC---------CAGGTT-----------------CA------------------------------------------------------------GACCCTGCAGGGCCATCAGATCATAGGCAATTTAAATCAGGTGAA--TATGACTGATTTCCAGCAACAACA---ACAA------CAGCAACAGCAGCAA---CAA---CAGCAGCAACAGCAACAACAGCAGC------AGCAACAACCACCACCACA---ACAACAAC------AGCAAAC------ACAACCACAACAGACGCTCTGATC------------------------------------------------------------------AG--------------------------------------------------------------
droKik1 scf7180000302136:9714-9940 - CT---------ACAACA----------------------------------------------------------------------------ACAACCGCTACAACAACAACGTG---------------------CACTACCACGACC--------GCCACAACAACAACTG------CTACAACAACAACCG---CTA------CAACA---------------------------------AC------A---ACCGCTACAACAACAACGTGC------ACTACCACAACCGCCACAACAA-CAACA-------------TGCACAACAACAACCTGCACTCCGATACAAGCTGAGACTACGACAACCTGCGCTCA-ATCTCCGGAGACTACAA------CAACCTG---TGCCC-------AATCTCC---A
droFic1 scf7180000453807:200061-200280 - CC---------CAGGTG-----------------CA------------------------------------------------------------GACGCTGCAGGGCCATCAGATCATAGGCAATCTAAATCAGGTGAA--TATGACTGACTTCCAGCAACAACA---ACAA------CAGCAGCAACAGCAACAGCAGCAGCAGCAACAACAGCAACAGCAGCAGC------AACAACA---AC------A---GCAGCAAC------AGCAAAC------ACAACCACAACAGACGCTCTGATC------------------------------------------------------------------GGACCGAAAACCTAGATCCA-----------CTATTCAATA----TAATTA---A----TT---
droEle1 scf7180000491199:1914669-1914891 - CC---------CAGGTG-----------------CA------------------------------------------------------------GACGCTGCAGGGTCATCAGATCATAGGCAATTTAAATCAGGTGAA--TATGACTGACTTCCAACAACAACA---ACAG------CAGCAGCAGCAGCAA---CAA---CAGCAGCAACAGCAACAACAACAAC------AACAACA---GC------A---GCAGCAAC------AGCAAAC------ACAACCACAACAGACGCTCTGATC------------------------------------------------------------------GGACCGCAATCGTAGATCCAC----CATGTACTATTCTATA----TAATTA--------TTGTT
droRho1 scf7180000777233:62545-62705 + CC---------CAAGTG-----------------CA------------------------------------------------------------GACGCTGCAGGGCCATCAGATCATAGGCAATTTAAATCAGGTGAA--TATGACTGACTTCCAACAACAGCA---GCAG------CAGCAACAACAACAG---CAA---CAACAACAACAAC------------------AACAACA---GC------A---GCAGCAAC------AGCAAAC------ACAATCACAACAGACGCTCTGA------------------------------------------------------------------------------------------------------------------------------------
droBia1 scf7180000302428:5139277-5139443 + CC---------CAGGTG-----------------CA------------------------------------------------------------GACGCTGCAGGGCCATCAGATCATAGGCAATTTAAATCAGGTGAA--TATGACTGACTTCCAGCAGCAACA---ACAG------CAGCAGCAGCAGCAG---CAG---CAACAGCAGCAGCAGCAAC------------AACAGCA---GC------A---GCAGCAAC------AGCAAAC------ACAACCACAACAGACGCTCTGA------------------------------------------------------------------------------------------------------------------------------------
droTak1 scf7180000415135:455359-455566 - CC---------CAGGTG-----------------CA------------------------------------------------------------GACGCTGCAGGGCCATCAGATCATAGGCAATTTAAATCAGGTGAA--TATGACTGACTTCCAGCAACAACA---GCAG------CAGCAGCAACAGCAA---CAA---CAGCAGCAGCAGC------------------AACAACA---AC------A---GCAGCAAC------AGCAAAC------ACAATCACAACAGACGCTCTGATC------------------------------------------------------------------GGACCGAAGACGTAGATCCAC----TATGTACTATTCTATA----TAATTA--------TT---
droEug1 scf7180000409456:993580-993800 - CC---------CAGGTT-----------------CA------------------------------------------------------------GACGCTGCAGGGTCATCAGATCATAGGCAATATAAATCAGGTGAA--TATGACTGACTTCCAGCAACAACA---ACAG------CAGCAGCAGCAACAA---CAA---CAACAGCAGCAGCAACAACAACAGCAGC---AGCAGCA---AC------A---ACAGCAAC------AGCAAA------------CACAACAGACGCTTTGAACG-----------------------------------------------------------------GGACCGAACACACAATTCTA---------TATAGTTCTATA----TAATAATTAATTTTT---G
dm3 chr3L:14744212-14744416 - CC---------CAGGTG-----------------CA------------------------------------------------------------GACGCTGCAGGGCCATCAGATCATAGGCAATTTAAATCAGGTGAA--TATAACTGACTTTCAACAACAACA---ACCG------CAGCAGCAACAACAG---CAG---CAGCAACAAC---------AGCAGC------AACAACA---AC------A---ACAGCAAC------AGCAAA------------CACAACAGACGCTCTGATC------------------------------------------------------------------GGACCGAAGTCTTAGATCCAT----CTTGTACTATTCTATA----CAATTA--------TT---
droSim2 3l:14393220-14393445 - dsi_13813 CC---------CAGGTG-----------------CA------------------------------------------------------------GACGCTGCAGGGCCATCAGATCATAGGCAATTTAAATCAGGTGAA--TATGACTGACTTTCAACAACAACA---ACAG------CAGCAACAGCAGCAG---CAG---CAGCAACAACAGCAGCAGCAGCAGCAACAACAAC---A---AC------AACAACAACAAC------------CGCAACAGCAAACACAACAGACGCTCTGATC------------------------------------------------------------------GGACCGAAGTCATAGATCCAC----CTTGTACTATTCTATA----CGATTA--------TT---
droSec2 scaffold_0:6865195-6865408 - dse_452 CC---------CAGGTG-----------------CA------------------------------------------------------------GACGCTGCAGGGCCATCAGATCATAGGCAATTTAAATCAGGTGAA--TATGACTGACTTTCAACAACAACA---ACAG------CAGCAACAGCAACAG---CAG---CAGCAGCAACAACAGCAGCAGCAGC------AGCAACA---AC------A---ACCGCAAC------AGCAAA------------CACAACAGACGCTCTGATC------------------------------------------------------------------GGACCGAAGTCATAGATCCAC----CTTGTACTATTCTATA----CGATTA--------TT---
droYak3 3L:14831350-14831563 - dya_798 CC---------CAGGTG-----------------CA------------------------------------------------------------GACGCTGCAGGGCCATCAGATCATTGGCAATTTGAATCAGGTGAA--TATGACTGACTTTCAACAACAACA---GCAA------CAGCAGCAGCAGCAG---CAA---CAACAGCAGCAGCAACAGCAGCAGC------AACAACA---AC------A---GCAGCAAC------AGCAAA------------CACAACAGACGCTCTGATC------------------------------------------------------------------GGACCGAAGTCTTAGATCCAC----CTTGTACTATTCTATA----CAAATA--------TT---
droEre2 scaffold_4784:14710669-14710876 - der_815 CT---------CAGGTG-----------------CA------------------------------------------------------------GACGCTGCAGGGCCATCAGATCATCGGCAATTTGAATCAGGTGAA--TATGACTGACTTTCAACAACAACA---GCAG------CAGCAACAGCAACAA---CAA---CAGCAGCAGCAACAGC---AGC---------AGCAACA---AC------A---GCAGCAAC------AGCAAA------------CACAACAGACGCTCTGATC------------------------------------------------------------------GGACCGAAGTCTTAGATCCAC----CTTGTACTATTCTATA----CAAATA--------TT---

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droGri2
CT---------CAGGTG-----------------CA------------------------------------------------------------AACGTTGCAGGGTCATCAGATCATTGGCAATATAAATCAGGTGAA--TATGACTGATTTTCAACAACAACA---GCAA------CAGCCGCAGCAGCAA---CAA---CAGCAGCAGCAGCAGCAGCAACAAC------AAC---AACAACCACAGCA---ACAACAAC------AACAAAC------ACAACCACAACAGACGCTTTGAGTAGCA----------------------ACAAGCAACATTT------------------TGACGAATCGGACGGA-ATCGTAGAAAACATAAA------TTTTTGA---TACCC-------AATCCCT---TSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...............................................................................................................................................................................................................................................................................................................................................................................ACGAATCGGACGGA-ATCGTAGAA...............................................2311.00110
..........................................................................................................................................................................GCAA------CAGCCGCAGCAGCAA---CA..............................................................................................................................................................................................................................................2170.14110
..................................................................................................................................................................................................A---CAA---CAGCAGCAGCAGCAGCAG........................................................................................................................................................................................................................22200.05110
..................................................................................................................................................................................................A---CAA---CAGCAGCAGCAGCAGCAGCA......................................................................................................................................................................................................................24200.05110
droVir3
CC---------CAGGTG-----------------CA------------------------------------------------------------AACGTTGCAGGGTCATCAGATAATTGGCAATTTGAATCAGGTGAA--TATGACTGATTTTCAACAGCAACA---ACAA------TCACAACAACAACAG---CAG---CAGCAACAGC---------AGC---------AGCAGCA---AC------A---ACAACAACAAC---AAACAAC------ACAACCACCACAGACGCTTTGAGTAGCACGTACAGCT-------------------------C------------------TGACGAATCGAACCGAA-TCATAGACCCCC----TTT-----ATT--ATAAACCC-------AATCC-CT---SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................................................................................................................................................................TACAGCT-------------------------C------------------TGACGAATCGAAC............................................................2113.003000000000000000000000001001000000000000000000000000000000000010
......................................................................................................................................................................................................................................................................................................CAGACGCTTTGAGTAGCACGT...........................................................................................................................2112.002000000000000000000000000000000000000000000000000000000000000110
.....................................................................................................................................................................................................................................................................................................ACAGACGCTTTGAGTAGCACG............................................................................................................................2112.002000000000000000001010000000000000000000000000000000000000000000
...................................A------------------------------------------------------------AACGTTGCAGGGTCATC.....................................................................................................................................................................................................................................................................................................................................1812.002000000002000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................C---AAACAAC------ACAACCACCACAG.............................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................GACGAATCGAACCGAA-TCA....................................................1911.001000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................TGAATCAGGTGAA--TATGACTGA..............................................................................................................................................................................................................................................................................................2211.001000000000000000000000000001000000000000000000000000000000000000
...........CAGGTG-----------------CA------------------------------------------------------------AACGTTGCAGGGTCA.......................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................ATTGGCAATTTGAATCAGGTGAA--TAT....................................................................................................................................................................................................................................................................................................2611.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................TTTCAACAGCAACA---ACAA------TCACAAC...........................................................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................AGCT-------------------------C------------------TGACGAATCGAACCGA.........................................................2111.001000000000100000000000000000000000000000000000000000000000000000
.............GGTG-----------------CA------------------------------------------------------------AACGTTGCAGGGTCC.......................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000100
.......................................................................................................................................GGTGAA--TATGACTGATTTTC.........................................................................................................................................................................................................................................................................................2011.001000000000000000100000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TAGCACGTACAGCT-------------------------C------------------TGACGA...................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................C------ACAACCACCACAGACGCTTTGA....................................................................................................................................2311.001000000000000000000000010000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................GTAGCACGTACAGCT-------------------------C------------------TGACG....................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
..............GTG-----------------CA------------------------------------------------------------AACGTTGCAGGGTCAT......................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000010000000000000000000000000000000
......................................................................................................GCAGGGTCATCAGATAATTGG...........................................................................................................................................................................................................................................................................................................................2111.001100000000000000000000000000000000000000000000000000000000000000
..............................................................................................................ATCAGATAATTGGCAATTTGAATC................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................A------TCACAACAACAACAG---CAG---CAGC......................................................................................................................................................................................................................................2311.001000000000000000100000000000000000000000000000000000000000000000
........................................................................................................AGGGTCATCAGATAATTGGCAAT.......................................................................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................AACAGCAACA---ACAA------TCACAACAACA.......................................................................................................................................................................................................................................................2520.501001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................CAA------TCACAACAACAACAG---CAG---..........................................................................................................................................................................................................................................2140.251001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................AA------TCACAACAACAACAG---CAG---C.........................................................................................................................................................................................................................................2140.251000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................................................................................................AC------A---ACAACAACAAC---AAACAAC------A.........................................................................................................................................................22200.102002000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................AGCAACAGC---------AGC---------AGCAGCA---AC------A---.....................................................................................................................................................................................22200.102000000000000000000000000002000000000000000000000000000000000000
...............................................................................................................................................................................................ACAG---CAG---CAGCAACAGC---------AGC---------A..........................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................CACAACAACAACAG---CAG---CAGC......................................................................................................................................................................................................................................21200.051000000000000000000000000001000000000000000000000000000000000000
.......................................................................................................................................................................................................AG---CAGCAACAGC---------AGC---------AGCAGCA---.................................................................................................................................................................................................22200.051000000000000100000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................GC---------AGC---------AGCAGCA---AC------A---ACAACAACAAC---.......................................................................................................................................................................26200.051000000000000000000000000000000000001000000000000000000000000000
.........................................................................................................................................................................................ACAACAACAG---CAG---CAGCA.....................................................................................................................................................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................CACAACAACAACAG---CAG---CAGCA.....................................................................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................AGC---------AGC---------AGCAGCA---AC------A---ACAACAAC.............................................................................................................................................................................24200.051000000000000000100000000000000000000000000000000000000000000000
.............................................................................................................................................................................................CAACAG---CAG---CAGCAACAGC---------AGC---------AG.........................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................AACAACAG---CAG---CAGCAACAGC---------A......................................................................................................................................................................................................................22200.051000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................AGC---------AGCAGCA---AC------A---ACAACAACAAC---.......................................................................................................................................................................24200.051000100000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................CAACAACAACAG---CAG---CAGCA.....................................................................................................................................................................................................................................20200.051000000000000010000000000000000000000000000000000000000000000000
droMoj3
CT---------CAGGTG-----------------CA------------------------------------------------------------AACGTTGCAGGGTCATCAGATCATTGGCAACTTGAATCAGGTGAA--TATGACTGATTTTCAACAGCAACA---ACAA------CAGCAACAGCAGCAG---CAA------CAACAAC---------------------------A---GC------A---GCAGCAAC------AGCAACA------ACAACCACCACAGACGCTTTGAGTAGCA-----AGCTCTCACT---TATGACAA-------------------------------AAATCGAACCGAA-TCATACACCCAC-----------TATT--ATAGACCC-------AATC-CA---ASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.............GGTG-----------------CA------------------------------------------------------------AACGTTGCAGGGTCA.......................................................................................................................................................................................................................................................................................................................................2111.001000100
.......................................................................................................................................................................................................................................................................................................AGACGCTTTGAGTAGCA-----AG.......................................................................................................................1911.001100000
...................................A------------------------------------------------------------AACGTTGCAGGGTCATCAGATC................................................................................................................................................................................................................................................................................................................................2311.001100000
.............................................................................................................................................................................................................................................................................................................................................GACAA-------------------------------AAATCGAACCGAA-TC.....................................................2011.001100000
.............................................................................................................CATCAGATCATTGGCAACTTGAAT.................................................................................................................................................................................................................................................................................................................2411.001100000
................................................................................................AACGTTGCAGGGTCATCA....................................................................................................................................................................................................................................................................................................................................1811.001000100
...................................................................................................................................................................................................................................................................................................................................................................................ATCGAACCGAA-TCATACACC..............................................2011.001000010
....................................................................................................................................................................................................................AC---------------------------A---GC------A---GCAGCAAC------AGCAACA------..........................................................................................................................................................21200.408800000
.................................................................................................................................................................................................................ACAAC---------------------------A---GC------A---GCAGCAAC------A......................................................................................................................................................................18200.102000020
...................................................................................................................................................................................................................AAC---------------------------A---GC------A---GCAGCAAC------AGCAACA------..........................................................................................................................................................22200.102002000
........................................................................................................................................................................................................A------CAACAAC---------------------------A---GC------A---GCAGCA...............................................................................................................................................................................18200.102000020
...........................................................................................................................................................................................AGCAGCAG---CAA------CAACAAC---------------------------A---G................................................................................................................................................................................................20200.051000010
............................................................................................................................................................CAACAGCAACA---ACAA------CAGCAACAGCAGC.....................................................................................................................................................................................................................................................28200.051100000
.................................................................................................................................................................GCAACA---ACAA------CAGCAACAGC........................................................................................................................................................................................................................................................20200.051100000
......................................................................................................................................................................A---ACAA------CAGCAACAGCAGCAG---CAA------C......................................................................................................................................................................................................................................24200.051100000
........................................................................................................................................................................................................A------CAACAAC---------------------------A---GC------A---GCAGCAAC------AGC....................................................................................................................................................................23200.051100000
..................................................................................................................................................................................................G---CAA------CAACAAC---------------------------A---GC------A---GCAGCAAC------A......................................................................................................................................................................24200.051100000
...........................................................................................................................................................................CAA------CAGCAACAGCAGCAG---CAA------CA.....................................................................................................................................................................................................................................23200.051001000
..........................................................................................................................................................................ACAA------CAGCAACAGCAGCAG---CAA------CAACA..................................................................................................................................................................................................................................27200.051100000
.......................................................................................................................................................................................CAACAGCAGCAG---CAA------CAACAAC---------------------------A---GC------A---G....................................................................................................................................................................................27200.051000010
..........................................................................................................................................................................ACAA------CAGCAACAGCAGCAG---CA..............................................................................................................................................................................................................................................21200.051000010
.................................................................................................................................................................................................AG---CAA------CAACAAC---------------------------A---GC------A---GCAGCAAC------AGC....................................................................................................................................................................27200.051100000
.................................................................................................................................................................................................................ACAAC---------------------------A---GC------A---GCAGCAAC------AGCAACA------..........................................................................................................................................................24200.051000010
droWil2
CA---------CCGG-------------------CA-AATCCTGCTCATGAGAATGTACGCAGTTGGCTA----AGG-------------------AAAATTGCAG-----------------------AAATCCAAC--G--TACAGCCGAACGTCAGCAACAGCA---ACAAAAAGAGCAGCAGCAGCAGCAG---CAG---CAGCAACAACAACAACAGC------------AGCAGCA---AC------A---ACAGCGAC------AACAACC------ACAACCACAACAA-CAC---------------------------------------AGCATTT------------------CAACC----AAGTTGGAGGT---------------------------------------A--------TC---SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................................................................ACAGC------------AGCAGCA---AC------A---ACA..................................................................................................................................................................................18200.35700070
................................................................................................................................................................................................................AACAACAACAACAGC------------AGCAGC.....................................................................................................................................................................................................21200.20400040
...................................................................................................................................................................................................................AACAACAACAGC------------AGCAGCA---AC------.........................................................................................................................................................................................21200.15300030
...............................................................................................................................................................................................................CAACAACAACAACAGC------------AGC........................................................................................................................................................................................................19200.10202000
..................................................................................................................................................................................AGCAGCAGCAGCAGCAG---CAG---CA........................................................................................................................................................................................................................................22200.10200020
........................................................................................................................................................................................................G---CAGCAACAACAACAACAG........................................................................................................................................................................................................................19200.05101000
........................................................................................................................................................................................AGCAGCAGCAG---CAG---CAGCAAC...................................................................................................................................................................................................................................21200.05100010
...............................................................................................................................................................................................................CAACAACAACAACAGC------------AGCAGCA---AC------A---AC...................................................................................................................................................................................28200.05100010
...................................................................................................................................................................................................................AACAACAACAGC------------AGCAGCA---.................................................................................................................................................................................................19200.05100001
........................................................................................................................................................................................................G---CAGCAACAACAACAACAGC------------AGCAGCA---.................................................................................................................................................................................................27200.05100010
.............................................................................................................................................................................................................AGCAACAACAACAACAGC------------AGC........................................................................................................................................................................................................21200.05101000
..............................................................................................................................................................................................................GCAACAACAACAACAGC------------AGCA.......................................................................................................................................................................................................21200.05100010
........................................................................................................................................................................................AGCAGCAGCAG---CAG---CAGCAACA..................................................................................................................................................................................................................................22200.05100010
................................................................................................................................................................................................CAG---CAG---CAGCAACAACAACA............................................................................................................................................................................................................................20200.05101000
..................................................................................................................................................................................................................CAACAACAACAGC------------AGCAGCA---AC------A---A....................................................................................................................................................................................24200.05100010
.............................................................................................................................................................................................................AGCAACAACAACAACAGC------------AG.........................................................................................................................................................................................................20200.05100010
.............................................................................................................................................................................................CAGCAG---CAG---CAGCAACAACAACAACAG........................................................................................................................................................................................................................27200.05101000
.............................................................................................................................................................................................................AGCAACAACAACAACAGC------------AGCAGCA---AC------.........................................................................................................................................................................................27200.05100010
................................................................................................................................................................................AGAGCAGCAGCAGCAGCAG---CA..............................................................................................................................................................................................................................................21200.05100010
...............................................................................................................................................................................................................CAACAACAACAACAGC------------AGCAGCA---A................................................................................................................................................................................................24200.05100100
.......................................................................................................................................................................................................AG---CAGCAACAACAACAACAGC------------A..........................................................................................................................................................................................................22200.05100010
............................................................................................................................................................................................................................AGC------------AGCAGCA---AC------A---ACAGC................................................................................................................................................................................18200.05100010
.....................................................................................................................................................................................................................CAACAACAGC------------AGCAGCA---AC------A---ACAG.................................................................................................................................................................................24200.05101000
............................................................................................................................................................................................................CAGCAACAACAACAACAGC------------AG.........................................................................................................................................................................................................21200.05101000
dp5
CC---------CAATCG-----------------ACGACGCTCGCTGACAAAGCCGGAAACTGTTAGCTATTTCAAGAAGATCCTGGGATAGAGCAGAG---GCAGAGA------------------CAGAGGCAGAGGCA--GAGTATGGGGCATCGGCAACGGCA---TCGG------CAGAAGCATCAGCCT---CAA---CAGCATCCATAGCAGCAGCAGCAGC------AGCAGCA---GC------A---GCAGCAGTAGCAGTAGCAC-----------------------TCCCCAGT--------------------------------------------------------------------AACCGTAATCGTAGCCTTAA----CAGTAACTGTTAACAC----CCATTT------CCG---CSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................GGGCATCGGCAACGGCA---T...........................................................................................................................................................................................................................................................................1830.3310100000000
.....................................................................................................................................................................................................................................................GC------A---GCAGCAGTAGCAGTAG.....................................................................................................................................................................19180.0610000100000
.......................................................................................................................................................................................................................GCAGCAGCAGCAGC------AGCAGC.....................................................................................................................................................................................................20200.0510010000000
..............................................................................................CAGAG---GCAGAGA------------------CAGAGGCAG..............................................................................................................................................................................................................................................................................................................21200.0510100000000
droPer2
CTGATAAAATGCAAATGCAAATGAAGCAACGCCAGCAGA-----------------------------------------------------AGCAGCAGCAGCAACAGCAGCAGA---------------------AACAGCA--------GCAGCAGCAACAGCAGCAACAA------CAGCAACAGCAGCAA---CAG------CAGCAACAGCAACAGCAGCAAC------AGCAACA---GC------A---GCAGCAGCAACAACAGCAA-------------------------------CAGCA-------------AC------------------------------------------------AACAGCAACAGCAGCAGCAG----CA------GC-----------------AAGTTTTT---GSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................................................................................................................A-------------AC------------------------------------------------AACAGCAACAGCAGCAGCAG----CA------...............................25150.071001000
.....................................................................................................................................................................................................................................................................................................................................AC------------------------------------------------AACAGCAACAGCAGCAGCAG----CA------...............................24190.051010000
......................................................................................................................................................................................................................................................................................................................................C------------------------------------------------AACAGCAACAGCAGCAGCAG----.......................................21200.051001000
.......................................................................................................................................................................................................................................................................................................................A-------------AC------------------------------------------------AACAGCAACAGCAGCAGC.............................................21200.051001000
............................................................................................................................................................................................................................................GCAACA---GC------A---GCAGCAGCAACA.........................................................................................................................................................................21200.051001000
droAna3
CC---------CAGGTT-----------------CA------------------------------------------------------------GACCCTGCAGGGCCATCAGATCATAAGCAATTTGAATCAGGTGAA--TATGACTGATTTCCAGCAACAACA---GCAA------CAGCAACAACAGCAG---CAA---CAGCAACAACAGCAACAACAACAGCAGC---AACAGCA---AC------A---ACAGCAAC------AGCAAAC---ACAACAACCACAACAGACGCTCTGATC------------------------------------------------------------------AG--------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......................................................................................................................................................................................................AA---CAGCAACAACAGCAACAACAACAG..................................................................................................................................................................................................................2611.001010000
.......................................................................................................................................................ATTTCCAGCAACAACA---GCAA------CA................................................................................................................................................................................................................................................................2211.001010000
.............................................................................................................................ATTTGAATCAGGTGAA--TATGACT................................................................................................................................................................................................................................................................................................2311.001010000
............................................................................................................................................A--TATGACTGATTTCCAGCAACAAC................................................................................................................................................................................................................................................................................2411.001010000
..............GTT-----------------CA------------------------------------------------------------GACCCTGCAGGGCCATC.....................................................................................................................................................................................................................................................................................................................................2211.001010000
................................................................................................................................................................................................................................................CA---AC------A---ACAGCAAC------AGCAAAC---AC...........................................................................................................................................................2211.001010000
..........................................................................................................GGCCATCAGATCATAAGCA.........................................................................................................................................................................................................................................................................................................................1911.001000001
...................................................................................................................................................................................................................................................................................AAC---ACAACAACCACAACAGACGCTC.......................................................................................................................................2511.001100000
......................................................................................................................................................................................................................................................................AAC------AGCAAAC---ACAACAACCAC..................................................................................................................................................2111.001010000
................................................................................................................................................................................................................................................................................GCAAAC---ACAACAACCACAACAGACGCT........................................................................................................................................2711.001010000
...................................................................................................................................................................AACA---GCAA------CAGCAACAACAGCAG---CAA---C.........................................................................................................................................................................................................................................2720.501010000
................................................................................................................................................................................................................AACAACAGCAACAACAACAGCAGC---AAC........................................................................................................................................................................................................2740.251100000
........................................................................................................................................................................................AACAACAGCAG---CAA---CAGCAACAACAGC.............................................................................................................................................................................................................................2760.171010000
..................................................................................................................................................................................................................................AGCAGC---AACAGCA---AC------A---ACAGCAAC------AG.....................................................................................................................................................................2660.171010000
................................................................................................................................................................................................................AACAACAGCAACAACAACAGCAGC---...........................................................................................................................................................................................................2460.171010000
............................................................................................................................................................................................................................AACAACAGCAGC---AACAGCA---AC------A---ACAGC................................................................................................................................................................................2760.171010000
.....................................................................................................................................................................................................................................AGC---AACAGCA---AC------A---ACAGCAAC------AGCA...................................................................................................................................................................2570.141010000
...........................................................................................................................................................................................................................CAACAACAGCAGC---AACAGCA---AC------A---ACA..................................................................................................................................................................................2690.111100000
.......................................................................................................................................................................................CAACAACAGCAG---CAA---CAGCAACAACA...............................................................................................................................................................................................................................2690.111100000
...............................................................................................................................................................................................................CAACAACAGCAACAACAACAGC.................................................................................................................................................................................................................22130.081010000
...................................................................................................................................................................AACA---GCAA------CAGCAACAACAGC.....................................................................................................................................................................................................................................................21170.061010000
........................................................................................................................................................................................................................CAACAACAACAGCAGC---AACAGC.....................................................................................................................................................................................................22170.061010000
...............................................................................................................................................................................................................................AACAGCAGC---AACAGCA---AC------A---ACA..................................................................................................................................................................................22180.061010000
...........................................................................................................................................................................................AACAGCAG---CAA---CAGCAACAACA...............................................................................................................................................................................................................................22180.061010000
..........................................................................................................................................................................................................................ACAACAACAGCAGC---AACAGCA---.................................................................................................................................................................................................21180.061010000
..............................................................................................................................................................................................AGCAG---CAA---CAGCAACAACAGC.............................................................................................................................................................................................................................21200.051010000
...............................................................................................................................................................................................................................AACAGCAGC---AACAGCA---AC------A---A....................................................................................................................................................................................20200.051010000
......................................................................................................................................................................................GCAACAACAGCAG---CAA---CAGC......................................................................................................................................................................................................................................20200.051100000
.......................................................................................................................................................................................CAACAACAGCAG---CAA---CAGCA.....................................................................................................................................................................................................................................20200.051010000
..............................................................................................................................................................................................................................CAACAGCAGC---AACAGCA---AC------A---AC...................................................................................................................................................................................22200.051010000
....................................................................................................................................................................................CAGCAACAACAGCAG---CAA---C.........................................................................................................................................................................................................................................19200.051010000
..........................................................................................................................................................................................CAACAGCAG---CAA---CAGCAACAAC................................................................................................................................................................................................................................22200.051010000
..................................................................................................................................................................................................................................AGCAGC---AACAGCA---AC------A---ACAGC................................................................................................................................................................................21200.051010000
........................................................................................................................................................................................................................CAACAACAACAGCAGC---AAC........................................................................................................................................................................................................19200.051000001
...........................................................................................................................................................................................AACAGCAG---CAA---CAGCAACAA.................................................................................................................................................................................................................................20200.051010000
droBip1
CC---------CAGGTT-----------------CA------------------------------------------------------------GACCCTGCAGGGCCATCAGATCATAGGCAATTTAAATCAGGTGAA--TATGACTGATTTCCAGCAACAACA---ACAA------CAGCAACAGCAGCAA---CAA---CAGCAGCAACAGCAACAACAGCAGC------AGCAACAACCACCACCACA---ACAACAAC------AGCAAAC------ACAACCACAACAGACGCTCTGATC------------------------------------------------------------------AG--------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
CT---------ACAACA----------------------------------------------------------------------------ACAACCGCTACAACAACAACGTG---------------------CACTACCACGACC--------GCCACAACAACAACTG------CTACAACAACAACCG---CTA------CAACA---------------------------------AC------A---ACCGCTACAACAACAACGTGC------ACTACCACAACCGCCACAACAA-CAACA-------------TGCACAACAACAACCTGCACTCCGATACAAGCTGAGACTACGACAACCTGCGCTCA-ATCTCCGGAGACTACAA------CAACCTG---TGCCC-------AATCTCC---ASizeHit CountTotal NormTotal
No Reads
droFic1
CC---------CAGGTG-----------------CA------------------------------------------------------------GACGCTGCAGGGCCATCAGATCATAGGCAATCTAAATCAGGTGAA--TATGACTGACTTCCAGCAACAACA---ACAA------CAGCAGCAACAGCAACAGCAGCAGCAGCAACAACAGCAACAGCAGCAGC------AACAACA---AC------A---GCAGCAAC------AGCAAAC------ACAACCACAACAGACGCTCTGATC------------------------------------------------------------------GGACCGAAAACCTAGATCCA-----------CTATTCAATA----TAATTA---A----TT---SizeHit CountTotal NormTotal
No Reads
droEle1
CC---------CAGGTG-----------------CA------------------------------------------------------------GACGCTGCAGGGTCATCAGATCATAGGCAATTTAAATCAGGTGAA--TATGACTGACTTCCAACAACAACA---ACAG------CAGCAGCAGCAGCAA---CAA---CAGCAGCAACAGCAACAACAACAAC------AACAACA---GC------A---GCAGCAAC------AGCAAAC------ACAACCACAACAGACGCTCTGATC------------------------------------------------------------------GGACCGCAATCGTAGATCCAC----CATGTACTATTCTATA----TAATTA--------TTGTTSizeHit CountTotal NormTotal
No Reads
droRho1
CC---------CAAGTG-----------------CA------------------------------------------------------------GACGCTGCAGGGCCATCAGATCATAGGCAATTTAAATCAGGTGAA--TATGACTGACTTCCAACAACAGCA---GCAG------CAGCAACAACAACAG---CAA---CAACAACAACAAC------------------AACAACA---GC------A---GCAGCAAC------AGCAAAC------ACAATCACAACAGACGCTCTGA------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
CC---------CAGGTG-----------------CA------------------------------------------------------------GACGCTGCAGGGCCATCAGATCATAGGCAATTTAAATCAGGTGAA--TATGACTGACTTCCAGCAGCAACA---ACAG------CAGCAGCAGCAGCAG---CAG---CAACAGCAGCAGCAGCAAC------------AACAGCA---GC------A---GCAGCAAC------AGCAAAC------ACAACCACAACAGACGCTCTGA------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
CC---------CAGGTG-----------------CA------------------------------------------------------------GACGCTGCAGGGCCATCAGATCATAGGCAATTTAAATCAGGTGAA--TATGACTGACTTCCAGCAACAACA---GCAG------CAGCAGCAACAGCAA---CAA---CAGCAGCAGCAGC------------------AACAACA---AC------A---GCAGCAAC------AGCAAAC------ACAATCACAACAGACGCTCTGATC------------------------------------------------------------------GGACCGAAGACGTAGATCCAC----TATGTACTATTCTATA----TAATTA--------TT---SizeHit CountTotal NormTotal
No Reads
droEug1
CC---------CAGGTT-----------------CA------------------------------------------------------------GACGCTGCAGGGTCATCAGATCATAGGCAATATAAATCAGGTGAA--TATGACTGACTTCCAGCAACAACA---ACAG------CAGCAGCAGCAACAA---CAA---CAACAGCAGCAGCAACAACAACAGCAGC---AGCAGCA---AC------A---ACAGCAAC------AGCAAA------------CACAACAGACGCTTTGAACG-----------------------------------------------------------------GGACCGAACACACAATTCTA---------TATAGTTCTATA----TAATAATTAATTTTT---GSizeHit CountTotal NormTotal
No Reads
dm3
CC---------CAGGTG-----------------CA------------------------------------------------------------GACGCTGCAGGGCCATCAGATCATAGGCAATTTAAATCAGGTGAA--TATAACTGACTTTCAACAACAACA---ACCG------CAGCAGCAACAACAG---CAG---CAGCAACAAC---------AGCAGC------AACAACA---AC------A---ACAGCAAC------AGCAAA------------CACAACAGACGCTCTGATC------------------------------------------------------------------GGACCGAAGTCTTAGATCCAT----CTTGTACTATTCTATA----CAATTA--------TT---SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...........................................................................................................................................................................................................................................................................................................GCTCTGATC------------------------------------------------------------------GGACCGAAGTCTTAGA................................................25137.0037000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000152301000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TC------------------------------------------------------------------GGACCGAAGTCTTAGA................................................18119.00190000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003424600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................CGCTCTGATC------------------------------------------------------------------GGACCGAAGTCTTAGA................................................26116.001600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000001000100000000000000000100110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TC------------------------------------------------------------------GGACCGAAGTCTTAGATC..............................................20112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005010600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TC------------------------------------------------------------------GGACCGAAGTCTTAGATCCAT----CT.....................................25110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002420200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................GACGCTCTGATC------------------------------------------------------------------GGACCGAAGTCT....................................................2416.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................AA------------CACAACAGACGCTCTGATC------------------------------------------------------------------GGACC...........................................................2615.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020200000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................CTCTGATC------------------------------------------------------------------GGACCGAAGTCTTAGA................................................2415.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................CACAACAGACGCTCTGATC------------------------------------------------------------------GGACCGAA........................................................2715.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................CGAAGTCTTAGATCCAT----CTTGT..................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................TC------------------------------------------------------------------GGACCGAAGTCTTAGAT...............................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TCCAT----CTTGTACTATTCTATA----CAATTA--------TT---2914.0040000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................TCATAGGCAATTTAAATCAGGTGAA--.......................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................ATC------------------------------------------------------------------GGACCGAAGTCTTAGATCCAT----CT.....................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................TCTGATC------------------------------------------------------------------GGACCGAAGTCTTAGA................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
...........................................................................................................................................................................................................................................................................................................GCTCTGATC------------------------------------------------------------------GGACCGAAGTCTTAGAT...............................................2613.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100010000000000000000000000000
..............................................................................................................ATCAGATCATAGGCAATTTAAAT.................................................................................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................TCTGATC------------------------------------------------------------------GGACCGAAGTCTTAGAT...............................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...................................................................................................................................................................................................................................................................................................CAACAGACGCTCTGATC------------------------------------------------------------------GGACCGAAGT......................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................A------------CACAACAGACGCTCTGATC------------------------------------------------------------------GGACC...........................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................TCCAT----CTTGTACTATTCTATA----CAAT...............2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................TCTGATC------------------------------------------------------------------GGACCGAAGTCTTAGATC..............................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................GACGCTCTGATC------------------------------------------------------------------GGACCGAAGTCTTAGA................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
................................................................................................................................................................................................................................................................................GCAAA------------CACAACAGACGCTCTGATC------------------------------------------------------------------GGA.............................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................CAACAGACGCTCTGATC------------------------------------------------------------------GGAC............................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................CTCTGATC------------------------------------------------------------------GGACCGAAGTCTTAGAT...............................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000
.................................................................................................................................................................................................................................................................................................CACAACAGACGCTCTGATC------------------------------------------------------------------GGACCGAAG.......................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000001000000000000000000
......................................................................................................................................................................................................................................................................................................CAGACGCTCTGATC------------------------------------------------------------------GGACCGA.........................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.....................................................................................................................................................................................................................................................................................................................................................................................................ATCCAT----CTTGTACTATTCTATA----CAAT...............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.....................................................................................................................................................................................................................................................................................................ACAGACGCTCTGATC------------------------------------------------------------------GGACCGAAGT......................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................CTCTGATC------------------------------------------------------------------GGACCGAAGTCTTA..................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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......................................................................................................................................................................................................................................................C------A---ACAGCAAC------AGCAAA------------CACAACAGA............................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................AA------------CACAACAGACGCTCTGATC------------------------------------------------------------------GGACCG..........................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CAGGTG-----------------CA------------------------------------------------------------GACGCTGCAGGGC.........................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
........................................................................................................................................................................................................................................................................................................GACGCTCTGATC------------------------------------------------------------------GGACCGAAGTCTTAGAA...............................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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....................................................................................................CTGCAGGGCCATCAGATCATAGGCAA........................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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................................................................................................................................................................AACAACA---ACCG------CAGCAGCAACAACAG---C...............................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.................................................................................................................AGATCATAGGCAATTTAAATCAGGT............................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............TG-----------------CA------------------------------------------------------------GACGCTGCAGGGCCAT......................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................................................................................................................................................................................................................................................A---AC------A---ACAGCAAC------AGCAAA------------CACAACAGAC...........................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.................................................................................................................................................................................................................................................................................CAAA------------CACAACAGACGCTCTGATC------------------------------------------------------------------GGACC...........................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
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..........................................................................................................................................................................ACCG------CAGCAGCAACAACAG---CAG---CAGCAACA..................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................GTCTTAGATCCAT----CTTGTACTATTCTA.........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.................................................................................................................................................................................................................................................................................CAAA------------CACAACAGACGCTCTGATC------------------------------------------------------------------GGA.............................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................ACAACAGACGCTCTGATC------------------------------------------------------------------GGA.............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.........................................................................................................................................................................................................................................................................................................ACGCTCTGATC------------------------------------------------------------------GGACCGAAG.......................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................ATAGGCAATTTAAATCAGGTGAA--T......................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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CC---------CAGGTG-----------------CA------------------------------------------------------------GACGCTGCAGGGC.........................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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............................................................................................................................................................................................................................................................................................................CTCTGATC------------------------------------------------------------------GGACCGAAGT......................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................GACGCTCTGATC------------------------------------------------------------------GGACCGAA........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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.......................................................................................................................................................................................CAGCAACAACAG---CAG---CAGCAACAAC---------.......................................................................................................................................................................................................................25190.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
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...............................................................................................................................................................................................................................AGCAGC------AACAACA---AC------A---ACAGC................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
................................................................................................................................................................................................................AACAAC---------AGCAGC------AACAACA---AC------.........................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
...............................................................................................................................................................................................................................AGCAGC------AACAACA---AC------A---ACAGCA...............................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................AGC------AACAACA---AC------A---ACAGCAA..............................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................C---------AGCAGC------AACAACA---AC------A---AC...................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droSim2
CC---------CAGGTG-----------------CA------------------------------------------------------------GACGCTGCAGGGCCATCAGATCATAGGCAATTTAAATCAGGTGAA--TATGACTGACTTTCAACAACAACA---ACAG------CAGCAACAGCAGCAG---CAG---CAGCAACAACAGCAGCAGCAGCAGCAACAACAAC---A---AC------AACAACAACAAC------------CGCAACAGCAAACACAACAGACGCTCTGATC------------------------------------------------------------------GGACCGAAGTCATAGATCCAC----CTTGTACTATTCTATA----CGATTA--------TT---SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..................................................................................................................................................................CAACA---ACAG------CAGCAACAGCA.......................................................................................................................................................................................................................................................20202.7054000054000000000000
.......................................................................................................................................................................................................................................................................................................AGACGCTCTGATC------------------------------------------------------------------GGACC...........................................................1812.00200200000000000000
..............................................................................................................................................................................................................................................................................................AAACACAACAGACGCTCTGATC------------------------------------------------------------------GGACC...........................................................2711.00101000000000000000
...................................................................................................................................................................................................................................................................................................CAACAGACGCTCTGATC------------------------------------------------------------------GGACCGAAGT......................................................2711.00100100000000000000
...................................................................................................................................................................................................................................................................................................CAACAGACGCTCTGATC------------------------------------------------------------------GGG.............................................................2011.00101000000000000000
.................................................................................................................................................................................................................................................................................................................ATC------------------------------------------------------------------GGACCGAAGTCATAGAT...............................................2011.00100100000000000000
...............................................................................................................................................................................................................................................................................................AACACAACAGACGCTCTGATC------------------------------------------------------------------GGACC...........................................................2611.00110000000000000000
..................................................................................................................................AATCAGGTGAA--TATGACTGACTTTCAAC......................................................................................................................................................................................................................................................................................2811.00100010000000000000
..............................................................................................................................................................................................................................................................................................................CTGATC------------------------------------------------------------------GGACCGAAGTCATA..................................................2011.00101000000000000000
..................................................................................................................................................................................................................................................................................................ACAACAGACGCTCTGATC------------------------------------------------------------------................................................................1811.00110000000000000000
..............................................................................................................................................................................................................................................................................................................CTGATC------------------------------------------------------------------GGACCGAAGTCATAGATCCAC----C......................................2811.00110000000000000000
...............................................................................................................TCAGATCATAGGCAATTTAAATCAGGTGAA--.......................................................................................................................................................................................................................................................................................................3011.00100000010000000000
........................................................................................................................................................................................................................................................................................................GACGCTCTGATC------------------------------------------------------------------GGACCGAAGTCATA..................................................2611.00100000000000010000
.............................................................................................................................................................................................................................................................................................................TCTGATC------------------------------------------------------------------GGACCGAAGTCATAG.................................................2211.00100000000001000000
...................................................................................................................................ATCAGGTGAA--TATGACTGACTTTCAACAA....................................................................................................................................................................................................................................................................................2911.00100010000000000000
.............................................................................................................................................................................................................................................................................................................TCTGATC------------------------------------------------------------------GGACCGAAGTCATAGATCCA............................................2711.00100000000001000000
..................................................................................................................................................................CAACA---ACAG------CAGCAACAGCAGCAG---................................................................................................................................................................................................................................................24100.10100000000000100000
...................................................................................................................................................................AACA---ACAG------CAGCAACAGCAGCA....................................................................................................................................................................................................................................................22120.08100000000000100000
...............................................................................................................................................................................................................CAACAACAGCAGCAGCAGCAGC.................................................................................................................................................................................................................22200.05100000000000100000
droSec2
CC---------CAGGTG-----------------CA------------------------------------------------------------GACGCTGCAGGGCCATCAGATCATAGGCAATTTAAATCAGGTGAA--TATGACTGACTTTCAACAACAACA---ACAG------CAGCAACAGCAACAG---CAG---CAGCAGCAACAACAGCAGCAGCAGC------AGCAACA---AC------A---ACCGCAAC------AGCAAA------------CACAACAGACGCTCTGATC------------------------------------------------------------------GGACCGAAGTCATAGATCCAC----CTTGTACTATTCTATA----CGATTA--------TT---SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................................................................................CAACAGACGCTCTGATC------------------------------------------------------------------GGACCGA.........................................................2411.0010100
...............................................................................................................................................................................................................................................................................................................................................................................................TCATAGATCCAC----CTTGTACTATT............................2311.0011000
..........................................................................................................................................GAA--TATGACTGACTTTCAACAACAACA---............................................................................................................................................................................................................................................................................2711.0011000
.......................................................................................................................................................................................................................................................................................................AGACGCTCTGATC------------------------------------------------------------------GGACCGAAGT......................................................2311.0010010
...............................................................................................................................................................................................................................................................................AGCAAA------------CACAACAGACGCTCTGATC------------------------------------------------------------------G...............................................................2611.0010100
............................................................................................................................................................CAACAACAACA---ACAG------CAGCAAC...........................................................................................................................................................................................................................................................22120.0810100
..................................................................................................................................................................................................................CAACAACAGCAGCAGCAGC------A..........................................................................................................................................................................................................20200.0510010
...................................................................................................................................................................................................................AACAACAGCAGCAGCAGC------A..........................................................................................................................................................................................................19200.0510010
....................................................................................................................................................................................................................ACAACAGCAGCAGCAGC------AGCA.......................................................................................................................................................................................................21200.0510010
...............................................................................................................................................................................................ACAG---CAG---CAGCAGCAACAAC.............................................................................................................................................................................................................................20200.0510010
.........................................................................................................................................................................................ACAGCAACAG---CAG---CAGCAGCAACA...............................................................................................................................................................................................................................24200.0510010
droYak3
CC---------CAGGTG-----------------CA------------------------------------------------------------GACGCTGCAGGGCCATCAGATCATTGGCAATTTGAATCAGGTGAA--TATGACTGACTTTCAACAACAACA---GCAA------CAGCAGCAGCAGCAG---CAA---CAACAGCAGCAGCAACAGCAGCAGC------AACAACA---AC------A---GCAGCAAC------AGCAAA------------CACAACAGACGCTCTGATC------------------------------------------------------------------GGACCGAAGTCTTAGATCCAC----CTTGTACTATTCTATA----CAAATA--------TT---SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...........................................................................................................................................................................................................................................AACAACA---AC------A---GCAGCAAC------AGCAAA------------CA...................................................................................................................................................2611.00101000000000
.............................................................................................................CATCAGATCATTGGCAATTT.....................................................................................................................................................................................................................................................................................................................2011.00100000010000
....................................................................................................................................................................................................................................................................................................AACAGACGCTCTGATC------------------------------------------------------------------GGACCGAAGT......................................................2611.00100000010000
................................................................................................................................................................................................................................................................................GCAAA------------CACAACAGACGCTCTGATC------------------------------------------------------------------................................................................2411.00110000000000
...................................................................................................................................................................................................................................................................................AA------------CACAACAGACGCTCTGATC------------------------------------------------------------------GGAC............................................................2511.00100001000000
..............................................................................................................................................................................................................................................................................................................CTGATC------------------------------------------------------------------GGACCGAAGTCTTAGAT...............................................2311.00100000010000
....................................................................................................................................................................................................................................................................................................AACAGACGCTCTGATC------------------------------------------------------------------GGACCGA.........................................................2311.00100010000000
....................................................................................................................................................................................................................................................................................................AACAGACGCTCTGATC------------------------------------------------------------------GGACCGAA........................................................2411.00100000010000
.............................................................................................................CATCAGATCATTGGCAATTTGAATCAGGC............................................................................................................................................................................................................................................................................................................2911.00100000010000
................................................................................................................................................................AACAACA---GCAA------CAGCAGCAGCAGCAG---C...............................................................................................................................................................................................................................................2740.25100100000000
............................................................................................................................................................................................................................AGCAGCAGC------AACAACA---AC------A---GCAGCAAC------.......................................................................................................................................................................2790.11100000000001
............................................................................................................................................................................................GCAGCAG---CAA---CAACAGCAGCA...............................................................................................................................................................................................................................21200.10202000000000
....................................................................................................................................................................................................................................C------AACAACA---AC------A---GCAGCAAC------AGC....................................................................................................................................................................22180.06100100000000
...............................................................................................................................................................................................GCAG---CAA---CAACAGCAGCAGCAACAGCAGC....................................................................................................................................................................................................................29180.06100100000000
.............................................................................................................................................................................A------CAGCAGCAGCAGCAG---CA..............................................................................................................................................................................................................................................18200.05100010000000
.............................................................................................................................................................................A------CAGCAGCAGCAGCAG---CAA---CAACAGC...................................................................................................................................................................................................................................26200.05100100000000
..........................................................................................................................................................................GCAA------CAGCAGCAGCAGCAG---CA..............................................................................................................................................................................................................................................21200.05100001000000
.......................................................................................................................................................................................CAGCAGCAGCAG---CAA---CAACAGCAGC................................................................................................................................................................................................................................25200.05100000000001
....................................................................................................................................................................................................................GCAGCAACAGCAGCAGC------A..........................................................................................................................................................................................................18200.05100100000000
........................................................................................................................................................................................................................CAACAGCAGCAGC------AACAACA---AC------A---GCA..................................................................................................................................................................................26200.05101000000000
..............................................................................................................................................................................................AGCAG---CAA---CAACAGCAGCAGCAACAGC.......................................................................................................................................................................................................................27200.05100100000000
...............................................................................................................................................................................................GCAG---CAA---CAACAGCAGCAGCAACAGC.......................................................................................................................................................................................................................26200.05101000000000
...............................................................................................................................................................................................GCAG---CAA---CAACAGCAGCAGCAAC..........................................................................................................................................................................................................................23200.05101000000000
.........................................................................................................................................................................................GCAGCAGCAG---CAA---CAACAGCAG.................................................................................................................................................................................................................................22200.05101000000000
droEre2
CT---------CAGGTG-----------------CA------------------------------------------------------------GACGCTGCAGGGCCATCAGATCATCGGCAATTTGAATCAGGTGAA--TATGACTGACTTTCAACAACAACA---GCAG------CAGCAACAGCAACAA---CAA---CAGCAGCAGCAACAGC---AGC---------AGCAACA---AC------A---GCAGCAAC------AGCAAA------------CACAACAGACGCTCTGATC------------------------------------------------------------------GGACCGAAGTCTTAGATCCAC----CTTGTACTATTCTATA----CAAATA--------TT---SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................CAACAA---CAA---CAGCAGCAGCAACAGC---AGC---------AGC........................................................................................................................................................................................................3132.0060000006
..............................................................................................................................................................................................AACAA---CAA---CAGCAGCAGCAACAGC---AGC---------...........................................................................................................................................................................................................2771.1480000008
....................................................................................................................................................................................................................................................................................................AACAGACGCTCTGATC------------------------------------------------------------------GGACCGAAGT......................................................2611.0010000010
.T---------CAGGTG-----------------CA------------------------------------------------------------GACGCTGCAGG...........................................................................................................................................................................................................................................................................................................................................2011.0011000000
....................................................................................................................................................................................................................................................................................................AACAGACGCTCTGATC------------------------------------------------------------------GGACCG..........................................................2211.0010000100
.........................................................................................................................................................TTTCAACAACAACA---GCAG------CAGCG.............................................................................................................................................................................................................................................................2311.0010000010
....................................................................................................................................................................................................................................................................................................AACAGACGCTCTGATC------------------------------------------------------------------GGAC............................................................2011.0010000100
....................................................................................................................................................................................................................................................................................A------------CACAACAGACGCTCTGATC------------------------------------------------------------------GG..............................................................2211.0010001000
...............TG-----------------CA------------------------------------------------------------GACGCTGCAGGGCCATCAGATC................................................................................................................................................................................................................................................................................................................................2611.0010000001
....................................................................................................................................................................................................................................................................................A------------CACAACAGACGCTCTGATC------------------------------------------------------------------GGA.............................................................2311.0010000100
..........................................................................................................................................................................................................................................................................................................CGCTCTGATC------------------------------------------------------------------GGACCGAAGTCTT...................................................2311.0010000100
..............................................................................................................................................................................................AACAA---CAA---CAGCAGCAGCAACAGC---.......................................................................................................................................................................................................................24110.0910100000
.............................................................................................................................................................AACAACAACA---GCAG------CAGCAACAGC........................................................................................................................................................................................................................................................24110.0910100000
................................................................................................................................................................................................................................GC---------AGCAACA---AC------A---GCAGCAAC------AGC....................................................................................................................................................................23160.0610000100
.............................................................................................................................................................................................CAACAA---CAA---CAGCAGCAGCA...............................................................................................................................................................................................................................20200.0510100000
............................................................................................................................................................................................GCAACAA---CAA---CAGCAGCAGC................................................................................................................................................................................................................................20200.0511000000
......................................................................................................................................................................................................................AACAGC---AGC---------AGCAACA---AC------A---GCAGC................................................................................................................................................................................24200.0511000000
.......................................................................................................................................................................................................AA---CAGCAGCAGCAACAGC---AGC---------A..........................................................................................................................................................................................................22200.0510001000
.............................................................................................................................................................AACAACAACA---GCAG------CAGCAAC...........................................................................................................................................................................................................................................................21200.0510100000
....................................................................................................................................................................................................................GCAACAGC---AGC---------AGCAACA---AC------.........................................................................................................................................................................................20200.0511000000
.............................................................................................................................................................................................................................................CAACA---AC------A---GCAGCAAC------AGCA...................................................................................................................................................................20200.0511000000
..................................................................................................................................................................................................A---CAA---CAGCAGCAGCAACAGC---AG.....................................................................................................................................................................................................................22200.0511000000
..............................................................................................................................................................................................AACAA---CAA---CAGCAGCAGCAAC.............................................................................................................................................................................................................................21200.0510100000

Generated: 05/17/2015 at 10:18 PM