dgr_296

Name	Class	Family	Strand
TART_DV	LINE	Jockey	+

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------###############################################--- ATGCTGGTGCAGATGCTGCAGGACATAATGCAACGAAATTTCACATTGAATGCAGCGCAAATAAACATCAACAACAACAACAATAACAACAACAGCAGCAGCAGCAGCCGCAGCAGCAGCAAACATTTGAAGAGCCATAAAACTGGCCGAGCCTCAGCGCCCCAAGCCCCAACCATGCCCATGCTCAACATTACATGCCAGGCAACATTAGAAAACTGCAACAGCAGCAGCAGCAGCAGCAGCAGTGACGT ************************************************....((((....................................((.((.((.((....)).)).)).)).............((((......)))).........)))).............((((...(((.....)))..))))....************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M041 female body
..........................................................................................AACAGCAGCAGCAGCAGC...............................................................................................................................................	18	0	20	0.10	2	2
...............................................................................................CAGCAGCAGCAGCCGCAGCAGCA.....................................................................................................................................	23	0	20	0.05	1	1

Species	Coordinate	ID	Alignment
droGri2	scaffold_15110:5962054-5962304 +	dgr_296	ATGCTGGTGCAGAT---G---CT------------GCAGGACATAATGCA-AC-----------------------------G---------------------------------AA-------------------A----------------------------------------------------TTTC---ACAT---TGAAT-GCAGC----------GCAAATAAACATCAACAACAACAACAATAACAACAACAGCAGCAGCA----------------------------------GCAGCCGCAGCAG--------------------------------------C---A------------GCA------------------------------AACATTTGAAGA--------------------GCCATAAAACTGGCCGAGCCTCAGCGCCCCAAGCC-CCAACCATGCCCATGCTCAACATTACATGCCAGGCAACATTAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA--------------------------CTGCAACAGCAGCAGCAGCAGCAGC---A-------------------------------------------------------------------GCAGTGA-CGT
droVir3	scaffold_13049:6846190-6846475 -		CTGCTGCTGCAGTTGCAG---TTGCATT---TGCTGCAGGACATAAAACA-AC-----------------------------G---------------------------------AA-------------------A----------------------------------------------------TTTC---ACAT---TGAAT-GCGACG-CCGCAAACGCAAATAAACATC---------AGCAGC------------------AGCA-------------------------AAAGC------------AA--------------------------------------C---A------------GCA------------------------------AACATTTGAAGATGCCCCGCACCATGGACAGAGCCATAAAACTGGCCGAGCCTCA--------AGCCCCCAACCATGCCCATGCCCAAC-----ATGCCAGGCAACATTAGAAAACTGCAACAGCAGCAGCAGCAGCAGC---AGCCGCAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG--------------------------CAGTCGCAGCCAAAGCAGCGGCAGC---G-------------------------------------------------------------------GCAGCGA-CAG
droMoj3	scaffold_6680:5163116-5163408 -		ATGCTGCAG------------------------------GACATAAAACAAAC-----------------------------G---------------------------------AA-------------------A----------------------------------------------------TTTC---ACAT---TGAAT-GCAGCGCGCC-----GCAAATAAACATCATCAGCAGCAACAAAAACAACAACAACAACAACA----------------------------------ACAGCCGCAGCAG--------------------------------------C-------------GCAGCAGCAGCAACAG-CAGGGAGTCGCGTGCAGCAAACATTTGAAGATGCCCCGCACTCTGGACAGGGCCATAAAACTGGCTGAGCCTCA--------AGCCTCCAACCATGCCCATGCCCAAC-----ATGCCAGGCAACATTAGAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----CTGCA------AC----------------------------AG--------------------------CAGCAGCCGTAGAGGCAACGGCAGC---G-------------------------------------------------------------------GCAGCGG-AGG
droWil2	scf2_1100000003625:539-780 +		TGGCGA-TGGCAAT---G---CT------------GCAGCATCAGCAACA------------------ACA---ACA---GC------------------------A-------------------------------GCAACGAACGCAACAGCAACAGCAACAGCAGCAACAATTGCAGCAACAA----------------------CA-------------------------------GCAACAGC------------------------A-------------------------GCA--------------------------------------------------------------ACAATGGCAGCAACAACAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGC---AACAACAA-----------CTGC------AGCAGCAACAACAACAGCAGC------------------------------------AACAACAACAGCAGC----------------------------------------------------------------------AGCAACA------------------AC------------------A-----------GCATCAGCAAC----------------------------AGCA--ACAGCAG---------------CAACGAATGCAACAGCAACAGCAAC---A-------------------------------------------------------------------GCAACAG-CAA
dp5	3:11298371-11298619 +	dps_1160	AAGCCCGTGCCTCA---GTTGGC------------GGAGACCATGAAGCGACCCATCCACCAGCAGCAGCAACATCA---GC------------------------T----------------------------------------GCAGCAGCAGCAACAA------------------------------CAGCAGC-AACATCAACT-------------------------------GCAGCAGC------------------------A-------------------------GCA---TCA------------------------------GCAGCAGCAGCAG-----C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAC---TGCAGCAGA--------AGCAGC------AACAGCAACAACAGCAGCAGCAACATAAACATCAAC----------------------------------------------------------------------------------------------------------AGCAACA------------------ACA---GCAG--------------------C------A---------GCAACAT-------------------AA--ACATCAG---------------CAGCAACAGCAGCAGCAGCAACAAC---A-------------------------------------------------------------------GCAGCAG-CAA
droPer2	scaffold_2:5826633-5826862 -		GC--AGAAGCAGCA------------------------------------------------------------GCA---GC------------------------A---ACA-------------------------GCAGCAGAAACAGCAGCAGCAGCAA------------------------------CAG-------------CA-------------------------------GCAACAACAGC------------AAC------AGCAGCA-------------------ACA------------------------------------------GCAGCAA-----C------------------AGCAACAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAACAGCAACA-----------------------------------GCAGCAGC------------------------------------AGCAACA---------------------------------------------------------------------------------------------------------------------------------------ACA------GC----------------------------AA--------------------------CAGCAAC---AACAGCAACAGCAGCAGCAGCAGCAAGTTTTTGCTGTCAGCAGCATTAAAGTAAAAAGTGAAAACACATTAGCAGCAGTAACAGCAACAGTTG-CAA
droAna3	scaffold_13117:855786-856028 +		GTGCAGCAGCGGCA------------------------------------------------------------------GC------------------------A-------------------------------GCAACACCTGAAACAGCAACCGATC------------------------------TGACAAC-AAC--CA-CT-------------------------------GCAACAGCAAC------------------AGCA----------------------------------------------------------------ACAGCAACAGCAA-----CACCGGCAACTGTTGCAGCAACAGCAGCAG-CAAAA---------------------------------------------------------------------GAGCGCCAAACT-C-------------------------------------------------------------------------------CG-----------------------------------------------------ACTCCGCCAGCGACAAAAACCACAACAGC----------------------------------------------------------------------------------A---AGT------------------GCA---GAAGTTGCAGGTCCA-----------GCACCAGCAGC----------------------------AACA--ACTGCCA---------------CAGAGGCAGCAGCAACTAGTGCAGT---G-------------------------------------------------------------------GCAGCAA-CAT
droBip1	scf7180000396418:32689-32936 -		GG-CGGTGGT-------------------------------CCTGGAGGA------------------------------TAAGTTGGCTAATGAAAAGCAACAGCA-------------------------------ATTG---------------------------------------------------G---ATC-TGG--AA-TA-------------------------------CCACCACCAGC------------------AGCAGCAGCAGCAGCAGCCACATCATCA-TCA---GCAGCAGCAACAA---------------------------C-----AGCAAC---------------------C------------------------------ACCACAGCA--------------------GCCAACCA---------------AAGTGCCAA----------------------ACCTTGTCGTAG----CAACA---------------------------------------------------------------------------------------------------------GTGGC----ACCTC---------------AACAGCAGC----------------------------------------------------------------C---------TCCTGTTCCACA------------GCA------------G-----CAGCA------GA----------------------------AC--------------------------CAGCAGCCACCGCAGCAACACCAGC---A-------------------------------------------------------------------GCAGCAAACAT
droKik1	scf7180000302544:1464258-1464515 +		AT--AGTGGGAGCT------------------------------------------------------------GCA---GC------------------------G-------------------------------GTGGCCGGTGGAACGGCAAG--------------------------------CTCC---ACGC---TTCAA-CTGGCA-GCA-----GC------CCATCAGCAGCAGCAACAGCAACAACAGCAGCAGCAGCAAC------------------AACAT--C----------------------------------------------------AGCAAC---A------------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC------AGCAGTCGCC---------------GG----GCATTG-----------------------------------------------------TCAAGCCGTGCATGGATTTCTTATAAGATCAGC-------------------AGCAACT------------------CTT---GCAGC--------------------------AGCTGTTCC-------ACGTGGCG----CTCAA---TAACTCCGCGGCAG------------CAGCGGCGGCAGCAGCAGCGGCAGC---A-------------------------------------------------------------------GCTGCAG-CG-
droFic1	scf7180000454072:828419-828649 +		T-GCAGTTGCAGCA------------------------------------------------------------ACA---GC------------------------A-------------------------------ACAACAACAGCAACAGCAGCAACAC------------GTGCAGCAGCAA----------------------CA-------------------------------CCAACAGC------------------------AGCA----------------------ACA---------------------------------------TCAGC--------------------------AGCAGCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------C---AACAGCAGT--------TCCAGC------AGCAACATCTTCATCAGCAGCAACCGGATCAACTGCA---------------------------------GT---------------------------------------------T-------------------CCAGCA------------------------AC-----------------------------------AGCATCTCCAGCTTTATGCACACGCCC-CACTA---AA--GCAGCAACAG------------TTGCAGCAGCAGCAGCAGCAGCAGC---A-------------------------------------------------------------------GCAACAGCAGT
droEle1	scf7180000491080:1014314-1014565 -		CTGCAGCAGCAGC---------------------------------------------------------------------------------------------A-------------------------------GCAGCACATGCTGCAGCAGCAGCAC------------------------------CTGCAGC-AGC--AG-CT-------------------------------GCAACACCAGCAGCAACAGCATCAGCAGCAAC------------------AGCAG--C----------------------------------------------------AGCAGC---A------------GCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCA-----------------------------GCTGCAGCACCACCAACTCGCTCACCCCCACCAGCCGCCCACTCCGC--------------------------------------------------------GCCCCAGTTCGCCACCAACCACGGCG--CAGCA---GATC--------------------------------------------------------------C-------ACATCACGGCCACCCAACAC-----------CAGGCCGCC---------CAGCAGCAGCTGCACCAGCAGC---A-------------------------------------------------------------------ACAGCAG-CCC
droRho1	scf7180000763611:285648-285860 +		CTGGAGCAC---------------------------------ACGCT---------------------------TCA---GC------------------------A-------------------------------GCAACAGATGCAACAGCAGATGCAG------------------------------TTGCAAC-AGC--AA-CA-------------------------------GCAACACCAGC------------------AGCAGCAGCAACAGCAGACGCACCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGC------AGCAGCAGCAACACCAGCAGC------------------------------------AACATCACCAGCAACAGCAGCAGC-------------------------------------------------------------A---ACT------------------TAC---GCAGCAGCAGCTCCA-----------GCA------------------------------------------ACAGCAG---------------CAACACCTCCAGCAGCAGCAACACC---A-------------------------------------------------------------------ACAGCAG-CTC
droBia1	scf7180000302126:1332427-1332667 -		GC--AGCAGCAGCA------------------------GAACATGCT---------------------------------GA------------------------------GGTTGCAGACAGAGGCGCAGCCGCG-ACAGCAGATGCA-----------------------------------------------------------------------------------------------ACAACAGC------------------AGCAGCA----------------------GCAGCAGCA------------------------------GCAGCAGCAGCAG-----C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGC---AGCAACAG-----------------------------------TTGCAGC------------------------------------AGCAATTGCAGCAGCAGCAGCAGCAACCATCGCCCATGCTGG--------------GCAGA-------------------CCAGCAGCA---------------------G---------------CCGCAGCAGACATGC------A---------GCGATATGT---------------------GCAGAGG---------------ATGCAACAGCAGCAGCAGCAGCAAC---A-------------------------------------------------------------------ACAGCAG-CAG
droTak1	scf7180000415862:25540-25770 +		CTGAAGGTTCAGCA----------------------------------------------------------------------------------------------------------------------------GCAGCAGATATTGCAGAAGC---------------------------AACATCAACA-----------------------------------------------GCAGCA----------------------------------------------------ACATCAGC-----------------------------------------------------------------AACAACAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------C---AACAACAGACAACTGCCACTAGT------AACAACAACAACAATAATAACAATATGAACAACAAT---------------------------------------A-----------CGGCCATACATC--------------CAAAT-------------------CCAGCA---ATA------------------AAT---GCCA------------TAGTGA-AC------A---------GCATTATGAACTCTGCCAATCAGTAC--------------------------CAACAACAGCAGCAGCAGCAACAAC---A-------------------------------------------------------------------GCAGCAA-CAT
droEug1	scf7180000409182:440313-440546 +		GC--GGCAG------------------------------GACAGGCAGCA------------------------------GC------------------------A-------------------------------ACAGTTTAGAAGAGAGCAAAAGACT--------------------T---------GAGCATC-ATC--AA-CA-------------------------------ACAACAACAAC------------------AACAACAACAACAGCAACCACAACAG--C----------------------------------------------------ATCAGC---A------------GCA---------A-CAATA-------TACATC----AATACTACA--------------------CACGGCCT---------------TAATGTCA----------------------CAGCGTTCCATGCCA-------------------------------------------------------------------------------------------------------------------------------------------------GC-------------------------------------------------------------------AGCAACATCTGCCGCTGCAGCA------------TCA------------A-----CTGCG------GC----------------------------AA--------------------------CAGCAACAACGACAGCGACAACAGC---A-------------------------------------------------------------------GCAACAA-CAT
dm3	chr3R:11249856-11250102 -		CTGCAGCAGCAGC---------------------------------------------------------------------------------------------A-------------------------------ACAGCACATGCTGCAGCAGCACCAG------------------------------TTGCAGC-AAC--AG-CT-------------------------------GCAGCATCAGC----------------------------------------------------------------------------------------AGCAGCAGCAA-----C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACC---AACAGCAAT--------TGCAGC------AGCAGCAGCAACAGCACCACCAACTCGCTCATCCCCACCAGCCGCACACACCGC--------------------------------------------------------GCCCCAGTACGCCACCCACCACGGCG--CAGCA---GATC--------------------------------------------------------------C-------ACATCACGGCCACCCAGCAC-----------CAGGCCGCC---------CAGCAGCAGCTCCATCAGCAGC---A-------------------------------------------------------------------GCAGCAGCCGT
droSim2	2r:17663749-17663990 -		T-GCAGACGCGCCT---------------------GCAGCGCAAAAAGCAGGCCAACACCCATCACCAGCAGCAGCA---GC------------------------A---GCA-------------------------GCAGCAC---------CAACATCA------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAGCAACAACAGACCGCAGTGCAACAACAGCAGCAGCAGCAG-----C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGC---AACTGCATG--------TGCAGTCTGCACAATTGC--TG------------------------------------------------------GCGGCAGCAGCAGCAGC-------------------------------------------------------------A---A---CTGCC----CAGCAGCAA---------------CAGCAGCAT-----CAACA------AC----------------------------AC--------------------------CAGCAACAACAGCAGCAGCAGCAAC---A-------------------------------------------------------------------GCAGCAA-AAT
droSec2	scaffold_1:7906694-7906928 +		GC--AGCAGCAACA------------------------------------------------------------------GC------------------------AACTACTACAAC-------------------A----------------------------------------------------GTTC---ACGC---TGCAG-GCGGCG-GCA-----GC------ACAGCAACAGCAGCAGCAGCAACAACAGCACCAGCAACAAC------------------AGCAG--C----------------------------------------------------AGCAAC---A------------GCA---------AGCAACA-------AGTAGC----AATTCCTT--------------GGGCAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTACCAGTGGCTC--TCCGC---------------------------------------------------------------------------AACGGAGCCCAGCA---GTTT--------------------------------------------------------------T-------T-------GTCTCCCA--AC-----------CTGATCGCACAGCAA---CACCAGCAGCAGCAGCAACAAC---T-------------------------------------------------------------------GGAGCAA-CAT
droYak3	3R:15181464-15181705 +		GC--TGCAGCAGCA------------------------------------------------------------------GC------------------------A-------------------------------ACAGCACATGCTGCAGCAGCATCAG------------------------------CTGCAGC-AAC--AG-CT-------------------------------GCAACA-------------------------------------------------------------------------------------------GCAACAGCAGCAG-----C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACC---AACAGCAGT--------TGCAGC------AGCAGCAGCAACAGCACCACCAACTCGCTCATCCCCACCAGCCGCACACACCGC--------------------------------------------------------GCCCCAGTACGCCACCCACCACGGCG--CAGCA---GATC--------------------------------------------------------------C-------ACATCACGGCCACCCAGCAC-----------CAGGCCGCC---------C---AGCAGCAGCTCCACCAGC---A-------------------------------------------------------------------GCAGCAGCCGT
droEre2	scaffold_4690:3079951-3080209 +		ATGCTGCTGGTGAA---G---TCGCACTACGTGCCGCCGGCC---AAGCATGCCACCG---AGCAC--------GCGACCAC------------------------A-------------------------------ACAACACGGGCGACAACAACGTCCA------------------------------GTACGAC-AAC--AG-CA-------------------------------GCAGCAGCAGC------------------AGCAGCAGCAACAGCAGCA----------ACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAG-----------CAGC------ACCAGCAACAACACACGCAGC------------------------------------AGCAACATCGGCCAAAGTGGAA--------------------------------GTGCA-G-------------------CCATCA------------------------ACAGTCACGTCA--------------------------------------TCGA-------------------AG--GGACTGA---------------CAGCAGCAGCATCAGCAGCAGCAGC---A-------------------------------------------------------------------GCAGCAA-CGG

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droGri2

ATGCTGGTGCAGAT---G---CT------------GCAGGACATAATGCA-AC-----------------------------G---------------------------------AA-------------------A----------------------------------------------------TTTC---ACAT---TGAAT-GCAGC----------GCAAATAAACATCAACAACAACAACAATAACAACAACAGCAGCAGCA----------------------------------GCAGCCGCAGCAG--------------------------------------C---A------------GCA------------------------------AACATTTGAAGA--------------------GCCATAAAACTGGCCGAGCCTCAGCGCCCCAAGCC-CCAACCATGCCCATGCTCAACATTACATGCCAGGCAACATTAGAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AA--------------------------CTGCAACAGCAGCAGCAGCAGCAGC---A-------------------------------------------------------------------GCAGTGA-CGT	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
...................................................................................................................................................................................................................................................................AACAGCAGCAGCA----------------------------------GCAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	20	0.10	2	2	0
........................................................................................................................................................................................................................................................................CAGCAGCA----------------------------------GCAGCCGCAGCAG--------------------------------------C---A------------..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	1	0

droVir3

CTGCTGCTGCAGTTGCAG---TTGCATT---TGCTGCAGGACATAAAACA-AC-----------------------------G---------------------------------AA-------------------A----------------------------------------------------TTTC---ACAT---TGAAT-GCGACG-CCGCAAACGCAAATAAACATC---------AGCAGC------------------AGCA-------------------------AAAGC------------AA--------------------------------------C---A------------GCA------------------------------AACATTTGAAGATGCCCCGCACCATGGACAGAGCCATAAAACTGGCCGAGCCTCA--------AGCCCCCAACCATGCCCATGCCCAAC-----ATGCCAGGCAACATTAGAAAACTGCAACAGCAGCAGCAGCAGCAGC---AGCCGCAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CG--------------------------CAGTCGCAGCCAAAGCAGCGGCAGC---G-------------------------------------------------------------------GCAGCGA-CAG	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.......................................................................................................................................................................................................................................................AGCAGC------------------AGCA-------------------------AAAGC------------AA--------------------------------------C---A------------GCA------------------------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	5	0.20	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGC---AGCCGCAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.......................................................................................................................................	21	12	0.08	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

ATGCTGCAG------------------------------GACATAAAACAAAC-----------------------------G---------------------------------AA-------------------A----------------------------------------------------TTTC---ACAT---TGAAT-GCAGCGCGCC-----GCAAATAAACATCATCAGCAGCAACAAAAACAACAACAACAACAACA----------------------------------ACAGCCGCAGCAG--------------------------------------C-------------GCAGCAGCAGCAACAG-CAGGGAGTCGCGTGCAGCAAACATTTGAAGATGCCCCGCACTCTGGACAGGGCCATAAAACTGGCTGAGCCTCA--------AGCCTCCAACCATGCCCATGCCCAAC-----ATGCCAGGCAACATTAGAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----CTGCA------AC----------------------------AG--------------------------CAGCAGCCGTAGAGGCAACGGCAGC---G-------------------------------------------------------------------GCAGCGG-AGG	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
........................................................................................................................................................................................................................................AACATCATCAGCAGCAACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	4	0.25	1	0	0	0	0	0	1
..........................................................................................................................................................................................................................................................................ACAACA----------------------------------ACAGCCGCAGCAG--------------------------------------C-------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	13	0.08	1	0	0	0	0	1	0
................................................................................................................................................................................................................................................................AACAACAACAACAACA----------------------------------ACAGCCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	14	0.07	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................CAACAACAACAACA----------------------------------ACAGCCGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	19	0.05	1	0	0	0	0	1	0

droWil2

TGGCGA-TGGCAAT---G---CT------------GCAGCATCAGCAACA------------------ACA---ACA---GC------------------------A-------------------------------GCAACGAACGCAACAGCAACAGCAACAGCAGCAACAATTGCAGCAACAA----------------------CA-------------------------------GCAACAGC------------------------A-------------------------GCA--------------------------------------------------------------ACAATGGCAGCAACAACAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGC---AACAACAA-----------CTGC------AGCAGCAACAACAACAGCAGC------------------------------------AACAACAACAGCAGC----------------------------------------------------------------------AGCAACA------------------AC------------------A-----------GCATCAGCAAC----------------------------AGCA--ACAGCAG---------------CAACGAATGCAACAGCAACAGCAAC---A-------------------------------------------------------------------GCAACAG-CAA	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
..............................................................................................................................................................................................................................................................................................................A--------------------------------------------------------------ACAATGGCAGCAACAACAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------AG......................................................................................................................................................................................................................................................................................................................................................................................................................	23	20	0.70	14	0	14	0	0	0
.....................................AGCATCAGCAACA------------------ACA---ACA---GC------------------------A-------------------------------GC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	4	0.25	1	0	0	0	1	0
......................................................................................................................................................................................AACAA----------------------CA-------------------------------GCAACAGC------------------------A-------------------------GCA--------------------------------------------------------------ACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	20	0.25	5	0	5	0	0	0
....................................CAGCATCAGCAACA------------------ACA---ACA---GC------------------------A-------------------------------GC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	4	0.25	1	0	0	0	1	0
........................................................................................................................................................................................................................................................................................................................................................................................AACAACAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGC---AACAACAA-----------CTG............................................................................................................................................................................................................................................................................................................................................................................................	23	20	0.20	4	0	4	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAACAACAGCA..................................................................................................................................................................................................................................................................................................................................................................	19	20	0.20	4	0	0	0	4	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAGC------------------------------------AACAACA.....................................................................................................................................................................................................................................................................................................................	18	20	0.15	3	0	0	0	3	0
...................................................................................................................................................................................AGCAACAA----------------------CA-------------------------------GCAACAGC------------------------A-------------------------GC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.15	3	0	2	0	1	0
..........................................................................................................................................................................AACAATTGCAGCAACAA----------------------CA-------------------------------GCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	20	0.15	3	0	1	0	2	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCAGC------------------------------------AAC.........................................................................................................................................................................................................................................................................................................................	19	20	0.15	3	0	0	0	3	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAGCAAC---A-------------------------------------------------------------------GCAACA.....	22	20	0.15	3	0	0	0	3	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCAGC------------------------------------AACA........................................................................................................................................................................................................................................................................................................................	20	20	0.15	3	0	0	0	3	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACAGCAAC---A-------------------------------------------------------------------GCAACA.....	21	20	0.15	3	0	0	0	3	0
..............................................................................................................................................................................................................................................................................................................A--------------------------------------------------------------ACAATGGCAGCAACAACAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGC---..................................................................................................................................................................................................................................................................................................................................................................................................................	24	20	0.15	3	0	2	0	1	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACGAATGCAACAGCAACAGCAAC---...............................................................................	25	8	0.13	1	0	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAAC----------------------------AGCA--ACAGCAG---------------CAACGAA....................................................................................................	26	9	0.11	1	0	0	0	1	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------------------AACAACAACAGCAGC----------------------------------------------------------------------AGCAAC.................................................................................................................................................................................................................................	22	20	0.10	2	0	0	0	2	0
.........................................................................................................................................................................................AA----------------------CA-------------------------------GCAACAGC------------------------A-------------------------GCA--------------------------------------------------------------ACAATGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	20	0.10	2	0	2	0	0	0
.........................................................................................................................................................................................AA----------------------CA-------------------------------GCAACAGC------------------------A-------------------------GCA--------------------------------------------------------------ACAATGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	20	0.10	2	0	2	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGC---AACAACAA-----------CTG............................................................................................................................................................................................................................................................................................................................................................................................	26	20	0.10	2	0	2	0	0	0
......................................................................................................................................................................................AACAA----------------------CA-------------------------------GCAACAGC------------------------A-------------------------GCA--------------------------------------------------------------AC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.10	2	0	0	0	2	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAAC----------------------------AGCA--ACAGCAG---------------CAACG......................................................................................................	22	11	0.09	1	0	0	0	1	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------AC------------------A-----------GCATCAGCAAC----------------------------AGCA--ACAGCAG---------------...........................................................................................................	27	12	0.08	1	0	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGC----------------------------------------------------------------------AGCAACA------------------AC------------------A-----------GCATCAG.......................................................................................................................................................................	27	12	0.08	1	0	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA------------------AC------------------A-----------GCATCAGCAAC----------------------------AGCA--ACAG.............................................................................................................................	27	12	0.08	1	0	1	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA------------------AC------------------A-----------GCATCAGCAAC----------------------------AGC....................................................................................................................................	22	14	0.07	1	0	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGC------AGCAGCAACAACAACAGCAGC------------------------------------AACA........................................................................................................................................................................................................................................................................................................................	28	14	0.07	1	0	0	0	1	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA-----------CTGC------AGCAGCAACAACAACA.....................................................................................................................................................................................................................................................................................................................................................................	25	15	0.07	1	0	1	0	0	0
........................................................................................................................................................AGCAACAGCAACAGCAGCAACAATT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	16	0.06	1	0	0	0	1	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------------------AC------------------A-----------GCATCAGCAAC----------------------------AGC....................................................................................................................................	19	17	0.06	1	0	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------GCATCAGCAAC----------------------------AGCA--ACAGCAG---------------...........................................................................................................	23	17	0.06	1	0	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAAC----------------------------AGCA--ACAGCAG---------------CAAC.......................................................................................................	24	19	0.05	1	0	1	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC------------------------------------AACAACAACAGCAGC----------------------------------------------------------------------AGCAA..................................................................................................................................................................................................................................	26	20	0.05	1	0	1	0	0	0
..........................................................................................................................................................................AACAATTGCAGCAACAA----------------------CA-------------------------------GC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---AACAACAA-----------CTGC------AGCAGCAA.............................................................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	1	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................TGGCAGCAACAACAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGC---AACAA.............................................................................................................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................................................................................CAACAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGC---AACAACAA-----------CTGC------AGC..................................................................................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	1	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC------------------------------------AACAACAACAGCAGC----------------------------------------------------------------------AGCAACA------------------..............................................................................................................................................................................................................	25	20	0.05	1	0	0	0	1	0
...............................................................................................................................................................................................................................................................................................................................................................................AATGGCAGCAACAACAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGC---A.................................................................................................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0
..........................................................................................................................................................................AACAATTGCAGCAACAA----------------------CA-------------------------------GCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	1	0	0	0
.................................................................................................................................................................................GCAGCAACAA----------------------CA-------------------------------GCAACAGC------------------------A-------------------------G...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAGC----------------------------------------------------------------------AGCAACA------------------AC------------------A-----------G.............................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAACAGCAGC------------------------------------AACAA.......................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	0	0	1	0
..............................................................................................................................................................AGCAACAGCAGCAACAATTG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGC------------------------------------AACAACAACAGCAG..............................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................CAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGC---AACAACAA-----------CTGC------AG...................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0
..........................................................................................................................................................................AACAATTGCAGCAACAA----------------------CA-------------------------------GCAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0
......................................................................................................................................................ACAGCAACAGCAACAGCAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	1	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAGC----------------------------------------------------------------------AGCAACA------------------AC------------------A-----------..............................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0
.......................................................................................................................................................................................ACAA----------------------CA-------------------------------GCAACAGC------------------------A-------------------------GCA--------------------------------------------------------------ACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	1
...........................................................................................................................................................................................................................................................................................................................................................................................AACAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGC---AACAACAA-----------CTGC------AG...................................................................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAGC------------------------------------AACAACAAC...................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAGCAGC----------------------------------------------------------------------AGCAA..................................................................................................................................................................................................................................	20	20	0.05	1	0	0	1	0	0
.............................................................................................................................................................................AATTGCAGCAACAA----------------------CA-------------------------------GCAACAGC------------------------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC------------------------------------AACAACAACAGCAGC----------------------------------------------------------------------AGCA...................................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................................................GGCAGCAACAACAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGC---AAC...............................................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................AC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGC---AACAACAA-----------CTGC------AGCA.................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................TGGCAGCAACAACAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGC---AACAACAA-----------C..............................................................................................................................................................................................................................................................................................................................................................................................	28	20	0.05	1	0	1	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................AATGGCAGCAACAACAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGC---AACA..............................................................................................................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	1	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................GGCAGCAACAACAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGC---AACAA.............................................................................................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	1	0	0	0
.............................................................................................................................................................................................................................................................................................................CA--------------------------------------------------------------ACAATGGCAGCAACAACAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGC---..................................................................................................................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	1	0	0	0
...............................................................................................................................................................................TTGCAGCAACAA----------------------CA-------------------------------GCAACAGC------------------------A-------------------------GC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	1	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAGCAGC------------------------------------AACAA.......................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	0	0	1	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAA-----------CTGC------AGCAGCAACA...........................................................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0
.................................................................................................................................................................................GCAGCAACAA----------------------CA-------------------------------GCAACAGC------------------------A-------------------------GCA--------------------------------------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	1	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCAGC------------------------------------AACAACAACA..................................................................................................................................................................................................................................................................................................................	26	20	0.05	1	0	0	0	1	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAGCAAC---A-------------------------------------------------------------------GCAAC......	22	20	0.05	1	0	0	0	0	1
.............................................................................................................................................................................................................................................................................................................CA--------------------------------------------------------------ACAATGGCAGCAACAACAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------AG......................................................................................................................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	1	0
...............................................................................................................................................................................TTGCAGCAACAA----------------------CA-------------------------------GCAACAGC------------------------A-------------------------G...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	1	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------------------------------------AACAACAACAGCAGC----------------------------------------------------------------------AGCAACA------------------..............................................................................................................................................................................................................	24	20	0.05	1	0	0	0	1	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAGCAGC------------------------------------AACAACAACAG.................................................................................................................................................................................................................................................................................................................	26	20	0.05	1	0	0	0	1	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------------------------------------AACAACAACAGCAGC----------------------------------------------------------------------AGCA...................................................................................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0
.......................................................................................................................................................................................................................................................AGC------------------------A-------------------------GCA--------------------------------------------------------------ACAATGGCAGCAACAACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................ACAATGGCAGCAACAACAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGC---A.................................................................................................................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0
...................................................................................................................................................................................AGCAACAA----------------------CA-------------------------------GCAACAGC------------------------A-------------------------GCA--------------------------------------------------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0
................................................................................................................................................................................TGCAGCAACAA----------------------CA-------------------------------GCAACAGC------------------------A-------------------------GC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0
........................................................................................................................................................................................CAA----------------------CA-------------------------------GCAACAGC------------------------A-------------------------GCA--------------------------------------------------------------ACAATGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAAC----------------------------AGCA--ACAGCAG---------------C..........................................................................................................	21	20	0.05	1	0	1	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................AAC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGC---AACAACAA-----------CTGC------AGCAGC...............................................................................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	0	1	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAACAGCAACAGCAAC---A-------------------------------------------------------------------GC.........	21	20	0.05	1	0	1	0	0	0
..................................................................................................................................................................................................................A-------------------------------GCAACAGC------------------------A-------------------------GCA--------------------------------------------------------------ACAATGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	1	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------------------------AACAACAACAGCAGC----------------------------------------------------------------------AGCAACA------------------..............................................................................................................................................................................................................	23	20	0.05	1	0	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................................AAC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGC---AACAACAA-----------CTGC------AGCAGCAAC............................................................................................................................................................................................................................................................................................................................................................................	27	20	0.05	1	0	1	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGC------------------------------------AACAACAACAGCA...............................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	0	0	0	1
.......................................................................................................................................................................................ACAA----------------------CA-------------------------------GCAACAGC------------------------A-------------------------GCA--------------------------------------------------------------ACAATGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................AACAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGC---AACAACAA-----------CTGC------AGCA.................................................................................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	0	0	1	0
.....................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGC---AACAACAA-----------CTGC------AG...................................................................................................................................................................................................................................................................................................................................................................................	29	20	0.05	1	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---AACAACAA-----------CTGC------AGCAGCAACA...........................................................................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	0	0	1	0
..............................................................................................................................................................................................................................................................................................................A--------------------------------------------------------------ACAATGGCAGCAACAACAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGC---A.................................................................................................................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	0	0	1	0
......................................................................................................................................................................................AACAA----------------------CA-------------------------------GCAACAGC------------------------A-------------------------GCA--------------------------------------------------------------ACAATGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	20	0.05	1	0	1	0	0	0
.........................................................................................................................................................................CAACAATTGCAGCAACAA----------------------CA-------------------------------GCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGC----------------------------------------------------------------------AGCAACA------------------AC------------------A-----------GCA...........................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................ACAATGGCAGCAACAACAAC---------------------------------------------------------------------------------------------------------------------------------------------------------------AG......................................................................................................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAGC------------------------------------AACAACAACA..................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	0	0	0	1

dp5

AAGCCCGTGCCTCA---GTTGGC------------GGAGACCATGAAGCGACCCATCCACCAGCAGCAGCAACATCA---GC------------------------T----------------------------------------GCAGCAGCAGCAACAA------------------------------CAGCAGC-AACATCAACT-------------------------------GCAGCAGC------------------------A-------------------------GCA---TCA------------------------------GCAGCAGCAGCAG-----C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAC---TGCAGCAGA--------AGCAGC------AACAGCAACAACAGCAGCAGCAACATAAACATCAAC----------------------------------------------------------------------------------------------------------AGCAACA------------------ACA---GCAG--------------------C------A---------GCAACAT-------------------AA--ACATCAG---------------CAGCAACAGCAGCAGCAGCAACAAC---A-------------------------------------------------------------------GCAGCAG-CAA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
..........................................................................TCA---GC------------------------T----------------------------------------GCAGCAGCAGCAACAA------------------------------CAGCAGC-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	0	0	1	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------------CAGCAACAGCAGCAGCAGC........................................................................................	20	20	0.50	10	0	10	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAAC----------------------------------------------------------------------------------------------------------AGCAACA------------------ACA---GCAG--------------------C------A---------G..............................................................................................................................................................	23	4	0.25	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................C------------------------A-------------------------GCA---TCA------------------------------GCAGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	20	0.15	3	0	2	0	0	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................C------------------------A-------------------------GCA---TCA------------------------------GCAGCAGCAGCAG-----...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.15	3	0	0	0	0	1	0	0	2	0	0
........................................................................................................................................................AGCAGCAACAA------------------------------CAGCAGC-A..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	20	0.15	3	0	3	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................CAGCAGC------------------------A-------------------------GCA---TCA------------------------------GCAGCAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.10	2	0	2	0	0	0	0	0	0	0	0
.........................................................................................................................................................GCAGCAACAA------------------------------CAGCAGC-AAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	20	0.10	2	0	2	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAGCAACAAC---A-------------------------------------------------------------------GCAGCA.....	28	14	0.07	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAG---------------CAGCAACAGCAGCAGCAGC........................................................................................	24	14	0.07	1	0	0	0	0	1	0	0	0	0	0
...................................................................................................................................................................................................................................................CAGCAGC------------------------A-------------------------GCA---TCA------------------------------GCAGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	20	0.05	1	0	0	1	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................GCA---TCA------------------------------GCAGCAGCAGCAG-----C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------........................................................................................................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	0	0	0	1	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAAC---A-------------------------------------------------------------------GCAGCA.....	21	20	0.05	1	0	0	1	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAACAAC---A-------------------------------------------------------------------GCA........	19	20	0.05	1	0	0	0	0	1	0	0	0	0	0
....................................................................................................................................................................................................................................................AGCAGC------------------------A-------------------------GCA---TCA------------------------------GCAGCAGCAGCAG-----...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACA------------------ACA---GCAG--------------------C------A---------GCAA...........................................................................................................................................................	20	20	0.05	1	0	0	0	0	1	0	0	0	0	0
...................................................................................................................................................GCAGCAGCAGCAACAA------------------------------CAGCAGC-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................CAGCAGCAGCAACAA------------------------------CAGCAGC-...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	0	1	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAACAAC---A-------------------------------------------------------------------GCAGCA.....	25	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................CAGCAGCAACAA------------------------------CAGCAGC-AACA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACAACAGCAGCAGCA...............................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAAC---A-------------------------------------------------------------------GCAGCAG-CAA	20	20	0.05	1	0	0	0	0	1	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAACAAC---A-------------------------------------------------------------------GCAG.......	24	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................CAGCAGC------------------------A-------------------------GCA---TCA------------------------------GCAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	0	0	0	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAACAAC---A-------------------------------------------------------------------GCAG.......	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG---------------CAGCAACAGCAGCAGCA..........................................................................................	20	20	0.05	1	0	0	0	0	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG---------------CAGCAACAGCAGCAGCAGCA.......................................................................................	23	20	0.05	1	0	0	0	1	0	0	0	0	0	0
........................................................................................................................................................................................................................................................GC------------------------A-------------------------GCA---TCA------------------------------GCAGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................A------------------------------GCAGCAGCAGCAG-----C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAC---TG................................................................................................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................C------------------------A-------------------------GCA---TCA------------------------------GCAGCAGCAGCAG-----C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------........................................................................................................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	0	1	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC------AACAGCAACAACAGCAGCA..................................................................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAACAAC---A-------------------------------------------------------------------GCAGC......	22	20	0.05	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------AACAGCAACAACAGCAGCA..................................................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	0	0	0	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------AACAGCAACAACAGCAGCAGC................................................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	0	0	0	0	0	1	0	0	0
.......................................................................................................................................................................................................................................................AGC------------------------A-------------------------GCA---TCA------------------------------GCAGCAGCAGCAG-----...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	20	0.05	1	0	1	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAG---------------CAGCAACAGCAGC..............................................................................................	19	20	0.05	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC------AACAGCAACAACAGCAGC...................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	1	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAACAAC---A-------------------------------------------------------------------GCAGCAG-CA.	29	20	0.05	1	0	0	0	1	0	0	0	0	0	0
......................................................................................................................................................................................................................................................CAGC------------------------A-------------------------GCA---TCA------------------------------GCAGCAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	0	0	0	0	1	0	0	0	0

droPer2

GC--AGAAGCAGCA------------------------------------------------------------GCA---GC------------------------A---ACA-------------------------GCAGCAGAAACAGCAGCAGCAGCAA------------------------------CAG-------------CA-------------------------------GCAACAACAGC------------AAC------AGCAGCA-------------------ACA------------------------------------------GCAGCAA-----C------------------AGCAACAGC---------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAACAGCAACA-----------------------------------GCAGCAGC------------------------------------AGCAACA---------------------------------------------------------------------------------------------------------------------------------------ACA------GC----------------------------AA--------------------------CAGCAAC---AACAGCAACAGCAGCAGCAGCAGCAAGTTTTTGCTGTCAGCAGCATTAAAGTAAAAAGTGAAAACACATTAGCAGCAGTAACAGCAACAGTTG-CAA	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---AACAGCAACAGCAGCAGCAGCA...........................................................................	25	15	0.07	1	0	0	1	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---AACAGCAACAGCAGCAGCAGCA...........................................................................	24	19	0.05	1	0	1	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---AACAGCAACAGCAGCAGCAG.............................................................................	21	20	0.05	1	0	0	1	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC---AACAGCAACAGCAGCAGC...............................................................................	21	20	0.05	1	0	0	1	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACA-----------------------------------GCAGCAGC------------------------------------AGCAACA---------------------------------------------------------------------------------------------------------------------------------------..............................................................................................................................................................................	21	20	0.05	1	0	0	1	0	0	0

droAna3

GTGCAGCAGCGGCA------------------------------------------------------------------GC------------------------A-------------------------------GCAACACCTGAAACAGCAACCGATC------------------------------TGACAAC-AAC--CA-CT-------------------------------GCAACAGCAAC------------------AGCA----------------------------------------------------------------ACAGCAACAGCAA-----CACCGGCAACTGTTGCAGCAACAGCAGCAG-CAAAA---------------------------------------------------------------------GAGCGCCAAACT-C-------------------------------------------------------------------------------CG-----------------------------------------------------ACTCCGCCAGCGACAAAAACCACAACAGC----------------------------------------------------------------------------------A---AGT------------------GCA---GAAGTTGCAGGTCCA-----------GCACCAGCAGC----------------------------AACA--ACTGCCA---------------CAGAGGCAGCAGCAACTAGTGCAGT---G-------------------------------------------------------------------GCAGCAA-CAT	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCCAAACT-C-------------------------------------------------------------------------------CG-----------------------------------------------------ACTCCGCCAGC...........................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
....................................................................................................................................................................................................................................................AACAGCAAC------------------AGCA----------------------------------------------------------------ACAGCAACAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................................................CA----------------------------------------------------------------ACAGCAACAGCAA-----CACC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	1	0	0	0	0
...................................................................................................................................................................................................................................................CAACAGCAAC------------------AGCA----------------------------------------------------------------ACAGCAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	1	0	0	0	0

droBip1

GG-CGGTGGT-------------------------------CCTGGAGGA------------------------------TAAGTTGGCTAATGAAAAGCAACAGCA-------------------------------ATTG---------------------------------------------------G---ATC-TGG--AA-TA-------------------------------CCACCACCAGC------------------AGCAGCAGCAGCAGCAGCCACATCATCA-TCA---GCAGCAGCAACAA---------------------------C-----AGCAAC---------------------C------------------------------ACCACAGCA--------------------GCCAACCA---------------AAGTGCCAA----------------------ACCTTGTCGTAG----CAACA---------------------------------------------------------------------------------------------------------GTGGC----ACCTC---------------AACAGCAGC----------------------------------------------------------------C---------TCCTGTTCCACA------------GCA------------G-----CAGCA------GA----------------------------AC--------------------------CAGCAGCCACCGCAGCAACACCAGC---A-------------------------------------------------------------------GCAGCAAACAT	Size	Hit Count	Total Norm	Total
No Reads

droKik1

AT--AGTGGGAGCT------------------------------------------------------------GCA---GC------------------------G-------------------------------GTGGCCGGTGGAACGGCAAG--------------------------------CTCC---ACGC---TTCAA-CTGGCA-GCA-----GC------CCATCAGCAGCAGCAACAGCAACAACAGCAGCAGCAGCAAC------------------AACAT--C----------------------------------------------------AGCAAC---A------------GCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AC------AGCAGTCGCC---------------GG----GCATTG-----------------------------------------------------TCAAGCCGTGCATGGATTTCTTATAAGATCAGC-------------------AGCAACT------------------CTT---GCAGC--------------------------AGCTGTTCC-------ACGTGGCG----CTCAA---TAACTCCGCGGCAG------------CAGCGGCGGCAGCAGCAGCGGCAGC---A-------------------------------------------------------------------GCTGCAG-CG-	Size	Hit Count	Total Norm	Total
No Reads

droFic1

T-GCAGTTGCAGCA------------------------------------------------------------ACA---GC------------------------A-------------------------------ACAACAACAGCAACAGCAGCAACAC------------GTGCAGCAGCAA----------------------CA-------------------------------CCAACAGC------------------------AGCA----------------------ACA---------------------------------------TCAGC--------------------------AGCAGCAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------C---AACAGCAGT--------TCCAGC------AGCAACATCTTCATCAGCAGCAACCGGATCAACTGCA---------------------------------GT---------------------------------------------T-------------------CCAGCA------------------------AC-----------------------------------AGCATCTCCAGCTTTATGCACACGCCC-CACTA---AA--GCAGCAACAG------------TTGCAGCAGCAGCAGCAGCAGCAGC---A-------------------------------------------------------------------GCAACAGCAGT	Size	Hit Count	Total Norm	Total
No Reads

droEle1

CTGCAGCAGCAGC---------------------------------------------------------------------------------------------A-------------------------------GCAGCACATGCTGCAGCAGCAGCAC------------------------------CTGCAGC-AGC--AG-CT-------------------------------GCAACACCAGCAGCAACAGCATCAGCAGCAAC------------------AGCAG--C----------------------------------------------------AGCAGC---A------------GCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCA-----------------------------GCTGCAGCACCACCAACTCGCTCACCCCCACCAGCCGCCCACTCCGC--------------------------------------------------------GCCCCAGTTCGCCACCAACCACGGCG--CAGCA---GATC--------------------------------------------------------------C-------ACATCACGGCCACCCAACAC-----------CAGGCCGCC---------CAGCAGCAGCTGCACCAGCAGC---A-------------------------------------------------------------------ACAGCAG-CCC	Size	Hit Count	Total Norm	Total
No Reads

droRho1

CTGGAGCAC---------------------------------ACGCT---------------------------TCA---GC------------------------A-------------------------------GCAACAGATGCAACAGCAGATGCAG------------------------------TTGCAAC-AGC--AA-CA-------------------------------GCAACACCAGC------------------AGCAGCAGCAACAGCAGACGCACCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGC------AGCAGCAGCAACACCAGCAGC------------------------------------AACATCACCAGCAACAGCAGCAGC-------------------------------------------------------------A---ACT------------------TAC---GCAGCAGCAGCTCCA-----------GCA------------------------------------------ACAGCAG---------------CAACACCTCCAGCAGCAGCAACACC---A-------------------------------------------------------------------ACAGCAG-CTC	Size	Hit Count	Total Norm	Total
No Reads

droBia1

GC--AGCAGCAGCA------------------------GAACATGCT---------------------------------GA------------------------------GGTTGCAGACAGAGGCGCAGCCGCG-ACAGCAGATGCA-----------------------------------------------------------------------------------------------ACAACAGC------------------AGCAGCA----------------------GCAGCAGCA------------------------------GCAGCAGCAGCAG-----C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGC---AGCAACAG-----------------------------------TTGCAGC------------------------------------AGCAATTGCAGCAGCAGCAGCAGCAACCATCGCCCATGCTGG--------------GCAGA-------------------CCAGCAGCA---------------------G---------------CCGCAGCAGACATGC------A---------GCGATATGT---------------------GCAGAGG---------------ATGCAACAGCAGCAGCAGCAGCAAC---A-------------------------------------------------------------------ACAGCAG-CAG	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CTGAAGGTTCAGCA----------------------------------------------------------------------------------------------------------------------------GCAGCAGATATTGCAGAAGC---------------------------AACATCAACA-----------------------------------------------GCAGCA----------------------------------------------------ACATCAGC-----------------------------------------------------------------AACAACAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------C---AACAACAGACAACTGCCACTAGT------AACAACAACAACAATAATAACAATATGAACAACAAT---------------------------------------A-----------CGGCCATACATC--------------CAAAT-------------------CCAGCA---ATA------------------AAT---GCCA------------TAGTGA-AC------A---------GCATTATGAACTCTGCCAATCAGTAC--------------------------CAACAACAGCAGCAGCAGCAACAAC---A-------------------------------------------------------------------GCAGCAA-CAT	Size	Hit Count	Total Norm	Total
No Reads

droEug1

GC--GGCAG------------------------------GACAGGCAGCA------------------------------GC------------------------A-------------------------------ACAGTTTAGAAGAGAGCAAAAGACT--------------------T---------GAGCATC-ATC--AA-CA-------------------------------ACAACAACAAC------------------AACAACAACAACAGCAACCACAACAG--C----------------------------------------------------ATCAGC---A------------GCA---------A-CAATA-------TACATC----AATACTACA--------------------CACGGCCT---------------TAATGTCA----------------------CAGCGTTCCATGCCA-------------------------------------------------------------------------------------------------------------------------------------------------GC-------------------------------------------------------------------AGCAACATCTGCCGCTGCAGCA------------TCA------------A-----CTGCG------GC----------------------------AA--------------------------CAGCAACAACGACAGCGACAACAGC---A-------------------------------------------------------------------GCAACAA-CAT	Size	Hit Count	Total Norm	Total
No Reads

dm3

CTGCAGCAGCAGC---------------------------------------------------------------------------------------------A-------------------------------ACAGCACATGCTGCAGCAGCACCAG------------------------------TTGCAGC-AAC--AG-CT-------------------------------GCAGCATCAGC----------------------------------------------------------------------------------------AGCAGCAGCAA-----C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACC---AACAGCAAT--------TGCAGC------AGCAGCAGCAACAGCACCACCAACTCGCTCATCCCCACCAGCCGCACACACCGC--------------------------------------------------------GCCCCAGTACGCCACCCACCACGGCG--CAGCA---GATC--------------------------------------------------------------C-------ACATCACGGCCACCCAGCAC-----------CAGGCCGCC---------CAGCAGCAGCTCCATCAGCAGC---A-------------------------------------------------------------------GCAGCAGCCGT	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------CAGCAGCAGCTCCATCAGCAGC---A-------------------------------------------------------------------G..........	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCACGGCG--CAGCA---GATC--------------------------------------------------------------C-------ACATCAC..................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAAT--------TGCAGC------AGCAGCAG.............................................................................................................................................................................................................................................................................................................................................................................	21	2	1.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC--------------------------------------------------------GCCCCAGTACGCCACCC......................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCTCCATCAGCAGC---...............................................................................	20	3	0.67	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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..................................................................................................................................................................................................................................................GCAGCATCAGC----------------------------------------------------------------------------------------AGCAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	20	0.10	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATCAGCAGC---A-------------------------------------------------------------------GCAGCAGC...	20	17	0.06	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------TGCAGC------AGCAGCAGCAACC........................................................................................................................................................................................................................................................................................................................................................................	20	19	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................GCAGCATCAGC----------------------------------------------------------------------------------------AGCAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................CAGCAGCAA-----C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACC---AACAGC............................................................................................................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAGCAGC---A-------------------------------------------------------------------GCAGCAGCCT.	21	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC------AGCAGCAGCAACAGC......................................................................................................................................................................................................................................................................................................................................................................	18	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................CAGCATCAGC----------------------------------------------------------------------------------------AGCAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

T-GCAGACGCGCCT---------------------GCAGCGCAAAAAGCAGGCCAACACCCATCACCAGCAGCAGCA---GC------------------------A---GCA-------------------------GCAGCAC---------CAACATCA------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAGCAACAACAGACCGCAGTGCAACAACAGCAGCAGCAGCAG-----C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGC---AACTGCATG--------TGCAGTCTGCACAATTGC--TG------------------------------------------------------GCGGCAGCAGCAGCAGC-------------------------------------------------------------A---A---CTGCC----CAGCAGCAA---------------CAGCAGCAT-----CAACA------AC----------------------------AC--------------------------CAGCAACAACAGCAGCAGCAGCAAC---A-------------------------------------------------------------------GCAGCAA-AAT	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGGCAGCAGCAGCAGC-------------------------------------------------------------A---A---...............................................................................................................................................................................................................................	19	15	1.07	16	0	0	0	0	16	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................ACATCA------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAGCAACAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	5	0.80	4	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................GCAACAACAGCAGCAGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAAC---A-------------------------------------------------------------------GC.........	16	20	0.05	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAG-----C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGC---AACTG.............................................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAGCAGCAGCAG......................................................................................	19	20	0.05	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0

droSec2

GC--AGCAGCAACA------------------------------------------------------------------GC------------------------AACTACTACAAC-------------------A----------------------------------------------------GTTC---ACGC---TGCAG-GCGGCG-GCA-----GC------ACAGCAACAGCAGCAGCAGCAACAACAGCACCAGCAACAAC------------------AGCAG--C----------------------------------------------------AGCAAC---A------------GCA---------AGCAACA-------AGTAGC----AATTCCTT--------------GGGCAAG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACATTACCAGTGGCTC--TCCGC---------------------------------------------------------------------------AACGGAGCCCAGCA---GTTT--------------------------------------------------------------T-------T-------GTCTCCCA--AC-----------CTGATCGCACAGCAA---CACCAGCAGCAGCAGCAACAAC---T-------------------------------------------------------------------GGAGCAA-CAT	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
...........................................................................................................................................................................................................................................AGCAACAGCAGCAGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	20	0.15	3	0	0	0	3
.................................................................................................................................................................................................................................................AGCAGCAGCAGCAACAACAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	20	0.05	1	0	0	1	0
....................................................................................................................................................................................................................................................AGCAGCAGCAACAACAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	0	1	0
..............................................................................................................................................................................................................................................................................CAAC------------------AGCAG--C----------------------------------------------------AGCAAC---A------------GCA---------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	0	1	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA---CACCAGCAGCAGCA..........................................................................................	19	20	0.05	1	0	0	1	0
.............................................................................................................................................................................................................................................................................ACAAC------------------AGCAG--C----------------------------------------------------AGCAAC---A------------G.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	20	0.05	1	0	0	1	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA---CACCAGCAGCAGC...........................................................................................	18	20	0.05	1	0	0	1	0

droYak3

GC--TGCAGCAGCA------------------------------------------------------------------GC------------------------A-------------------------------ACAGCACATGCTGCAGCAGCATCAG------------------------------CTGCAGC-AAC--AG-CT-------------------------------GCAACA-------------------------------------------------------------------------------------------GCAACAGCAGCAG-----C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACC---AACAGCAGT--------TGCAGC------AGCAGCAGCAACAGCACCACCAACTCGCTCATCCCCACCAGCCGCACACACCGC--------------------------------------------------------GCCCCAGTACGCCACCCACCACGGCG--CAGCA---GATC--------------------------------------------------------------C-------ACATCACGGCCACCCAGCAC-----------CAGGCCGCC---------C---AGCAGCAGCTCCACCAGC---A-------------------------------------------------------------------GCAGCAGCCGT	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---AACAGCAGT--------TGCAGC------AGC..................................................................................................................................................................................................................................................................................................................................................................................	19	7	0.14	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGT--------TGCAGC------AGCAGCA..............................................................................................................................................................................................................................................................................................................................................................................	20	12	0.08	1	0	0	0	0	0	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGT--------TGCAGC------AGCAGCAGC............................................................................................................................................................................................................................................................................................................................................................................	21	12	0.08	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGC------AGCAGCAGCAACAG.......................................................................................................................................................................................................................................................................................................................................................................	20	20	0.05	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC------AGCAGCAGCAACAGCACCC..................................................................................................................................................................................................................................................................................................................................................................	22	20	0.05	1	0	0	0	0	0	1	0	0	0	0	0

droEre2

ATGCTGCTGGTGAA---G---TCGCACTACGTGCCGCCGGCC---AAGCATGCCACCG---AGCAC--------GCGACCAC------------------------A-------------------------------ACAACACGGGCGACAACAACGTCCA------------------------------GTACGAC-AAC--AG-CA-------------------------------GCAGCAGCAGC------------------AGCAGCAGCAACAGCAGCA----------ACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAG-----------CAGC------ACCAGCAACAACACACGCAGC------------------------------------AGCAACATCGGCCAAAGTGGAA--------------------------------GTGCA-G-------------------CCATCA------------------------ACAGTCACGTCA--------------------------------------TCGA-------------------AG--GGACTGA---------------CAGCAGCAGCATCAGCAGCAGCAGC---A-------------------------------------------------------------------GCAGCAA-CGG	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
...............................................................CAC--------GCGACCAC------------------------A-------------------------------ACAACAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0
....................................................................................................................................................................................................................................................AGCAGCAGC------------------AGCAGCAGCA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	20	0.25	5	0	0	0	0	0	5	0
.........................................................................................................................................................................................................AAC--AG-CA-------------------------------GCAGCAGCAGC------------------A........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	20	0.20	4	0	0	0	4	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCATCAGCAGCAGC.....................................................................................	20	20	0.10	2	2	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................AGCAGCA----------ACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAG-----------CAGC------ACCA.................................................................................................................................................................................................................................................................................................................................................................................	22	12	0.08	1	0	0	0	1	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATCAGCAGCAGCAGC---A-------------------------------------------------------------------GC.........	21	20	0.05	1	0	0	0	0	0	1	0
...................................................................................................................................................................................................................................................................................GCAGCAACAGCAGCA----------ACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAG-----------CAGC------.....................................................................................................................................................................................................................................................................................................................................................................................	26	20	0.05	1	0	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCATCAGCAGCAGCAGC---...............................................................................	23	20	0.05	1	0	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCATCAGCAGCAGCAGC---A-------------------------------------------------------------------...........	21	20	0.05	1	0	0	0	0	1	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCATCAGCAGCAGCAGC---...............................................................................	22	20	0.05	1	0	0	0	0	0	1	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAGCAGCAGCAGC---A-------------------------------------------------------------------GCAGCA.....	23	20	0.05	1	0	0	0	1	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCAGCAGCAGCAGC---A-------------------------------------------------------------------GCA........	21	20	0.05	1	0	0	0	0	0	1	0
..................................................................................................................................................................................................................................................................................AGCAGCAACAGCAGCA----------ACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAG-----------CAG............................................................................................................................................................................................................................................................................................................................................................................................	26	20	0.05	1	1	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................GCAGCAACAGCAGCA----------ACA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAG-----------CA.............................................................................................................................................................................................................................................................................................................................................................................................	24	20	0.05	1	0	0	0	0	1	0	0

dgr_296

scaffold_15110:5962104-5962254 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Repeatable elements

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-19.8	-19.5	-19.3