dgr_293

Name	Class	Family	Strand
(TAA)n	Simple_repeat	Simple_repeat	+

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------############-------------------------------------- TTATTAGAGAGACAATCTCTAACGTCAGAGACTTGTGTAGATCTCCTCCGCCCACATGTTAGCAATATAATATGGTTTAAACCGGAATCAAATACGCTAGCTAATTTAATTAATATTATTTCCTTCGCTTCTTTAATAATAATAATAATAATAATAAAAATTCGAAATGTACTATATTAGGCATTGGATTTATCTTTCCAGCGCCTAATCTAGCGTATTTGATTTCTATAACTATTCTCGAATATAGAGTA ************************************************.......((((((.........((((....))))...........)))))).......((((.(((((((..............))))))).))))....................((((.(((...)))))))((((........)))).************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M041 female body
...............................................................................AACCGGAATCAAATACGCTAGCTA....................................................................................................................................................	24	0	2	0.50	1	1
................CTCTACCGTCAGAGATTT.........................................................................................................................................................................................................................	18	2	4	0.25	1	1
...............ACTCTACCGTCAGAGATTT.........................................................................................................................................................................................................................	19	3	17	0.18	3	3
................CTCTACCGTCAGAGATTTCT.......................................................................................................................................................................................................................	20	3	6	0.17	1	1
.................TCTACCGTCAGAGATTTCT.......................................................................................................................................................................................................................	19	3	14	0.07	1	1

AATAATCTCTCTGTTAGAGATTGCAGTCTCTGAACACATCTAGAGGAGGCGGGTGTACAATCGTTATATTATACCAAATTTGGCCTTAGTTTATGCGATCGATTAAATTAATTATAATAAAGGAAGCGAAGAAATTATTATTATTATTATTATTATTTTTAAGCTTTACATGATATAATCCGTAACCTAAATAGAAAGGTCGCGGATTAGATCGCATAAACTAAAGATATTGATAAGAGCTTATATCTCAT ************************************************.......((((((.........((((....))))...........)))))).......((((.(((((((..............))))))).))))....................((((.(((...)))))))((((........)))).************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M041 female body
..............................................................GTTTCATTATACCACATTTG.........................................................................................................................................................................	20	3	9	0.11	1	1

Species	Coordinate	ID	Alignment
droGri2	scaffold_15110:5570599-5570849 +	dgr_293	---TTAT----TA------------------------------GAGAGACAATCT----------------------------------------------CTAACGTCAGAGACTTGTGTAGATCTCCTCCGCCCAC------ATGTTAGCAATATAATATGGTTTAAACCGGAATCAAATACGCTAGCT--AATTTAAT--TAATATTATTT--CCTTCGCTTCTTT----------------------------------------------------------------------------A---ATAATAATAATAA---TAATAATAA---------------------AA-ATTCG-AAATGTACTATA-------------------------TTA-GGCATT-----------------------------GGATTTATC----TTTCCAGC-GCCTAATCTAGCGTATTTGATTTC----TAT--A-ACTATTCTCGAATATA-----GA-----GTA-----
droVir3	scaffold_13049:7305974-7306254 -		---ATCT-------------------------------------TAGAAACA-----------------------------------CT------------CTAAGGTCCCAGACTTGTGTAGATCTCCTCCGCCCACACATACATATTAGCAATATAATATGGTTTAAACTGGAATCAAATACGCTT-GC--AATTTGAT--AAATT-----CCCTTCACGTTTCTAT----------------------------------------------------------------------------A---TATACA--T--------TTAATCA-----------------TC---AA-ATCTA-ACACGTAGTTATTAGGCAT-T--GTTTAGTCGAAACATTTGGGCAAACGTTTGCCAAACAT---CAT------TTGGCATTTAGCTTA-TTATAATGAGCCCC---CAGCGTATTTGATTTC----TGT--A-ACTATTCTCGAATAA---------------------
droMoj3	scaffold_6680:5562855-5563225 -		---TCAGCGT----------------------------------ATG---------------CAACTTCGAG------TATATTAAAGTCTTAGGCATCATCTAAGATCCCAGACTCAAGTAGATCTCCTCCGCCCACAC----ATATTAGTAATATAATATGGTTTAAACTGGAATCAAATACGCTT-GC--AATTTGAT--AAATT-----CACTTTTCGTTCACCT----------GTAATCGCACATACATAAATACACACACGAACACACACCAACACA----C----------------TC-TAAC--ATA-AGCAC---ATA------------------CAAACACCACA--AAT--CATTTAGTT-ATAAGCAT-TTGTTTTAGTCAGACATTTGGGCAATTCGGTTGCCAAC---------TGATTTTTGGCATTTAGA----TTATAATT-GGCCC---CAGCGTATTTGATTTC----TGT---GACTATTCTCGAATAATCAATCGTATTCAATA-----
droWil2	scf2_1100000004729:738428-738530 -		---CTCAC------------------------------------ACAC-A-------------------------------CATACACTCA--------------TTT------TTGGTGTAGATCTCTCCGCCCCAT------ATCTTAGCTATATAATATGGTTTAATTTGAAATCAAATACGCTT-TTCCAATTTGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
dp5	XR_group8:4969073-4969346 +		---TTCTGGTCTA-------------------------------------------------GAGCGACGAC------ATTGATACGTTCT-----------------------TCTGTGTAGATCT---CCGCCCAC------GTCTTAGCTATATAATATGGTTTAAACTGGAATCAAACACGCTT-TT--AATTTGAT--AAATC--------TCATCGTTTTCCT----------------------------------------------------------------------------T---A--------------------------------------------------ACCCA-A-TTAGTTGATAAGATT-TTGGTTTAGTCAAATTTGTAGGGCATTCGAGTGCCGATCAG---CAATA-TTGATGGCATTTATA----TTTCCACG-GCCCT---GGGCGTATTTGATTTC----AAT--ATACAATTCTCGAATATT-----GTATGTAACATTC-A
droPer2	scaffold_38:717996-718265 -		---TTCTGGTCTA-------------------------------------------------GAGCGACGAC------ATTGATACGTTCT-----------------------TCTGTGTAGATCT---CCGCCCAC------GTCTTAGCTATATAATATGGTTTAAACTGGAATCAAACACGCTT-TT--AATTTGAT--AAATC--------TCATCGTTTTCCT----------------------------------------------------------------------------T---A--------------------------------------------------ACCCA-A-TTAGTTGATAAGATT-TTGGTTTAGTCAAATTTGTAGGGCATTCGAGTGCCGATCAG---CAATA-TTGATGGCATTTATA----TTTCCACG-GCCCT---GGGCGTATTTGATTTC----AAT--ATACAATTCTCGAATATT-----GTATGTAACA-----
droAna3	scaffold_13337:19962406-19962709 +		------------------------------------------------------------ATGAGCGTCGTCGATAACGTTCGTACGT--------------------------TCTGTGTAGATCTCCTCCGCCCAC------ATCGTAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTT-TT--AATTTGAT--AAATC--------TCTTTGTTTTCCC-CAAGCGCCC---------------------------------------CTCCCCCTAATCCCAGAAATTTAGGAA--------CT--------------ATC--------------------------G-TCCCA-ATTTAGTTAATAAGAAT-TTGGTTTAGTCAAATTGTTAGGGCATTCGAGTGCCGATCAT---CGATG-TTGTTGGCATTTATC----TTTCCACG-GCCCT---GGGCGTATTTGATTTC----TTT--ATACAATTCTCGAATATT-----GT-------A--CC-
droBip1	scf7180000396529:446939-447190 -		---T-----------------------------------------------------------------------------------------------------------------GTGTAGATCTCCTCCGCCCAC------ACCGTAGCTATGTAATATGGTTTAATCTGGAATCAAATACGCTT-TT--AATTTGAT--AAATC--------TCTTTGTTTAACC-----------------------------------------------------------TCCCACGAACCTAGGTA------------------------------------------------------CTCCCA-ATTTAGTTAATAAGACT-TTGATTTAGTCAAATTGTTAGGGCATTCGAGTGCCGATCAT---CGATG-TTGTTGGCATTTATC----TTTCCAAAGGCCCT---GGGCGTATTTGATTTC----TTT--ATACAATTCTCGAATATT-----GT-------A--CCA
droKik1	scf7180000302510:686190-686524 -		GGTTCAC-------------------------------------AGGGAAGATGTT--AGATGAGCGTCGTTAATATATATAGTACGT--------------------------TCCGTGTAGATCTCCTCCGCCCAC------GTCATAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTTTTT--AATTTGATATAAATC--------TTATTGTTTACCC-C-----CTC---------------------------------------GTCCCCC---C----------------T---TGAATAGAAAGAAG---AGA------------------GAAAC---AAAT-TCCCA-ATTTAGTTGATAAGCTTTTTGGTTTAGTCAAATTGTTAGGGCATTCGAGTGCCGATCAT---CGATGTTTGTTGGCATTTATCACACTTTCCAAG-GCCCT---GGGCGTATTTGATTTCCCAATCT--ATACAATTCTCGAATATT-----GT-------A--C-A
droFic1	scf7180000453929:654762-655114 +		---GTAC----ACAGGTCACGATTCACAAGTCCAGAGACTTCACAGGGAAGATGTT--TGATGAGCGCTGTGGAT-------GTACGT--------------------------TTCGTGTAGATCTCCTCCGCCCAC------GTCTTAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTT-TT--AATTTGAT--AAATC--------TCTTCGTTTCCCT----------A--------------------C-CCCCCAAACCCCCAACCTCCCC----C----------------CC-AAAA--AAA-AGAAG--------------------------------AAAA-CCCCA-ATTTAGTTGATAAGCTT-TTGGTTTAGTCAAATTGTTAGGGCATTCGAGTGCCGATCAT---CGATG-TTGTTGGCATTTATC----TTTCCAAA-GCCCT---GGGCGTATTTGATTTC----TCTATATACAATTCTCGAATATT-----GTAA--------CTA
droEle1	scf7180000491193:1807293-1807569 -		---TCGT-------------------------------------AGGGAAGATGTT--TGATGAGCGTCGTTGAT-------GTACGT--------------------------TTCGTGTAGATCTCCTCCGCCCAC------GTCTTAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTT-TT--AATTTGAT--AAATC--------TCTTTGTTTCCCC----------------------------------------------------------------------------A---AAA---------------------------------------------AA-ACCCA-ATTTAGTTGATAAGCTT-TTGGTTTAGTCAAATTGTTAGGGCATTCGAGTGCCGATCAT---CGATG-TTGTTGGCATTTATA----TTTCCACA-GCCCT---GGGCGTATTTGATTTC----TAT--ATACAATTCTCGAATATT-----GT-------A-----
droRho1	scf7180000780183:64010-64285 -		---TTCT-------------------------------------AGGGAAGATGTT--TGATGAGCGTCGTTGAT-------GTACGT--------------------------TTCGTGTAGATCTCCTCCGCCCAC------ATCTTAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTT-TT--AATTTGAT--AAATC--------TCTTTGTTTCCCC----------------------------------------------------------------------------A---AA----------------------------------------------AA-CCCCA-ATTTAGTTGATAAGCTT-TTGGTTTAGTCAAATTGTTAGGGCATTCGAGTGCCGATCAT---CGATG-TTGTTGGCATTTATA----TTTCCACA-GCCCT---GGGCGTATTTGATTTC----TTT--ATACAATTCTCGAATATT-----GT-------A-----
droBia1	scf7180000302193:4510468-4510748 -		---TCAT-------------------------------------GGGGAAGATGTT--AGATGAGCGTCGTTGAT-------GTACGT--------------------------TTCGTGTAGATCTCCTCCGCCCAC------GTCGTAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTT-TT--AATTTGAT--AAATC--------TCTTCGTTTCCCC----------------------------------------------------------------------------C---AAAACA-----------------------------------------AAA-CCCCA-ATTTAGTTGATAAGCTT-TTGGTTTAGTCAAATTGTTAGGGCATTCGAGTGCCGATCAT---CGATG-TTGTTGGCATTTATA----TTTCCACA-GCCCT---GGGCGTATTTGATTTC----TTT--ATACAATTCTCGAATATT-----GT-------A-----
droTak1	scf7180000415809:913184-913477 -		---TCAA---------------------ACTTC--AGACTTTAGAGGGAAGATGTTTGAGATGAGCGTCGTCAAT-------GTACGT--------------------------TTCGTGTAGATCTCCTCCGCCCAC------ATCATAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTT-TT--CATTTGAT--AAATC------TCTCTTTGTTTCCCC----------------------------------------------------------------------------A---AA----------------------------------------------AA-ACCCA-ATTTAGTTGATAAGCTT-TTGGTTTAGTCAAATTGTTAGGGCATTCGAGTGCCGATCAT---CGATG-TTGTTGGCATTTATC----TTTCCACA-GCCCT---GGGCGTATTTGATTTC----CTT--ATACAATTCTCGAATATT-----GT-------A-----
droEug1	scf7180000409711:4503849-4504130 -		---T----------------------------------------------------------------------------------------------------------------CGTGTAGATCTCCTCCGCCCAC------GTCATAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTT-TT--AATTTGAT--AAATC--------TCTATGTTTCCCC-----------------------------------------------------------T----------------TT-AAAAAAA---AAAAGAAAAAAAACAAAAGAAAAAACCAAGAAAC---AGAA-ACCCA-ATTTAGTTGATAAGCTT-TTGGTTTAGTCAAATTGTTAGGGCATTCGAGTGCCGATCATCATCGATG-TTGTTGGCATTTATA----TTTCCACG-GCCCA---GGGCGTATTTGATTTC----TTT--ATACAATTCTCGAATATT-----GT-------A-----
dm3	chr3L:6942990-6943306 -		---TCAC--------------------AAGTCCAGAGACTTCAGAGGGAAGATGTT--AGATGAGCGTCGGTGAT-------GTACGT--------------------------ATCGTGTAGATCTCCTCCGCCCAC------ATCATAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTT-TT--AATTTGAT--TAATC--------TCTTTGTTCCCCC----------------------------------------------------------------------------C---AAAACAAAACAAA---ACAAAACAA---------------------AA-ACCCC-ACATTTAGTTGATAAGCTT-TTGGTTTAGTCAAATTGTTAGGGCATTCGAGTGCCGATCAT---CGATG-TTGTTGGCATTTATC----TTTCCAGA-GCCCT---GGGCGTATTTGATTTC----TTT--ATACAATTCTCGAATATT-----GT-------A--CG-
droSim2	3l:6805036-6805325 -		---TCAT-------------------------------------AGGG-AGATGTT--AGATGAGCGTCGGTGAT-------GTACGT--------------------------ATCGTGTAGATCTCCTCCGCCCAC------ATAATAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTT-TT--AATTTGAT--TAATC--------TCTTTGTTCACCC----------------------------------------------------------------------------C---AAAACAAAA--------CAAAACAT---------------------AA-ACCCC-ACATTTAGTTGATAAGCTT-TTGGTTTAGTCAAATTGTTAGGGCATTCGAGTGCCGATCAT---CGATG-TTGTTGGCATTTATC----TTTCCAGA-GCCCT---GGGCGTATTTGATTTC----TTT--ATACAATTCTCGAATATT-----G--------------
droSec2	scaffold_2:6869974-6870229 -		---T----------------------------------------------------------------------------------------------------------------CGTGTAGATCTCCTCCGCCCAC------ATAATAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTT-TT--AATTTGAT--TAATC--------TCTTTGTTCACCC----------------------------------------------------------------------------C---AAAACAAAA--------CAAAAGAT---------------------AA-ACCCC-ACATTTAGTTGATAAGCTT-TTGGTTTAGTCAAATTGTTAGGGCATTCGAGAGCCGATCAT---CGATG-TTGTTGGCATTTATC----TTTCCAGA-GCCCT---GGGCGTATTTGATTTC----TTT--ATACAATTCTCGAATATT-----GT-------A--CTT
droYak3	3L:7526066-7526354 -		---TCAT-------------------------------------AGGGAAGATGTT--AGATGAGCGTCGGTGAT-------GTGCGT--------------------------ATCGTGTAGATCTCCTCCGCCCAC------ATCATAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTT-TT--AATTTGAT--TAATC--------TCTTTGTTTCCTC----------------------------------------------------------------------------C---CAAACAAAA------------------------------AAAC---AAAA-CCC-ACATTTAGTTGATAAGCTT-TTGGTTTAGTCAAATTGTTAGGGCATTCGAGTGCCGATCAT---CGATG-TTGTTGGCATTTATC----TTTCCAGA-GCCCT---GGGCGTATTTGATTTC----TTT--ATACAATTCTCGAATATT-----GT-------A-----
droEre2	scaffold_4784:4415653-4415927 +		---------------------------------------------------ATGTT--AGATGAGCGTCGGTGAT-------GTGCGT--------------------------ATCGTGTAGATCTCCTCCGCCCAC------ATCGTAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTT-TT--AATTTGAT--TAATA--------TCTTTCTTCACACCC-----C---------------------------------------------------TC---------------CCAAAA--AAA-A----------------------------------------A-A-C-ACATTTAGTTGATAAGCTT-TTGGTTTAGTCAAATTGTTAGGGCATTCGAGTGCCGATCAT---CGATG-TTGTTGGCATTTATC----TTTCCAGA-GCCCT---GGGCGTATTTGATTTC----TTT--ATACAATTCTCGAATATT-----GT-------A-----

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droGri2

---TTAT----TA------------------------------GAGAGACAATCT----------------------------------------------CTAACGTCAGAGACTTGTGTAGATCTCCTCCGCCCAC------ATGTTAGCAATATAATATGGTTTAAACCGGAATCAAATACGCTAGCT--AATTTAAT--TAATATTATTT--CCTTCGCTTCTTT----------------------------------------------------------------------------A---ATAATAATAATAA---TAATAATAA---------------------AA-ATTCG-AAATGTACTATA-------------------------TTA-GGCATT-----------------------------GGATTTATC----TTTCCAGC-GCCTAATCTAGCGTATTTGATTTC----TAT--A-ACTATTCTCGAATATA-----GA-----GTA-----	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
........................................................................................................................................................................AACCGGAATCAAATACGCTAGCT--A...................................................................................................................................................................................................................................................................................................................................................	24	2	0.50	1	1	0

droVir3

---ATCT-------------------------------------TAGAAACA-----------------------------------CT------------CTAAGGTCCCAGACTTGTGTAGATCTCCTCCGCCCACACATACATATTAGCAATATAATATGGTTTAAACTGGAATCAAATACGCTT-GC--AATTTGAT--AAATT-----CCCTTCACGTTTCTAT----------------------------------------------------------------------------A---TATACA--T--------TTAATCA-----------------TC---AA-ATCTA-ACACGTAGTTATTAGGCAT-T--GTTTAGTCGAAACATTTGGGCAAACGTTTGCCAAACAT---CAT------TTGGCATTTAGCTTA-TTATAATGAGCCCC---CAGCGTATTTGATTTC----TGT--A-ACTATTCTCGAATAA---------------------	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
...............................................AAACA-----------------------------------CT------------CTAAGGTCCCAGACTTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	2.00	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................AACATTTGGGCAAACGTTTGC...................................................................................................................	21	1	2.00	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TCCCAGACTTGTGTAGATCTCCTC..................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2
.........................................................................................................................................................................ACTGGAATCAAATACGCTT-GC--AATTT...............................................................................................................................................................................................................................................................................................................................................	26	1	2.00	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................TAGATCTCCTCCGCCCAC...........................................................................................................................................................................................................................................................................................................................................................................................................	18	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2
.............................................................................................................................................................................................................................................................................................................................................................................................AT-T--GTTTAGTCGAAACATTTGGGC.............................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................GTCCCAGACTTGTGTAGAT........................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................GAAACA-----------------------------------CT------------CTAAGGTCCCAGACTTGTGT............................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................ACGTAGTTATTAGGCAT-T--GTTTAGT...........................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................TCCCAGACTTGTGTAGATCTCCTCCGC...............................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................ACATTTGGGCAAACGTTTGCC..................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................CAAATACGCTT-GC--AATTTG..............................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................CCCAGACTTGTGTAGATCT......................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................ATCAAATACGCTT-GC--AATTT...............................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCCCC---CAGCGTATTTGA...................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................GTTTAGTCGAAACATTTGGGCA............................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................AT-T--GTTTAGTCGAAACATTTGGGCA............................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................ATACA--T--------TTAATCA-----------------TC---AA-ATCTA-AC.......................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................ATCTA-ACACGTAGTTATTAGG.........................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................GTCCCAGACTTGTGTAGATCTCC....................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................ATAATATGGTTTAAACTGGA......................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................GAT--AAATT-----CCCTTCACGTTTCTAT----------------------------------------------------------------------------A---T...............................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................CT------------CTAAGGTCCCAGACTTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................CTAAGGTCCCAGACTTGTGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................GGTCCCAGACTTGTGTAGATCTCCTC..................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................TGTGTAGATCTCCTCCGCCC.............................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................AACA-----------------------------------CT------------CTAAGGTCCCAGACTTGTGT............................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................GCAT-T--GTTTAGTCGAAACATTTGGGC.............................................................................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................TCACGTTTCTAT----------------------------------------------------------------------------A---TATACA--T--------...............................................................................................................................................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................TTAGTCGAAACATTTGGGCAAACGTT......................................................................................................................	26	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTGATTTC----TGT--A-ACTATTCT............................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................ACA-----------------------------------CT------------CTAAGGTCCCAGACTTGTGT............................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................AACATTTGGGCAAACGTTTGCC..................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................GGTCCCAGACTTGTGTAGATCTC.....................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................AACAT---CAT------TTGGCATTTAGCT...................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTC----TGT--A-ACTATTCTCGAAT.......................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................TAATCA-----------------TC---AA-ATCTA-ACACGTAGT................................................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................CTTGTGTAGATCTCCTCCGC...............................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................A-----------------TC---AA-ATCTA-ACACGTAGTTATTAGGCA.......................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................AATACGCTT-GC--AATTTGAT--AAA.......................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................T--GTTTAGTCGAAACATTTGGGC.............................................................................................................................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................GGCAAACGTTTGCCAAACAT---CAT------TTGGC...........................................................................................	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................ATTAGCAATATAATATGGTTTA.............................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................TAGTCGAAACATTTGGGCA............................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................GTGTAGATCTCCTCCGCCCACACATACAT...................................................................................................................................................................................................................................................................................................................................................................................................	29	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................GTCCCAGACTTGTGTAGATCT......................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................CTA-ACACGTAGTTATTAGGCAT-.....................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................ATCTA-ACACGTAGTTATTA...........................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................GACTTGTGTAGATCTCCTCCGCC..............................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATAATGAGCCCC---CAGCGTATTT.....................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

---TCAGCGT----------------------------------ATG---------------CAACTTCGAG------TATATTAAAGTCTTAGGCATCATCTAAGATCCCAGACTCAAGTAGATCTCCTCCGCCCACAC----ATATTAGTAATATAATATGGTTTAAACTGGAATCAAATACGCTT-GC--AATTTGAT--AAATT-----CACTTTTCGTTCACCT----------GTAATCGCACATACATAAATACACACACGAACACACACCAACACA----C----------------TC-TAAC--ATA-AGCAC---ATA------------------CAAACACCACA--AAT--CATTTAGTT-ATAAGCAT-TTGTTTTAGTCAGACATTTGGGCAATTCGGTTGCCAAC---------TGATTTTTGGCATTTAGA----TTATAATT-GGCCC---CAGCGTATTTGATTTC----TGT---GACTATTCTCGAATAATCAATCGTATTCAATA-----	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
...........................................................................................................................ATCTCCTCCGCCCACAC----AT...................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
......................................................................................................................AGTAGATCTCCTCCGCCCACA..........................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
............................................ATG---------------CAACTTCGAG------TATATTAAAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................TTAAACTGGAATCAAATACGCTT-GC--....................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
.....................................................................................................................................................................................................................................................................................CAACACA----C----------------TC-TAAC--ATA-AGCAC---A..............................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0
...............................................................AACTTCGAG------TATATTAAAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1
....................................................................................................................................................................TTTAAACTGGAATCAAATACGCT..........................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	1
.......................................................................G------TATATTAAAGTCTTAGGCAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
..................................................................................................CATCTAAGATCCCAGACTCA...............................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................TA-AGCAC---ATA------------------CAAACACCAC................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0
..................................................................................................................................................................................................................................................................................CACCAACACA----C----------------TC-TAAC--A..........................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	1	0
......................................................................................................................................................................................................................................................................................................................................................................................................................CAATTCGGTTGCCAAC---------TGATTTTTGG............................................................................................	26	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................ACACACACCAACACA----C----------------TC-TAAC--...........................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................GTAGATCTCCTCCGCCCACAC----AT...................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
...........................................................................................................................................................................................................................TCGTTCACCT----------GTAATCGCACATAC........................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................ATTTAGTT-ATAAGCAT-TTGTTTTAGTCA.........................................................................................................................................	28	1	1.00	1	0	0	0	0	0	1
.....................................................................................................................................................................................................................................................................................................................AAC--ATA-AGCAC---ATA------------------CAAACACC..................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC---------TGATTTTTGGCATTTAGA----T...............................................................................	23	1	1.00	1	0	0	0	1	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTCGAATAATCAATCGTATTCA........	25	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................TTAAACTGGAATCAAATACGCT..........................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1
......................................................................................................................................................................................................GAT--AAATT-----CACTTTTCGTTCACCT----------GT....................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................AAATACACACACGAACACACAC................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTAGA----TTATAATT-GGCCC---CAGC...........................................................	25	1	1.00	1	1	0	0	0	0	0
..................................................................................................................................................................................................................................................................TACACACACGAACACACACC...............................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0
..........................................................................................................................................................................................................................TTCGTTCACCT----------GTAATCGCACATA.........................................................................................................................................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................GACATTTGGGCAATTCGGTT.....................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAATT-GGCCC---CAGCGTATTTGATTT................................................	27	1	1.00	1	0	0	0	0	0	1

droWil2

---CTCAC------------------------------------ACAC-A-------------------------------CATACACTCA--------------TTT------TTGGTGTAGATCTCTCCGCCCCAT------ATCTTAGCTATATAATATGGTTTAATTTGAAATCAAATACGCTT-TTCCAATTTGAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.........................................................................................CA--------------TTT------TTGGTGTAGATCTCTCCGCC...............................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0

dp5

---TTCTGGTCTA-------------------------------------------------GAGCGACGAC------ATTGATACGTTCT-----------------------TCTGTGTAGATCT---CCGCCCAC------GTCTTAGCTATATAATATGGTTTAAACTGGAATCAAACACGCTT-TT--AATTTGAT--AAATC--------TCATCGTTTTCCT----------------------------------------------------------------------------T---A--------------------------------------------------ACCCA-A-TTAGTTGATAAGATT-TTGGTTTAGTCAAATTTGTAGGGCATTCGAGTGCCGATCAG---CAATA-TTGATGGCATTTATA----TTTCCACG-GCCCT---GGGCGTATTTGATTTC----AAT--ATACAATTCTCGAATATT-----GTATGTAACATTC-A	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
...................................................................................TACGTTCT-----------------------TCTGTGTAGATCT---CCGC...............................................................................................................................................................................................................................................................................................................................................................................................................	25	1	6.00	6	0	0	0	0	0	0	0	3	3	0
......................................................................................................................................................................................................................................................................................................................................................................................................TAGTCAAATTTGTAGGGCATTCGAG......................................................................................................................	25	1	5.00	5	0	0	0	0	0	0	0	4	1	0
.............................................................................................................................................................................................................................................................................................................................................................................................TT-TTGGTTTAGTCAAATTTGTAGGGC.............................................................................................................................	26	1	3.00	3	0	0	0	0	0	0	0	0	2	1
...............................................................................................................................................................................................................................................................................................................................................................................................................TTGTAGGGCATTCGAGTGC...................................................................................................................	19	1	3.00	3	0	1	0	0	0	0	0	0	0	2
.....................................................................................................................................................................................................................................................................................................................................................................................................TTAGTCAAATTTGTAGGGCATTCGAG......................................................................................................................	26	1	2.00	2	0	1	0	0	0	0	0	1	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................TTTAGTCAAATTTGTAGGGC.............................................................................................................................	20	1	2.00	2	0	1	0	0	0	0	0	0	0	1
...............................................................................TTGATACGTTCT-----------------------TCTGTGTAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	2	0
.......................................................................................................................................................................................................................................................................................................................................................................................................AGTCAAATTTGTAGGGCATTCG........................................................................................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	2	0
...............................................................................................................................................................TATGGTTTAAACTGGAATCAAACACGC...........................................................................................................................................................................................................................................................................................................................................................	27	1	2.00	2	0	0	0	0	0	0	0	0	2	0
......................................................................................................................................................................................................................................................................................................................................................................................................TAGTCAAATTTGTAGGGCATTCGA.......................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	2	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT---GGGCGTATTTGATTTC----AAT--......................................	21	1	2.00	2	0	0	0	0	1	0	1	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................GTTTAGTCAAATTTGTAGGGC.............................................................................................................................	21	1	2.00	2	0	1	0	0	0	0	0	0	0	1
................................................................................................................................................................................................................................................................................................................................................................................................TTGGTTTAGTCAAATTTGTAGGG..............................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................TTAGTCAAATTTGTAGGGC.............................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	1
..........................................................................................................................................................................................TT-TT--AATTTGAT--AAATC--------TCAT.........................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...TTCTGGTCTA-------------------------------------------------GAGCGACGAC------ATTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................T-TTGGTTTAGTCAAATTTGTAGGGC.............................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	1	0	0
.......................................................................................................................................................................AAACTGGAATCAAACACGCTT-........................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................GATCT---CCGCCCAC------GTCTTAGCT............................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0
.......................................................................C------ATTGATACGTTCT-----------------------TCTGTGTAGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	1	0	0
.........TCTA-------------------------------------------------GAGCGACGAC------ATTGATACGTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................TTAGTCAAATTTGTAGGGCATTCGA.......................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................GTAGATCT---CCGCCCAC------GTCT.................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................TCCT----------------------------------------------------------------------------T---A--------------------------------------------------ACCCA-A-TTAGTTG..............................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
....................................................................CGAC------ATTGATACGTTCT-----------------------TCTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT---GGGCGTATTTGATTTC----AAT--AT....................................	23	1	1.00	1	0	0	0	0	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTAGGGCATTCGAGTGC...................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................T-TTGGTTTAGTCAAATTTGTAGG...............................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	1	0	0
....TCTGGTCTA-------------------------------------------------GAGCGACGAC------ATTGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................TTAGTCAAATTTGTAGGG..............................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	1
................................................................................................................................................................................................................................................................................................................................................................................TTAGTTGATAAGATT-TTGGTTTAGTCA.........................................................................................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................ATAAGATT-TTGGTTTAGTCAAAT......................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0	0	0	0	0
.......................................................................................................................................................................AAACTGGAATCAAACACGCTT-TT--....................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................GAGCGACGAC------ATTGATAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	1	0	0
.................................................................................GATACGTTCT-----------------------TCTGTGTAGATCT---CCGCC..............................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................AGTCAAATTTGTAGGGCATTCGAGTGC...................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	1
.....................................................................GAC------ATTGATACGTTCT-----------------------TCTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................GATT-TTGGTTTAGTCAAATTTGTAGGGC.............................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	1
.................................................................................................................................................TCTTAGCTATATAATATGG.................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0

droPer2

---TTCTGGTCTA-------------------------------------------------GAGCGACGAC------ATTGATACGTTCT-----------------------TCTGTGTAGATCT---CCGCCCAC------GTCTTAGCTATATAATATGGTTTAAACTGGAATCAAACACGCTT-TT--AATTTGAT--AAATC--------TCATCGTTTTCCT----------------------------------------------------------------------------T---A--------------------------------------------------ACCCA-A-TTAGTTGATAAGATT-TTGGTTTAGTCAAATTTGTAGGGCATTCGAGTGCCGATCAG---CAATA-TTGATGGCATTTATA----TTTCCACG-GCCCT---GGGCGTATTTGATTTC----AAT--ATACAATTCTCGAATATT-----GTATGTAACA-----	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
....................................................................CGAC------ATTGATACGTTCT-----------------------TCTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	8.00	8	8	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................TTAGTCAAATTTGTAGGGC.............................................................................................................................	19	1	3.00	3	3	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................TAGTCAAATTTGTAGGGC.............................................................................................................................	18	1	3.00	3	3	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................ATTTGTAGGGCATTCGAGT.....................................................................................................................	19	1	2.00	2	0	1	0	0	0	1
..................................................................................................................................................................................................................................................................................................................................................................................................GGTTTAGTCAAATTTGTAGGGC.............................................................................................................................	22	1	2.00	2	2	0	0	0	0	0
.....................................................................GAC------ATTGATACGTTCT-----------------------TCTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	2	0	0	0	0	0
....................................................................CGAC------ATTGATACGTTCT-----------------------TCTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................TTAGTCAAATTTGTAGGGCATTCGAGT.....................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
.....................................................................GAC------ATTGATACGTTCT-----------------------TCTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................TTTGTAGGGCATTCGAGTGC...................................................................................................................	20	1	1.00	1	0	0	0	0	0	1
.............................................................................................................................CT---CCGCCCAC------GTCTTAGCC............................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
....................................................................CGAC------ATTGATACGTTCT-----------------------TCTGG..............................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................A-TTAGTTGATAAGATT-TTGGTTTAGTCA.........................................................................................................................................	28	1	1.00	1	0	1	0	0	0	0
.........TCTA-------------------------------------------------GAGCGACGAC------ATTGATACGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0
................................................................GCGACGAC------ATTGATACGTTCT-----------------------TCTGT..............................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................TTAGTCAAATTTGTAGGGCATTCGAG......................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
..........CTA-------------------------------------------------GAGCGACGAC------ATTGATACGTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1
.......................................................................C------ATTGATACGTTCT-----------------------TCTGTGTAGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	1
..............................................................................................................................................................................................................TC--------TCATCGTTTTCCT----------------------------------------------------------------------------T---A--------------------------------------------------ACCCA-A-T....................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0
.........TCTA-------------------------------------------------GAGCGACGAC------ATTGATACGTTC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................CT---CCGCCCAC------GTCTTAGCT............................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
..........................................................................................................................................................................................................................ATCGTTTTCCT----------------------------------------------------------------------------T---A--------------------------------------------------ACCCA-A-TTAGTTG..............................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	1

droAna3

------------------------------------------------------------ATGAGCGTCGTCGATAACGTTCGTACGT--------------------------TCTGTGTAGATCTCCTCCGCCCAC------ATCGTAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTT-TT--AATTTGAT--AAATC--------TCTTTGTTTTCCC-CAAGCGCCC---------------------------------------CTCCCCCTAATCCCAGAAATTTAGGAA--------CT--------------ATC--------------------------G-TCCCA-ATTTAGTTAATAAGAAT-TTGGTTTAGTCAAATTGTTAGGGCATTCGAGTGCCGATCAT---CGATG-TTGTTGGCATTTATC----TTTCCACG-GCCCT---GGGCGTATTTGATTTC----TTT--ATACAATTCTCGAATATT-----GT-------A--CC-	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAT---CGATG-TTGTTGGC...........................................................................................	19	1	3.00	3	0	2	0	1	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................AATTGTTAGGGCATTCGAGTGCC..................................................................................................................	23	1	3.00	3	0	1	0	0	2	0
...........................................................................................................................................................................................................................................................................................................................................................................................GAAT-TTGGTTTAGTCAAATTGTTAGGGC.............................................................................................................................	28	1	2.00	2	0	2	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................TTGGTTTAGTCAAATTGTTAGGGC.............................................................................................................................	24	1	2.00	2	0	0	0	0	1	1
.....................................................................................................................................................................................................................................................................................................................................................................................................TTAGTCAAATTGTTAGGGC.............................................................................................................................	19	1	1.00	1	0	1	0	0	0	0
........................................................................................................................TAGATCTCCTCCGCCCAC------ATC..................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAT---CGATG-TTGTTGGCATT........................................................................................	22	1	1.00	1	0	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................GTGCCGATCAT---CGATG-TTGTTGGC...........................................................................................	24	1	1.00	1	0	1	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................AGTCAAATTGTTAGGGCATTCGAGT.....................................................................................................................	25	1	1.00	1	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACG-GCCCT---GGGCGTATTTGATT.................................................	22	1	1.00	1	0	1	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAATTCTCGAATATT-----...............	18	1	1.00	1	0	1	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCCACG-GCCCT---GGGCGTATTTGATT.................................................	26	1	1.00	1	1	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................AGTCAAATTGTTAGGGCATTCGAGTGCC..................................................................................................................	28	1	1.00	1	0	1	0	0	0	0
................................................................................................................................................................................................................................................................................................................A--------CT--------------ATC--------------------------G-TCCCA-ATTTAGTTA..............................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTAGGGCATTCGAGTGCC..................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAT---CGATG-TTGTTGG............................................................................................	18	1	1.00	1	0	1	0	0	0	0
.............................................................................................................................CTCCTCCGCCCAC------ATCGTA...............................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................TTTAGTCAAATTGTTAGGGCATT..........................................................................................................................	23	1	1.00	1	0	0	0	0	1	0
............................................................................................................................................................................................................................TGTTTTCCC-CAAGCGCCC---------------------------------------CTCCCCCC.......................................................................................................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTATC----TTTCCACG-GCCCT---...............................................................	20	1	1.00	1	0	1	0	0	0	0

droBip1

---T-----------------------------------------------------------------------------------------------------------------GTGTAGATCTCCTCCGCCCAC------ACCGTAGCTATGTAATATGGTTTAATCTGGAATCAAATACGCTT-TT--AATTTGAT--AAATC--------TCTTTGTTTAACC-----------------------------------------------------------TCCCACGAACCTAGGTA------------------------------------------------------CTCCCA-ATTTAGTTAATAAGACT-TTGATTTAGTCAAATTGTTAGGGCATTCGAGTGCCGATCAT---CGATG-TTGTTGGCATTTATC----TTTCCAAAGGCCCT---GGGCGTATTTGATTTC----TTT--ATACAATTCTCGAATATT-----GT-------A--CCA	Size	Hit Count	Total Norm	Total
No Reads

droKik1

GGTTCAC-------------------------------------AGGGAAGATGTT--AGATGAGCGTCGTTAATATATATAGTACGT--------------------------TCCGTGTAGATCTCCTCCGCCCAC------GTCATAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTTTTT--AATTTGATATAAATC--------TTATTGTTTACCC-C-----CTC---------------------------------------GTCCCCC---C----------------T---TGAATAGAAAGAAG---AGA------------------GAAAC---AAAT-TCCCA-ATTTAGTTGATAAGCTTTTTGGTTTAGTCAAATTGTTAGGGCATTCGAGTGCCGATCAT---CGATGTTTGTTGGCATTTATCACACTTTCCAAG-GCCCT---GGGCGTATTTGATTTCCCAATCT--ATACAATTCTCGAATATT-----GT-------A--C-A	Size	Hit Count	Total Norm	Total
No Reads

droFic1

---GTAC----ACAGGTCACGATTCACAAGTCCAGAGACTTCACAGGGAAGATGTT--TGATGAGCGCTGTGGAT-------GTACGT--------------------------TTCGTGTAGATCTCCTCCGCCCAC------GTCTTAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTT-TT--AATTTGAT--AAATC--------TCTTCGTTTCCCT----------A--------------------C-CCCCCAAACCCCCAACCTCCCC----C----------------CC-AAAA--AAA-AGAAG--------------------------------AAAA-CCCCA-ATTTAGTTGATAAGCTT-TTGGTTTAGTCAAATTGTTAGGGCATTCGAGTGCCGATCAT---CGATG-TTGTTGGCATTTATC----TTTCCAAA-GCCCT---GGGCGTATTTGATTTC----TCTATATACAATTCTCGAATATT-----GTAA--------CTA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

---TCGT-------------------------------------AGGGAAGATGTT--TGATGAGCGTCGTTGAT-------GTACGT--------------------------TTCGTGTAGATCTCCTCCGCCCAC------GTCTTAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTT-TT--AATTTGAT--AAATC--------TCTTTGTTTCCCC----------------------------------------------------------------------------A---AAA---------------------------------------------AA-ACCCA-ATTTAGTTGATAAGCTT-TTGGTTTAGTCAAATTGTTAGGGCATTCGAGTGCCGATCAT---CGATG-TTGTTGGCATTTATA----TTTCCACA-GCCCT---GGGCGTATTTGATTTC----TAT--ATACAATTCTCGAATATT-----GT-------A-----	Size	Hit Count	Total Norm	Total
No Reads

droRho1

---TTCT-------------------------------------AGGGAAGATGTT--TGATGAGCGTCGTTGAT-------GTACGT--------------------------TTCGTGTAGATCTCCTCCGCCCAC------ATCTTAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTT-TT--AATTTGAT--AAATC--------TCTTTGTTTCCCC----------------------------------------------------------------------------A---AA----------------------------------------------AA-CCCCA-ATTTAGTTGATAAGCTT-TTGGTTTAGTCAAATTGTTAGGGCATTCGAGTGCCGATCAT---CGATG-TTGTTGGCATTTATA----TTTCCACA-GCCCT---GGGCGTATTTGATTTC----TTT--ATACAATTCTCGAATATT-----GT-------A-----	Size	Hit Count	Total Norm	Total
No Reads

droBia1

---TCAT-------------------------------------GGGGAAGATGTT--AGATGAGCGTCGTTGAT-------GTACGT--------------------------TTCGTGTAGATCTCCTCCGCCCAC------GTCGTAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTT-TT--AATTTGAT--AAATC--------TCTTCGTTTCCCC----------------------------------------------------------------------------C---AAAACA-----------------------------------------AAA-CCCCA-ATTTAGTTGATAAGCTT-TTGGTTTAGTCAAATTGTTAGGGCATTCGAGTGCCGATCAT---CGATG-TTGTTGGCATTTATA----TTTCCACA-GCCCT---GGGCGTATTTGATTTC----TTT--ATACAATTCTCGAATATT-----GT-------A-----	Size	Hit Count	Total Norm	Total
No Reads

droTak1

---TCAA---------------------ACTTC--AGACTTTAGAGGGAAGATGTTTGAGATGAGCGTCGTCAAT-------GTACGT--------------------------TTCGTGTAGATCTCCTCCGCCCAC------ATCATAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTT-TT--CATTTGAT--AAATC------TCTCTTTGTTTCCCC----------------------------------------------------------------------------A---AA----------------------------------------------AA-ACCCA-ATTTAGTTGATAAGCTT-TTGGTTTAGTCAAATTGTTAGGGCATTCGAGTGCCGATCAT---CGATG-TTGTTGGCATTTATC----TTTCCACA-GCCCT---GGGCGTATTTGATTTC----CTT--ATACAATTCTCGAATATT-----GT-------A-----	Size	Hit Count	Total Norm	Total
No Reads

droEug1

---T----------------------------------------------------------------------------------------------------------------CGTGTAGATCTCCTCCGCCCAC------GTCATAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTT-TT--AATTTGAT--AAATC--------TCTATGTTTCCCC-----------------------------------------------------------T----------------TT-AAAAAAA---AAAAGAAAAAAAACAAAAGAAAAAACCAAGAAAC---AGAA-ACCCA-ATTTAGTTGATAAGCTT-TTGGTTTAGTCAAATTGTTAGGGCATTCGAGTGCCGATCATCATCGATG-TTGTTGGCATTTATA----TTTCCACG-GCCCA---GGGCGTATTTGATTTC----TTT--ATACAATTCTCGAATATT-----GT-------A-----	Size	Hit Count	Total Norm	Total
No Reads

dm3

---TCAC--------------------AAGTCCAGAGACTTCAGAGGGAAGATGTT--AGATGAGCGTCGGTGAT-------GTACGT--------------------------ATCGTGTAGATCTCCTCCGCCCAC------ATCATAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTT-TT--AATTTGAT--TAATC--------TCTTTGTTCCCCC----------------------------------------------------------------------------C---AAAACAAAACAAA---ACAAAACAA---------------------AA-ACCCC-ACATTTAGTTGATAAGCTT-TTGGTTTAGTCAAATTGTTAGGGCATTCGAGTGCCGATCAT---CGATG-TTGTTGGCATTTATC----TTTCCAGA-GCCCT---GGGCGTATTTGATTTC----TTT--ATACAATTCTCGAATATT-----GT-------A--CG-	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
..............................TCCAGAGACTTCAGAGGGAAGATGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	99.00	99	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	1	2	0	2	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	1	4	3	0	4	5	0	0	0	0	3	0	1	5	3	0	2	0	1	0	3	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	0	2	0	9	0	0	0	0	4	5	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	6	1	4	8	0	0	0	0	0
.......................................TTCAGAGGGAAGATGTT--AGATGAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	36.00	36	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	1	1	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	3	0	0	2	0	0	0	0	0	0	0	1	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	1	1	2	0	1	0	0	0	0	2	2	0	0	0	0	0	1	2	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	0	0	0
..............................TCCAGAGACTTCAGAGGGAAGATG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	23.00	23	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	4	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	2	0	4	0	1	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................TCGGTGAT-------GTACGT--------------------------ATCGTGTAGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	19.00	19	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	2	0	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	1	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................TTCGAGTGCCGATCAT---CGATG-TTGT...............................................................................................	25	1	18.00	18	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0
.......................................................T--AGATGAGCGTCGGTGAT-------GTACGT--------------------------A..................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	17.00	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	1	1	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	0
...TCAC--------------------AAGTCCAGAGACTTCAGAGGGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	16.00	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	6	0	0	0	0	0	0	0	3	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.......................................................T--AGATGAGCGTCGGTGAT-------GTACGT--------------------------AT.................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	13.00	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	2	0	0	0	0	0
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...................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAT---CGATG-TTGTTGGC...........................................................................................	19	1	11.00	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
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...............................................GAAGATGTT--AGATGAGCGTCGGTGAT-------GT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................TT--AGATGAGCGTCGGTGAT-------GTACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAT---CGATG-TTGTTGG............................................................................................	18	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................ACTTCAGAGGGAAGATGTT--AGATGAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0
.......................................................T--AGATGAGCGTCGGTGAT-------GT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................TTCGAGTGCCGATCAT---CGATG-TTGTT..............................................................................................	26	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0
.....................................................GTT--AGATGAGCGTCGGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.................................................AGATGTT--AGATGAGCGTCGGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................TGTT--AGATGAGCGTCGGTGAT-------GTAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................AGATGAGCGTCGGTGAT-------GTAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.................................................................................................................................................................................................................................................................................................................................................................................TAGTTGATAAGCTT-TTGGTTTAGTC..........................................................................................................................................	25	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
.................................................AGATGTT--AGATGAGCGTCGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................TAGGGCATTCGAGTGCCGATCAT---CGATG-...................................................................................................	28	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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....................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAT---CGATG-TTGTTGGCA..........................................................................................	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................TGAGCGTCGGTGAT-------GTACGT--------------------------ATCG...............................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCCGATCAT---CGATG-TTGTTGG............................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................TGGTTTAATCTGGAATCAAATACGCT..........................................................................................................................................................................................................................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................AGATGAGCGTCGGTGAT-------GTACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................TCCAGAGACTTCAGAGGGAAGATGTT--...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................T--AGATGAGCGTCGGTGAT-------GTACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................GGAAGATGTT--AGATGAGCGTCGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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..............................................................................................................................................................................................................................................................................................................................................................................................................TTGTTAGGGCATTCGAGTGCCGATC..............................................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAT---CGATG-TTGTTGGCATT........................................................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................TCAAATTGTTAGGGCATTCGAGTGCCGA................................................................................................................	28	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................GAT-------GTACGT--------------------------ATCGTGTAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................GTACGT--------------------------ATCGTGTAGATCTCCTCCGCC..............................................................................................................................................................................................................................................................................................................................................................................................................	27	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................GATGTT--AGATGAGCGTCGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................ATCGTGTAGATCTCCTCCGCC..............................................................................................................................................................................................................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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........................................................................GAT-------GTACGT--------------------------ATCGTGTAGAT........................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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...........................................................GATGAGCGTCGGTGAT-------GTAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
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...........................................................................................................................................................................................................................................................................................................................................................................................................................CGAGTGCCGATCAT---CGATG-TTGT...............................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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....................................GACTTCAGAGGGAAGATGTT--AGATGAGT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................GATGAGCGTCGGTGAT-------GT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGA-GCCCT---GGGCGTATTTGATT.................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................TGTT--AGATGAGCGTCGGTGAT-------GTA................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
..................................................................................................................................................................GGTTTAATCTGGAATCAAATACGCTT-T.......................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCT---GGGCGTATTTGATTTC----T..........................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

---TCAT-------------------------------------AGGG-AGATGTT--AGATGAGCGTCGGTGAT-------GTACGT--------------------------ATCGTGTAGATCTCCTCCGCCCAC------ATAATAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTT-TT--AATTTGAT--TAATC--------TCTTTGTTCACCC----------------------------------------------------------------------------C---AAAACAAAA--------CAAAACAT---------------------AA-ACCCC-ACATTTAGTTGATAAGCTT-TTGGTTTAGTCAAATTGTTAGGGCATTCGAGTGCCGATCAT---CGATG-TTGTTGGCATTTATC----TTTCCAGA-GCCCT---GGGCGTATTTGATTTC----TTT--ATACAATTCTCGAATATT-----G--------------	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
...................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAT---CGATG-TTGTTGGC...........................................................................................	19	1	11.00	11	0	9	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................TTGGTTTAGTCAAATTGTTAGGGCATT..........................................................................................................................	27	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	4	2	0	0	0
....................................................TGTT--AGATGAGCGTCGGTGAT-------GTACGT--------------------------A..................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	5.00	5	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................T-TTGGTTTAGTCAAATTGTTAGGGC.............................................................................................................................	25	1	3.00	3	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.......................................................T--AGATGAGCGTCGGTGAT-------GTACGT--------------------------AT.................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	3.00	3	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0
......................................................TT--AGATGAGCGTCGGTGAT-------GTACGT--------------------------A..................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	3.00	3	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0
...................................................................TCGGTGAT-------GTACGT--------------------------ATCGTGTAGATC.......................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	3.00	3	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................GATG-TTGTTGGCATT........................................................................................	15	3	2.67	8	0	0	0	0	0	0	0	0	0	0	0	0	0	8	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................T-TTGGTTTAGTCAAATTGTTAGGGCATT..........................................................................................................................	28	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................AATTGTTAGGGCATTCGAGTGCC..................................................................................................................	23	1	2.00	2	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................TTAGTCAAATTGTTAGGGC.............................................................................................................................	19	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................TGTT--AGATGAGCGTCGGTGAT-------GTACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................TTTAGTCAAATTGTTAGGGCATTCGA.......................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
....................................................................................................................................................TAGCTATATAATATGGTTTAATCTGGA......................................................................................................................................................................................................................................................................................................................................................................	27	1	2.00	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................TAGTCAAATTGTTAGGGCATTCGAGTGC...................................................................................................................	28	1	2.00	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0
.............................................................TGAGCGTCGGTGAT-------GTACGT--------------------------ATCGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	2.00	2	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................GTTTAGTCAAATTGTTAGGG..............................................................................................................................	20	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................TT-TTGGTTTAGTCAAATTGTTAGGGCAT...........................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
.......................................................................TGAT-------GTACGT--------------------------ATCGTGTAGATCTCCTC..................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
......................................................TT--AGATGAGCGTCGGTGAT-------GTACGT--------------------------AT.................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..........................................................................T-------GTACGT--------------------------ATCGTGTAGATCTCCTCCGC...............................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
..................................................................................GTACGT--------------------------ATCGTGTAGATCTCCTCCGCC..............................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTAGTCAAATTGTTAGGGCATT..........................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAT---CGATG-TTGTTGGCATT........................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................TCCTCCGCCCAC------ATAATAGCTATA.........................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.......................................................T--AGATGAGCGTCGGTGAT-------GTACGT--------------------------ATC................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................TAAGCTT-TTGGTTTAGTCAAATTG....................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
............................................................................................................................................................................................................AATC--------TCTTTGTTCACCC----------------------------------------------------------------------------C---AAAACA..........................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................T--AGATGAGCGTCGGTGAT-------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................TTCGAGTGCCGATCAT---CGATG-TTGTT..............................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
......................................................................................................................................................................TAATCTGGAATCAAATACGCTT-TT--AAT.................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
..................................................GATGTT--AGATGAGCGTCGGTGAT-------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................TACGT--------------------------ATCGTGTAGATCTCCTCCGCCC.............................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGTGCCGATCAT---CGATG-TTGT...............................................................................................	24	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................TTAGTCAAATTGTTAGGGCATTCGAGT.....................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.......................................................T--AGATGAGCGTCGGTGAT-------GTACGT--------------------------A..................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.....................................................GTT--AGATGAGCGTCGGTGAT-------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
....................................................................CGGTGAT-------GTACGT--------------------------ATCGTGTAGATCT......................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..........................................................AGATGAGCGTCGGTGAT-------GTACGT--------------------------AT.................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGAGTGCCGATCAT---CGATG-TTGTT..............................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................ATGGTTTAATCTGGAATC...................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT--ATACAATTCTCGAATATT-----...............	20	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................T--AGATGAGCGTCGGTGAT-------GTACG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----TTT--ATACAATTCTCGAAT.......................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTATC----TTTCCAGA-GCCCT---GGGC...........................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---GGGCGTATTTGATTTC----TTT--ATACA.................................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.....................................................................GGTGAT-------GTACGT--------------------------ATCGTGTAGATCT......................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................AT---CGATG-TTGTTGGCATT........................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...TCAT-------------------------------------AGGG-AGATGTT--AGA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................TTAGTCAAATTGTTAGGGCAT...........................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTAGGGCATTCGAGTGCC..................................................................................................................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTAGTCAAATTGTTAGGGCAT...........................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC----TTT--ATACAATTCTCGAATATT-----...............	23	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................TAGTCAAATTGTTAGGGCATT..........................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCAGA-GCCCT---GGGCGTATTTGA...................................................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGAGTGCCGATCAT---CGATG-TTGTTG.............................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCT---GGGCGTATTTGATTTC----T..........................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................TAGTCAAATTGTTAGGGCATTCGAG......................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCAT---CGATG-TTGTTG.............................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCAT---CGATG-TTGTTGGC...........................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................TT--AGATGAGCGTCGGTGAT-------GTACGT--------------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................TTTAGTTGATAAGCTT-TTGGTT...............................................................................................................................................	22	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................TG-TTGTTGGCATTTATC----TTTCCAGA-.......................................................................	25	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
...................................................ATGTT--AGATGAGCGTCGGTGAT-------GT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
....................................................................CGGTGAT-------GTACGT--------------------------ATCGTGTAGATCTC.....................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.................................................AGATGTT--AGATGAGCGTCGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
.......................................................T--AGATGAGCGTCGGTGAT-------GTAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................TT-TTGGTTTAGTCAAATTGTTAGGGCATT..........................................................................................................................	29	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
..........................................................................T-------GTACGT--------------------------ATCGTGTAGATCTCCTCCGCC..............................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................T---------------------AA-ACCCC-ACATTTAGTTGATAAGC........................................................................................................................................................	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................TAGTCAAATTGTTAGGGC.............................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTAGGGCATTCGAGTGCCGATC..............................................................................................................	26	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................T--------------------------ATCGTGTAGATCTCCTCCGCCCAC------A....................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................TATATAATATGGTTTAATCTGGAATC...................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................TTGGTTTAGTCAAATTGTTAGGGCAT...........................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................TAGGGCATTCGAGTGCCGATCAT---CGA......................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................TAGTCAAATTGTTAGGGCATTCGAGTGCCGA................................................................................................................	31	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................TTTAGTCAAATTGTTAGGGCATTCGAG......................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
....................................................TGTT--AGATGAGCGTCGGTGAT-------GTAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................T-TTGGTTTAGTCAAATTGTTAGGGCA............................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAT---CGATG-TTGTTGGCATTTAT.....................................................................................	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................GGGCATTCGAGTGCCGATCAT---CGATG-...................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................TTAGTCAAATTGTTAGGGCATTCGAGTGC...................................................................................................................	29	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................C---AAAACAAAA--------CAAAACAT---------------------..................................................................................................................................................................................	18	2	0.50	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0

droSec2

---T----------------------------------------------------------------------------------------------------------------CGTGTAGATCTCCTCCGCCCAC------ATAATAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTT-TT--AATTTGAT--TAATC--------TCTTTGTTCACCC----------------------------------------------------------------------------C---AAAACAAAA--------CAAAAGAT---------------------AA-ACCCC-ACATTTAGTTGATAAGCTT-TTGGTTTAGTCAAATTGTTAGGGCATTCGAGAGCCGATCAT---CGATG-TTGTTGGCATTTATC----TTTCCAGA-GCCCT---GGGCGTATTTGATTTC----TTT--ATACAATTCTCGAATATT-----GT-------A--CTT	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.............................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTAGGGCATTCGAGAGCC..................................................................................................................	22	1	2.00	2	0	2	0	0
..............................................................................................................................................................................................................................................................................................................................................................................ATTTAGTTGATAAGCTT-TTGGTTTAGT...........................................................................................................................................	27	1	1.00	1	0	0	1	0
.............................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTAGGGCATTCGAGA.....................................................................................................................	19	1	1.00	1	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................................GCTT-TTGGTTTAGTCAAAT......................................................................................................................................	19	1	1.00	1	0	0	1	0
.....................................................................................................................................................................................................................................................................................................................................................................................................TTAGTCAAATTGTTAGGGCATTCGA.......................................................................................................................	25	1	1.00	1	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---GGGCGTATTTGATTTC----T..........................................	18	1	1.00	1	1	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................TTGGTTTAGTCAAATTGTTAGGGC.............................................................................................................................	24	1	1.00	1	0	0	0	1
.....................................................................................................................................................................................................................................................................................................................AAAACAAAA--------CAAAAGAT---------------------AA-ACCCC-ACATT....................................................................................................................................................................	29	1	1.00	1	1	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAT---CGATG-TTGTTGGC...........................................................................................	19	1	1.00	1	0	0	1	0
.....................................................................................................................................................................................................................................................................................................................................................................................................TTAGTCAAATTGTTAGGGC.............................................................................................................................	19	1	1.00	1	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATC----TTTCCAGA-GCCCT---GGGC...........................................................	22	1	1.00	1	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................GTTTAGTCAAATTGTTAGG...............................................................................................................................	19	1	1.00	1	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................................................................................................CAAATTGTTAGGGCATTCGAG......................................................................................................................	21	1	1.00	1	0	1	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGAGAGCCGATCAT---CGATG-TTGTTGGC...........................................................................................	27	1	1.00	1	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................................................................C-ACATTTAGTTGATAAGCTT-TTGGTT...............................................................................................................................................	26	1	1.00	1	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................................................................AATTGTTAGGGCATTCGAGAGCC..................................................................................................................	23	1	1.00	1	0	0	1	0
.............................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTAGGGCATTCGAGAGC...................................................................................................................	21	1	1.00	1	0	1	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................TGTTAGGGCATTCGAGAGCC..................................................................................................................	20	1	1.00	1	0	0	1	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................C----TTTCCAGA-GCCCT---GGGC...........................................................	18	1	1.00	1	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................ATTTAGTTGATAAGCTT-TTGGT................................................................................................................................................	22	1	1.00	1	0	0	1	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT---GGGCGTATTTGATTTC----...........................................	18	1	1.00	1	0	0	0	1
..............................................................................................................................................................................................................................................................................................................................................................................................................................GAGCCGATCAT---CGATG-TTGTTGGC...........................................................................................	24	1	1.00	1	0	0	0	1
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGAGAGCCGATCAT---CGATG-TTGTT..............................................................................................	24	1	1.00	1	0	0	1	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAT---CGATG-TTGTTGGCATT........................................................................................	21	1	1.00	1	1	0	0	0
.......................................................................................................................GTAGATCTCCTCCGCCCAC------ATAATAGC.............................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	1	0	0	0

droYak3

---TCAT-------------------------------------AGGGAAGATGTT--AGATGAGCGTCGGTGAT-------GTGCGT--------------------------ATCGTGTAGATCTCCTCCGCCCAC------ATCATAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTT-TT--AATTTGAT--TAATC--------TCTTTGTTTCCTC----------------------------------------------------------------------------C---CAAACAAAA------------------------------AAAC---AAAA-CCC-ACATTTAGTTGATAAGCTT-TTGGTTTAGTCAAATTGTTAGGGCATTCGAGTGCCGATCAT---CGATG-TTGTTGGCATTTATC----TTTCCAGA-GCCCT---GGGCGTATTTGATTTC----TTT--ATACAATTCTCGAATATT-----GT-------A-----	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAT---CGATG-TTGTTGGC...........................................................................................	19	1	7.00	7	3	3	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTAGGGCATTCGAGTGCC..................................................................................................................	22	1	5.00	5	0	0	0	0	0	0	5	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................AATTGTTAGGGCATTCGAGTGCC..................................................................................................................	23	1	4.00	4	0	0	0	0	1	0	3	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................TGTTAGGGCATTCGAGTGCC..................................................................................................................	20	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................GTCAAATTGTTAGGGCATTCGAGTGCC..................................................................................................................	27	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................AAATTGTTAGGGCATTCGAGTGCC..................................................................................................................	24	1	2.00	2	0	0	1	0	0	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTATC----TTTCCAGA-GCCCC---...............................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
....................................................................................GCGT--------------------------ATCGTGTAGATCTCCT...................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.......................................................T--AGATGAGCGTCGGTGAT-------GTGCGT--------------------------ATC................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCAT---CGATG-TTGTTGGC...........................................................................................	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.....................................................GTT--AGATGAGCGTCGGTGAT-------GTGCGT--------------------------AT.................................................................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.....................................................................................................................................................................TTAATCTGGAATCAAATACGC...........................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................TCGAGTGCCGATCAT---CGATG-TTGTTGGC...........................................................................................	28	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTATC----TTTCCAGA-GCCCT---GGGC...........................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................GTAGATCTCCTCCGCCCAC------ATCATAGCT............................................................................................................................................................................................................................................................................................................................................................................................	28	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................GTTTAGTCAAATTGTTAGG...............................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATTTC----TTT--ATACAATTCTCGAAT.......................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAATTCTCGAATATT-----GT-------......	20	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCGTATTTGATTTC----TTT--ATACA.................................	24	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0
......................................................TT--AGATGAGCGTCGGTGAT-------GTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAT---CGATG-TTGTTGGCATTTATC----T...............................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTTGGCATTTATC----TTTCCAGA-GCCC...................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................GTT--AGATGAGCGTCGGTGAT-------G..................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.........................................................................................................................................................................................CTT-TT--AATTTGAT--TAATC--------TCTTT........................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGAGTGCCGATCAT---CGATG-TTGTTG.............................................................................................	28	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
........................................................................GAT-------GTGCGT--------------------------ATCGTGTAGAT........................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TC----TTT--ATACAATTCTCGAATATT-----G..............	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................TTAGTCAAATTGTTAGGGC.............................................................................................................................	19	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
.................................................AGATGTT--AGATGAGCGTCGGTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.............................................................TGAGCGTCGGTGAT-------GTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAT---CGATG-TTGTTGGCAT.........................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................CGAGTGCCGATCAT---CGATG-TTGTTGG............................................................................................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGAGTGCCGATCAT---CGATG-TTGTTGGC...........................................................................................	30	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................GTTTAGTCAAATTGTTAGGGC.............................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................TT-TTGGTTTAGTCAAATTGTTAGGGC.............................................................................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...........................................................GATGAGCGTCGGTGAT-------GTGCGT--------------------------ATC................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................TAGTCAAATTGTTAGGGC.............................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................AATTGTTAGGGCATTCGAGT.....................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
................................................AAGATGTT--AGATGAGCGTCGGTGAT-------G..................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTAGGGCATTCGAGTGTA..................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................TCAAATTGTTAGGGCATTCGA.......................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................AAGCTT-TTGGTTTAGTCAA........................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
....................................................TGTT--AGATGAGCGTCGGTGAT-------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................AGTCAAATTGTTAGGGCATTCGAGTGC...................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAT---CGATG-TTGTTGG............................................................................................	18	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................TTAGTCAAATTGTTAGGGCATTCGAGT.....................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTAGGGCATTCGAGT.....................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0

droEre2

---------------------------------------------------ATGTT--AGATGAGCGTCGGTGAT-------GTGCGT--------------------------ATCGTGTAGATCTCCTCCGCCCAC------ATCGTAGCTATATAATATGGTTTAATCTGGAATCAAATACGCTT-TT--AATTTGAT--TAATA--------TCTTTCTTCACACCC-----C---------------------------------------------------TC---------------CCAAAA--AAA-A----------------------------------------A-A-C-ACATTTAGTTGATAAGCTT-TTGGTTTAGTCAAATTGTTAGGGCATTCGAGTGCCGATCAT---CGATG-TTGTTGGCATTTATC----TTTCCAGA-GCCCT---GGGCGTATTTGATTTC----TTT--ATACAATTCTCGAATATT-----GT-------A-----	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.......................................................................TGAT-------GTGCGT--------------------------ATCGTGTAGATCTCC....................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	10.00	10	0	0	0	0	0	0	10
...................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAT---CGATG-TTGTTGGC...........................................................................................	19	1	5.00	5	0	1	0	1	3	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTAGGGCATTCGAGTGCC..................................................................................................................	22	1	4.00	4	0	0	0	0	4	0	0
.......................................................T--AGATGAGCGTCGGTGAT-------GTGCGT--------------------------A..................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	3.00	3	0	0	0	0	0	0	3
...................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAT---CGATG-TTGTTGG............................................................................................	18	1	3.00	3	0	0	0	2	0	1	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCAGA-GCCCT---GGGCGTATTTGAT..................................................	26	1	3.00	3	0	0	0	0	0	0	3
........................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGAGTGCCGATCAT---CG.......................................................................................................	19	1	1.00	1	0	0	0	1	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T---GGGCGTATTTGATTTC----TTT--ATACAA................................	26	1	1.00	1	1	0	0	0	0	0	0
.....................................................GTT--AGATGAGCGTCGGTGAT-------GT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................................ATTCGAGTGCCGATCAT---CGA......................................................................................................	20	1	1.00	1	0	0	0	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................................................TTGTTAGGGCATTCGAGTGCC..................................................................................................................	21	1	1.00	1	0	0	0	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................AATTGTTAGGGCATTCGAGTGCC..................................................................................................................	23	1	1.00	1	0	0	0	0	0	1	0
.............................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTAGGGCATTCGAGTGC...................................................................................................................	21	1	1.00	1	0	0	0	0	0	1	0
.............................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTAGGGCATTCGAGT.....................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0
...........................................................GATGAGCGTCGGTGAT-------GTGCGT--------------------------...................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1	0
.....................................................................................................................GTGTAGATCTCCTCCGCCCAC------AT...................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................TTTAGTCAAATTGTTAGGGC.............................................................................................................................	20	1	1.00	1	0	0	0	0	0	1	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TCAT---CGATG-TTGTTGGCATTTATC----TT..............................................................................	26	1	1.00	1	1	0	0	0	0	0	0
.......................................................................................................................GTAGATCTCCTCCGCCCAC------ATC..................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0	0
.....................................................GTT--AGATGAGCGTCGGTGAT-------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
........................................................................................................................................................................................................................................................................................................................................................................................................GTCAAATTGTTAGGGCATTCGAGTGCC..................................................................................................................	27	1	1.00	1	0	0	0	0	0	1	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACAATTCTCGAATATT-----G..............	19	1	1.00	1	1	0	0	0	0	0	0
...................................................ATGTT--AGATGAGCGTCGGTGAT-------GT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAT---CGATG-TTGTTGGCATTT.......................................................................................	23	1	1.00	1	0	0	0	0	0	1	0
.....................................................GTT--AGATGAGCGTCGGTGAT-------GTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGGCATTTATC----TTTCCAGA-GCCC...................................................................	26	1	1.00	1	1	0	0	0	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................GATCAT---CGATG-TTGTTGGCATT........................................................................................	22	1	1.00	1	0	0	0	0	1	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCAT---CGATG-TTGTTGGC...........................................................................................	20	1	1.00	1	0	0	0	1	0	0	0
....................................................TGTT--AGATGAGCGTCGGTGAT-------...................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................AAATTGTTAGGGCATTCGAGTGCC..................................................................................................................	24	1	1.00	1	0	0	0	0	1	0	0

dgr_293

scaffold_15110:5570649-5570799 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Repeatable elements

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-15.2	-15.1	-15.0