dgr_28

Antisense to pre_miRNA [Dgri\mir-iab-4-RM]; utr3 [utr3_minus_7917]; Antisense to miRNA [Dgri\miR-iab-4-3p-RB]; Antisense to miRNA [Dgri\miR-iab-4-5p-RA]

AAATTTATATATATACAAAACACATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGTTCTACAAGAGTGTCCTTTGGAGTGTCCCCCCGGTGT *********************************..((((....((((((.((((((((((((.((((.((....((......))..)))))).))))))))))))))))))....)))).....*********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M041 female body	V109 male body
..................................................TTACGTATACTGAAGGTAT............................................................................................	19	0	1	32.00	32	13	19
..................................................TTACGTATACTGAAGGTATA...........................................................................................	20	0	1	18.00	18	17	1
..................................................TTACGTATACTGAAGGTATAC..........................................................................................	21	0	1	15.00	15	15	0
..................................................TTACGTATACTGAAGGTATACC.........................................................................................	22	0	1	9.00	9	9	0
..................................................TTACGTATACTGAAGGTATACCGG.......................................................................................	24	0	1	4.00	4	4	0
...................................................TACGTATACTGAAGGTATACC.........................................................................................	21	0	1	4.00	4	4	0
...................................................TACGTATACTGAAGGTAT............................................................................................	18	0	1	3.00	3	3	0
...................................................TACGTATACTGAAGGTATA...........................................................................................	19	0	1	2.00	2	2	0
..................................................TTACGTATACTGAAGGTATACCGT.......................................................................................	24	1	1	2.00	2	1	1
...................................................TACGTATACTGAAGGTATAC..........................................................................................	20	0	1	2.00	2	2	0
..................................................TTCCGTATACTGAAGGTAT............................................................................................	19	1	1	1.00	1	0	1
..................................................TTACGTATACTGAAGGTTTA...........................................................................................	20	1	1	1.00	1	0	1
..................................................TTACGTATACTGAAGGTATCC..........................................................................................	21	1	1	1.00	1	0	1
..................................................TTACGTATACTGAAGGTCT............................................................................................	19	1	1	1.00	1	0	1
..................................................TTACGTATACTGAAGGTGT............................................................................................	19	1	1	1.00	1	0	1
................................................AATTACGTATACTGAAGGTAT............................................................................................	21	2	1	1.00	1	1	0
..................................................TTACGTATACTTAAGGTATA...........................................................................................	20	1	1	1.00	1	1	0
..................AACACATCCCGGGGCGCT.............................................................................................................................	18	3	20	0.15	3	0	3
..............................................................................GTTTCCCTCAGGATACATT................................................................	19	3	20	0.05	1	1	0

TTTAAATATATATATGTTTTGTGTAGGGCGCAACGACCACAAAGGAGCACAATGCATATGACTTCCATATGGCCTATCCTATGTGAGTCCTATGTAAGTCATATGCATATGCTTCAACGTGTCCAAGATGTTCTCACAGGAAACCTCACAGGGGGGCCACA *********************************..((((....((((((.((((((((((((.((((.((....((......))..)))))).))))))))))))))))))....)))).....*********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M041 female body
.....................................................................................AGTCCTATGTAAGTCATATGCA......................................................	22	0	1	145.00	145	145
......................................................................................GTCCTATGTAAGTCATATGCA......................................................	21	0	1	34.00	34	34
.....................................................................................AGTCCTATGTAAGTCATATGC.......................................................	21	0	1	13.00	13	13
......................................................................................GTCCTATGTAAGTCATATGC.......................................................	20	0	1	6.00	6	6
....................................................................................TAGTCCTATGTAAGTCATATGC.......................................................	22	1	1	5.00	5	5
.......................................................................................TCCTATGTAAGTCATATGCA......................................................	20	0	1	5.00	5	5
.....................................................GCATATGACTTCCATATGGC........................................................................................	20	0	1	2.00	2	2
...................................................................................TTAGTCCTATGTAAGTCATATGC.......................................................	23	1	1	2.00	2	2
...................................................................................TTAGTCCTATGTAAGTCATATG........................................................	22	1	1	2.00	2	2
................................................ACAATGCATATGACTTCCATAT...........................................................................................	22	0	1	1.00	1	1
.................................................CAATGCATATGACTTCCATATGG.........................................................................................	23	0	1	1.00	1	1
.....................................................................................TGTCCTATGTAAGTCATATGCA......................................................	22	1	1	1.00	1	1
...................................................................................TCAGTCCTATGTAAGTCATATGC.......................................................	23	1	1	1.00	1	1
......................................................................................GTCCTATGTAACTCATATGCA......................................................	21	1	1	1.00	1	1
...................................................................................TTTGTCCTATGTAAGTCATATGCA......................................................	24	2	1	1.00	1	1
..................................................................................ATAAGTCCTATGTAAGTCATATGCA......................................................	25	2	1	1.00	1	1
.......................................................................................TCCTATGTAAGTCATATGC.......................................................	19	0	1	1.00	1	1
.................................................................................AGTGAGTCCTATGTAAGTCATATGCA......................................................	26	1	1	1.00	1	1
.....................................................................................AGTCCTATGTAAGTCATGTGCA......................................................	22	1	1	1.00	1	1
.....................................................................................AGTCCTATGTAAGTCATATG........................................................	20	0	1	1.00	1	1
....................................................................................TAGTCCTATGTAAGTCATATGCA......................................................	23	1	1	1.00	1	1
........................................................................................CCTATGTAAGTCATATGCA......................................................	19	0	1	1.00	1	1
.................................................CGATGCATATGACTTCCATATGGC........................................................................................	24	1	1	1.00	1	1
.....................................................................................AGTCCTATCTAAGTCATATGCA......................................................	22	1	1	1.00	1	1
...................................................................................AAAGTCCTATGTAAGTCATAT.........................................................	21	2	2	0.50	1	1

Species	Coordinate	ID	Type	Alignment
droGri2	scaffold_14906:12815071-12815231 -	dgr_28	candidate-rescued	AAATTTATATATA----TACAAAA--CACATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGTTC------------------TAC---AAGAGTGTCCTTTGG----A------------------G--TGT-----------CCCCCCGGTGT------------------------
droVir3	scaffold_12855:414665-414807 +	dvi-mir-iab-8	Known_mirbase	CAATCTAAA--------TATATCA--CACATCCCGCGTCGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGCTCTACAA--------------------TAAGTG----CT------------------------------C----------------CGCTAT------------------------
droMoj3	scaffold_6540:1943707-1943845 -	dmo_140	confident	AAGTT-----------------TTCACACATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGCTCAACAATTCGCTCCT------G---AAAAGTG----------------------------------------------------------T------------------------
droWil2	scf2_1100000004943:4905574-4905707 +	dwi_203	confident	A-------------------------CACATCCCGCGTTGTTGGTGTTTCATCGTGTTACGTATACTGAAGGTATACCGGATAGCATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGATTCAT---------CT-------G---GAAAGTG----AC--------------------------------------CGGTAC--CCGGTG-------------------------
dp5	2:17671696-17671860 -	dps-mir-iab-8	Known_mirbase	A-------------------------CGTATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTCGCACAGGTTCAT---------CCT--A---C---ATAACCG----CTGAAAGAA------------AATTACGAGTGCAGTCGAAAGGATCCGCAGATGT------------------------
droPer2	scaffold_0:11526502-11526678 -	dpe_160	candidate-rescued	AAATTCA-------------GTTCGACATATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTCGCACAGGTTCAT---------CCT--A---C---ATAACCG----CTGAAAGAA------------AATTACGAATGCAGTCGAAAGGATCCGCAGATGT------------------------
droAna3	scaffold_13340:7215178-7215312 +	dan_56	confident	--------------------------CACGTCCCGCGTTGAAGGTGTTACCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAAAATCAC---------CAT--CCTCC---GTAA------------------------------------------------TGTTCTAGTGCTGC------------------------
droBip1	scf7180000396708:1638841-1638998 -			AAATATTTCTAAAACAAAGT-TTT--CACGTCCCGCGTTGAAAGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAAAATCAC---------CAT--CCATC---GTAATTT------------------------------------------------TCTGGTAAGAT------------------------
droKik1	scf7180000302313:151126-151282 -			--------------------------CACATCCCGCGTTGCTTGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGAGTCAT---------CAT--CATCC---GCAAGTG----CTTA----TAAAGGACACGAAAAAGGA--------CTG----------CAGTTGC------------------------
droFic1	scf7180000452523:122300-122470 -			--------------------------CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACACAATCAC---------TATGAAATCCGGCGAAAGTGA---CTGA----A------------A--GACG--TGTCGCTG--CAGTTC--GTGATGCAG------------ATTGAGAT--
droEle1	scf7180000486474:1729403-1729545 -			--------------------------CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCAC---------CAT--AATCC---GAAAGTG----AC--------------------------------GATG--CAGTTG--CAGATGC------------------------
droRho1	scf7180000759657:23941-24097 -			--------------------------CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCAC---------CAT--AATCC---GAAAGTG----CCAA----A------------CAGGATG--CGTCGCTG--CAGTTG--CAGATGA------------------------
droBia1	scf7180000299102:622741-622885 -			--------------------------CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCAC---------CAT--AATCC---AAAAGTG----CCGA----G------------AAAGATG--CGC----------------CGCTGC------------------------
droTak1	scf7180000411269:86527-86706 -			AGTTTTAAA--AAGAAAAGTGTTT--CACATCCCACGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCAC---------CAT--AATCC---AAAAGTG----CCAA----AG-----------AAGGATG--CGCCGCTG--CAGTTC--CAGGTGC------------------------
droEug1	scf7180000409804:92840-93024 -			TAAAC--------------TGTTT--CACATCCCACGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACACAATCAC---------TAT--AATCC---GAAAGTG----ACCA----A------------AATGAAG--T------G--CAGTTC--CAGATGCAGCCAAGCGATGAAATCCAGATTT
dm3	chr3R:12681933-12682099 -	dme-mir-iab-8	Known_mirbase	AAA--------------AGTGTTT--CACATCCCACGTTGTTAGTGCTCTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGC---------CAT--TATTC---AAAAGTG----CTGA----A------------AATTATG--CGTCGTCG--CGGATC--CAAATGC------------------------
droSim2	3r:8574090-8574246 +	dsi-mir-iab-8	Known_mirbase	--------------------------CACATCCCACGTTGCTCGTGCTATCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGC---------CAT--TATCC---AAAAGTG----CTGA----A------------AATTATG--CCGTGTCG--CGGATC--TAGATGC------------------------
droSec2	scaffold_12:1472200-1472376 +	dse_312	confident	AGATGTATTAAAA----AGTGTTT--CACATCCCACGTTGCTCGTGCTATCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGC---------CAT--TATCC---AAAAGTG----CTGA----A------------AATTATG--CCGTGTCG--CGGATC--TAGATGC------------------------
droYak3	3R:11708943-11709099 +	dya_90	confident	--------------------------CACATCCCACGTTGCTCGTGCTTTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGC---------CTT--AGTCC---AAAAGTG----CTGA----A------------AATTACG--CGTCGTCG--CGGATC--GAGATGT------------------------
droEre2	scaffold_4770:8952392-8952548 +	der_113	confident	--------------------------CACATCCCACGTTGCTCGTGCTTTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGC---------CTT--AATCC---AAAAGTG----CTGA----A------------AATTATA--CGTCGTCG--CGGATC--CAGATGC------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droGri2

AAATTTATATATA----TACAAAA--CACATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGTTC------------------TAC---AAGAGTGTCCTTTGG----A------------------G--TGT-----------CCCCCCGGTGT------------------------	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
........................................................TTACGTATACTGAAGGTAT............................................................................................................................................................................	19	1	32.00	32	13	19
........................................................TTACGTATACTGAAGGTATA...........................................................................................................................................................................	20	1	18.00	18	17	1
........................................................TTACGTATACTGAAGGTATAC..........................................................................................................................................................................	21	1	15.00	15	15	0
........................................................TTACGTATACTGAAGGTATACC.........................................................................................................................................................................	22	1	9.00	9	9	0
........................................................TTACGTATACTGAAGGTATACCGG.......................................................................................................................................................................	24	1	4.00	4	4	0
.........................................................TACGTATACTGAAGGTATACC.........................................................................................................................................................................	21	1	4.00	4	4	0
.........................................................TACGTATACTGAAGGTAT............................................................................................................................................................................	18	1	3.00	3	3	0
.........................................................TACGTATACTGAAGGTATA...........................................................................................................................................................................	19	1	2.00	2	2	0
........................................................TTACGTATACTGAAGGTATACCGT.......................................................................................................................................................................	24	1	2.00	2	1	1
.........................................................TACGTATACTGAAGGTATAC..........................................................................................................................................................................	20	1	2.00	2	2	0

droVir3

CAATCTAAA--------TATATCA--CACATCCCGCGTCGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGCTCTACAA--------------------TAAGTG----CT------------------------------C----------------CGCTAT------------------------	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells	SRR2096013 Ovary_Strain_9_oxidized	SRR2096014 Ovary_Strain_160_oxidized	SRR2096026 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096038 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096050 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096055 Ovary_Min_43	SRR2096056 Ovary_Min_46	SRR2096057 Ovary_Min_50	SRR2096058 Ovary_Min_98	SRR2096059 Ovary_Min_164	SRR2096060 Ovary_Min_193	SRR2096061 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096072 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096079 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096080 embryo_0-2h from 15to16 day old nondysgenic mothers	SRR2096081 embryo_0-2h from 15to16 day old nondysgenic mothers
........................................................TTACGTATACTGAAGGTAT............................................................................................................................................................................	19	1	1125.00	1125	1	1	110	0	0	121	12	51	3	91	0	0	0	0	1	0	1	1	1	0	69	2	6	4	2	2	1	2	52	119	31	90	0	148	0	0	0	0	1	120	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	78	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACC.........................................................................................................................................................................	22	1	694.00	694	1	0	205	54	0	6	0	5	0	4	0	0	0	0	4	1	3	0	1	0	3	2	8	0	1	0	2	1	120	62	37	117	0	4	0	0	0	0	0	49	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGG.......................................................................................................................................................................	24	1	635.00	635	0	0	23	2	0	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	170	86	58	242	0	5	0	1	0	0	0	24	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATAC..........................................................................................................................................................................	21	1	530.00	530	0	0	201	5	0	2	0	1	0	1	0	0	0	0	3	1	0	2	1	0	3	1	6	0	0	0	2	3	80	72	24	85	0	2	0	0	0	0	0	32	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATA...........................................................................................................................................................................	20	1	344.00	344	0	0	67	1	0	7	2	38	0	15	0	0	0	0	1	1	0	1	0	0	5	1	1	0	0	0	0	0	54	50	18	62	0	2	0	0	0	0	0	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0
........................................................TTACGTATACTGAAGGTATACCG........................................................................................................................................................................	23	1	306.00	306	1	0	13	2	0	9	0	1	0	1	0	0	0	0	0	1	1	0	1	0	2	0	15	0	0	0	0	0	69	40	15	83	0	7	0	0	0	0	1	43	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGGT......................................................................................................................................................................	25	1	149.00	149	0	0	0	0	1	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	31	17	13	58	0	7	0	0	0	0	0	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATAA..........................................................................................................................................................................	21	1	121.00	121	0	0	2	0	0	9	0	1	0	4	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	1	0	13	31	6	27	0	10	0	0	1	0	0	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................AGGATACATTCAGTATACGT......................................................................................................................................	20	1	90.00	90	0	0	0	0	0	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	1	0	0	0	0	0	0	15	21	5	17	0	7	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................AGGATACATTCAGTATACGTA.....................................................................................................................................	21	1	81.00	81	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	16	25	8	24	0	2	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGGA......................................................................................................................................................................	25	1	68.00	68	0	0	2	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	18	17	5	13	0	1	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGT.......................................................................................................................................................................	24	1	40.00	40	0	0	1	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	3	1	5	0	2	0	0	0	0	0	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................AGGATACATTCAGTATACGTAT....................................................................................................................................	22	1	25.00	25	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	8	2	6	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................AGGATACATTCAGTATACGTATA...................................................................................................................................	23	1	23.00	23	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	6	0	6	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................GGATACATTCAGTATACGTATA...................................................................................................................................	22	1	21.00	21	0	0	5	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	4	1	4	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................CGTATACTGAAGGTATACCGGA......................................................................................................................................................................	22	1	16.00	16	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	6	3	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................TACGTATACTGAAGGTATAC..........................................................................................................................................................................	20	1	16.00	16	0	0	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................TACGTATACTGAAGGTATACC.........................................................................................................................................................................	21	1	15.00	15	0	0	14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGGATAGGATACACT...........................................................................................................................................................	36	1	14.00	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	3	0	2	0	0	0	2	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGGATAGGATACACTC..........................................................................................................................................................	37	1	13.00	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	1	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCC........................................................................................................................................................................	23	1	8.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	3	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATAAA.........................................................................................................................................................................	22	1	8.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	1	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................AGGATACATTCAGTATACGTAA....................................................................................................................................	22	1	8.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................ACGTATACTGAAGGTATACCGG.......................................................................................................................................................................	22	1	7.00	7	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTA.............................................................................................................................................................................	18	1	7.00	7	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACA.........................................................................................................................................................................	22	1	7.00	7	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................TACGTATACTGAAGGTAT............................................................................................................................................................................	18	1	6.00	6	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATAT..........................................................................................................................................................................	21	1	6.00	6	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................GGATACATTCAGTATACGTAT....................................................................................................................................	21	1	5.00	5	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGGTA.....................................................................................................................................................................	26	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGGAA.....................................................................................................................................................................	26	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTAA............................................................................................................................................................................	19	1	4.00	4	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................AGGATACATTCAGTATACG.......................................................................................................................................	19	1	4.00	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTAC............................................................................................................................................................................	19	1	3.00	3	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................TGTTACGTATACTGAAGGTAT............................................................................................................................................................................	21	1	3.00	3	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................ACGTATACTGAAGGTATACCGGA......................................................................................................................................................................	23	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATC...........................................................................................................................................................................	20	1	3.00	3	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................CGCTGGTGTTTCCTCGTG...............................................................................................................................................................................................	18	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................ATACTGAAGGTATACCGG.......................................................................................................................................................................	18	1	3.00	3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................CGTATACTGAAGGTATACCGG.......................................................................................................................................................................	21	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................ATCCCGCGTCGCTGGTGTTTCCTCGTG...............................................................................................................................................................................................	27	1	2.00	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATAAAA........................................................................................................................................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................CAGGATACATTCAGTATACGTA.....................................................................................................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................TCAGGATACATTCAGTATACGTATA...................................................................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................GTCGCTGGTGTTTCCTCGTG...............................................................................................................................................................................................	20	1	2.00	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACT.........................................................................................................................................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................CCCGCGTCGCTGGTGTTTCCTCGTG...............................................................................................................................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................AGGATACATTCAGTATACGTT.....................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................GTTACGTATACTGAAGGTAT............................................................................................................................................................................	20	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................TACGTATACTGAAGGTATA...........................................................................................................................................................................	19	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....TAAA--------TATATCA--CACATCCCGC...................................................................................................................................................................................................................	21	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................GATACATTCAGTATACGTAT....................................................................................................................................	20	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................GATACATTCAGTATACGTATAA..................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................AGGATACATTCAGTATACGTG.....................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................CAGGATACATTCAGTATACGTAT....................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGGCA.....................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................ACGTATACTGAAGGTATACCGGT......................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCAA.......................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGGATAGGATACACTCT.........................................................................................................................................................	38	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................GGATACATTCAGTATACGTA.....................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................CGTCGCTGGTGTTTCCTCGTG...............................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................TACGTATACTGAAGGTATACCGG.......................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGGG......................................................................................................................................................................	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGGATAGGATACA.............................................................................................................................................................	34	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................TCAGGATACATTCAGTATACGT......................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTT.............................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................GTTACGTATACTGAAGGTATA...........................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGGAT.....................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGGTC.....................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................GTCGCTGGTGTTTCCTCGTA...............................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATT...........................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCT........................................................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGGAG.....................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................ACGTATACTGAAGGTATACCGT.......................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................GGATACATTCAGTATACGTATAA..................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................AGGATACATTCAGTATACGTC.....................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................TACGTATACTGAAGGTATACCG........................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................TACGTATACTGAAGGTATACCGGT......................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGTC......................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................GGATACATTCAGTATACGTAA....................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................GGATACATTCAGTATACGT......................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................GATACATTCAGTATACGTATAT..................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATATA.........................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

AAGTT-----------------TTCACACATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGGCTCAACAATTCGCTCCT------G---AAAAGTG----------------------------------------------------------T------------------------	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
........................................................TTACGTATACTGAAGGTATACC.........................................................................................................................................................................	22	1	891.00	891	215	11	0	1	655	9
........................................................TTACGTATACTGAAGGTAT............................................................................................................................................................................	19	1	603.00	603	160	0	6	8	2	427
........................................................TTACGTATACTGAAGGTATAC..........................................................................................................................................................................	21	1	595.00	595	465	4	0	0	117	9
........................................................TTACGTATACTGAAGGTATA...........................................................................................................................................................................	20	1	147.00	147	107	3	0	0	15	22
........................................................TTACGTATACTGAAGGTATACCGG.......................................................................................................................................................................	24	1	104.00	104	66	6	0	1	27	4
..............................................................................................GGATACATTCAGTATACGTATA...................................................................................................................................	22	1	92.00	92	4	0	0	0	88	0
.........................................................TACGTATACTGAAGGTATAC..........................................................................................................................................................................	20	1	54.00	54	49	0	0	0	5	0
........................................................TTACGTATACTGAAGGTATACCG........................................................................................................................................................................	23	1	33.00	33	25	1	0	1	3	3
.............................................................................................AGGATACATTCAGTATACGTATA...................................................................................................................................	23	1	23.00	23	1	0	0	0	22	0
........................................................TTACGTATACTGAAGGTATACCGT.......................................................................................................................................................................	24	1	16.00	16	1	0	0	0	5	10
.........................................................TACGTATACTGAAGGTATACC.........................................................................................................................................................................	21	1	16.00	16	15	0	0	0	1	0
.............................................................................................AGGATACATTCAGTATACGTA.....................................................................................................................................	21	1	11.00	11	0	2	0	0	9	0
........................................................TTACGTATACTGAAGGTATACCGGT......................................................................................................................................................................	25	1	10.00	10	2	0	0	0	1	7
.........................................................TACGTATACTGAAGGTATA...........................................................................................................................................................................	19	1	8.00	8	8	0	0	0	0	0
.........................................................TACGTATACTGAAGGTAT............................................................................................................................................................................	18	1	8.00	8	8	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGGA......................................................................................................................................................................	25	1	7.00	7	3	1	0	0	1	2
.........................................................TACGTATACTGAAGGTATACCGG.......................................................................................................................................................................	23	1	5.00	5	5	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATAA..........................................................................................................................................................................	21	1	4.00	4	1	0	0	1	0	2
...........................................................CGTATACTGAAGGTATACCGGA......................................................................................................................................................................	22	1	4.00	4	0	1	0	0	3	0
...............................................................................................GATACATTCAGTATACGTATAC..................................................................................................................................	22	1	4.00	4	0	0	0	0	4	0
........................................................TTACGTATACTGAAGGTATACA.........................................................................................................................................................................	22	1	3.00	3	1	0	0	0	2	0
.............................................................................................AGGATACATTCAGTATACGT......................................................................................................................................	20	1	3.00	3	1	0	0	0	0	2
..............................................................................................GGATACATTCAGTATACGTAT....................................................................................................................................	21	1	2.00	2	2	0	0	0	0	0
...............................................................................................GATACATTCAGTATACGTATA...................................................................................................................................	21	1	2.00	2	1	0	0	0	1	0
.............................................................................................AGGATACATTCAGTATACGTAT....................................................................................................................................	22	1	2.00	2	2	0	0	0	0	0
..............................................................................................GGATACATTCAGTATACGTAC....................................................................................................................................	21	1	2.00	2	0	0	0	0	2	0
........................................................TTACGTATACTGAAGGTAC............................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1
..........................................................ACGTATACTGAAGGTATA...........................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACG.........................................................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0
............................................................GTATACTGAAGGTATACC.........................................................................................................................................................................	18	1	1.00	1	0	0	0	0	1	0
........................................................TTACGTATACTGAAGGTATAT..........................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
..............................................................................................GGATACATTCAGTATACGTATT...................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0
........................................................TTACGTATACTGAAGGTATACCGGTA.....................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0
...............................................................................GATAGGATACACTCAGGATACATTCAGT............................................................................................................................................	28	1	1.00	1	0	0	0	0	0	1
..........................................................ACGTATACTGAAGGTATACCGG.......................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
.......................................................GTTACGTATACTGAAGGTATAC..........................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
................................................................................ATAGGATACACTCAGGAT.....................................................................................................................................................	18	1	1.00	1	0	0	1	0	0	0
........................................................TTACGTATACTGAAGGTTC............................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1
..............................................................................................GGATACATTCAGTATACGT......................................................................................................................................	19	1	1.00	1	1	0	0	0	0	0
...............................................................................................GATACATTCAGTATACGTATAA..................................................................................................................................	22	1	1.00	1	0	0	0	0	1	0
..........................................................................................CTCAGGATACATTCAGTA...........................................................................................................................................	18	1	1.00	1	0	0	0	0	0	1
..............................................................ATACTGAAGGTATACCGGT......................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1
...............................CCCGCGTTGCTGGTGTTTCCTCGTG...............................................................................................................................................................................................	25	1	1.00	1	0	0	0	0	1	0
..........................................................................................CTCAGGATACATTCAGTATACGTATA...................................................................................................................................	26	1	1.00	1	0	0	0	0	0	1
...............................................................................................GATACATTCAGTATACGTAT....................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
.........................................................................ATACCGGATAGGATACACTCAGGAT.....................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	1
......................................................TGTTACGTATACTGAAGGTAT............................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1
........................................................TTACGTATACTGAAGGTATACCT........................................................................................................................................................................	23	1	1.00	1	0	0	0	0	1	0
...............................................................................GATAGGATACACTCAGGATAC...................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
........................................................TTACGTATACTGAAGGTA.............................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0
.........................................................TACGTATACTGAAGGTATACCG........................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
....................................................CGTGTTACGTATACTGAAGGTATAC..........................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0

droWil2

A-------------------------CACATCCCGCGTTGTTGGTGTTTCATCGTGTTACGTATACTGAAGGTATACCGGATAGCATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGATTCAT---------CT-------G---GAAAGTG----AC--------------------------------------CGGTAC--CCGGTG-------------------------	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
........................................................TTACGTATACTGAAGGTAT............................................................................................................................................................................	19	1	236.00	236	1	128	67	23	17
........................................................TTACGTATACTGAAGGTATAC..........................................................................................................................................................................	21	1	224.00	224	1	177	1	43	2
........................................................TTACGTATACTGAAGGTATA...........................................................................................................................................................................	20	1	135.00	135	0	77	6	44	8
........................................................TTACGTATACTGAAGGTATACCGG.......................................................................................................................................................................	24	1	87.00	87	0	58	0	29	0
........................................................TTACGTATACTGAAGGTATACC.........................................................................................................................................................................	22	1	66.00	66	0	41	1	22	2
........................................................TTACGTATACTGAAGGTATACCG........................................................................................................................................................................	23	1	24.00	24	0	17	0	7	0
.............................................................................................AGGATACATTCAGTATACGTA.....................................................................................................................................	21	1	16.00	16	0	4	0	10	2
........................................................TTACGTATACTGAAGGTATACCGGA......................................................................................................................................................................	25	1	14.00	14	0	4	1	9	0
...........................................................CGTATACTGAAGGTATACCGGA......................................................................................................................................................................	22	1	13.00	13	1	1	0	11	0
.........................................................TACGTATACTGAAGGTAT............................................................................................................................................................................	18	1	13.00	13	0	13	0	0	0
.........................................................TACGTATACTGAAGGTATAC..........................................................................................................................................................................	20	1	11.00	11	0	11	0	0	0
.....................................TTGTTGGTGTTTCATCGTG...............................................................................................................................................................................................	19	1	10.00	10	0	0	0	10	0
.............................................................................................AGGATACATTCAGTATACGT......................................................................................................................................	20	1	9.00	9	0	4	3	2	0
.........................................................TACGTATACTGAAGGTATA...........................................................................................................................................................................	19	1	9.00	9	0	9	0	0	0
.........................................................TACGTATACTGAAGGTATACCGG.......................................................................................................................................................................	23	1	9.00	9	0	9	0	0	0
.............................................................................................AGGATACATTCAGTATACGTAT....................................................................................................................................	22	1	6.00	6	0	4	0	2	0
........................................................TTACGTATACTGAAGGTATACCGGT......................................................................................................................................................................	25	1	4.00	4	0	1	0	3	0
.............................................................................................AGGATACATTCAGTATACGTATA...................................................................................................................................	23	1	3.00	3	0	1	0	2	0
.........................................................TACGTATACTGAAGGTATACC.........................................................................................................................................................................	21	1	2.00	2	0	2	0	0	0
........................................................TTACGTATACTGAAGGTATACA.........................................................................................................................................................................	22	1	2.00	2	0	2	0	0	0
..............................................................................................GGATACATTCAGTATACGTAT....................................................................................................................................	21	1	2.00	2	0	2	0	0	0
........................................................TTACGTATACTGAAGGTATACCGT.......................................................................................................................................................................	24	1	2.00	2	0	1	0	1	0
.......................................................GTTACGTATACTGAAGGTATAC..........................................................................................................................................................................	22	1	2.00	2	0	2	0	0	0
...................................CGTTGTTGGTGTTTCATCGTG...............................................................................................................................................................................................	21	1	2.00	2	0	0	0	2	0
........................................................TTACGTATACTGAAGGTATT...........................................................................................................................................................................	20	1	2.00	2	0	2	0	0	0
......................................................TGTTACGTATACTGAAGGTAT............................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0
........................................................TTACGTATACTGAAGGTA.............................................................................................................................................................................	18	1	1.00	1	0	0	0	1	0
.........................................................TACGTATACTGAAGGTATACCGGT......................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0
........................................................TTACGTATACTGAAGGTATAA..........................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0
.............................ATCCCGCGTTGTTGGTGTTTCATCGTG...............................................................................................................................................................................................	27	1	1.00	1	0	0	0	1	0
..........................................................ACGTATACTGAAGGTATAC..........................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0
.........................................................TACGTATACTGAAGGTATACCG........................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0
........................................................TTACGTATACTGAAGGTATACG.........................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0
........................................................TTACGTATACTGAAGGTATACCGGTA.....................................................................................................................................................................	26	1	1.00	1	0	1	0	0	0
................................................................................................ATACATTCAGTATACGTATACG.................................................................................................................................	22	1	1.00	1	0	0	0	1	0
..........................................................ACGTATACTGAAGGTATA...........................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0
.........................................................TACGTATACTGAAGGTATACA.........................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0
.............................................................................................AGGATACATTCAGTATACGTC.....................................................................................................................................	21	1	1.00	1	0	1	0	0	0
.............................................................................................AGGATACATTCAGTATACGTATAA..................................................................................................................................	24	1	1.00	1	0	1	0	0	0
.........................................................................................ACTCAGGATACATTCAGT............................................................................................................................................	18	1	1.00	1	0	0	1	0	0
.........................................................TACGTATACTGAAGGTATACCGGA......................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0
...............................CCCGCGTTGTTGGTGTTTCATCGTG...............................................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0

dp5

A-------------------------CGTATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTCGCACAGGTTCAT---------CCT--A---C---ATAACCG----CTGAAAGAA------------AATTACGAGTGCAGTCGAAAGGATCCGCAGATGT------------------------	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
........................................................TTACGTATACTGAAGGTATAC..........................................................................................................................................................................	21	1	736.00	736	0	611	56	28	15	6	9	0	11	0
........................................................TTACGTATACTGAAGGTAT............................................................................................................................................................................	19	1	390.00	390	1	241	0	1	5	37	99	0	6	0
........................................................TTACGTATACTGAAGGTATA...........................................................................................................................................................................	20	1	370.00	370	0	299	6	10	37	3	11	0	4	0
........................................................TTACGTATACTGAAGGTATACC.........................................................................................................................................................................	22	1	326.00	326	0	105	157	35	15	5	2	0	7	0
........................................................TTACGTATACTGAAGGTATACCGG.......................................................................................................................................................................	24	1	183.00	183	0	48	4	0	3	1	0	0	124	3
.........................................................TACGTATACTGAAGGTATAC..........................................................................................................................................................................	20	1	32.00	32	0	31	1	0	0	0	0	0	0	0
.........................................................TACGTATACTGAAGGTATA...........................................................................................................................................................................	19	1	30.00	30	0	30	0	0	0	0	0	0	0	0
.........................................................TACGTATACTGAAGGTAT............................................................................................................................................................................	18	1	28.00	28	0	28	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCG........................................................................................................................................................................	23	1	20.00	20	0	12	1	0	1	0	0	0	6	0
........................................................TTACGTATACTGAAGGTATACCGGA......................................................................................................................................................................	25	1	15.00	15	0	7	0	0	1	1	2	0	4	0
.............................................................................................AGGATACATTCAGTATACGTATA...................................................................................................................................	23	1	11.00	11	0	0	8	0	2	0	0	0	1	0
.........................................................TACGTATACTGAAGGTATACC.........................................................................................................................................................................	21	1	11.00	11	0	11	0	0	0	0	0	0	0	0
..............................................................................................GGATACATTCAGTATACGTATA...................................................................................................................................	22	1	6.00	6	0	0	6	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGGT......................................................................................................................................................................	25	1	6.00	6	0	2	0	0	0	0	2	0	2	0
...........................................................CGTATACTGAAGGTATACCGGA......................................................................................................................................................................	22	1	5.00	5	0	2	0	0	3	0	0	0	0	0
.............................................................................................AGGATACATTCAGTATACGTA.....................................................................................................................................	21	1	4.00	4	0	1	3	0	0	0	0	0	0	0
.............................................................................................AGGATACATTCAGTATACGTAT....................................................................................................................................	22	1	4.00	4	0	3	1	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATT...........................................................................................................................................................................	20	1	4.00	4	0	0	0	0	0	0	4	0	0	0
........................................................TTACGTATACTGAAGGTATACA.........................................................................................................................................................................	22	1	4.00	4	0	2	1	0	0	0	0	0	1	0
.........................................................TACGTATACTGAAGGTATACCGG.......................................................................................................................................................................	23	1	4.00	4	0	4	0	0	0	0	0	0	0	0
..........................................................ACGTATACTGAAGGTATAC..........................................................................................................................................................................	19	1	3.00	3	0	3	0	0	0	0	0	0	0	0
.............................................................................................AGGATACATTCAGTATACGT......................................................................................................................................	20	1	3.00	3	0	0	0	0	0	0	2	0	1	0
........................................................TTACGTATACTGAAGGTATACCGT.......................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	1	0	1	0
........................................................TTACGTATACTGAAGGTATAA..........................................................................................................................................................................	21	1	2.00	2	0	2	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTA.............................................................................................................................................................................	18	1	2.00	2	0	1	0	0	1	0	0	0	0	0
.................................................................................................TACATTCAGTATACGTATACGT................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	1	0	0	0
...............................................................................................GATACATTCAGTATACGTATAC..................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0
..........................................................ACGTATACTGAAGGTATACCGG.......................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.................................................................................................TACATTCAGTATACGTATA...................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTTA............................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	1	0	0	0
........................................................TTACGTATACTGAAGGTATTA..........................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0	0	0	0
......................................................TGTTACGTATACTGAAGGTAT............................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0
........................................................TTACGTATACTGAAGGTATACT.........................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	1	0
........................................................TTACGTATACTGAAGGTATTT..........................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0
.............................................................................................AGGATACATTCAGTATACGTATAC..................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0
..............................................................................................................................................................................GAA------------AATTACGAGTGCAGTCGAAAGGA...................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0
..........................................................ACGTATACTGAAGGTATACCG........................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...........................................................CGTATACTGAAGGTATACCGG.......................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0
.........................................................TACGTATACTGAAGGTATACA.........................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0	0	0	0

droPer2

AAATTCA-------------GTTCGACATATCCCGCGTTGCTGGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTCGCACAGGTTCAT---------CCT--A---C---ATAACCG----CTGAAAGAA------------AATTACGAATGCAGTCGAAAGGATCCGCAGATGT------------------------	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
........................................................TTACGTATACTGAAGGTAT............................................................................................................................................................................	19	1	543.00	543	0	25	5	6	2	505
........................................................TTACGTATACTGAAGGTATA...........................................................................................................................................................................	20	1	64.00	64	0	15	19	1	1	28
........................................................TTACGTATACTGAAGGTATAC..........................................................................................................................................................................	21	1	46.00	46	0	39	3	0	0	4
........................................................TTACGTATACTGAAGGTATACC.........................................................................................................................................................................	22	1	24.00	24	2	19	2	0	0	1
........................................................TTACGTATACTGAAGGTATACCGG.......................................................................................................................................................................	24	1	11.00	11	0	8	1	0	0	2
........................................................TTACGTATACTGAAGGTATT...........................................................................................................................................................................	20	1	10.00	10	0	1	0	0	0	9
.........................................................TACGTATACTGAAGGTATACCGG.......................................................................................................................................................................	23	1	2.00	2	0	2	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGT.......................................................................................................................................................................	24	1	2.00	2	0	0	0	0	0	2
.........................................................TACGTATACTGAAGGTATACC.........................................................................................................................................................................	21	1	2.00	2	0	2	0	0	0	0
........................................................TTACGTATACTGAAGGTTA............................................................................................................................................................................	19	1	2.00	2	0	0	0	0	0	2
........................................................TTACGTATACTGAAGGTATACT.........................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1
.........................................................TACGTATACTGAAGGTATACCG........................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
.........................................................TACGTATACTGAAGGTATAC..........................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0
........................................................TTACGTATACTGAAGGTATAA..........................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1
...........................................................CGTATACTGAAGGTATACCGG.......................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGGT......................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	1
..............................................................................................GGATACATTCAGTATACGTATA...................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
.............................................................................................AGGATACATTCAGTATACGT......................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1
.........................................................TACGTATACTGAAGGTATA...........................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0
.........................................................TACGTATACTGAAGGTATACCGGA......................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0
........................................................TTACGTATACTGAAGGTAA............................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	1
.............................ATCCCGCGTTGCTGGTGTTTCCTCGTG...............................................................................................................................................................................................	27	1	1.00	1	1	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATAT..........................................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0
.........................................................TACGTATACTGAAGGTAT............................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCG........................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0

droAna3

--------------------------CACGTCCCGCGTTGAAGGTGTTACCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAAAATCAC---------CAT--CCTCC---GTAA------------------------------------------------TGTTCTAGTGCTGC------------------------	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
........................................................TTACGTATACTGAAGGTAT............................................................................................................................................................................	19	1	232.00	232	44	0	0	10	153	25
........................................................TTACGTATACTGAAGGTATACC.........................................................................................................................................................................	22	1	89.00	89	29	44	2	5	3	6
........................................................TTACGTATACTGAAGGTATACCGG.......................................................................................................................................................................	24	1	47.00	47	33	3	0	3	0	8
........................................................TTACGTATACTGAAGGTATA...........................................................................................................................................................................	20	1	45.00	45	25	4	0	0	8	8
........................................................TTACGTATACTGAAGGTATAC..........................................................................................................................................................................	21	1	29.00	29	20	7	0	0	2	0
........................................................TTACGTATACTGAAGGTATACCGT.......................................................................................................................................................................	24	1	19.00	19	3	0	0	0	12	4
......................................................TGTTACGTATACTGAAGGTAT............................................................................................................................................................................	21	1	18.00	18	3	0	0	1	11	3
........................................................TTACGTATACTGAAGGTATACCGGT......................................................................................................................................................................	25	1	11.00	11	3	0	0	1	3	4
........................................................TTACGTATACTGAAGGTATACCG........................................................................................................................................................................	23	1	10.00	10	6	0	0	0	3	1
.................................................................................................TACATTCAGTATACGTATACGT................................................................................................................................	22	1	6.00	6	0	0	0	0	6	0
.........................................................TACGTATACTGAAGGTAT............................................................................................................................................................................	18	1	4.00	4	4	0	0	0	0	0
.........................................................TACGTATACTGAAGGTATACC.........................................................................................................................................................................	21	1	4.00	4	3	1	0	0	0	0
........................................................TTACGTATACTGAAGGTATT...........................................................................................................................................................................	20	1	4.00	4	1	1	0	0	2	0
..............................................................................................GGATACATTCAGTATACGTATA...................................................................................................................................	22	1	4.00	4	1	3	0	0	0	0
.............................................................................................AGGATACATTCAGTATACGT......................................................................................................................................	20	1	3.00	3	0	0	0	0	3	0
........................................................TTACGTATACTGAAGGTATACCGGA......................................................................................................................................................................	25	1	2.00	2	2	0	0	0	0	0
.........................................................TACGTATACTGAAGGTATACCG........................................................................................................................................................................	22	1	2.00	2	2	0	0	0	0	0
.........................................................TACGTATACTGAAGGTATA...........................................................................................................................................................................	19	1	2.00	2	2	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCA........................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0
.............................................................................................AGGATACATTCAGTATACGTAT....................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
..............................................................................................GGATACATTCAGTATACGTAT....................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGTTG.....................................................................................................................................................................	26	1	1.00	1	0	0	0	0	1	0
..........................................................ACGTATACTGAAGGTATACC.........................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGGTGT....................................................................................................................................................................	27	1	1.00	1	0	0	0	0	1	0
.........................................................TACGTATACTGAAGGTATACCGTT......................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
......................................................TGTTACGTATACTGAAGGTAG............................................................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0
......................................................TGTTACGTATACTGAAGGTATT...........................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATAA..........................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
.......................................................................................ACACTCAGGATACATTCAG.............................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGC.......................................................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0
...........................................................CGTATACTGAAGGTATACCGG.......................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
......................................................TGTTACGTATACTGAAGGTATACC.........................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0
........................................................TTACGTATACTGAAGGTAC............................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0
........................................................TTACGTATACTGAAGGTACT...........................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
.........................................................TACGTATACTGAAGGTATAC..........................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
......................................................TGTTACGTATACTGAAGGTATG...........................................................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0
......................................................TGTTACGTATACTGAAGGT..............................................................................................................................................................................	19	6	0.17	1	1	0	0	0	0	0

droBip1

AAATATTTCTAAAACAAAGT-TTT--CACGTCCCGCGTTGAAAGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAAAATCAC---------CAT--CCATC---GTAATTT------------------------------------------------TCTGGTAAGAT------------------------	Size	Hit Count	Total Norm	Total
No Reads

droKik1

--------------------------CACATCCCGCGTTGCTTGTGTTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTATACGAAGTTGCACAGAGTCAT---------CAT--CATCC---GCAAGTG----CTTA----TAAAGGACACGAAAAAGGA--------CTG----------CAGTTGC------------------------	Size	Hit Count	Total Norm	Total
No Reads

droFic1

--------------------------CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACACAATCAC---------TATGAAATCCGGCGAAAGTGA---CTGA----A------------A--GACG--TGTCGCTG--CAGTTC--GTGATGCAG------------ATTGAGAT--	Size	Hit Count	Total Norm	Total
No Reads

droEle1

--------------------------CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCAC---------CAT--AATCC---GAAAGTG----AC--------------------------------GATG--CAGTTG--CAGATGC------------------------	Size	Hit Count	Total Norm	Total
No Reads

droRho1

--------------------------CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCAC---------CAT--AATCC---GAAAGTG----CCAA----A------------CAGGATG--CGTCGCTG--CAGTTG--CAGATGA------------------------	Size	Hit Count	Total Norm	Total
No Reads

droBia1

--------------------------CACATCCCGCGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCAC---------CAT--AATCC---AAAAGTG----CCGA----G------------AAAGATG--CGC----------------CGCTGC------------------------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

AGTTTTAAA--AAGAAAAGTGTTT--CACATCCCACGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCAC---------CAT--AATCC---AAAAGTG----CCAA----AG-----------AAGGATG--CGCCGCTG--CAGTTC--CAGGTGC------------------------	Size	Hit Count	Total Norm	Total
No Reads

droEug1

TAAAC--------------TGTTT--CACATCCCACGTTGCTCGTGCTTCCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACACAATCAC---------TAT--AATCC---GAAAGTG----ACCA----A------------AATGAAG--T------G--CAGTTC--CAGATGCAGCCAAGCGATGAAATCCAGATTT	Size	Hit Count	Total Norm	Total
No Reads

dm3

AAA--------------AGTGTTT--CACATCCCACGTTGTTAGTGCTCTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGC---------CAT--TATTC---AAAAGTG----CTGA----A------------AATTATG--CGTCGTCG--CGGATC--CAAATGC------------------------	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
........................................................TTACGTATACTGAAGGTAT............................................................................................................................................................................	19	1	6832.00	6832	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	8	0	0	0	0	0	0	0	0	0	0	0	1	2	0	1	2	1	0	4	0	14	0	3	1	1	4	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	0	7	2	2	88	0	1	0	4	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	3	3	0	0	0	1	0	1	0	0	0	0	0	0	2	125	14	68	9	0	0	0	90	0	139	5	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	10	20	79	102	1	3	10	17	1	4	1	4	0	0	0	0	0	0	0	0	8	3	0	20	0	0	0	1	122	60	0	0	53	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	8	63	34	85	9	68	20	37	0	1	1016	0	0	3	2	3	3	3	32	100	51	0	265	20	50	30	40	290	0	206	245	0	0	3	29	55	0	1	1	973	0	3	0	2	209	0	0	517	18	382	124	233	217	221	0	0	0	0	1	0
........................................................TTACGTATACTGAAGGTATACC.........................................................................................................................................................................	22	1	923.00	923	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	3	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	1	2	0	0	0	0	6	0	0	0	0	0	0	1	0	1	0	0	0	4	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	1	0	0	2	45	4	9	0	3	0	2	5	0	0	0	0	0	7	10	0	7	0	0	0	0	13	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	5	4	6	2	0	49	146	0	0	1	60	0	0	0	0	0	0	0	0	27	25	0	3	0	0	0	0	154	32	0	0	24	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	1	5	1	4	0	4	0	0	102	2	0	0	0	0	1	1	7	2	0	0	0	1	4	0	1	1	0	5	2	0	0	1	0	0	0	0	0	33	0	0	0	0	11	0	0	2	0	8	1	3	2	2	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATA...........................................................................................................................................................................	20	1	564.00	564	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	3	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	5	0	2	0	0	0	0	0	0	0	0	0	0	0	4	0	3	0	0	0	0	11	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	2	5	0	0	4	30	2	1	2	8	0	0	0	0	4	2	0	0	1	1	0	2	0	0	0	0	98	50	0	0	35	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	2	0	2	0	1	61	0	0	0	0	0	0	0	4	0	0	0	5	0	1	0	0	4	0	4	5	0	0	0	1	0	0	0	0	53	0	0	0	0	30	0	0	16	0	37	5	13	7	7	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATAC..........................................................................................................................................................................	21	1	486.00	486	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	2	0	3	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	0	1	4	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	5	0	1	0	0	2	24	1	3	0	1	0	9	1	0	0	0	0	0	4	14	2	1	0	0	0	0	2	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	3	1	3	0	0	8	36	1	0	0	11	0	0	0	0	9	1	0	0	7	5	0	4	0	0	0	0	92	32	0	0	20	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	4	0	4	0	3	0	0	82	0	0	0	1	0	0	0	2	2	0	0	1	0	1	1	1	1	0	0	5	0	0	0	0	1	0	0	0	10	0	0	0	0	13	0	0	3	0	2	2	0	1	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCG........................................................................................................................................................................	23	1	194.00	194	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	6	0	2	1	0	2	15	2	0	0	6	2	1	0	0	1	0	2	3	2	2	2	1	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	21	0	3	0	0	0	0	17	0	28	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	0	0	13	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	9	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	9	0	0	0	0	4	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGG.......................................................................................................................................................................	24	1	167.00	167	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	3	1	0	0	1	0	2	2	0	0	0	0	0	3	32	1	2	0	0	0	0	16	0	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	4	1	1	0	0	4	20	0	0	0	6	0	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0	8	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	7	0	0	0	0	0	0	1	3	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................GGATACATTCAGTATACGTTTA...................................................................................................................................	22	1	165.00	165	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	34	0	21	35	1	0	0	2	0	6	0	0	3	0	0	8	1	0	2	7	0	1	0	0	0	0	0	0	0	0	7	2	0	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGT.......................................................................................................................................................................	24	1	155.00	155	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	14	0	1	0	0	0	0	8	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	31	1	0	0	0	0	0	0	5	2	0	0	0	1	1	0	0	2	0	1	1	0	0	0	0	0	0	0	0	41	0	0	0	0	23	0	0	0	0	4	0	1	1	0	0	0	0	0	0	0
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.........................................................TACGTATACTGAAGGTATACCGGAATC...................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATATT.........................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................TACGTATACTGAAGGTATAC..........................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................GTTACGTATACTGAAGGTATACCGG.......................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................ATACATTCAGTATACGTTT....................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................AGTGCTCTCTCGTGTTACGTA........................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGATC.....................................................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................GATAGGATACACTCAGGATACATTC...............................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

--------------------------CACATCCCACGTTGCTCGTGCTATCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGC---------CAT--TATCC---AAAAGTG----CTGA----A------------AATTATG--CCGTGTCG--CGGATC--TAGATGC------------------------	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
..............................................................................................GGATACATTCAGTATACGTTTACG.................................................................................................................................	24	1	196.00	196	0	0	0	0	194	2	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................AGGATACATTCAGTATACGTTTACG.................................................................................................................................	25	1	142.00	142	0	0	0	0	142	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGG.......................................................................................................................................................................	24	1	123.00	123	0	0	0	10	26	1	1	0	22	39	3	3	0	18	0	0	0
.............................................................................................AGGATACATTCAGTATACGTTT....................................................................................................................................	22	1	109.00	109	0	0	0	1	107	1	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTA.............................................................................................................................................................................	18	1	106.00	106	0	0	0	0	99	6	0	1	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTAT............................................................................................................................................................................	19	1	105.00	105	1	24	1	3	61	0	3	5	1	1	2	3	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATA...........................................................................................................................................................................	20	1	104.00	104	0	2	2	8	84	2	0	0	0	0	0	5	0	1	0	0	0
........................................................TTACGTATACTGAAGGTATACC.........................................................................................................................................................................	22	1	74.00	74	0	7	5	24	4	0	0	0	4	2	0	27	0	1	0	0	0
........................................................TTACGTATACTGAAGGTATAC..........................................................................................................................................................................	21	1	48.00	48	0	4	0	30	5	0	1	0	0	1	1	6	0	0	0	0	0
.............................................................................................AGGATACATTCAGTATAC........................................................................................................................................	18	1	38.00	38	0	0	0	0	38	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................AGGATACATTCAGTATACG.......................................................................................................................................	19	1	34.00	34	0	0	0	0	33	1	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCG........................................................................................................................................................................	23	1	34.00	34	0	0	2	1	14	0	0	0	0	0	1	0	0	16	0	0	0
........................................................TTACGTATACTGAAGGTATACCGGA......................................................................................................................................................................	25	1	27.00	27	0	2	5	1	6	0	0	0	2	5	1	4	0	1	0	0	0
.............................................................................................AGGATACATTCAGTATACGT......................................................................................................................................	20	1	20.00	20	0	0	0	0	20	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................GGATACATTCAGTATACGTTT....................................................................................................................................	21	1	19.00	19	0	0	0	0	18	1	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................GGATACATTCAGTATACG.......................................................................................................................................	18	1	15.00	15	0	0	0	0	15	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGGT......................................................................................................................................................................	25	1	14.00	14	0	1	0	0	0	0	2	0	2	2	1	0	0	6	0	0	0
..............................................................................................GGATACATTCAGTATACGT......................................................................................................................................	19	1	11.00	11	0	0	0	0	11	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................GGATACATTCAGTATACGTT.....................................................................................................................................	20	1	11.00	11	0	0	0	0	11	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................AGGATACATTCAGTATACGTT.....................................................................................................................................	21	1	9.00	9	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................TACGTATACTGAAGGTATACCGG.......................................................................................................................................................................	23	1	8.00	8	0	0	0	1	4	0	0	0	0	1	1	0	0	1	0	0	0
.........................................................TACGTATACTGAAGGTAT............................................................................................................................................................................	18	1	8.00	8	0	0	0	1	6	1	0	0	0	0	0	0	0	0	0	0	0
.........................................................TACGTATACTGAAGGTATACCG........................................................................................................................................................................	22	1	7.00	7	0	0	0	2	4	0	0	0	0	0	0	0	0	1	0	0	0
..............................................................................................GGATACATTCAGTATACGTTTA...................................................................................................................................	22	1	7.00	7	0	0	0	0	5	0	0	0	0	0	0	2	0	0	0	0	0
.....................................TTGCTCGTGCTATCTCGTG...............................................................................................................................................................................................	19	1	6.00	6	0	0	3	0	0	0	0	0	0	0	1	2	0	0	0	0	0
.........................................................TACGTATACTGAAGGTATACCGGA......................................................................................................................................................................	24	1	5.00	5	0	1	0	0	2	0	0	1	0	1	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGT.......................................................................................................................................................................	24	1	4.00	4	0	0	0	1	0	0	0	0	0	0	2	0	0	1	0	0	0
..............................................................................................GGATACATTCAGTATACGTTTAC..................................................................................................................................	23	1	4.00	4	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................GATACATTCAGTATACGTTTAA..................................................................................................................................	22	1	3.00	3	0	0	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0
.........................................................TACGTATACTGAAGGTATACC.........................................................................................................................................................................	21	1	3.00	3	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................ATAGGATACACTCAGGATACAT.................................................................................................................................................	22	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0
........................................................TTACGTATACTGAAGGTATACCGGG......................................................................................................................................................................	25	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................TACGTATACTGAAGGTATA...........................................................................................................................................................................	19	1	2.00	2	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................TACGTATACTGAAGGTATAC..........................................................................................................................................................................	20	1	2.00	2	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0
....................................GTTGCTCGTGCTATCTCGTG...............................................................................................................................................................................................	20	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGGAT.....................................................................................................................................................................	26	1	2.00	2	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................GATACATTCAGTATACGT......................................................................................................................................	18	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTAC............................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGT..............................................................................................................................................................................	17	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGTT......................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
........................................................TTACGTATACTGAAGGTATACT.........................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.........................................................TACGTATACTGAAGGTATACCGGAT.....................................................................................................................................................................	25	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCA........................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................CGTTGCTCGTGCTATCTCGTG...............................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGGC......................................................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
..............................................................ATACTGAAGGTATACCGG.......................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.............................................................................................AGGATACATTCAGTATACGTTTAC..................................................................................................................................	24	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................TAGGATACACTCAGGATACATTCAGT............................................................................................................................................	26	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATAA..........................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.............................................................................................AGGATACATTCAGTATACGTTTA...................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
........................................................TTACGTATACTGAAGGTAA............................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...............................................................................................GATACATTCAGTATACGTTTA...................................................................................................................................	21	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................GATAGGATACACTCAGGATACATTCA..............................................................................................................................................	26	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................ACGTATACTGAAGGTATACCG........................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
................................................................................................ATACATTCAGTATACGTTTAT..................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATT...........................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................GTTACGTATACTGAAGGTATACCGGA......................................................................................................................................................................	26	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................CATTCAGTATACGTTTACG.................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0

droSec2

AGATGTATTAAAA----AGTGTTT--CACATCCCACGTTGCTCGTGCTATCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGC---------CAT--TATCC---AAAAGTG----CTGA----A------------AATTATG--CCGTGTCG--CGGATC--TAGATGC------------------------	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
........................................................TTACGTATACTGAAGGTAT............................................................................................................................................................................	19	1	185.00	185	51	94	13	27
........................................................TTACGTATACTGAAGGTATACC.........................................................................................................................................................................	22	1	130.00	130	79	16	34	1
........................................................TTACGTATACTGAAGGTATA...........................................................................................................................................................................	20	1	70.00	70	34	21	10	5
........................................................TTACGTATACTGAAGGTATACCGG.......................................................................................................................................................................	24	1	56.00	56	38	1	17	0
........................................................TTACGTATACTGAAGGTATAC..........................................................................................................................................................................	21	1	47.00	47	31	10	3	3
........................................................TTACGTATACTGAAGGTATACCG........................................................................................................................................................................	23	1	27.00	27	12	2	13	0
........................................................TTACGTATACTGAAGGTATACCGGA......................................................................................................................................................................	25	1	17.00	17	6	2	9	0
........................................................TTACGTATACTGAAGGTA.............................................................................................................................................................................	18	1	15.00	15	0	0	13	2
........................................................TTACGTATACTGAAGGTATACCGT.......................................................................................................................................................................	24	1	10.00	10	1	7	2	0
.............................................................................................AGGATACATTCAGTATACGTTTA...................................................................................................................................	23	1	9.00	9	3	3	3	0
........................................................TTACGTATACTGAAGGTATACCGGT......................................................................................................................................................................	25	1	9.00	9	2	2	3	2
.........................................................TACGTATACTGAAGGTATAC..........................................................................................................................................................................	20	1	8.00	8	8	0	0	0
.............................................................................................AGGATACATTCAGTATACGTTT....................................................................................................................................	22	1	7.00	7	3	1	2	1
.........................................................TACGTATACTGAAGGTAT............................................................................................................................................................................	18	1	5.00	5	5	0	0	0
........................................................TTACGTATACTGAAGGTATAA..........................................................................................................................................................................	21	1	5.00	5	1	4	0	0
......................................................TGTTACGTATACTGAAGGTAT............................................................................................................................................................................	21	1	4.00	4	0	2	2	0
.........................................................TACGTATACTGAAGGTATACC.........................................................................................................................................................................	21	1	4.00	4	4	0	0	0
.........................................................TACGTATACTGAAGGTATACCGG.......................................................................................................................................................................	23	1	4.00	4	4	0	0	0
..............................................................................................GGATACATTCAGTATACGTTTA...................................................................................................................................	22	1	3.00	3	1	1	1	0
.....................................TTGCTCGTGCTATCTCGTG...............................................................................................................................................................................................	19	1	3.00	3	0	0	3	0
.........................................................TACGTATACTGAAGGTATACCGGA......................................................................................................................................................................	24	1	3.00	3	2	0	1	0
..............................................................ATACTGAAGGTATACCGG.......................................................................................................................................................................	18	1	2.00	2	0	0	2	0
.........................................................TACGTATACTGAAGGTATA...........................................................................................................................................................................	19	1	2.00	2	2	0	0	0
........................................................TTACGTATACTGAAGGTATACA.........................................................................................................................................................................	22	1	2.00	2	1	0	0	1
........................................................TTACGTATACTGAAGGTATT...........................................................................................................................................................................	20	1	2.00	2	0	2	0	0
........................................................TTACGTATACTGAAGGTATACCCC.......................................................................................................................................................................	24	1	1.00	1	1	0	0	0
..............................................................................................GGATACATTCAGTATACGTTT....................................................................................................................................	21	1	1.00	1	1	0	0	0
...................................................................................................CATTCAGTATACGTTTAA..................................................................................................................................	18	1	1.00	1	0	0	1	0
.........................................................TACGTATACTGAAGGTATACCG........................................................................................................................................................................	22	1	1.00	1	1	0	0	0
....................................GTTGCTCGTGCTATCTCGTG...............................................................................................................................................................................................	20	1	1.00	1	0	0	1	0
........................................................TTACGTATACTGAAGGTATACT.........................................................................................................................................................................	22	1	1.00	1	0	0	1	0
........................................................TTACGTATACTGAAGGTATACCGTT......................................................................................................................................................................	25	1	1.00	1	0	1	0	0
...........................................................CGTATACTGAAGGTATACCGGA......................................................................................................................................................................	22	1	1.00	1	0	0	1	0
........................................................TTACGTATACTGAAGGTATACCGGATA....................................................................................................................................................................	27	1	1.00	1	0	0	1	0
........................................................TTACGTATACTGAAGGTAA............................................................................................................................................................................	19	1	1.00	1	0	1	0	0
.........................................................TACGTATACTGAAGGTATACCGGT......................................................................................................................................................................	24	1	1.00	1	0	1	0	0

droYak3

--------------------------CACATCCCACGTTGCTCGTGCTTTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGC---------CTT--AGTCC---AAAAGTG----CTGA----A------------AATTACG--CGTCGTCG--CGGATC--GAGATGT------------------------	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
........................................................TTACGTATACTGAAGGTATACC.........................................................................................................................................................................	22	1	529.00	529	0	106	417	3	1	0	2	0	0	0	0
........................................................TTACGTATACTGAAGGTATAC..........................................................................................................................................................................	21	1	270.00	270	0	141	121	6	0	0	2	0	0	0	0
........................................................TTACGTATACTGAAGGTAT............................................................................................................................................................................	19	1	131.00	131	0	68	0	1	4	5	53	0	0	0	0
........................................................TTACGTATACTGAAGGTATA...........................................................................................................................................................................	20	1	91.00	91	0	50	21	14	0	0	6	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGG.......................................................................................................................................................................	24	1	86.00	86	0	42	39	5	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCG........................................................................................................................................................................	23	1	23.00	23	0	16	4	1	1	0	1	0	0	0	0
.........................................................TACGTATACTGAAGGTATACC.........................................................................................................................................................................	21	1	16.00	16	0	15	1	0	0	0	0	0	0	0	0
.........................................................TACGTATACTGAAGGTATAC..........................................................................................................................................................................	20	1	8.00	8	0	8	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGT.......................................................................................................................................................................	24	1	7.00	7	0	1	1	0	0	0	5	0	0	0	0
.............................................................................................AGGATACATTCAGTATACGTTTA...................................................................................................................................	23	1	6.00	6	0	0	4	2	0	0	0	0	0	0	0
.............................................................................................AGGATACATTCAGTATACGTTT....................................................................................................................................	22	1	5.00	5	0	2	3	0	0	0	0	0	0	0	0
.........................................................TACGTATACTGAAGGTATACCGG.......................................................................................................................................................................	23	1	5.00	5	0	5	0	0	0	0	0	0	0	0	0
.........................................................TACGTATACTGAAGGTAT............................................................................................................................................................................	18	1	4.00	4	0	4	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGGA......................................................................................................................................................................	25	1	4.00	4	0	0	2	2	0	0	0	0	0	0	0
......................................................TGTTACGTATACTGAAGGTATA...........................................................................................................................................................................	22	1	3.00	3	0	0	3	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGGT......................................................................................................................................................................	25	1	3.00	3	0	0	2	0	0	0	1	0	0	0	0
..............................................................................................GGATACATTCAGTATACGTTTA...................................................................................................................................	22	1	3.00	3	0	0	3	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATAA..........................................................................................................................................................................	21	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTA.............................................................................................................................................................................	18	1	2.00	2	0	1	1	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGGC......................................................................................................................................................................	25	1	2.00	2	0	0	1	1	0	0	0	0	0	0	0
..............................................................................................GGATACATTCAGTATACGTTT....................................................................................................................................	21	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0
.............................................................................................AGGATACATTCAGTATACGTT.....................................................................................................................................	21	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0
..............................................................................................GGATACATTCAGTATACGTTC....................................................................................................................................	21	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0
.....................................TTGCTCGTGCTTTCTCGTG...............................................................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
..........................................................ACGTATACTGAAGGTATACC.........................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................TACGTATACTGAAGGTATACCG........................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................ACGTATACTGAAGGTATACCGG.......................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGGG......................................................................................................................................................................	25	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
............................................................GTATACTGAAGGTATACCG........................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
..........................................................ACGTATACTGAAGGTATAC..........................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
................................................................................................ATACATTCAGTATACGTTTACC.................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATT...........................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
..........................................................ACGTATACTGAAGGTATACCGGC......................................................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.............................................................................................AGGATACATTCAGTATACGTTC....................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
.........................................................TACGTATACTGAAGGTATACCGGA......................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTAA............................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.......................................................GTTACGTATACTGAAGGTAT............................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.......................................................GTTACGTATACTGAAGGTATAC..........................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...................................CGTTGCTCGTGCTTTCTCGTG...............................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0
.........................................................TACGTATACTGAAGGTATA...........................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGA.......................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACA.........................................................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...........................................................CGTATACTGAAGGTATACC.........................................................................................................................................................................	19	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
...............................................................................................GATACATTCAGTATACGTTTAAC.................................................................................................................................	23	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0
...............................................................................................GATACATTCAGTATACGTTTAT..................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0

droEre2

--------------------------CACATCCCACGTTGCTCGTGCTTTCTCGTGTTACGTATACTGAAGGTATACCGGATAGGATACACTCAGGATACATTCAGTATACGTTTACGAGGTCGCACAGAATCGC---------CTT--AATCC---AAAAGTG----CTGA----A------------AATTATA--CGTCGTCG--CGGATC--CAGATGC------------------------	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
........................................................TTACGTATACTGAAGGTAT............................................................................................................................................................................	19	1	533.00	533	69	0	4	4	375	81	0
........................................................TTACGTATACTGAAGGTATACC.........................................................................................................................................................................	22	1	264.00	264	155	77	1	9	8	14	0
........................................................TTACGTATACTGAAGGTATAC..........................................................................................................................................................................	21	1	143.00	143	96	26	2	3	8	8	0
........................................................TTACGTATACTGAAGGTATA...........................................................................................................................................................................	20	1	105.00	105	55	7	0	17	12	14	0
........................................................TTACGTATACTGAAGGTATACCGG.......................................................................................................................................................................	24	1	99.00	99	83	5	0	1	6	0	4
........................................................TTACGTATACTGAAGGTATACCG........................................................................................................................................................................	23	1	34.00	34	28	2	1	0	3	0	0
........................................................TTACGTATACTGAAGGTATACCGT.......................................................................................................................................................................	24	1	17.00	17	6	1	0	0	10	0	0
.........................................................TACGTATACTGAAGGTATACC.........................................................................................................................................................................	21	1	13.00	13	12	1	0	0	0	0	0
.........................................................TACGTATACTGAAGGTATAC..........................................................................................................................................................................	20	1	13.00	13	12	0	0	0	1	0	0
........................................................TTACGTATACTGAAGGTA.............................................................................................................................................................................	18	1	9.00	9	1	0	0	0	0	8	0
.........................................................TACGTATACTGAAGGTATACCGG.......................................................................................................................................................................	23	1	8.00	8	8	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGGT......................................................................................................................................................................	25	1	7.00	7	3	0	0	0	4	0	0
........................................................TTACGTATACTGAAGGTATACCGGA......................................................................................................................................................................	25	1	7.00	7	3	1	0	1	2	0	0
.....................................TTGCTCGTGCTTTCTCGTG...............................................................................................................................................................................................	19	1	6.00	6	0	1	0	0	3	2	0
.........................................................TACGTATACTGAAGGTATACCG........................................................................................................................................................................	22	1	5.00	5	5	0	0	0	0	0	0
.............................................................................................AGGATACATTCAGTATACGTTT....................................................................................................................................	22	1	5.00	5	1	0	1	1	2	0	0
.........................................................TACGTATACTGAAGGTATA...........................................................................................................................................................................	19	1	3.00	3	3	0	0	0	0	0	0
..................................ACGTTGCTCGTGCTTTCTCGTG...............................................................................................................................................................................................	22	1	2.00	2	0	0	0	0	0	2	0
......................................................TGTTACGTATACTGAAGGTAT............................................................................................................................................................................	21	1	2.00	2	0	0	0	0	2	0	0
.............................................................................................AGGATACATTCAGTATACGTTTA...................................................................................................................................	23	1	2.00	2	1	0	0	1	0	0	0
........................................................TTACGTATACTGAAGGTATACCCT.......................................................................................................................................................................	24	1	2.00	2	1	0	0	1	0	0	0
..............................................................................................GGATACATTCAGTATACGTTTA...................................................................................................................................	22	1	2.00	2	1	1	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGA.......................................................................................................................................................................	24	1	2.00	2	2	0	0	0	0	0	0
.........................................................TACGTATACTGAAGGTAT............................................................................................................................................................................	18	1	2.00	2	2	0	0	0	0	0	0
.......................................................GTTACGTATACTGAAGGTATACC.........................................................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0	0
.................................................................................TAGGATACACTCAGGATACATTCA..............................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1	0
.........................................................TACGTATACTGAAGGTATACCGGA......................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0	0
.......................................................GTTACGTATACTGAAGGTATACCGT.......................................................................................................................................................................	25	1	1.00	1	1	0	0	0	0	0	0
...........................................................CGTATACTGAAGGTATAC..........................................................................................................................................................................	18	1	1.00	1	1	0	0	0	0	0	0
..............................................................................................GGATACATTCAGTATACGTT.....................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
.............................................................................................AGGATACATTCAGTATACGTTTAA..................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0	0
.........................................................TACGTATACTGAAGGTATACCGGT......................................................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATC...........................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0
.......................................................GTTACGTATACTGAAGGTATA...........................................................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
.....................................TTGCTCGTGCTTTCTCGTGT..............................................................................................................................................................................................	20	1	1.00	1	1	0	0	0	0	0	0
....................................GTTGCTCGTGCTTTCTCGTG...............................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0
........................................................TTACGTATACTGAAGGTAA............................................................................................................................................................................	19	1	1.00	1	0	0	0	0	1	0	0
..............................................................................................GGATACATTCAGTATACGTTT....................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATACCGGAA.....................................................................................................................................................................	26	1	1.00	1	1	0	0	0	0	0	0
........................................................TTACGTATACTGAAGGTATT...........................................................................................................................................................................	20	1	1.00	1	0	0	0	0	1	0	0
........................................................TTACGTATACTGAAGGTATACCGC.......................................................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0	0

dgr_28

scaffold_14906:12815121-12815181 -

Known Ortholog

Canonical miRNA

3pUTR

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-34.0	-33.4	-33.4