ID:

dgr_25

 Coordinate:

scaffold_14853:6339062-6339127 +

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

3pUTR

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-39.5 -39.4 -39.3

Flybase annnotation

utr3 [utr3_minus_9616]

No Repeatable elements found

Sense Strand Reads

ATAGTGTTTTTTTTTATTTAATTCTGATTATGAGAGCGCATTACATGTGAGTCCCTCATTTGGCGGACTTAGCTGCTTTTCAATTTGATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGTAAATCAACTGAGGAAAAATAAAATAAGTGTACAAATCAC

***********************************(((.(((((((((((((((.((((..(((((.((.(((......(((...)))....))))))))))..)))).))))))))))))))))))....*********************************** 		Read size # Mismatch Hit Count Total Norm Total V109

male body		 M041

female body
..............................................................................................TAGCTGCCTTGTGAAGGGCTT................................................... 21 0 1 1923.00 1923 1756 167
..............................................................................................TAGCTGCCTTGTGAAGGGCTTA.................................................. 22 0 1 202.00 202 113 89
..............................................................................................TAGCTGCCTTGTGAAGGGCT.................................................... 20 0 1 27.00 27 2 25
..............................................................................................TAGCTGCCTTGTGAAGGCCTT................................................... 21 1 1 21.00 21 21 0
..............................................................................................TAGCTGCCTTGTGAAGGTCTT................................................... 21 1 1 18.00 18 18 0
..............................................................................................TAGCTGCCTTGTGAAGGGCTTT.................................................. 22 1 1 18.00 18 7 11
..............................................................................................TAGCTGCCTTGTGAAGGGCTTAT................................................. 23 1 1 16.00 16 3 13
...............................................................................................AGCTGCCTTGTGAAGGGCTT................................................... 20 0 1 11.00 11 1 10
..............................................................................................TAGCTGCCTTGTGAAGGACTT................................................... 21 1 1 11.00 11 11 0
..............................................................................................TAGCTGCCTTGTGAAGGGCTTAA................................................. 23 1 1 9.00 9 5 4
..............................................................................................TATCTGCCTTGTGAAGGGCTT................................................... 21 1 1 8.00 8 8 0
..............................................................................................TACCTGCCTTGTGAAGGGCTT................................................... 21 1 1 7.00 7 7 0
.................................................AGTCCCTCATTTGGCGGACTTAGC............................................................................................. 24 0 1 6.00 6 0 6
..............................................................................................TAGCTGCCTTGTGAAGCGCTT................................................... 21 1 1 5.00 5 5 0
..............................................................................................CAGCTGCCTTGTGAAGGGCTT................................................... 21 1 1 5.00 5 5 0
..............................................................................................TAGCTGTCTTGTGAAGGGCTT................................................... 21 1 1 5.00 5 5 0
..............................................................................................TAACTGCCTTGTGAAGGGCTT................................................... 21 1 1 5.00 5 5 0
..............................................................................................TAGCTCCCTTGTGAAGGGCTT................................................... 21 1 1 5.00 5 5 0
..............................................................................................TAGCTGCCTTGTGAAGGGTTT................................................... 21 1 1 5.00 5 5 0
..............................................................................................TAGCTGCCTTGTGAAGGGC..................................................... 19 0 1 5.00 5 0 5
..............................................................................................TAGCTGCCTTGTGAAGGGCCT................................................... 21 1 1 5.00 5 3 2
..............................................................................................TAGCTGCCCTGTGAAGGGCTT................................................... 21 1 1 4.00 4 4 0
...............................................................................................AGCTGCCTTGTGAAGGGCTTA.................................................. 21 0 1 4.00 4 0 4
..............................................................................................TAGCTGCCTTGTGAAGGGCTTAG................................................. 23 1 1 4.00 4 4 0
..............................................................................................TAGCTGCCTTGTGAAGGGATT................................................... 21 1 1 4.00 4 4 0
..............................................................................................TAGCTGCCTCGTGAAGGGCTT................................................... 21 1 1 4.00 4 4 0
..............................................................................................TAGCTACCTTGTGAAGGGCTT................................................... 21 1 1 3.00 3 3 0
..............................................................................................TAGCTGCCTTGTGACGGGCTT................................................... 21 1 1 3.00 3 3 0
..............................................................................................TAGCTGCCTTGTGAAGGGCTTTT................................................. 23 2 1 3.00 3 3 0
..............................................................................................TAGCTGCCTTGTTAAGGGCTT................................................... 21 1 1 3.00 3 3 0
..............................................................................................TAGATGCCTTGTGAAGGGCTT................................................... 21 1 1 3.00 3 3 0
..............................................................................................TAGCTGCCTTTTGAAGGGCTT................................................... 21 1 1 3.00 3 3 0
..............................................................................................TAGCTGGCTTGTGAAGGGCTT................................................... 21 1 1 3.00 3 3 0
.............................................................................................CTAGCTGCCTTGTGAAGGGCTT................................................... 22 0 1 3.00 3 2 1
..............................................................................................TAGCTGCCGTGTGAAGGGCTT................................................... 21 1 1 3.00 3 3 0
..............................................................................................TAGCTGCCTTGCGAAGGGCTT................................................... 21 1 1 3.00 3 3 0
..............................................................................................TAGCTGCCTTGTGAAGGG...................................................... 18 0 1 2.00 2 0 2
..............................................................................................TAGCTGCCTTGTGGAGGGCTT................................................... 21 1 1 2.00 2 2 0
..............................................................................................TAGCTGACTTGTGAAGGGCTT................................................... 21 1 1 2.00 2 2 0
..............................................................................................TAGCTGCCTTGTGAAGGACTTA.................................................. 22 1 1 2.00 2 2 0
..............................................................................................TAGCTGCCTTGTCAAGGGCTT................................................... 21 1 1 2.00 2 2 0
..............................................................................................TAGCTTCCTTGTGAAGGGCTT................................................... 21 1 1 2.00 2 2 0
...............................................................................................AGCTGCCTTGTGAAGGGC..................................................... 18 0 1 2.00 2 0 2
...............................................................................................AGCTGCCTTGTGAAGGGCTTT.................................................. 21 1 1 2.00 2 0 2
..............................................................................................TAGCTGCCTTGTGAAGTGCTT................................................... 21 1 1 2.00 2 1 1
.................................................AGTCCCTCATTTGGCGGACTTAGGC............................................................................................ 25 2 1 1.00 1 0 1
...........................................................................................CTTTAGCTGCCTTGTGAAGGGCTT................................................... 24 3 1 1.00 1 0 1
...............................................................................................TGCTGCCTTGTGAAGGGCTT................................................... 20 1 1 1.00 1 1 0
.............................................................................................TTAGCTGCCTTGTGAAGGGCTT................................................... 22 1 1 1.00 1 0 1
..............................................................................................TAGCTGCCTTGTGAAGGGCTG................................................... 21 1 1 1.00 1 1 0
..............................................................................................TAGCTGCCTTGTGAAGGGCTA................................................... 21 1 1 1.00 1 1 0
..............................................................................................TAGCTCCCTTGTGAAGGGCTG................................................... 21 2 1 1.00 1 1 0
..............................................................................................TAGCCGCCTTGTGAAGGGCGT................................................... 21 2 1 1.00 1 1 0
.................................................AGTCCCTCATTTGGCGGACTTAG.............................................................................................. 23 0 1 1.00 1 0 1
..............................................................................................TAGCTGCCTTGGGAAGGGCTT................................................... 21 1 1 1.00 1 1 0
..............................................................................................TAGCTGCCATGCGAAGGGCTT................................................... 21 2 1 1.00 1 1 0
..............................................................................................TAGCTGCCTTGTGAAGGCCTTA.................................................. 22 1 1 1.00 1 1 0
..............................................................................................TAGCTGCCTTCTGAAGGGCTT................................................... 21 1 1 1.00 1 1 0
..............................................................................................TAGCTGCCTTGTGAAGGACCT................................................... 21 2 1 1.00 1 1 0
..............................................................................................TAGCTGCCTTGTGAAGGGCTTAC................................................. 23 0 1 1.00 1 0 1
..............................................................................................TAGCTGCCTTGTGAAAGGCTT................................................... 21 1 1 1.00 1 1 0
...............................................................................................AGCTGCCTTGTGAAGGGCTTAT................................................. 22 1 1 1.00 1 0 1
............................................................................................CTTAGCTGCCTTGTGAAGGGCTTA.................................................. 24 2 1 1.00 1 0 1
..............................................................................................TAGGTGCCTTGTGAAGGGCTT................................................... 21 1 1 1.00 1 1 0
..............................................................................................TAGCTGCCTTGTGAAGGGCTC................................................... 21 1 1 1.00 1 1 0
..............................................................................................TAGCTGCCTTGTGACGGGCTTA.................................................. 22 1 1 1.00 1 1 0
.................................................AGTCCCTCATTTGGCGGAC.................................................................................................. 19 0 1 1.00 1 0 1
..............................................................................................TAGCTCCCTTGTGAAGGGCTTA.................................................. 22 1 1 1.00 1 1 0
.............................................................................................ATAGCTGCCTTGTGAAGGGCTT................................................... 22 1 1 1.00 1 0 1
................................................................................................GCTGCCTTGTGAAGGGCTT................................................... 19 0 1 1.00 1 0 1
..............................................................................................TCGCTGCCTTGTGAAGGGCTT................................................... 21 1 1 1.00 1 1 0
...........................................................................................................AAGGGCTTACGTGTGATTGT....................................... 20 0 1 1.00 1 0 1
..............................................................................................TAGCGGCCTTGTGAAGGGCTT................................................... 21 1 1 1.00 1 1 0
..............................................................................................TAGCTGCCTTGTGAAGGGCTCAT................................................. 23 2 1 1.00 1 1 0
..............................................................................................TAGCTGCCTTGTGTAGGGCTT................................................... 21 1 1 1.00 1 1 0
..............................................................................................TAGCTGCCATGTGAAGGGCTT................................................... 21 1 1 1.00 1 1 0
..............................................................................................TAGCTGCCTTGTGAAGGTCTTA.................................................. 22 1 1 1.00 1 1 0
..............................................................................................TAGCTGCTTTGTGAAGGGCTT................................................... 21 1 1 1.00 1 1 0
..............................................................................................AATCTGCCTTGTGAAGGGCTT................................................... 21 2 1 1.00 1 1 0
..............................................................................................TAGCTGTCTTGTGAAGGGCTTA.................................................. 22 1 1 1.00 1 1 0
............................................................................................TATAGCTGCCTTGTGAAGGGCTTA.................................................. 24 2 1 1.00 1 0 1
..............................................................................................TAGCTGCCTTGTGAAGGGCTTCG................................................. 23 2 1 1.00 1 0 1
..............................................................................................TAGCTGCCTTGAGAAGGGCTT................................................... 21 1 1 1.00 1 1 0
..............................................................................................TAGCTGCCTTGTGCAGGGCTT................................................... 21 1 1 1.00 1 1 0
...............................................................................................AGCTGCCTTGTGAAGGGCT.................................................... 19 0 1 1.00 1 0 1
..............................................................................................TAACTGCCTTGTGAGGGGCTT................................................... 21 2 1 1.00 1 1 0
..............................................................................................TAGCTACCTTGTGAAGGGCTTA.................................................. 22 1 1 1.00 1 1 0
..............................................................................................TAGCTGCCTTGAAAAGGGCTT................................................... 21 2 1 1.00 1 1 0
..............................................................................................TAGCAGCCTTGTGAAGGGCTT................................................... 21 1 1 1.00 1 1 0
.............................................................................................CTAGCTGCCTTGTGAAGGGCTTA.................................................. 23 0 1 1.00 1 0 1
..............................................................................................TAGCTGCCTTATGAAGGGCTT................................................... 21 1 1 1.00 1 1 0
..............................................................................................TAACTGCCTTGTGAAGGGCTTA.................................................. 22 1 1 1.00 1 1 0
..............................................................................................TAGTTGCCTTGTGAAGGGCTT................................................... 21 1 1 1.00 1 1 0
..............................................................................................TAGCTGCCTTGTGAAGGGCTTG.................................................. 22 1 1 1.00 1 0 1

Anti-sense strand reads

TATCACAAAAAAAAATAAATTAAGACTAATACTCTCGCGTAATGTACACTCAGGGAGTAAACCGCCTGAATCGACGAAAAGTTAAACTATAACGATCGACGGAACACTTCCCGAATGCACACTAACATTTAGTTGACTCCTTTTTATTTTATTCACATGTTTAGTG

***********************************(((.(((((((((((((((.((((..(((((.((.(((......(((...)))....))))))))))..)))).))))))))))))))))))....*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droGri2 scaffold_14853:6339012-6339177 + dgr_25 candidate-rescued ATAGTGTTT----------------------------------TTTT--------T---------------------------T-ATTTAATTC-TGATTA----------------------TGAGAGCGCATTACATGTGAGTCCCTCATTTGGCGGACTTAGCTGCTTTTCAATTT--GATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGTAAATCAACTGAGGAA---AAATAAAATAAGTGT---ACAAATCAC
droVir3 scaffold_10277:994-1221 - dvi-mir-980 Known_mirbase GCCCTACGCAAGTGAAAAATAATTGCATTTTATTTATTTATTTTTTT-----TTTTTTTTGAGT-----GCTTAA-AAGACG--C-TGGG------------CTATAAAATTTGGACCAAATGTGAGAGCGCATTGCATGTGAGTCCCTCATTTGGCAGGTTTAGCTGCTTTT-AATAC--GATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGTTAAACAACTTAAACA-ACAAATAAATTAAGTAC---AC------C
droMoj3 scaffold_6473:11075526-11075669 + dmo_9 confident TAAGTG------------------------------------------------------------------CAA-TAAGTG--T-TTAA--------GT---------------TATTTAT-ATGAACCGCATTGCATGTGAGTCCCTCATTTGGTGCGCTTAGCTGTTTTTCAATTT--GATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGTTTGTAATACAACAGAAAT-------------------AAGC--------
droWil2 scf2_1100000004909:8731771-8731899 + dwi_30 confident A------------------------------------------------------------------------------------------------------------------------------------TTGTGTGTGAGTCTTTCACTGGGCGTGCTTAGCTAGAAATTTATTTACCATATTGCTAGCTGCCTTGTGAAGTGCTTACGTGTAATTGTTGAACAACAAAAAAA---AATCAGAAAAAGCAT---AAATTTCAT
dp5 XL_group1e:4097644-4097800 - dps-mir-980 Known_mirbase CGGTTTTTT----------------------------------TTTT-------TTTTTTGAGT--------GAC-AA-ATTTCTGT-GAA-TT-CCCGC---------------CACAAAA-GAGAAACAAATTGAATGTGAGTCTCTCACATGGCTGGTCTAGCTGACTTGTT-TCT--AATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTTTTTGTAGCCCAAC-------------------------------------
droPer2 scaffold_17:1039193-1039351 - dpe_10 confident AGTTTTTTT----------------------------------TTTT-----TTTTTTTTGAGT--------GAC-AAAGT-TCTGT-GAA-TT-CCCGC---------------CACAAAA-GAGAAACAAATTGTATGTGAGTCTCTCACATGGCTGGTCTAGCTGACTTGTT-TCT--AATACTGCTAGCTGCCTTGTGAAGGGCTTACGTGTTTTTGTAGCCCAAC-------------------------------------
droAna3 scaffold_13117:4815191-4815346 - dan_130 candidate-rescued ATCCTGTTT----------------------------------TTTTTATT--TTT---TTT-----ATATTTAA-AAAGTG--A-TAAGAAATGTCC-----------------------T-AGGAAGTAATTTGTATGTCAGCCTCTCATTTGGCCTGCCTAGCTGACTTTAA-ATT--AATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGATTCAACT------------------------------------
droBip1 scf7180000395508:43122-43269 + ATTTTTTGT----------------------------------AT---------------------------TAA-AAAGTG--A-TTAGATTTGTCC-----------------------T-TGAAAGTAAATTGTATGTCAGCCTCTCATTTGGCCTGCCTAGCTGACTTTAA-ATT--AATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGATTCAACTTGAAA-------------------AATA--------
droFic1 scf7180000453927:606417-606559 - TAATCCTT------------------------------------------------------------------------------------------TT---------------TATATAA-GTGAAGATAATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTGACTTCTGTTTA--AATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGCTCAACTGACTGAG--A-----------TAT---ATATATCCT
droEle1 scf7180000491011:1178497-1178595 - ------------------------------------------------------------------------------------------------------------------------------------ATTGTATGTCAGTTTTTCATTTGGCGTGACTAGCTGACTTTTGTTTA--AATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTGA----------------------------------
droRho1 scf7180000779506:958290-958433 - CTTGTTTTT----------------------------------TTTT-------TGA-----------G-TTAAGT-GAATA--------T-TT---------------------G-GGAAA-GTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCGGGCCTAGCTGACTTCTGTTAA--AATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTG-----------------------------------
droBia1 scf7180000301760:1131730-1131826 - ------------------------------------------------------------------------------------------------------------------------------------ATCATATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTG-TTC--AATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGGTTGCGGCTCAACTG-----------------------------------
droTak1 scf7180000415179:121504-121672 - GTTTCTT------------------------------------------------------------AG-TTCAA-AAAGT-TGA-TTAAATTT-CCCGCGGTT------T----GCAGAAT-GTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCTTGCCTAGCTGACTTCTGTTTA--AATATCGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGGTTCAACTGGCAGG---A-------------T---GTGTGTC-C
droEug1 scf7180000409277:495711-495892 - CTTGTTTTT----------------------------------CTTTTCTTTTTTTTTTTGAGTTTTGG-TTAAAT-GAGT-T-----GAA--T-TGCGCG---------T----TTGGAAA-GTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTGACCTTTGTTTA--AATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTGGCAGG---A-------------TAAAT--------
dm3 chrX:174188-174345 - dme-mir-980 Known_mirbase TTGTTTTTT----------------------------------ATTT-------TT---------------------------T-GTTAAATTT-CCCGCG---------T----GTGAAAT-ACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTA--AATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAA---T--------------AATAAA------
droSim2 x:113234-113388 - dsi-mir-980 Known_mirbase ACATTTTTT----------------------------------TTTT--------T---------------------------T-GTTAAATTT-TCCGCG---------T----GTGAAAT-ACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGGCTAGCTCACTACTTTTTT--AATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCAACTGCCAAA---T--------------AATA--------
droSec2 scaffold_10:47183-47331 - dse_14 confident TTTTTTT------------------------------------------------T---------------------------T-GTTAAATTT-TCCGCG---------T----GTGAAAT-ACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGGCTAGCTCACTACTTTTTT--AATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCAACTGCCAAA---T--------------AATA--------
droYak3 X:117066-117218 - dya_19 confident AACATTTT------------------------------------TTT--------T-----------AG-TTTAAT-AAAT-TAA-T-G-ATTT-CCCGCG---------T----GTGAGAT-GTGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTTAGCTTTTTTTA--AATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACT------------------------------------
droEre2 scaffold_4644:121637-121798 - der_10 confident AAACTATTT----------------------------------TTTT-------TAA-----------G-TTAAAT-AAATA--------A-TT-CCCGCG---------T----GTGAAAT-GTGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTTACCTCTTTTTA--AATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGTAGTTCGACTGCAAAA---T--------------TATA--------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droGri2
ATAGTGTTT----------------------------------TTTT--------T---------------------------T-ATTTAATTC-TGATTA----------------------TGAGAGCGCATTACATGTGAGTCCCTCATTTGGCGGACTTAGCTGCTTTTCAATTT--GATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGTAAATCAACTGAGGAA---AAATAAAATAAGTGT---ACAAATCACSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTT.........................................................2111923.0019231671756
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA........................................................221202.0020289113
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCT..........................................................20127.0027252
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT........................................................22118.0018117
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.......................................................23116.0016133
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTT.........................................................20111.0011101
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.......................................................2319.00945
..............................................................................................................................................AGTCCCTCATTTGGCGGACTTAGC.....................................................................................................2416.00660
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGC...........................................................1915.00550
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTA........................................................2114.00440
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.......................................................2314.00404
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT.......................................................2313.00303
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTT.........................................................2213.00312
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGG............................................................1812.00220
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGC...........................................................1812.00220
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTT........................................................2112.00220
..............................................................................................................................................AGTCCCTCATTTGGCGGACTTAGGC....................................................................................................2511.00110
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTG.........................................................2111.00101
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTA.........................................................2111.00101
..............................................................................................................................................AGTCCCTCATTTGGCGGACTTAG......................................................................................................2311.00110
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.......................................................2311.00110
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTAT.......................................................2211.00110
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTC.........................................................2111.00101
..............................................................................................................................................AGTCCCTCATTTGGCGGAC..........................................................................................................1911.00110
...............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTT.........................................................1911.00110
..........................................................................................................................................................................................................AAGGGCTTACGTGTGATTGT.............................................2011.00110
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTCG.......................................................2311.00110
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCT..........................................................1911.00110
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA........................................................2311.00110
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG........................................................2211.00110
droVir3
GCCCTACGCAAGTGAAAAATAATTGCATTTTATTTATTTATTTTTTT-----TTTTTTTTGAGT-----GCTTAA-AAGACG--C-TGGG------------CTATAAAATTTGGACCAAATGTGAGAGCGCATTGCATGTGAGTCCCTCATTTGGCAGGTTTAGCTGCTTTT-AATAC--GATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGTTAAACAACTTAAACA-ACAAATAAATTAAGTAC---AC------CSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTT.........................................................21129096.00290961428916433121257833121249492510480001023108048612171033714367130722967187074222223139449634130943076132814150000000022412102008450345334330080007119791100000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA........................................................22115065.0015065261921752271932262713000142516133248031226103012314022470233659522824924166510067402322534774560000000000000000000152771730147400000001200000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT........................................................2211272.001272002706201921640007810240127797313111217254122519135212660260100935000000000000000100001310061800000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.......................................................231578.005780016057100000004858947413914693143611918296340200002140000000000000000000013041100000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCT..........................................................201515.005151241214251410912130001522164124111019552901646150503000001544000000000000100000001200000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.......................................................231416.004160029013300100002349103429270376942388313318040000090000000000000000000024081200000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTC........................................................221172.00172106025000200007414147421820000180100800001130000000000000000000014200000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT.......................................................231131.0013100100220000000710721109282631001113303001011000000000000000000001105000000000000000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTT.........................................................20191.009100800000000000010121000000000010000000001000000000000000000002200000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.......................................................23190.0090001002153230005622321442001103030200002600000000000000000000111000300000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGC...........................................................19182.008221600220132000712243114660001000004000015000000000000000000104000000000100000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA......................................................24174.0074001000000000009421075041300021311312001002000000000000000000001001000000000000000
..............................................................................................................................................AGTCCCTCATTTGGCAGGTTTAGC.....................................................................................................24172.007220158000000000032161001700011431001000001000000000100001100114200000000010200000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG........................................................22158.00580110001012100023242124311213010006000001000000000000000000014700000000000000000
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTT.........................................................22156.00560061010300100014311605511021010300000000000000000000000000003600000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT......................................................24152.00520010100000000061181505800112430300000000000000000000000000000001000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGG............................................................18146.00460000052200400035133010120000000006000026000000000000000000000000000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTC.........................................................21143.00434002042200100003002031200010010001000011000000000000000000014700000000000000000
..............................................................................................................................................AGTCCCTCATTTGGCAGGTTTAG......................................................................................................23134.00340050110000000012050010500011101200000001000000000000000000015000000000000000000
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA........................................................23127.00270000000000000022113204601001000300000000000000000000000000001000000000000000000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTA........................................................21122.002200120000000000003001000100010010100000000000000000000000000001100000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.......................................................23122.00220010010000000022100203600001010000000001000000000000000000001000000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTA.........................................................21121.00210000020200100006001020200000010000000000000000000000000000003100000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTA.......................................................23114.00140000000000000012000002600100000000000001000000000000000000000100000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTT......................................................24112.00120000000000000001031201200000010100000000000000000000000000000000000000000000000
.................................................................................................................................................................................................TGCCTTGTGAAGGGCTTA........................................................18111.00110010001000000002120101010000010000000000000000000000000000000000000000000000000
................................................................................................................................................................................................CTGCCTTGTGAAGGGCTT.........................................................18111.00110030030001300000001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATC......................................................24111.00110010000000000020000000000000020400000002000000000000000000000000000000000000000
...............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTT.........................................................19110.00100040000000100000000000110000000000000010000000000000000000002000000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAAA.....................................................2518.0080000000000000001000000110100011101000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTG.......................................................2318.0080000000100000000000000210000010101000001000000000000000000000000000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATCC.....................................................2517.0070000000000000000000000000000010100000001000000000000000000000400000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTACC......................................................2417.0071010000000000000000000000000000000000000000000000000000000000500000000000000000
..............................................................................................................................................AGTCCCTCATTTGGCAGGTTTAGCC....................................................................................................2517.0070012000000000000000000000000000000000000000000000000020000020000000000000000000
...............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTTA........................................................2016.0060030000000000000000002000000010000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAT......................................................2416.0060000000000000001001001200000000100000000000000000000000000000000000000000000000
..............................................................................................................................................AGTCCCTCATTTGGCAGGTTTA.......................................................................................................2216.0060020000000000011000000100000000100000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTCT.......................................................2316.0060000000001000000010010100000001000000000000000000000000000000100000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTG.........................................................2125.00100010000200000002000020100000000000000000000000000000000000002000000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATA......................................................2415.0050000000000000000011001000000000001000001000000000000000000000000000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCC..........................................................2015.0051210000001000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................AGTCCCTCATTTGGCAGGTTT........................................................................................................2114.0040010000000000000010000000000000100000000000000000000000000001000000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGA...........................................................1914.0040000000100000000000100000000000000000000000000000000000000000200000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTGT......................................................2414.0040000000000000000010000000000000000000000000000000000000000000000300000000000000
................................................................................................................................................................................................CTGCCTTGTGAAGGGCTTA........................................................1913.0030000010000000001000000000100000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTT........................................................2313.0030000000000000000010101000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCT..........................................................1913.0030030000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGG.............................................................1713.0030000000000000000000000000000000000000000000000000000000300000000000000000000000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTAA.......................................................2212.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTC........................................................2112.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGT...........................................................1912.0020000000000000000000000000000010000000000000000000000000000000100000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTAA......................................................2412.0020000000000000000000000100000000000000000000000000000000000001000000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTCA.......................................................2312.0020000000000000000000001010000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCT..........................................................2112.0020000000000000000000000200000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTT........................................................2112.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTAT........................................................2212.0020000000000000002000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTCC........................................................2221.5030000000000000000000030000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTTAAAA.....................................................2311.0010000000000000000001000000000000000000000000000000000000000000000000000000000000
droMoj3
TAAGTG------------------------------------------------------------------CAA-TAAGTG--T-TTAA--------GT---------------TATTTAT-ATGAACCGCATTGCATGTGAGTCCCTCATTTGGTGCGCTTAGCTGTTTTTCAATTT--GATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGTTTGTAATACAACAGAAAT-------------------AAGC--------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTT.........................................................21122356.00223561310849468069094508158
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA........................................................2212645.002645317131627967262341
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCT..........................................................201591.0059116351562142330
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTC........................................................221272.002728514650387
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTC.........................................................211215.0021524027483779
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTT.........................................................221192.00192155518254237
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT........................................................221139.001394233027532
..............................................................................................................................................AGTCCCTCATTTGGTGCGCTTAGC.....................................................................................................241135.00135916011090
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTT.........................................................20185.008562121055
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.......................................................23181.0081542123127
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.......................................................23175.00754924938
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGC...........................................................19159.0059170122073
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.......................................................23156.00562617949
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG........................................................22147.0047511515011
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGG............................................................18143.004380112103
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTA........................................................21125.00252300200
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCT..........................................................21123.00231251122
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTA.........................................................21121.00210051105
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATC......................................................24118.0018804501
...............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTT.........................................................19113.0013502420
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCT..........................................................19113.00131300000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTG.........................................................21111.0011004304
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATCC.....................................................25111.0011701201
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.......................................................2319.009103311
...............................................................................................................................................GTCCCTCATTTGGTGCGCTTAGCT....................................................................................................2419.009140130
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTC........................................................2119.009900000
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA........................................................2318.008111050
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTC......................................................2418.008201104
..............................................................................................................................................AGTCCCTCATTTGGTGCGCTTAG......................................................................................................2317.007420010
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTCT........................................................2217.007500200
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTCT.......................................................2315.005201101
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTAT.......................................................2215.005500000
................................................................................................................................................................................................CTGCCTTGTGAAGGGCTT.........................................................1815.005410000
..............................................................................................................................................AGTCCCTCATTTGGTGCGCTTAGCT....................................................................................................2514.004010030
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTC.........................................................2214.004001030
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGA...........................................................1914.004000202
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCC..........................................................2014.004100030
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT......................................................2414.004101011
...............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTTA........................................................2014.004210010
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTT........................................................2313.003000030
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA......................................................2413.003000201
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTA.......................................................2313.003001101
...............................................................................................................................................GTCCCTCATTTGGTGCGCTTAGC.....................................................................................................2313.003200010
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTCG.......................................................2313.003003000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT.......................................................2313.003000201
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTT........................................................2113.003300000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTG.......................................................2313.003001200
................................................................................................................................................................................................CTGCCTTGTGAAGGGCTTA........................................................1913.003100020
..............................................................................................................................................AGTCCCTCATTTGGTGCGCTTAGCC....................................................................................................2513.003100020
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTG........................................................2112.002200000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTAA.......................................................2212.002200000
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTC........................................................2312.002200000
...............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTC.........................................................1912.002100010
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTATCC.....................................................2412.002200000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTACT......................................................2412.002001100
................................................................................................................................................TCCCTCATTTGGTGCGCTTAGCC....................................................................................................2312.002000020
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTC.........................................................2012.002200000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTAG.......................................................2212.002200000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATTC.....................................................2512.002100001
.................................................................................................................................................................................................TGCCTTGTGAAGGGCTTC........................................................1812.002200000
..........................................................................................................................................................................................TGCTAGCTGCCTTGTGAAGGGC...........................................................2212.002000011
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGC...........................................................2012.002001001
................................................................................................................................................TCCCTCATTTGGTGCGCTTAGC.....................................................................................................2212.002000020
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTCA.......................................................2311.001001000
droWil2
A------------------------------------------------------------------------------------------------------------------------------------TTGTGTGTGAGTCTTTCACTGGGCGTGCTTAGCTAGAAATTTATTTACCATATTGCTAGCTGCCTTGTGAAGTGCTTACGTGTAATTGTTGAACAACAAAAAAA---AATCAGAAAAAGCAT---AAATTTCATSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGTGCTTA........................................................2217660.00766064617135543937
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGTGCTT.........................................................2115689.00568916784143319961460
..............................................................................................................................................AGTCTTTCACTGGGCGTGCTTAGC.....................................................................................................241880.0088006377596
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGTGCTTT........................................................221232.00232179456245
..............................................................................................................................................AGTCTTTCACTGGGCGTGCTTAGCT....................................................................................................251131.0013104210916
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGTGCTT.........................................................221126.00126013207221
................................................................................................................................................TCTTTCACTGGGCGTGCTTAGCT....................................................................................................231119.001192118530
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGTGCT..........................................................20196.0096326271327
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGTGCTTAA.......................................................23193.009308205411
..............................................................................................................................................AGTCTTTCACTGGGCGTGCTTAG......................................................................................................23177.00770121595
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGTGCTTA........................................................23170.0070051622
..............................................................................................................................................................................................AGCTGCCTTGTGAAGTGCTT.........................................................20159.0059056111
................................................................................................................................................TCTTTCACTGGGCGTGCTTAG......................................................................................................21141.0041522437
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGTGC...........................................................19136.00360601614
..............................................................................................................................................................................................AGCTGCCTTGTGAAGTGCTTA........................................................21134.0034028060
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGTGCTTAT.......................................................23129.0029012845
..............................................................................................................................................AGTCTTTCACTGGGCGTGCTT........................................................................................................21118.001805445
................................................................................................................................................TCTTTCACTGGGCGTGCTT........................................................................................................19118.0018052110
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGTGCT..........................................................21115.0015002103
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGTGCTTAAA......................................................24115.001504182
..............................................................................................................................................AGTCTTTCACTGGGCGTGCTTA.......................................................................................................22114.001404190
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGTGCTTTT.......................................................23114.001403623
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGTGC...........................................................20113.001301075
......................................................................................................................................................................TAGAAATTTATTTACCATATTGC..............................................................................23113.0013010120
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGTGCTTAG.......................................................23111.001102423
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGTGCTTT........................................................23110.001003160
................................................................................................................................................TCTTTCACTGGGCGTGCTTAGCTA...................................................................................................2419.00903060
..............................................................................................................................................AGTCTTTCACTGGGCGTGCTTAGA.....................................................................................................2418.00800062
................................................................................................................................................TCTTTCACTGGGCGTGCTTAGC.....................................................................................................2218.00802051
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGTGCTTC........................................................2217.00703130
...........................................................................................................................................................................................GCTAGCTGCCTTGTGAAGTGCT..........................................................2216.00600042
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGTG............................................................1816.00602040
...............................................................................................................................................................................................GCTGCCTTGTGAAGTGCTTA........................................................2016.00601221
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGTGCTTG........................................................2216.00601221
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGTGCTC.........................................................2115.00502102
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGTGCTA.........................................................2115.00501121
..........................................................................................................................................................................................TGCTAGCTGCCTTGTGAAGTGCT..........................................................2314.00400103
......................................................................................................................................................................................ATATTGCTAGCTGCCTTGTGAAGTGCT..........................................................2714.00400040
.................................................................................................................................................................................................................TACGTGTAATTGTTGAACAACAAA..................................2414.00400022
................................................................................................................................................................................................CTGCCTTGTGAAGTGCTT.........................................................1814.00403010
...............................................................................................................................................................................................GCTGCCTTGTGAAGTGCTT.........................................................1914.00402011
...........................................................................................................................................................................................GCTAGCTGCCTTGTGAAGTGCTT.........................................................2314.00400040
..............................................................................................................................................AGTCTTTCACTGGGCGTGCTTT.......................................................................................................2214.00402002
...............................................................................................................................................GTCTTTCACTGGGCGTGCTTAGC.....................................................................................................2313.00301020
................................................................................................................................................................................................CTGCCTTGTGAAGTGCTTA........................................................1913.00303000
..............................................................................................................................................AGTCTTTCACTGGGCGTGCTAGC......................................................................................................2313.00300030
..............................................................................................................................................................................................AGCTGCCTTGTGAAGTGCTTT........................................................2113.00303000
................................................................................................................................................TCTTTCACTGGGCGTGCTTA.......................................................................................................2013.00301101
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGTGCTG.........................................................2112.00200200
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGTGCTTAC.......................................................2312.00200020
..............................................................................................................................................AGTCTTTCACTGGGCGTGCTTAGCA....................................................................................................2512.00200020
..............................................................................................................................................................................................AGCTGCCTTGTGAAGTGC...........................................................1812.00202000
................................................................................................................................................TCTTTCACTGGGCGTGCTTAGCTAG..................................................................................................2512.00201001
..............................................................................................................................................................................................AGCTGCCTTGTGAAGTGCTTAA.......................................................2212.00202000
.........................................................................................................................................................................................TTGCTAGCTGCCTTGTGAAGTGCTT.........................................................2512.00200020
.................................................................................................................................................................................................................TACGTGTAATTGTTGAACAACAAAA.................................2512.00210001
............................................................................................................................................TGAGTCTTTCACTGGGCGTGCTT........................................................................................................2312.00202000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGTGCT..........................................................1912.00202000
..............................................................................................................................................AGTCTTTCACTGGGCGTGCTTAGCTAG..................................................................................................2712.00200020
..............................................................................................................................................AGTCTTTCACTGGGCGTGC..........................................................................................................1912.00200020
...........................................................................................................................................................................ATTTATTTACCATATTGC..............................................................................1811.00101000
..............................................................................................................................................AGTCTTTCACTGGGCGTGCTTTT......................................................................................................2311.00101000
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGTGCTTG........................................................2311.00101000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGTGCTTATT......................................................2411.00100001
..............................................................................................................................................AGTCTTTCACTGGGCGTGCTTAGCC....................................................................................................2511.00100001
...............................................................................................................................................GTCTTTCACTGGGCGTGCTTAGCT....................................................................................................2411.00101000
..............................................................................................................................................AGTCTTTCACTGGGCGTGCTTAT......................................................................................................2311.00100010
............................................................................................................................................................................TTTATTTACCATATTGCTAGCTG........................................................................2311.00110000
........................................................................................................................................................................................ATTGCTAGCTGCCTTGTGAAGTGCT..........................................................2511.00100010
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGTGCTTAAT......................................................2411.00100010
..........................................................................................................................................................................................TGCTAGCTGCCTTGTGAAG..............................................................1911.00100001
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGTGCTTATA......................................................2411.00100100
............................................................................................................................................TGAGTCTTTCACTGGGCGTGCT.........................................................................................................2211.00100010
..............................................................................................................................................AGTCTTTCACTGGGCGTGCTTAGT.....................................................................................................2411.00100010
..............................................................................................................................................................................................AGCTGCCTTGTGAAGTGCTTAT.......................................................2221.00202000
................................................................................................................................................TCTTTCACTGGGCGTGCTTAGA.....................................................................................................2211.00100100
.................................................................................................................................................CTTTCACTGGGCGTGCTTAGCT....................................................................................................2211.00100010
.................................................................................................................................................CTTTCACTGGGCGTGCTTAGCTA...................................................................................................2311.00101000
........................................................................................................................................................................................ATTGCTAGCTGCCTTGTGAAGTGCTT.........................................................2611.00100100
..............................................................................................................................................AGTCTTTCACTGGGCGTGCTTAA......................................................................................................2311.00101000
..................................................................................................................................................TTTCACTGGGCGTGCTTAGC.....................................................................................................2011.00100010
...............................................................................................................................................................................................GCTGCCTTGTGAAGTGCTTT........................................................2011.00101000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGTGCC..........................................................2011.00100001
................................................................................................................................................TCTTTCACTGGGCGTGCTTT.......................................................................................................2011.00101000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGTGCTTC........................................................2111.00101000
..........................................................................................................................................................................................TGCTAGCTGCCTTGTGAAGTG............................................................2111.00100001
dp5
CGGTTTTTT----------------------------------TTTT-------TTTTTTGAGT--------GAC-AA-ATTTCTGT-GAA-TT-CCCGC---------------CACAAAA-GAGAAACAAATTGAATGTGAGTCTCTCACATGGCTGGTCTAGCTGACTTGTT-TCT--AATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTTTTTGTAGCCCAAC-------------------------------------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTT.........................................................21110506.001050602346446050538093737050
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA........................................................2211895.00189507132017877982172401
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCT..........................................................201532.0053203534641614000
..............................................................................................................................................AGTCTCTCACATGGCTGGTCTAGC.....................................................................................................241466.004660235991131450000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT........................................................221253.0025301620316126000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTT.........................................................201193.001930180000112000
..............................................................................................................................................AGTCTCTCACATGGCTGGTCTAG......................................................................................................231184.00184017053320100
..............................................................................................................................................AGTCTCTCACATGGCTGGTC.........................................................................................................201180.00180017712000000
..............................................................................................................................................AGTCTCTCACATGGCTGGTCT........................................................................................................211126.00126212012010000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.......................................................231110.00110093001132010
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGC...........................................................19186.0086166420121000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.......................................................23175.0075061100103000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTA........................................................21149.004904800001000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGG............................................................18148.004804100160000
..............................................................................................................................................AGTCTCTCACATGGCTGGTCTA.......................................................................................................22132.003212803000000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCT..........................................................19129.002902900000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT.......................................................23129.002901900064000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGT...........................................................19122.002201400035000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTC.........................................................21119.00190143164000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTT........................................................21118.001801800000000
...............................................................................................................................................GTCTCTCACATGGCTGGTCTAGC.....................................................................................................23117.001701700000000
..............................................................................................................................................AGTCTCTCACATGGCTGGTCTAGT.....................................................................................................24116.001601500100000
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTT.........................................................22115.00150511044000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.......................................................23114.00140400082000
...............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTT.........................................................19113.001301000210000
...............................................................................................................................................GTCTCTCACATGGCTGGTC.........................................................................................................19112.001201200000000
..............................................................................................................................................AGTCTCTCACATGGCTGGT..........................................................................................................19111.001101100000000
...............................................................................................................................................GTCTCTCACATGGCTGGTCTAG......................................................................................................22111.001101100000000
..............................................................................................................................................AGTCTCTCACATGGCTGGTCTAGCT....................................................................................................2518.0080800000000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGC...........................................................1818.0080800000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTC........................................................2218.0080100061000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.......................................................2317.0070300022000
..............................................................................................................................................AGTCTCTCACATGGCTGGTCTT.......................................................................................................2217.0070601000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT......................................................2416.0060400011000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGTT...........................................................1916.0060500010000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTAT.......................................................2216.0060600000000
..............................................................................................................................................AGTCTCTCACATGGCTGGTCTAGCA....................................................................................................2516.0060500100000
...............................................................................................................................................GTCTCTCACATGGCTGGTCT........................................................................................................2016.0060600000000
..............................................................................................................................................AGTCTCTCACATGGCTGG...........................................................................................................1815.0050500000000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTAA.......................................................2215.0050500000000
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA........................................................2315.0050110030000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA......................................................2414.0040100020001
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG........................................................2213.0030200010000
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCT..........................................................2113.0030101001000
...............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTTA........................................................2013.0030300000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTA.........................................................2113.0030100011000
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTAT.......................................................2413.0030200001000
..............................................................................................................................................AGTCTCTCACATGGCTGGTCC........................................................................................................2113.0030003000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTT......................................................2423.0060500010000
..............................................................................................................................................AGTCTCTCACATGGCTGGTCTAT......................................................................................................2313.0030300000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTAT......................................................2412.0020200000000
..............................................................................................................................................AGTCTCTCACATGGCTGGTCA........................................................................................................2112.0020200000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCC..........................................................2012.0020020000000
.................................................................................................................................................CTCTCACATGGCTGGTCTAG......................................................................................................2012.0020200000000
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGC...........................................................2012.0020101000000
................................................................................................................................................................................................CTGCCTTGTGAAGGGCTT.........................................................1812.0020200000000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTC........................................................2112.0020110000000
...............................................................................................................................................GTCTCTCACATGGCTGGT..........................................................................................................1812.0020200000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGA...........................................................1912.0020200000000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTTT.......................................................2212.0020200000000
..............................................................................................................................................AGTCTCTCACATGGCTGGTCTAGCTT...................................................................................................2612.0020200000000
...................................................................................................................................................CTCACATGGCTGGTCTAGC.....................................................................................................1912.0020200000000
.................................................................................................................................................................................................TGCCTTGTGAAGGGCTTAA.......................................................1911.0010100000000
...............................................................................................................................................GTCTCTCACATGGCTGGTCTTT......................................................................................................2211.0010100000000
..............................................................................................................................................AGTCTCTCACATGGCTGGTCTAGCC....................................................................................................2511.0010000010000
...............................................................................................................................................GTCTCTCACATGGCTGGTCTAGT.....................................................................................................2311.0010100000000
...............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTTAT.......................................................2111.0010100000000
...............................................................................................................................................GTCTCTCACATGGCTGGTCTA.......................................................................................................2111.0010100000000
......................................................................................................................................................................TGACTTGTT-TCT--AATATTGC..............................................................................2011.0010010000000
droPer2
AGTTTTTTT----------------------------------TTTT-----TTTTTTTTGAGT--------GAC-AAAGT-TCTGT-GAA-TT-CCCGC---------------CACAAAA-GAGAAACAAATTGTATGTGAGTCTCTCACATGGCTGGTCTAGCTGACTTGTT-TCT--AATACTGCTAGCTGCCTTGTGAAGGGCTTACGTGTTTTTGTAGCCCAAC-------------------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTT.........................................................21128972.0028972452017540701375210451
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA........................................................2213275.0032752160207662063264
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCT..........................................................201785.00785346214456327
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT........................................................221320.0032004904017655
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTT.........................................................201119.00119035011685
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.......................................................23163.0063013012353
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.......................................................23155.0055010012312
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGC...........................................................19152.005211015341
..............................................................................................................................................AGTCTCTCACATGGCTGGTCTAG......................................................................................................23149.00490413140
..............................................................................................................................................AGTCTCTCACATGGCTGGTCTAGC.....................................................................................................24146.00460359020
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGG............................................................18145.00450407277
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.......................................................23138.0038000101612
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTC........................................................22135.00350105290
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTT.........................................................22130.00300105177
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTC.........................................................21128.00280004222
..............................................................................................................................................AGTCTCTCACATGGCTGGTC.........................................................................................................20126.00260240020
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTA........................................................21123.00230140450
..............................................................................................................................................AGTCTCTCACATGGCTGGTCT........................................................................................................21121.00215150010
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT.......................................................23121.0021050493
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGT...........................................................19116.0016010249
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTG.........................................................21115.00150002130
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTA.........................................................21112.0012010191
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.......................................................23111.0011011261
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG........................................................22110.0010000181
...............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTT.........................................................1919.009020430
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA......................................................2418.008010160
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT......................................................2417.007010060
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTT........................................................2116.006030120
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGA...........................................................1915.005000014
................................................................................................................................................................................................CTGCCTTGTGAAGGGCTT.........................................................1814.004010021
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGT............................................................1814.004000040
..............................................................................................................................................AGTCTCTCACATGGCTGGTCTA.......................................................................................................2214.004040000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCA..........................................................2013.003000030
...............................................................................................................................................GTCTCTCACATGGCTGGTCTAG......................................................................................................2213.003030000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTG.......................................................2313.003000111
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCT..........................................................1913.003020010
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA........................................................2312.002000110
......................................................................................................................................................................TGACTTGTT-TCT--AATACTGC..............................................................................2012.002020000
droAna3
ATCCTGTTT----------------------------------TTTTTATT--TTT---TTT-----ATATTTAA-AAAGTG--A-TAAGAAATGTCC-----------------------T-AGGAAGTAATTTGTATGTCAGCCTCTCATTTGGCCTGCCTAGCTGACTTTAA-ATT--AATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGATTCAACT------------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTT.........................................................21128659.0028659952327934581004514093
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA........................................................2211822.001822283145527501492
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCT..........................................................201246.0024610010126316
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT........................................................221238.002385700527653
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTA.........................................................211182.0018210019090
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.......................................................231120.00120500343150
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTT.........................................................20196.009672007611
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTC.........................................................21196.009601055238
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTG.........................................................21182.008200026218
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.......................................................23166.0066300018711
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.......................................................23162.00622300171210
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG........................................................22145.004530018915
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGG............................................................18137.00376105223
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT.......................................................23131.00317009114
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTA........................................................21131.00312800210
..............................................................................................................................................AGCCTCTCATTTGGCCTGCCTAGC.....................................................................................................24130.00302640000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGC...........................................................19122.00222501401
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTT.........................................................22112.0012300621
...............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTT.........................................................1919.009400131
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA......................................................2418.008100601
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCT..........................................................1917.007700000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.......................................................2315.005100202
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTC........................................................2215.005000212
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT......................................................2415.005100031
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTT......................................................2414.004200011
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGT...........................................................1914.004100021
..............................................................................................................................................AGCCTCTCATTTGGCCTGCCTAG......................................................................................................2314.004310000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTG.......................................................2314.004000013
................................................................................................................................................................................................CTGCCTTGTGAAGGGCTT.........................................................1813.003200010
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTTT.......................................................2213.003300000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTAA.......................................................2213.003300000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTGT.......................................................2312.002000200
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTAT........................................................2212.002000101
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTAT.......................................................2212.002200000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTT........................................................2112.002200000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCG..........................................................2011.001000100
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTA......................................................2411.001100000
droBip1
ATTTTTTGT----------------------------------AT---------------------------TAA-AAAGTG--A-TTAGATTTGTCC-----------------------T-TGAAAGTAAATTGTATGTCAGCCTCTCATTTGGCCTGCCTAGCTGACTTTAA-ATT--AATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGATTCAACTTGAAA-------------------AATA--------SizeHit CountTotal NormTotal
No Reads
droFic1
TAATCCTT------------------------------------------------------------------------------------------TT---------------TATATAA-GTGAAGATAATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTGACTTCTGTTTA--AATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGCTCAACTGACTGAG--A-----------TAT---ATATATCCTSizeHit CountTotal NormTotal
No Reads
droEle1
------------------------------------------------------------------------------------------------------------------------------------ATTGTATGTCAGTTTTTCATTTGGCGTGACTAGCTGACTTTTGTTTA--AATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTGA----------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
CTTGTTTTT----------------------------------TTTT-------TGA-----------G-TTAAGT-GAATA--------T-TT---------------------G-GGAAA-GTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCGGGCCTAGCTGACTTCTGTTAA--AATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTG-----------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
------------------------------------------------------------------------------------------------------------------------------------ATCATATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTG-TTC--AATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGGTTGCGGCTCAACTG-----------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
GTTTCTT------------------------------------------------------------AG-TTCAA-AAAGT-TGA-TTAAATTT-CCCGCGGTT------T----GCAGAAT-GTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCTTGCCTAGCTGACTTCTGTTTA--AATATCGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCGGTTCAACTGGCAGG---A-------------T---GTGTGTC-CSizeHit CountTotal NormTotal
No Reads
droEug1
CTTGTTTTT----------------------------------CTTTTCTTTTTTTTTTTGAGTTTTGG-TTAAAT-GAGT-T-----GAA--T-TGCGCG---------T----TTGGAAA-GTGAAGTTAATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTGACCTTTGTTTA--AATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTGATTGCAGCTCAACTGGCAGG---A-------------TAAAT--------SizeHit CountTotal NormTotal
No Reads
dm3
TTGTTTTTT----------------------------------ATTT-------TT---------------------------T-GTTAAATTT-CCCGCG---------T----GTGAAAT-ACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCCTGGCTAGCTTACTCCTTTTTA--AATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACTCCCGAA---T--------------AATAAA------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTT.........................................................2117300070.0073000700000210004212229041930030441214508922329820124194180421522526513830417428328954014612661869079193168763123716625012314273313200000000000000000000042288103927383491521431634422951274636250287214343981210629727601201131532046338430001001000346619876614151105737723763738848488811632754830014891026377508431964861679327724101104527419195242051761349111381971213892966325111212321451131802704160143380200000271248131582201118953220628315355124486640380094587105123716224875995206246000014021549216263539492876511692411489332541116222925655112555865549792264012043548074163900184456655912997361725504834771330780525054130441139971086191418112493271133341319724222519350187027439225024351078835555981674656985615965069203528364216164223225782193794224578519729010181331173317576615271915239720555372192082839797413614862382136560152411552511368555575157671418277629256119191113545922559521692045171696250
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA........................................................221365806.0036580600002152330331026240071002254229407419721118178222152733544314442111193221483638293051423346109135504810000000000000000000221644021043812105322260620463661248522158431021621972112561282049194060309168132963913654220216027517283221000021000014797515612311632169664482216261101602106715158020584304088861130063561484248181941404243472347311305191166133852381114310538293000000142403080002233117170114132662575764157539635329634611325530394922590000110112615184147120559983786710524611113113361555681593147213544145748331142356215454099231813743135881293102721071700231133618954381502831184752968762340132837425616426214644445623700583732251193015381392446691898311181148723464212164103214411881485317435195179637514242431616232825226303149206661009736490
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCT..........................................................201140583.001405830000000000000000090032411015486010151100482917491222251223192943513175156000000000000000000000000000041361101010002002000554790501102050034600022402122325000000000047315602192116814006111000820295493127943147878104034105813018132029501583111614401916901000503000000620001003928396430524878158290000310023450036100006263206274103615100038101337612103140911376158723808641244056112018191861130729365581558855650112150147173176303642561292852061832122011969793855288717321070107269982543271143230920727593811108334227325179210938610614401157177371931730
..............................................................................................................................................AGTTTTTCATTTGGCCTGGCTAGC.....................................................................................................24122741.002274100003000040004002100000000101021201001000002030100001000010100000000000000000000015042470170203000175910013129013001043300760004426010000000400000000600000020100073352434450800014270310312031365151204650500000000000010000000000014612293235104725166239751510428086899435200000200512493937227635824056168121138842627212181645324519152210311537210105010152331391101931218113390031320003222443002120782187021824158911046210001270121125235390
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT........................................................22114710.001471000000010000001000170001180462000000000200224511811101400100000000000000000000000000010062042720313001519006516454334012330012510140000001028054130000000000522002012030312010000014351102188664196104074007410070342300077417962024000000001000000630000004323051975942788001400003400330000951287218816063936669113297411884418710460192111610347067353462403012070668576142893326253413171423682212282201336131283131798153143123887921420020694116112327011613422684611
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.......................................................23114518.001451800000000000001000000001002470000000033161113022211190015628000000000000000000000000000002000000000000000000001010000000000000000000000000000000352700643322010230000009056101130000310100020000225114000100021490000052000000268317220132613370000000012001800003501011732021594478878112221222057135352453293121023646457231313738394141104153885825101038232323412119926552371634142491418751011620614449380141602102286152221169371832321912069949013330
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGG............................................................18114230.001423000000000000000001000010102500000120010001000400120000000010000000000000000000000000000100000010010100201460030000001010100000111000010000004000051002650000000002942345116030010000000122016832211504010000010000002100100016814316162436860000000095118840000111212418461221151001615338950311871756138751707681112735036439220000010211164421251131122214223432273310001221127651271021129801744116111261153349151611193311443634210
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGC...........................................................19110317.0010317000000000000000002000203031901031011030021000101100031000000000000000000000000000000000030000000000000020428000000000001010000000000003000000513003110178000000000357389922143010111031012002514251480000000001000000630000002152041091315286600000000572458000017144772070186211151166486106282135419545151191127999448596464033121101059986109430232316117751410401002052721229103169244845595182932185720048151433200
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.......................................................2319378.0093780000100000001900010000010022000000001210021118191101017005000000000000000000000000002005528561044104480039290961271413021101019101800001021241131100000000002280434375187000200000118394238883750740510046210120230200022353211322501000140800000101000000228168804881528100901046800470000620943013610816041801966156311104920123810112383104466252215231263417092837449211516715134101211102822926111714479042065621736362345331230136521145151070663833542590
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTC.........................................................2118349.008349000010000000020000000000001900000000010000010001011100451510000000000000000000000000000001000000000000000000000100000000000000000000000100000000100010013300000000061173822000003002000000204821100000000000000000100000030322513242318000100006003000036144331101283122815438261571561968112404527824157141071391211440127621643211479805321699241433190132866103110258120942673235935510541411615191118413822701720
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTT.........................................................2217176.0071760000000000000000000000000013100000000000000101010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200201205702000000010010228011000120000000001046200001000001200000010000007810059041300000000100300002204247144144600272927634196282207515510553164214518106142001000501431001068121251162119551102290129159310538101932549756272417205719161314231006767732400
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTT.........................................................2016689.00668900000000000000000000000006242000000000000011000100001106717500000000000000000000000000000010000000000000000143410000000011000010000100000000000001001001155000000000150137914183901107101000100415281812000100000100000001000000155177132334200011001300000001013229685342119084752297068165313420312391211111991614121102353216141031078726321630400214071282180262357125913124735106685141736880757381870
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.......................................................2314602.00460200000100100002000300010000170000000021131013102132213360100000000000000000000000100009162036300230073610244042241881100311301500000000802500000000002021400116055620030000004501522426353801900610020408406212002802010003310000001840200002091085522442516300311015390028000068034147832421120106479603318571330012823447201277921101304493191184161459849227827824105141701144760620433821520322928483814882735031251110540
..............................................................................................................................................AGTTTTTCATTTGGCCTGGCTAG......................................................................................................2314164.00416400000000000000000000000000200000000000000000000000000021001000000000000000000000000025032000000200000000610200002002010010000010010000001000000000000080000231813817374001604702000201051200101110000000000000000000000007847210131014185722383394839200002202329561214011611271057031312411403711727731192660016041331215911313532226600102000142249301212169592145937326023030101713683891220
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTC........................................................2213041.0030410000000000000100000000000028000000000000013100100030100000000000000000000000000000000002030000000100000011103300000000004000000000262771200000000001000000010200000000009131112213100200200000000016142300000000002000001000000074424032170000000013001100004200444819830112045311152057852104103016518111862780200020235423111242336852050105032838100014541060645601113120200923442320
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTA.........................................................2112871.0028710000000000000100000000000214000000000001102013010002001140000000000000000000000000000000010000000000000001000000010000000000000000000000000001120007110538000000000806391121100000000010000054626000000000040000014002000120747310106000000003003000030015112739313110182772302142351103610315988719100421030114283617131289450004638110290613633840301213238012984027175302401426664740
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTG.........................................................2112857.0028570000000001000000010000000040000000100000000001000010011310000000000000000000000000000001000000000000000010000000000000000000100000000000000010000000009001000000301516171000000000001000211504400000000000000000000000043213501830000000000020000010043411612600115121401221026917513120107135543858210010014795719832525373540121208281051100133432810004650806320114130201001210524360
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG........................................................2212823.00282300000000001011000100000001500000000000101000200020002000000000000000000000000000000000110000000000000002120000010000000000000002000000000002100020000260000000007202440450500300001030020341510101001004000000000000046443907170000000040010000320431726550021912336611341731304038901410333874021101011026401282260233388111014047428220026737311029112604349783620252011201150
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.......................................................2312458.002458000000001000010000000000001000000000110100130000002510000441000000000000000000000000300910000001200020101781012200012002000000002040000000000021200230212100000000012041210514000054030002002016010110000000000000011000000715942715410001000011500140000120226452380180112451102615406110358827142974168210312037901047412113213411232461033460020218721011211213323300140210016112100590
...............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTT.........................................................1912331.002331000000000000000000000000006000000000000010011000000000000000000000000000000000000000000000000000001100010100000000000001000000000000000000000000000001700000000091003201000000001000000000047100000000000000000000000007410537110300000000000000005301092333000622224162302772340101710064422943001111001639632364200210582401023043130100113729312184741272634104015135610
..............................................................................................................................................AGTTTTTCATTTGGCCTGGCT........................................................................................................2111350.0013500000000000000000000000100100000000000000000000000010021000000000000000000000000001000000200000010000000000041301000000000000000000000000000000000000000040010129000000000000001010201000001000000000000000000000000030020000200150135225500001000042510040313201052120003139616117250000010011211020100000150000100008230001341201310010001000041616241550
................................................................................................................................................................................................CTGCCTTGTGAAGGGCTT.........................................................181909.00909000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000010013800000000013010162545010000000000000013655000000000000000000100000011378680041000000001002000011000163000106821206270010411615111040000000023210001200130166101001000523000020140001470040110000018210
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT.......................................................231766.007660000000010000000000000110030000000000000001030000100000000000000000000000000000000000010000000114000201453000000020050000000040650000000000000000000019000000000139075562401210620007060014301201000000000000000000000013122133500010000100201000000056800130510200022410000019404253130200000101626200212800108330100001203000017110201421076961024095813370
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGT...........................................................191696.0069600000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000700000000000020000000000000000000040000000000000000000000000061100130000000010010000011025112000020716211030600006414351241400000000058101111200001132010000012500001571013440172640022031607290
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA......................................................241671.006710000000000000000000010000010000000000011115200000021300000000000000000000000000000030030500000101000002001010001000000200000000003100000000003242201182952100000000002002301100400210200010000206000210000000000061000000081089253000100032003000010020251100100150000211100017201232115228152141701203100102000222581930121624110342120257317021211002358120
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT......................................................241535.00535000000000100000000000000001000000000000001001000000000100000000000000000000000000000001000000000000040014120000000001000000001011000000000000000000101500000000000000045040033020102000020120100000001000000000000001213904070001000040000000000002430000022100011210200062733316120002000032011011210001530020010270000203490012953071451110043134190
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTA........................................................211449.0044900000000000000000000000001120100000000000000000000000000000100000000000000000000000011010000000000000000300000000000060000000030100000000000000001000010000000003004011212301200115131122900105015000000000100000000000000369803020001000130010000010003540001001100042200011155514100000000063000010002004200000000008000025901016570210000000320130
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGA...........................................................191399.00399000000000000000000000000001000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100200000000000000000000110000000000000000000000000249001000000000800200000000111160002031210103010011711214114010000000002301010100011771000000311300013410140141106020010106564160
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA........................................................231296.002960000000000000000000000000000000000000000000000000011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000001602001001000000000020000000000000000000000008143001000000000100400001100015400010120000836201041821918000000000022001000005014900000000008001037700015181400300010112000
.................................................................................................................................................................................................TGCCTTGTGAAGGGCTT.........................................................171282.002820000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008211661327600000000000500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCG..........................................................201280.002800000000000000000000000000010000000100000000000000000010100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004101700100001000001000002401000000000000000000000000722000000000000000400000010010100000531010302000052401212000000010061101102213100001210000000102000010000000000000000004000
droSim2
ACATTTTTT----------------------------------TTTT--------T---------------------------T-GTTAAATTT-TCCGCG---------T----GTGAAAT-ACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGGCTAGCTCACTACTTTTTT--AATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCAACTGCCAAA---T--------------AATA--------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTT.........................................................2111324.001324170461517706401140749700000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA........................................................221285.00285815184273115301056701000
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCTAGC.....................................................................................................24185.008515321100001004301000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCT..........................................................20157.005717101406010117000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGC...........................................................19157.00579200528000013000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGG............................................................18140.00400000114000025000000
..................................................................................................................................................................................................GCCTTGTGAAGGGCTT.........................................................16138.0038000000000038000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTACG......................................................24117.0017000021500000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT........................................................22112.001200030000007002000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.......................................................2319.00900030001003020000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTT.........................................................2019.00900070100000100000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.......................................................2318.00800000010005001001
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCTAG......................................................................................................2317.00721100000000210000
..................................................................................................................................................................................................GCCTTGTGAAGGGCTTA........................................................1716.00600000000006000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTC.........................................................2115.00531000000001000000
.................................................................................................................................................................................................TGCCTTGTGAAGGGCTT.........................................................1714.00400000000004000000
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCT........................................................................................................2113.00320000000010000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.......................................................2313.00300001100001000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAGC......................................................2412.00220000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTG.........................................................2112.00210010000000000000
...................................................................................................................................................................................................CCTTGTGAAGGGCTT.........................................................1512.00200000000002000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCC..........................................................2012.00220000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA......................................................2412.00200000000100010000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTA.........................................................2112.00200000000002000000
...............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTT.........................................................1912.00200010000001000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.......................................................2312.00200000000001100000
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCTAA......................................................................................................2312.00200200000000000000
..............................................................................................................................................AGTTTTTCATTTGGCGTG...........................................................................................................1812.00200001100000000000
..............................................................................................................................................AGTTTTTCATTTGGCGTGGC.........................................................................................................2012.00200000100000100000
..................................................................................................................................................................................................GCCTTGTGAAGGGCTTT........................................................1721.50300000000003000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAA...............................................................1511.00100000000001000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAG..............................................................1611.00100000000001000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGA............................................................1811.00100000000001000000
..............................................................................................................................................AGTTTTTCATTTGGCGT............................................................................................................1711.00100000000001000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCG..........................................................2011.00110000000000000000
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCTAGG.....................................................................................................2411.00100000000000100000
.................................................................................................................................................................................................TGCCTTGTGAAGGGCTTT........................................................1811.00100000000001000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG........................................................2211.00100000000001000000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTA........................................................2111.00100010000000000000
......................................................................................................................................................................TCACTACTTTTTT--AATATT................................................................................1921.00200000200000000000
................................................................................................................................................................................................CTGCCTTGTGAAGGGCTT.........................................................1811.00100000000001000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTC........................................................2211.00100010000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGG.............................................................1711.00100000000001000000
...................................................................................................................................................................................................CCTTGTGAAGGGCTTA........................................................1611.00100000000001000000
....................................................................................................................................................TCATTTGGCGTGGCTAGC.....................................................................................................1811.00110000000000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGA...........................................................1911.00100010000000000000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGC...........................................................1811.00100000100000000000
droSec2
TTTTTTT------------------------------------------------T---------------------------T-GTTAAATTT-TCCGCG---------T----GTGAAAT-ACGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGGCTAGCTCACTACTTTTTT--AATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCAACTGCCAAA---T--------------AATA--------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTT.........................................................21124813.00248133526496110166949
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA........................................................2212542.0025421473801722293
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCTAGC.....................................................................................................241982.009822738804113
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCT..........................................................201138.001382136846
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT........................................................221120.001203145638
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGG............................................................18193.0093317811
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.......................................................23170.007033141310
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCTAG......................................................................................................23154.005429385
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.......................................................23140.0040881410
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGC...........................................................19140.004002353
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTT.........................................................22127.002733156
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTT.........................................................20126.002616172
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT.......................................................23124.002412804
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.......................................................23124.002406108
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCT........................................................................................................21119.00190568
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTC.........................................................21117.00170395
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT......................................................24114.00144505
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.......................................................23112.00122532
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTA........................................................21110.00107111
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTA.........................................................2117.0070331
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA........................................................2316.0061140
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG........................................................2216.0060321
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTC........................................................2215.0050212
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCTA.......................................................................................................2214.0040031
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCTAGCT....................................................................................................2514.0040040
...............................................................................................................................................GTTTTTCATTTGGCGTGGCTAGC.....................................................................................................2314.0043010
...............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTT.........................................................1913.0030021
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTG.........................................................2113.0031011
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTT......................................................2413.0031101
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCT..........................................................1913.0033000
..............................................................................................................................................AGTTTTTCATTTGGCGTGGC.........................................................................................................2013.0030030
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTACT......................................................2413.0030111
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTT........................................................2113.0032100
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA......................................................2412.0020020
................................................................................................................................................TTTTTCATTTGGCGTGGCTAGC.....................................................................................................2212.0021100
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCTAGCA....................................................................................................2512.0020020
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCTAGT.....................................................................................................2412.0020011
...............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTTA........................................................2012.0020020
..............................................................................................................................................AGTTTTTCATTTGGCGTG...........................................................................................................1812.0020002
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTTT.......................................................2212.0022000
.............................................................................................................................................CAGTTTTTCATTTGGCGTGGCTAGC.....................................................................................................2512.0020020
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTA.......................................................2312.0020200
................................................................................................................................................................................................CTGCCTTGTGAAGGGCTT.........................................................1811.0010100
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTACG......................................................2311.0010010
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTTA.......................................................2211.0011000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGCT...........................................................1911.0010010
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCGG.........................................................2111.0010001
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTAT.......................................................2211.0011000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAAA.....................................................2511.0010010
...............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTTAT.......................................................2111.0011000
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTAA.......................................................2411.0010010
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGT...........................................................1911.0010001
........................................................................................................................................................................................ATTGCTAGCTGCCTTGTGAAGGGCTTA........................................................2711.0010100
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCTT.......................................................................................................2211.0010001
.......................................................................................................................................................................................TATTGCTAGCTGCCTTGTGAAGGGCTTA........................................................2811.0010010
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCTGAT.....................................................................................................2411.0010010
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTACA......................................................2411.0010010
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCC..........................................................2011.0010001
..............................................................................................................................................AGTTTTTCATTTGGCGTGGCTAGCTCA..................................................................................................2711.0010010
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTA......................................................2411.0010001
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTACG......................................................2411.0010010
...........................................................................................................................................................................................GCTAGCTGCCTTGTGAAGGGCTTA........................................................2411.0010010
droYak3
AACATTTT------------------------------------TTT--------T-----------AG-TTTAAT-AAAT-TAA-T-G-ATTT-CCCGCG---------T----GTGAGAT-GTGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTTAGCTTTTTTTA--AATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGCAGTTCGACT------------------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTT.........................................................2119564.009564216082476631835395722330000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA........................................................2211136.001136116987771774501750000
..............................................................................................................................................AGTTTTTCATTTGGCGTGCCTAGC.....................................................................................................241161.001610315060110000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCT..........................................................201156.001561291010357010000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT........................................................221119.00119144711639110000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTT.........................................................20153.0053047003300000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.......................................................23141.00410000122180000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.......................................................23137.00370140021380000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.......................................................23131.0031017103910000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTC.........................................................21130.0030002201430000
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTT.........................................................22123.002302671250000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGC...........................................................19120.0020041301110000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTC........................................................22118.0018011041020000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTA........................................................21116.0016015100000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG........................................................22116.001601003930000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT.......................................................23114.001403002720000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGG............................................................18111.001100304220000
..............................................................................................................................................AGTTTTTCATTTGGCGTGCCTAG......................................................................................................2319.00904500000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTG.........................................................2117.00700102310000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.......................................................2317.00701210210000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT......................................................2415.00500000230000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTT........................................................2114.00404000000000
..............................................................................................................................................AGTTTTTCATTTGGCGTGCCT........................................................................................................2113.00301020000000
...............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTT.........................................................1913.00302000010000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCC..........................................................2013.00300300000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA......................................................2413.00300001110000
................................................................................................................................................TTTTTCATTTGGCGTGCCTAGC.....................................................................................................2213.00300300000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTA.........................................................2113.00301010010000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGT...........................................................1912.00201000100000
.............................................................................................................................................CAGTTTTTCATTTGGCGTGCCTAGC.....................................................................................................2512.00200200000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTT......................................................2412.00200000020000
...............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTTT........................................................2012.00202000000000
......................................................................................................................................................................TTAGCTTTTTTTA--AATATTGC..............................................................................2112.00200200000000
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCT..........................................................2112.00202000000000
...............................................................................................................................................GTTTTTCATTTGGCGTGCCTAGC.....................................................................................................2312.00202000000000
..............................................................................................................................................AGTTTTTCATTTGGCGTGCCTA.......................................................................................................2212.00201100000000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTTT.......................................................2211.00101000000000
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA........................................................2311.00100000100000
...............................................................................................................................................GTTTTTCATTTGGCGTGCCTAG......................................................................................................2211.00101000000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGAA..........................................................2011.00100000100000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGAC..........................................................2011.00100100000000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCT..........................................................1911.00101000000000
..........................................................................................................................................................................................TGCTAGCTGCCTTGTGAAGGGT...........................................................2211.00100000010000
.................................................................................................................................................TTTTCATTTGGCGTGCCTAGC.....................................................................................................2111.00100100000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTGA.......................................................2311.00100000100000
droEre2
AAACTATTT----------------------------------TTTT-------TAA-----------G-TTAAAT-AAATA--------A-TT-CCCGCG---------T----GTGAAAT-GTGAAGTTGATTGTATGTCAGTTTTTCATTTGGCGTGCCTAGCTTACCTCTTTTTA--AATATTGCTAGCTGCCTTGTGAAGGGCTTACGTGTAATTGTAGTTCGACTGCAAAA---T--------------TATA--------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTT.........................................................21139978.0039978181925471154313217196630
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTA........................................................2213801.003801646566854123611920
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCT..........................................................201427.004271142715332020
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTT........................................................221267.00267101135166630
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAT.......................................................231152.0015260027044210
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTT.........................................................201140.001408505116330
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAG.......................................................231107.001070021128570
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAA.......................................................231100.001005309017183
..............................................................................................................................................AGTTTTTCATTTGGCGTGCCTAGC.....................................................................................................24190.00903326101290
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGG............................................................18145.004530007350
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTA........................................................21141.004136010310
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTT.......................................................23136.0036150301170
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGC...........................................................19135.003524403220
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTC.........................................................21135.003501406240
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTT.........................................................22132.003270204190
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTATT......................................................24122.002250401120
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTG.........................................................21119.001910050220
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTG........................................................22117.001710501100
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTA.........................................................21112.00120041340
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTC........................................................22111.00111100540
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTAT.......................................................2218.0088000000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTT........................................................2118.0087000100
...............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTT.........................................................1918.0080010250
..............................................................................................................................................AGTTTTTCATTTGGCGTGCCTAG......................................................................................................2317.0072100040
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAC.......................................................2317.0070010150
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAA......................................................2416.0060000420
................................................................................................................................................................................................CTGCCTTGTGAAGGGCTT.........................................................1815.0050010400
..............................................................................................................................................AGTTTTTCATTTGGCGTGCCT........................................................................................................2115.0051000040
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCTTA........................................................2314.0043000010
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTAA.......................................................2214.0044000000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCT..........................................................1914.0044000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTG.......................................................2313.0032010000
...............................................................................................................................................................................................GCTGCCTTGTGAAGGGCTTA........................................................2013.0031010010
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAAA.....................................................2513.0032000010
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTTTT......................................................2312.0022000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCC..........................................................2012.0020100100
..............................................................................................................................................AGTTTTTCATTTGGCGTGCCTA.......................................................................................................2212.0020000020
..............................................................................................................................................AGTTTTTCATTTGGCGTGCC.........................................................................................................2012.0020000020
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTT......................................................2412.0021000010
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGA...........................................................1912.0020000110
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGT...........................................................1912.0020000020
...............................................................................................................................................GTTTTTCATTTGGCGTGCCTAG......................................................................................................2212.0022000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTACT......................................................2412.0021000100
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTAAT......................................................2412.0020010100
............................................................................................................................................................................................CTAGCTGCCTTGTGAAGGGCT..........................................................2111.0011000000
................................................................................................................................................TTTTTCATTTGGCGTGCCT........................................................................................................1911.0010000010
...........................................................................................................................................................................................GCTAGCTGCCTTGTGAAGGGCTT.........................................................2311.0011000000
..............................................................................................................................................AGTTTTTCATTTGGCGTG...........................................................................................................1811.0011000000
..............................................................................................................................................................................................AGCTGCCTTGTGAAGGGCTTAG.......................................................2211.0011000000
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTTA......................................................2411.0010000100
.............................................................................................................................................................................................TAGCTGCCTTGTGAAGGGCTTTA.......................................................2311.0010000100

Generated: 10/20/2015 at 10:12 PM