ID:

dgr_233

 Coordinate:

scaffold_15074:1378994-1379092 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-5.5 -5.0 -5.0

Flybase annnotation

exon [dgri_GLEANR_544:2]; exon [dgri_GLEANR_544:3]; CDS [Dgri\GH21262-cds]; CDS [Dgri\GH21262-cds]; intron [Dgri\GH21262-in]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey+
(CAG)nSimple_repeatSimple_repeat+
mature
  1. scaffold_14853:4318768-4318792 +
  2. scaffold_14853:6745229-6745253 +
  3. scaffold_14853:6868456-6868480 +
  4. scaffold_14906:8040721-8040745 +
  5. dgr_233  scaffold_15074:1379040-1379064 +
  6. dgr_233  scaffold_15074:1379076-1379100 +
  7. scaffold_15081:1294011-1294035 +
  8. scaffold_15110:21452257-21452281 +
  9. scaffold_15203:3409487-3409511 +
  10. scaffold_15203:11298160-11298184 +
  11. scaffold_15252:10508275-10508299 +
  12. scaffold_15252:11112917-11112941 +
star
  1. scaffold_1681:1035-1055 +
  2. scaffold_2357:660-680 +
  3. scaffold_13794:3562-3582 +
  4. scaffold_14585:8432-8452 +
  5. scaffold_14585:8471-8491 +
  6. scaffold_14624:3741814-3741834 +
  7. scaffold_14853:6745242-6745262 +
  8. scaffold_14906:8342051-8342071 +
  9. dgr_233  scaffold_15074:1379020-1379040 +
  10. scaffold_15081:3608923-3608943 +
  11. scaffold_15110:13591011-13591031 +
  12. scaffold_15110:17609072-17609092 +
  13. scaffold_15126:1353965-1353985 +
  14. scaffold_15126:3444237-3444257 +
  15. scaffold_15126:5210013-5210033 +
  16. scaffold_15203:8166510-8166530 +
  17. scaffold_15203:8769716-8769736 +
  18. scaffold_15203:11298185-11298205 +
  19. scaffold_15245:1313599-1313619 +
  20. scaffold_15252:13870275-13870295 +

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------##################################################
ACTTTAATCCAACAACAACAGCGGCAAACAAAACGTTATTTGTAACGCAGGCAGCAGCAGCAGCACAGCAACAACAACAGCAGCAACAACAGCAACAACAGCAGCAACAACAGCAGCAACAACAGCAGCAACAACAGCAGCAACAACAGCAGCAACAACTACAGCAACAACAGCAGCAACAACAGCAGCAGCAGCAACA
****************************************************************************........................((.((.......((.((.......)).)).......)).))....****************************************************** 		Read size # Mismatch Hit Count Total Norm Total M041
female body
.........................................................................................................................................................................ACAGCAGCAACAACAGCAGCAGCA...... 24 0 20 0.10 2 2
.................................................................................................................................................................................AACAACAGCAGCAGCAGCAACA 22 0 20 0.10 2 2
........................................................................................................................AACAGCAGCAACAACAGCAGCAACA...................................................... 25 0 20 0.05 1 1
....................................................................................................................................AACAGCAGCAACAACAGCAGCAACA.......................................... 25 0 20 0.05 1 1
................................................................................................AACAGCAGCAACAACAGCAGCAACA.............................................................................. 25 0 20 0.05 1 1
............................................................................................................AACAGCAGCAACAACAGCAGCAACA.................................................................. 25 0 20 0.05 1 1
......................................................................................................................................................................ACAACAGCAGCAACAACAG.............. 19 0 20 0.05 1 1
.......................................................................................................GCAACAACAGCAGCAACAACA........................................................................... 21 0 20 0.05 1 1
............................................................................ACAGCAGCAACAACAGCAACA...................................................................................................... 21 0 20 0.05 1 1
..............................................................................................ACAACAGCAGCAACAACAG...................................................................................... 19 0 20 0.05 1 1
...................................................................................................................................CAACAGCAGCAACAACAGCA................................................ 20 0 20 0.05 1 1

Anti-sense strand reads

TGAAATTAGGTTGTTGTTGTCGCCGTTTGTTTTGCAATAAACATTGCGTCCGTCGTCGTCGTCGTGTCGTTGTTGTTGTCGTCGTTGTTGTCGTTGTTGTCGTCGTTGTTGTCGTCGTTGTTGTCGTCGTTGTTGTCGTCGTTGTTGTCGTCGTTGTTGATGTCGTTGTTGTCGTCGTTGTTGTCGTCGTCGTCGTTGT
******************************************************........................((.((.......((.((.......)).)).......)).))....**************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droGri2 scaffold_15074:1378944-1379142 + dgr_233 AC-TTTA--ATCC-AACAA---CAACAGCGGC---AAACAA------AA--------CGTTA------T---TTGTAACGCAGGCAG-------------CAGCAGC--AGCA-------------C------------AGCAACAACAACAG---------CAGCAACAA---CAGCAACAACAGCAGCAACAACAGCA---GCAACAACAGCAGCAAC---------AACAGCAGCAACA------ACAGCAGCAACAACTA-------CAGCAACAACAGCAGCAACAACAGCAGCAGCAGCAACA-
droVir3 scaffold_12855:891560-891738 - ------------C-AGCAA---CAACAGCAGC---AACAAC------AACAG-----CAA---C------AACA---------ACAG-------CA---GC---A--------------------AC------------AACAGCAGCAACAACAGCAG---CAGCAACAA---------CAGCAACAACAGCAGCAACA---ACAACAGCAGCAGCTAC---------ATCAGCAACAACA------ACAGCAACAACAACAG-------CAACAACAACAGCAGCAACAACAGCAGCAGCAGCAGCT-
droMoj3 scaffold_6496:19026966-19027156 + ------------C-AACAG---CAGCAGCAGC---AACAGC------AGCAGC--AGCAGCAGC------AACA---------GCAG-------CA---TC---A--GCAGCA------------GC------------AGCAGCAACAACAG---------CAGCAGCAA---CAGCAACAGCAGCAGCAACAACAGCA---GCAGCAGCAACAGCAGC---------AGCAGCAGCAGCA------ACAGCAGCAACAGCAG-------CAACAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAACA-
droWil2 scf2_1100000004888:1009849-1010033 - ------------C-AACAA---CAACAGCAGC---AGCAAC------AACAA-----CAG---CAGCAACAACA---------GCA-------------GC---A-----GCA------------GC------------AACAGCAACAACAG---------CAGCAGCAA---CAACAACAGCAGCAACAACAACAGCA---GCAGCAGCAACAGCAAC---------AACAGCAGCAGCA------ACAACAACAGCAGCAA-------CAACAACAGCAGCAGCAACAACAGCAACAGCAACAACA-
dp5 XR_group6:12701955-12702149 + AA-TTCACGGT-C-AACAG---CAGCACCAGC---AACAGC------AGCAA-----CAGCAGC---ATCAGCA---------GCAG-------A---------A-----GCA------------GC------------AGCAGCAACAGCAG---------CAACAGCAG---CAGCAGCAGAAGCAGCAGCAGCAACA---GCAGCAACAGCAGCAGC---------AACAGCAGCAGCA------GCAACAGCAACAACAG-------CAGCAGCAACAGCAGCAGCAACAGCAGCAGCAACAGCA-
droPer2 scaffold_0:8271611-8271796 - C-----------C-CGCAA---CAGCAGCAGC---AAATGC------AACAG-----CAGCAGC---AAAT------------GCA-------------GCAACA-----GCA------------GCA---AC------AG---CAACAACAG---CAG---CAAATGCAG---CAGCA---ACAGCAACAGCAGCAAAT---GCAGCAACAGCAGCAGC---------AGCAGCAACAGCA------GCAACAACAGCAACAA-------CAGCAACAACAGCAGCAACAACAGCCGCAACAACAGCA-
droAna3 scaffold_13248:2270644-2270832 - dan_4064 G-----------C-AGCAG---AAACAGCAGG------CAG------AG--------CAGGAGC------GACG---------GCAGCA----------GC---AGC--AGCC------------AC------------AGCAGCAACAGCAG---------CAGCAGCAA---CAGCAACAGCAACAGCAACAGCAGCA---GCAACAGCAGCAGCAAC---------AGCAGCAGCAGCCACAGCAGCAGCAACAGCAGCAA-------CGACAGCAGCAGCAGCAACGTCAGCAGCAGCAGCAACG-
droBip1 scf7180000396362:640643-640832 + A-----------G-AACAA---CAACAACAAC---AA---C------AACAAAATTACAACAA-------AATT---------ACA-------------ACAACAAG--AAGA------------AG------------AACAACAACAACAA---------CAACAACAA---CAACAACAAGAACAACAACAACAACA---ACAACAACAACAACAAC---------AACAACAACAACA------ACAACAACAACAACAA-------CAACAACAACAACAACAACAACAACAACAACAACAACA-
droKik1 scf7180000302685:196203-196400 + TTC---A--ATTC-ATCAA---CAGCAGCAGC---A---GC------AACAA-----CAA---C---AGCATCT---------ACAG-------CA---GC---A-----GCA------------ACA---AC------AGCATTTACAGCAG---------CAGCAACAA---CAGCATTTACAGCAGCAGCAGCATTT---ACAG---CAGCAGCAACAACAGCATCTACAGCAGCAGCA------ACAACAGCATTTACAG-------CAGCAGCAGCAGCAGCATTTACAGCAGCAGCAGCAACA-
droFic1 scf7180000453829:1092977-1093173 + TT----G--AT-CAAGCAG---CAGCAGCAGCAACGGCAGC------AACTG-----CAGCAGC------AGCA---------ACTG-------CAGCAGC---A-----ACA------------AC------------AGCAGCAGCAACAA---------CAGCAGCAA---CAACAGCAGCAGCAACAGCAACAGCA---GCAACTACAACAACAAC---------AGCAGCAACAGCA------GCAGCAACAACAGCAA-------CAGCAGCAACTACAACAACAACAGCAGCAGCAGCAGCA-
droEle1 scf7180000491006:114771-114963 - A--------------ACAACAACAGCAGCAGC---AGGAGC------AACAA-----CATGAGC---AACAACT---------GCA-------------CC---A-----GCA------------GG------------AGCAACAACATCAG---------CAACAACAG---CAGCAACAACATGAGCAACAACAGCA---GCAACAACAGCAGCAAC---------AACAGCAGCAACA------ACATGAGCAACAACAGCAGCAAC-AACATGAACAACAACAGCAGCAACAACATGGGCAACA-
droRho1 scf7180000760202:71823-72023 + A-----------C-AGCAG---CAACAACAGCAGCAGCAAC------AACAA-----CAG---C---AG------------------CAGCAAC----AAC-----------AGCAGCAG---CAACA---ACAGCAGCAGCAACAACAACAG---------CAGCAGCAA---CAACAGCAGCAGCAACAACAACAGCA---GCAGCAACAACAACAGC---------AGCAGCAACAACA------GCAGCAGCAACAACAG-------CAGCAACAGCAACAACAACAACAGCAGCAACAGCAACA-
droBia1 scf7180000302088:28853-29040 - ------------C-GACAA---CAGCAACAAC---AGTTTA------GG--------CATCAT---------GTGCAA---ATACA-------------ACAGCAGC--AACA------------AA------------AGCAACAACAACAG---------CAGCAGCAG---CATCAGCAACAACAACAACAACAACA---ACAGCAACAGCAGCAAC---------AGCAACAGCAACA------GCAGCAGCAACAACAG-------CAGCAACAACAACAACAACAGCAGCAGCAGCAGCAGCA-
droTak1 scf7180000414445:283377-283555 + ------------C-AGCAG---CAGCAGCAGC---AAAATA------TGCAT-----CAT---C------ACCA---------ACAG-------CAGCAGC---A-----GCA------------CCA---AC------AA---CAGCAGCAG---------CAGCATATG---------CAACAGCAGCAGCAACACCA---ACAGCAGCAGCAACAAC---------ATCAACAGCAGCA------GCAGCAACATCAACAG-------CAGCAGCAGCAGCATCAACAACAGCAGCAGCAACAACA-
droEug1 scf7180000409524:214450-214640 + ------------C-ATCAA---CAGCAGCAGC---AGCAGC------AACAGA--ATATGCATC------ATCA---------TCAA-------CA---GC---A--GCAGCA------------GC------------ATCAACAACAACAG---------CAGCAGCAG---CAGCATATGCAACAGCATCAGCAGCA---GCATCAACAGCAGCAGC---------ATCAACAGCAACA------TCAACAGCAACAGCAT-------CAACAGCAGCAGCAACAACATCAGCAGCAGCAGCAACA-
dm3 chr3L:14020790-14020972 - A-----------C-AA------AAGCAGCAG------GCTA------CG--------CAGCAGC---AACAAAT---------TCA-------------GCAGCA-----GCA------G---CAAT------------TGCAGCACCAACAC---------CAGATGCAG---CAACAACAGCAGCAGCAGCAGCAGCA---GCAACAACAACAACAAC---------AACAACAACAACA------ACAACAACAACAACAA-------CAACAACAGCAGCAGCAGCAGCAGCAGCAACATCAACA-
droSim2 3l:8237015-8237209 - C-----------C-AGCAG---CAGCAGCAGC---AG---CAGCATCAACAA-----CAA---C---AG-------------------------------C---A--GCAGCA------GCAGCAGCAGCAGC------AA---CAACATCAG---CAGAATATGCATCAC---CATCA---ACATCAGCAGCAACACATGCAGCAGCAGCAGCAACAAC---------AACAACATCAGCA------GCAGCAGCAGCAACAA-------CAACAACATCAGCAGCAGCAACACCAACAGCAGCAGCA-
droSec2 scaffold_4:2908058-2908247 + T-----------CGAGCAG---CATCAGCCGC---ACCAGT------CG--------CATCAGC------AACA---------TCAG-------CA---GC---A--GCAGCT------G---CAGC------------ATCAGCAGCAG------------CAGCAGCTGCAGCATCAGCAGCAGCAGCAACATCAGCA---GCAACAAAATCAGCAGC---------AGCAGCAGCTACA------ACAGCAACATCAGCAG-------CAGCAACAGCTGCAGCATCAGCAGCAGCATCAGCAGCA-
droYak3 3R:18798183-18798374 + ------------C-AGCAG---CAACAGCAGC---AACAGC------AGCAG-----CAA---CAGCAGCAACA---------ACAG-------CA---GC---A--GCAGCA------------GC------------AACAGCAGCAACAT---------CAGCAACAA---CAGCAACAACAGCAGCAGCAACAGCA---ACAACAGCAAAAGCAGC---------AACAGCAGCAACA------ACAGCAGCAACAGCAG-------CAACAACAGCAACAGCAGCAACAGCAGCAGCAGCAGCAA
droEre2 scaffold_4690:5954346-5954544 + AAC-AGT--AT-C-AGGAG---AAGCAAAAGCTAATGCTGC------AGCAA-----CAG------------------------CAGCAGCAAC----AGC-----------AGCAGCAA---CAAC------------AGCAGCTGCAGCAG---------CAGCAACAA---CAGCAGCTACAGCAGCAGCAACAACA---GCAGCTGCAGCAGCAGC---------AACAACAGCAGCT------GCAGCAGCAACAACTG-------CAGCAGCAACTGCAACAACAGCAGCTGCAACTGCAACA-

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droGri2
AC-TTTA--ATCC-AACAA---CAACAGCGGC---AAACAA------AA--------CGTTA------T---TTGTAACGCAGGCAG-------------CAGCAGC--AGCA-------------C------------AGCAACAACAACAG---------CAGCAACAA---CAGCAACAACAGCAGCAACAACAGCA---GCAACAACAGCAGCAAC---------AACAGCAGCAACA------ACAGCAGCAACAACTA-------CAGCAACAACAGCAGCAACAACAGCAGCAGCAGCAACA-SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................................................................................................................................................................................................................................................................................ACAGCAGCAACAACAGCAGCAGCA.......24200.10220
...............................................................................................................................................................................................................................................................................................AACAACAGCAGCAGCAGCAACA-22200.10220
................................................................................................................................................................................................................AACAGCAGCAAC---------AACAGCAGCAACA------..............................................................25200.05110
.....................................................................................................................................................................................................................................AACAGCAGCAACA------ACAGCAGCAACA..................................................25200.05110
.....................................................................................................................................................................................AACAGCAGCAACAACAGCA---GCAACA.....................................................................................................25200.05110
.................................................................................................................................................................................................AACAGCA---GCAACAACAGCAGCAAC---------A................................................................................25200.05110
....................................................................................................................................................................................................................................................................................ACAACAGCAGCAACAACAG...............19200.05110
............................................................................................................................................................................................GCAACAACAGCA---GCAACAACA..................................................................................................21200.05110
.....................................................................................................................................................ACAG---------CAGCAACAA---CAGCAACA................................................................................................................................21200.05110
...................................................................................................................................................................................ACAACAGCAGCAACAACAG................................................................................................................19200.05110
...........................................................................................................................................................................................................................C---------AACAGCAGCAACA------ACAGCA........................................................20200.05110
droVir3
------------C-AGCAA---CAACAGCAGC---AACAAC------AACAG-----CAA---C------AACA---------ACAG-------CA---GC---A--------------------AC------------AACAGCAGCAACAACAGCAG---CAGCAACAA---------CAGCAACAACAGCAGCAACA---ACAACAGCAGCAGCTAC---------ATCAGCAACAACA------ACAGCAACAACAACAG-------CAACAACAACAGCAGCAACAACAGCAGCAGCAGCAGCT-SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................GCAGCAACA---ACAACAGCAGCAGC.............................................................................................23200.204003100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................AACAGCAGCAACA---ACAACAGCA..................................................................................................22200.153001000000000001000000000000000100000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................CAACAACAGCAGCAGCAGCAGCT-23100.101000000000000010000000000000000000000000000000000000000000000000
............................................................................................................................................ACAGCAGCAACAACAGCAG---CAGCAACAA---------..................................................................................................................................28100.101000000000000000000000010000000000000000000000000000000000000000
...............................................................................................................................................GCAGCAACAACAGCAG---CAGCAACAA---------CAGC..............................................................................................................................29100.101001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................GCAACA---ACAACAGCAGCAGC.............................................................................................20200.102002000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................AACAACAGCAGCAGCAGCA....19200.102000000000000000000000000000000000000000000000000000000000000020
...........................................................................................................................................AACAGCAGCAACAACAGCAG---CAGCAACA............................................................................................................................................28190.051000000000000000000000000000000000001000000000000000000000000000
......................CAACAGCAGC---AACAAC------AACAG-----.............................................................................................................................................................................................................................................................21200.051000000000000000000000000000010000000000000000000000000000000000
..............................................................................................................................................AGCAGCAACAACAGCAG---CA..................................................................................................................................................19200.051000000000000000000001000000000000000000000000000000000000000000
.....................................CAAC------AACAG-----CAA---C------AACA---------ACAG-------CA---GC---..............................................................................................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................AACAACAGCAG---CAGCAACAA---------CAGC..............................................................................................................................24200.051000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................G---CAGCAACAA---------CAGCAACAACAGCAGCC.................................................................................................................27200.051000000000000000000100000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................ACAGCAACAACAACAG-------CAACAA.................................22200.051000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................................................................................AACAACAACAGCAGCAACAACAGCA.............25200.051000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................CAACAGCAGCAACA---ACAACAGC...................................................................................................22200.051000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................CAACAGCAGCAACA---ACAACAG....................................................................................................21200.051000000000000000000000000000010000000000000000000000000000000000
..........................................................AA---C------AACA---------ACAG-------CA---GC---A--------------------AC------------AACAGCA....................................................................................................................................................................25200.051000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................ACA------ACAGCAACAACAACAG-------CA.....................................21200.051000000000000000000000100000000000000000000000000000000000000000
.............................................................................................................................................................................................CAGCAGCAACA---ACAACAGCAGC................................................................................................22200.051000000000000000000000000000000000001000000000000000000000000000
..................................................AG-----CAA---C------AACA---------ACAG-------CA---GC---A--------------------AC------------AACAGC.....................................................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................CAGCAACAACAGCAGCAGCAGCAG...24200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................AACAACAGCAG---CAGCAACAA---------CAGCAAC...........................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
.................AA---CAACAGCAGC---AACAAC------AACAG-----CA...........................................................................................................................................................................................................................................................25200.051000000000000000000000000000000001000000000000000000000000000000
................................................................................................................................................................................................................................................................AACAACAG-------CAACAACAACAGCAGC.......................24200.051001000000000000000000000000000000000000000000000000000000000000
............C-AGCAA---CAACAGCAGC---AACAAC------.......................................................................................................................................................................................................................................................................22200.051000000000000000000000000000010000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................GCAGCAACAACAGCAGCAGCAGCAGC..26200.051001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................AGCAACAACAACAG-------CAACAA.................................20200.051000000000000001000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................AGCAACAACAGCAGCAGCAGCA....22200.051000000000000000000000000000000000000000000000000000000000000100
....................................................................................................................................................................................CAGCAACAACAGCAGCAACA---...........................................................................................................20200.051000000000000000100000000000000000000000000000000000000000000000
.........................................................................................................................................................................AA---------CAGCAACAACAGCAGCAAC...............................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................CAACAACAG-------CAACAACAACAGCAGC.......................25200.051001000000000000000000000000000000000000000000000000000000000000
......................CAACAGCAGC---AACAAC------AACAG-----C............................................................................................................................................................................................................................................................22200.051000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................AGCAACAACAGCAGCAGCA.......19200.051000000000000010000000000000000000000000000000000000000000000000
........................................................................................................................................................ACAGCAG---CAGCAACAA---------CAGCAAC...........................................................................................................................23200.051000000000000000000000000100000000000000000000000000000000000000
........................................................................................................................................................................................AACAACAGCAGCAACA---ACAACAGCA..................................................................................................25200.051000000000000000000000000000000001000000000000000000000000000000
................................................................................................................................................................................................................................................................................................ACAACAGCAGCAGCAGCA....18200.051000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................................................................................................AACAGCAGCAACA---ACAACAGCAGCAGC.............................................................................................27200.051000100000000000000000000000000000000000000000000000000000000000
..........................AGCAGC---AACAAC------AACAG-----C............................................................................................................................................................................................................................................................18200.051000000000000000001000000000000000000000000000000000000000000000
.......................AACAGCAGC---AACAAC------AACAG-----CA...........................................................................................................................................................................................................................................................22200.051000000000000000000000000000000100000000000000000000000000000000
.................................................................................................................................................AGCAACAACAGCAG---CAGCAACAA---------CA................................................................................................................................25200.051001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................ACAGCAG---CAGCAACAA---------CAGCAA............................................................................................................................22200.051000000000000000000010000000000000000000000000000000000000000000
...............................................................................................A---GC---A--------------------AC------------AACAGCAGCAACAAC............................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................CAGCAACAACAGCAGCAGCA.......20200.051000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................CAG-------CAACAACAACAGCAGCAACAACAGC..............28200.051001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................AG-------CAACAACAACAGCAGCAACAACAGC..............27200.051001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................CAG-------CAACAACAACAGCAGCAA.....................21200.051000000000000000000000000000000000000000000000000000000000000010
.....................................................................................AG-------CA---GC---A--------------------AC------------AACAGCAGCA.................................................................................................................................................................19200.051000000000000000000001000000000000000000000000000000000000000000
............................................................................................................................................................CAG---CAGCAACAA---------CAGCAACAAC........................................................................................................................22200.051000000000000000000000100000000000000000000000000000000000000000
.................................................CAG-----CAA---C------AACA---------ACAG-------CA---GC---A--------------------AC------------AACAGC.....................................................................................................................................................................28200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................AGCAACAACAGCAG---CAGCAA..............................................................................................................................................20200.051000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................CAGCAGCAACAACAGCAG---C...................................................................................................................................................19200.051000000000000000000000000001000000000000000000000000000000000000
.................................................CAG-----CAA---C------AACA---------ACAG-------CA---GC---A--------------------A........................................................................................................................................................................................21200.051000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................AGCAGCAACA---ACAACAGCAGCAGC.............................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
.................AA---CAACAGCAGC---AACAAC------.......................................................................................................................................................................................................................................................................18200.051000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................AGCAGCAACAACAGCAGCA..........19200.051000000000000000000001000000000000000000000000000000000000000000
droMoj3
------------C-AACAG---CAGCAGCAGC---AACAGC------AGCAGC--AGCAGCAGC------AACA---------GCAG-------CA---TC---A--GCAGCA------------GC------------AGCAGCAACAACAG---------CAGCAGCAA---CAGCAACAGCAGCAGCAACAACAGCA---GCAGCAGCAACAGCAGC---------AGCAGCAGCAGCA------ACAGCAGCAACAGCAG-------CAACAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAACA-SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
............................................................................................................................................................................................................................................................CAGCAACAGCAG-------CAACAGCAGC.............................22200.255000050
....................................................................................................................................................AACAG---------CAGCAGCAA---CAGCAA..................................................................................................................................20200.153300000
.........................................................................................................................................................................................GCAGCAACAACAGCA---GCAGCAGC...................................................................................................23200.153000030
..............................................................................................................................................................................................AACAACAGCA---GCAGCAGCA..................................................................................................19200.153300000
...........................................................GCAGC------AACA---------GCAG-------CA---TC---A--GCAGCA------------GC------------...........................................................................................................................................................................2680.131000010
....................................................................................................................................................AACAG---------CAGCAGCAA---CAGCA...................................................................................................................................19200.102200000
...........................................................................................................................................................................................................GCAGCAGCAACAGCAGC---------AGCAGC...........................................................................23200.102200000
.............................................................................................................................GC------------AGCAGCAACAACAG---------CAGC................................................................................................................................................20200.102200000
................................................................................................................................................................................................................................................................................AACAGCAGCAGCAGCAGCAAC.................21200.102000020
............................................................................................................................................................................................................................................GCAGCA------ACAGCAGCAACAGCAG-------CAAC...................................26200.102000002
....................................................................................................................................................................GCAGCAA---CAGCAACAGCAGCA..........................................................................................................................21200.102200000
........................................................................................................................................................................................AGCAGCAACAACAGCA---GCAGC......................................................................................................21200.102200000
........................GCAGCAGC---AACAGC------AGCAGC--AGC............................................................................................................................................................................................................................................................23200.102200000
....................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGCAACAGC..............20200.102200000
...................................................................................................................................................................................................................................................................AGCAG-------CAACAGCAGCAGCAGC.......................21200.102000020
.......................................................................................................................................................AG---------CAGCAGCAA---CAGCAACA................................................................................................................................19200.102000200
................................................................................................................................................................................................CAACAGCA---GCAGCAGCAACAGC.............................................................................................22200.051100000
...............................................AGCAGC--AGCAGCAGC------AACA---------GC.................................................................................................................................................................................................................................21200.051100000
................................................................................................................................................................................................................................................................AACAGCAG-------CAACAGCAGCA............................19200.051001000
..........................................................................................................................................................................................................................................CAGCAGCA------ACAGCAGCAACA..................................................20200.051100000
...........................................................GCAGC------AACA---------GCAG-------CA---TC---A--GCA........................................................................................................................................................................................................21200.051000010
...................................................................................................................................................................................................................................................................AGCAG-------CAACAGCAGCAGCAGCAGCAACA................28200.051100000
......................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAACAGCAGCAGC........24200.051100000
........................................................................................................A--GCAGCA------------GC------------AGCAGCAACAACAG---------....................................................................................................................................................23200.051000010
.........................................................................................................................................................................AA---CAGCAACAGCAGCAGCAACAACA.................................................................................................................25200.051100000
........................................................................................................................................................................CAA---CAGCAACAGCAGCAGCAACA....................................................................................................................23200.051000010
.............................................................................................................................................CAGCAACAACAG---------CAGCAGCAA---CAGC....................................................................................................................................25200.051100000
........................................................................................................................................................................................................................................AGCAGCAGCA------ACAGCAGCAACAGC................................................24200.051100000
...............................................................................................................................................................................AGCAACAGCAGCAGCAACAACAGCA---GC.........................................................................................................27200.051000010
...............................................................................................................CA------------GC------------AGCAGCAACAACAG---------CAGCA...............................................................................................................................................23200.051010000
..........................AGCAGC---AACAGC------AGCAGC--AGCA...........................................................................................................................................................................................................................................................22200.051100000
...............................................................................................................CA------------GC------------AGCAGCAACAACAG---------CAGCAG..............................................................................................................................................24200.051100000
................................................................................................................................................CAACAACAG---------CAGCAGCAA---C.......................................................................................................................................19200.051100000
...................................................................................GCAG-------CA---TC---A--GCAGCA------------GC------------AGCA.......................................................................................................................................................................21200.051000001
..............................................................................................................................................AGCAACAACAG---------CAGCAGCAA---CAGC....................................................................................................................................24200.051100000
...................................................................................GCAG-------CA---TC---A--GCAGCA------------GC------------AGC........................................................................................................................................................................20200.051100000
..................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAGCAACA-19200.051010000
......................................................................................................................................................................AGCAA---CAGCAACAGCAGCAGCAACA....................................................................................................................25200.051000010
.............................................................................................................................................................................................................AGCAGCAACAGCAGC---------AGCAGCA..........................................................................22200.051100000
............................................................................................................................................................................................................................................................CAGCAACAGCAG-------CAACAGCAGCAGCAG........................27200.051100000
..............AACAG---CAGCAGCAGC---AACA...............................................................................................................................................................................................................................................................................19200.051010000
.........................................................................................................................................................................................................................AGC---------AGCAGCAGCAGCA------ACAGC.........................................................21200.051100000
............................................................................................................................................................................................GCAACAACAGCA---GCAGCAGCAACA...............................................................................................24200.051000010
.................................................................................................................................................................................................................................................................................ACAGCAGCAGCAGCAGCAACAGCA.............24200.051100000
....................................................................................................................................................................................................................................................................................GCAGCAGCAGCAGCAACAGCA.............21200.051001000
.......................................................................ACA---------GCAG-------CA---TC---A--GCAGCA------------GC------------...........................................................................................................................................................................20200.051100000
......................................................................................................................................................................................................CA---GCAGCAGCAACAGCAGC---------AGC..............................................................................22200.051100000
..............................................................................................................................................................................CAGCAACAGCAGCAGCAAC.....................................................................................................................19200.051001000
...............................................................................................................................................................................AGCAACAGCAGCAGCAACAACA.................................................................................................................22200.051000010
......................................................................................................................................................................................................................................................................AG-------CAACAGCAGCAGCAGCAGCAAC.................24200.051100000
................................................................................................................................................................................................................................................................AACAGCAG-------CAACAGCAGCAGCAGCAGC....................27200.051100000
droWil2
------------C-AACAA---CAACAGCAGC---AGCAAC------AACAA-----CAG---CAGCAACAACA---------GCA-------------GC---A-----GCA------------GC------------AACAGCAACAACAG---------CAGCAGCAA---CAACAACAGCAGCAACAACAACAGCA---GCAGCAGCAACAGCAAC---------AACAGCAGCAGCA------ACAACAACAGCAGCAA-------CAACAACAGCAGCAGCAACAACAGCAACAGCAACAACA-SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.................AA---CAACAGCAGC---AGCAAC------A......................................................................................................................................................................................................................................................................19200.20400040
.................................................................................................................................................................................................................................................................GCAGCAA-------CAACAACAGCA............................18200.15300030
......................................................................................................................................................................................GCAGCAACAACAACAGCA---...........................................................................................................18200.15300030
...............................................................CAGCAACAACA---------GCA-------------GC---A-----GCA------------GC------------...........................................................................................................................................................................22200.10200020
.....................................CAAC------AACAA-----CAG---CAGCAACAACA---------...................................................................................................................................................................................................................................23200.10200020
.................................................................................................................................................................................................................................................................................ACAACAGCAGCAGCAACAAC.................20200.10200002
...............................................................................................................CA------------GC------------AACAGCAACAACAG---------CAGCAGCAA---........................................................................................................................................27200.05101000
...................................................................................................................................................................................ACAGCAGCAACAACAACAGCA---...........................................................................................................21200.05100001
..............................................................................................................GCA------------GC------------AACAGCAACAACAG---------CAGCAGC.............................................................................................................................................26200.05101000
...................................................A-----CAG---CAGCAACAACA---------GCA-------------GC---A-----........................................................................................................................................................................................................21200.05100010
..............................................................................................................................................................................................................GCAGCAACAGCAAC---------AACAGCAGCAGC.....................................................................26200.05101000
............................................................................................................................................................................................................CAGCAGCAACAGCAAC---------AACAGCAG.........................................................................24200.05100010
...................................................................................................................................................................................................................AACAGCAAC---------AACAGCAGCAGCA------A.............................................................23200.05101000
...............................................AACAA-----CAG---CAGCAACAACA---------GC.................................................................................................................................................................................................................................21200.05100010
..............................................................................................................................................................................................................................................................ACAGCAGCAA-------CAACAACAGCA............................21200.05100001
.....................................................................................................................................................................................................................................AACAGCAGCAGCA------ACAACA........................................................19200.05100001
................CAA---CAACAGCAGC---AGCAAC------AACA...................................................................................................................................................................................................................................................................23200.05100010
........................................................................CA---------GCA-------------GC---A-----GCA------------GC------------AACAGCA....................................................................................................................................................................20200.05100010
...............................................................................................................................................................................................................CAGCAACAGCAAC---------AACAGCAGCAGCA------A.............................................................27200.05101000
....................................................................................................C---A-----GCA------------GC------------AACAGCAACAACAG---------CAG.................................................................................................................................................24200.05100010
................................................................................................................................................................................................................................................................AGCAGCAA-------CAACAACAGCAG...........................20200.05100010
...........................................................................................................................................AACAGCAACAACAG---------CAGCAGCAA---CA......................................................................................................................................25200.05100010
.....................................................................CAACA---------GCA-------------GC---A-----GCA------------GC------------AACAGCAA...................................................................................................................................................................24200.05101000
.................................................................................................................................................................................CAACAGCAGCAACAACAACAGCA---GC.........................................................................................................25200.05100010
......................................................................................................................................................CAG---------CAGCAGCAA---CAACAACAGCAGCA..........................................................................................................................26200.05100001
..................................................................................................................................................................................................................CAACAGCAAC---------AACAGCAGCAGCA------ACAA..........................................................27200.05100010
..............AACAA---CAACAGCAGC---AGCAA..............................................................................................................................................................................................................................................................................20200.05100010
.....................................................................................................................................................................................................................................................................CAA-------CAACAACAGCAGCAGC.......................19200.05101000
................................................ACAA-----CAG---CAGCAACAACA---------GCA-------------GC---..............................................................................................................................................................................................................23200.05100010
.................................................................GCAACAACA---------GCA-------------GC---A-----GCA------------GC------------...........................................................................................................................................................................20200.05100010
..............AACAA---CAACAGCAGC---AGCAAC------AACAA-----CA...........................................................................................................................................................................................................................................................28200.05100010
.......................................................................................................................................................................................................................................CAGCAGCAGCA------ACAACAACAGCAGCA...............................................26200.05100001
.....................................................................................................................................................................................AGCAGCAACAACAACAGCA---G..........................................................................................................20200.05100010
..............................................................................................................................C------------AACAGCAACAACAG---------CAGCAGCAA---CAA.....................................................................................................................................27200.05100010
...................................................................................................................................................................................................................AACAGCAAC---------AACAGCAGCAGCA------ACA...........................................................25200.05100010
...................................................................................................................................................................................................CAGCA---GCAGCAGCAACAGCA............................................................................................20200.05100010
...........................................................................................................................................AACAGCAACAACAG---------CAGCAGCAA---........................................................................................................................................23200.05101000
.........................................................................................................................................................................................GCAACAACAACAGCA---GCAGCAGCA..................................................................................................24200.05100010
................................................................................................................................................................................................................................................................................AACAACAGCAGCAGCAACAA..................20200.05100010
...................................................A-----CAG---CAGCAACAACA---------GCA-------------GC---A-----GCA------------.........................................................................................................................................................................................24200.05100010
....................................................................................................................................................AACAG---------CAGCAGCAA---CAACA...................................................................................................................................19200.05100001
...................................................................................................................................................................................................................................................................................AACAGCAGCAGCAACAACAGCAACA..........25200.05100100
.................AA---CAACAGCAGC---AGCAAC------AACA...................................................................................................................................................................................................................................................................22200.05100010
....................................................................ACAACA---------GCA-------------GC---A-----GCA------------GC------------AACAGC.....................................................................................................................................................................23200.05100010
dp5
AA-TTCACGGT-C-AACAG---CAGCACCAGC---AACAGC------AGCAA-----CAGCAGC---ATCAGCA---------GCAG-------A---------A-----GCA------------GC------------AGCAGCAACAGCAG---------CAACAGCAG---CAGCAGCAGAAGCAGCAGCAGCAACA---GCAGCAACAGCAGCAGC---------AACAGCAGCAGCA------GCAACAGCAACAACAG-------CAGCAGCAACAGCAGCAGCAACAGCAGCAGCAACAGCA-SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................CAGCAGC---ATCAGCA---------GCAG-------A---------A-----GC......................................................................................................................................................................................................2230.3310100000000
...............................................................C---ATCAGCA---------GCAG-------A---------A-----GCA------------GC------------...........................................................................................................................................................................1940.2510100000000
....................................ACAGC------AGCAA-----CAGCAGC---ATC................................................................................................................................................................................................................................................2080.1310001000000
................................................................................................................................................................................................................................................................AACAACAG-------CAGCAGCAACAGC..........................21200.1020200000000
...........................................................................................................................................................................................................GCAGCAACAGCAGCAGC---------AACAGC...........................................................................23200.0510010000000
.............................................................................................................................................................................................................................................................................................GCAGCAACAGCAGCAGCAACAGC..23200.0510010000000
.............................................................................................................................GC------------AGCAGCAACAGCAG---------CAACAGC.............................................................................................................................................23200.0510100000000
............................................................................................................................................................................................GCAGCAGCAACA---GCAGCAAC...................................................................................................20200.0510100000000
.................................................................................................................................................................................................................................................A------GCAACAGCAACAACAG-------CAGC...................................21200.0510100000000
...................................................................................................................................................................................................................................................................................AGCAACAGCAGCAGCAACAGCAGCAGC........27200.0510000000001
......................................................................................................................................................................................................................................................................................AACAGCAGCAGCAACAGCAGCA..........22200.0510100000000
.......................................................................................................................................................................................................A---GCAGCAACAGCAGCAGC---------AACAGC...........................................................................24200.0510010000000
...............................................................................................................................................................................................................................................................CAACAACAG-------CAGCAGCAACAGCAG........................24200.0510100000000
...................................................................................................................................................................................................................................................................................AGCAACAGCAGCAGCAACAGCAGC...........24200.0510000000001
.............................................................................................................................................................................................................AGCAACAGCAGCAGC---------AACAGCAGC........................................................................24200.0510000000001
...........................................................................................................................................................................................................................................................ACAGCAACAACAG-------CAGCAGCA...............................21200.0510100000000
.................................................................................................................................................................................................................................................................................GCAGCAACAGCAGCAGCAACAGC..............23200.0510010000000
............................................................................................................................................................................................GCAGCAGCAACA---GCAGCAACAGC................................................................................................23200.0510100000000
..............................................................................................................................C------------AGCAGCAACAGCAG---------CAACAGCA............................................................................................................................................23200.0510100000000
.............................................................................................................................GC------------AGCAGCAACAGCAG---------CAAC................................................................................................................................................20200.0510100000000
...............................................................................................................................................................................................................................................GCA------GCAACAGCAACAACAG-------CAGCA..................................24200.0510000100000
..............................................................................................................................................................................................................GCAACAGCAGCAGC---------AACAGCAGCAGC.....................................................................26200.0510000000001
.......................................................................................................................................................................................................................................CAGCAGCAGCA------GCAACAGC......................................................19200.0510000100000
.............................................................................................................................................................................................CAGCAGCAACA---GCAGCAACA..................................................................................................20200.0510000010000
.................................................................................................................................................................................................................................................................................GCAGCAACAGCAGCAGCAACA................21200.0510000100000
.............................................................................................................................................................................................CAGCAGCAACA---GCAGCAACAGCA...............................................................................................23200.0510100000000
.............................................................................................................................................................................................................................................................................................GCAGCAACAGCAGCAGCAACA....21200.0510000100000
................................................................................................................................................................................................................................................................................AGCAGCAACAGCAGCAGCAACAGC..............24200.0510010000000
................................................................................................................................................................................................................AACAGCAGCAGC---------AACAGCAGCA.......................................................................22200.0510100000000
................................................................................................................A------------GC------------AGCAGCAACAGCAG---------CAACAGCAG---CA......................................................................................................................................28200.0510100000000
.................................................................................................................................................................................................................................................................................GCAGCAACAGCAGCAGCAACAGCAGCA..........27200.0510100000000
...............................C---AACAGC------AGCAA-----CAGCAGC---...................................................................................................................................................................................................................................................19200.0510000100000
.......................................................................................................................................................................................................................................................................................ACAGCAGCAGCAACAGCAGC...........20200.0510100000000
.............................................................................................................................................................................................................................................................AGCAACAACAG-------CAGCAGCAA..............................20200.0510000100000
..............................................................................................................................C------------AGCAGCAACAGCAG---------CAACA...............................................................................................................................................20200.0510000010000
.............................AGC---AACAGC------AGCAA-----CAGCAG.......................................................................................................................................................................................................................................................20200.0510100000000
.......................................................................................................................................................................................................................GCAGC---------AACAGCAGCAGCA------GCA...........................................................21200.0510000100000
....................................................................................................................................................................................................................................................................................GCAACAGCAGCAGCAACAGCAGCAGC........26200.0510000000001
...........................................................................................................................................................................................................GCAGCAACAGCAGCAGC---------AACA.............................................................................21200.0510000100000
.......................................................................................................................................................................................................................GCAGC---------AACAGCAGCAGCA------GCAACAGCA.....................................................27200.0510000000001
............................................................................................................................................................................................................CAGCAACAGCAGCAGC---------AACAGCAGCA.......................................................................26200.0510001000000
...........................................................................................................................................................................................AGCAGCAGCAACA---GCAGCAACAGCAGCA............................................................................................28200.0510100000000
...........................................................................................................................................................................................................GCAGCAACAGCAGCAGC---------AACAGCAGCA.......................................................................27200.0510100000000
.............................................................................................................................................................................................................AGCAACAGCAGCAGC---------AACAGCAGCAGC.....................................................................27200.0510000000001
...........................................................................................................................................................................................................................C---------AACAGCAGCAGCA------GCAACAGC......................................................22200.0510100000000
..................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAGCAACAGCAGCA..........26200.0510001000000
.................................................................................................................................................................................................................ACAGCAGCAGC---------AACAGCAGC........................................................................20200.0510100000000
...........................................................................................................................................................................................................................................AGCAGCA------GCAACAGCAACAACA...............................................22200.0510100000000
........................................................................................................................................................................................................................................................GCAACAGCAACAACAG-------CAGCAGC................................23200.0510000001000
............................................................................................................................................................................................................................................GCAGCA------GCAACAGCAACAACAG-------C......................................23200.0510000100000
droPer2
C-----------C-CGCAA---CAGCAGCAGC---AAATGC------AACAG-----CAGCAGC---AAAT------------GCA-------------GCAACA-----GCA------------GCA---AC------AG---CAACAACAG---CAG---CAAATGCAG---CAGCA---ACAGCAACAGCAGCAAAT---GCAGCAACAGCAGCAGC---------AGCAGCAACAGCA------GCAACAACAGCAACAA-------CAGCAACAACAGCAGCAACAACAGCCGCAACAACAGCA-SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................................................CA------GCAACAACAGCAACAA-------CAGC...................................22200.051100000
......................................................................................................................................................................TGCAG---CAGCA---ACAGCAACA.......................................................................................................................19200.051001000
................................................................................................................................................................................................................AACAGCAGCAGC---------AGCAGCA..........................................................................19200.051001000
......................................................................................................................................................................................................................................................................AA-------CAGCAACAACAGCAGCAAC....................21200.051010000
droAna3
G-----------C-AGCAG---AAACAGCAGG------CAG------AG--------CAGGAGC------GACG---------GCAGCA----------GC---AGC--AGCC------------AC------------AGCAGCAACAGCAG---------CAGCAGCAA---CAGCAACAGCAACAGCAACAGCAGCA---GCAACAGCAGCAGCAAC---------AGCAGCAGCAGCCACAGCAGCAGCAACAGCAGCAA-------CGACAGCAGCAGCAGCAACGTCAGCAGCAGCAGCAACG-SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..........................................................................................................................................................................................................................AC---------AGCAGCAGCAGCCACAGC...............................................................2011.001010000
.....................................................................................................................................................................................................................CAGCAAC---------AGCAGCAGCAGCCAC..................................................................2220.501010000
.....................................................................................................................................................................................................GCA---GCAACAGCAGCAGCAAC---------AGCAGCAGC........................................................................2960.171010000
.........................................................................................................................................................................................................................................GCAGCAGCCACAGCAGCAGC.........................................................2070.141010000
....................................................................................................................................................................................................................GCAGCAAC---------AGCAGCAGCAGCC....................................................................21160.132011000
......................................................................................GCA----------GC---AGC--AGCC------------AC------------AGCAGC.....................................................................................................................................................................2080.131000001
......................................................................................................................................................................................................................................GCAGCAGCAGCCACAGCAGC............................................................2080.131000001
..............................................................................................................................................AGCAACAGCAG---------CAGCAGCAA---CAGCA...................................................................................................................................25200.102011000
......................................................................................................................................................................................................CA---GCAACAGCAGCAGCAAC---------AGCAGCA..........................................................................26130.081010000
..........................................................................................................................................................................................CAGCAACAGCAGCA---GCAACAGCAGCA...............................................................................................26130.081010000
......................................................................................................................................................................................GCAACAGCAACAGCAGCA---GCAACAGC...................................................................................................26140.071010000
..................................................................................................................................................................................AACAGCAACAGCAACAGCAGCA---GCAAC......................................................................................................27150.071000001
.............................................................................................................................................................................................CAACAGCAGCA---GCAACAGCAGCAGC.............................................................................................25200.051010000
........................................................................................................................................................................CAA---CAGCAACAGCAACAGCAACAGCAGC...............................................................................................................28200.051010000
....................................................................................................................................................AGCAG---------CAGCAGCAA---CAGCAACAGC..............................................................................................................................24200.051000001
.....................................................................................................................................................................................................GCA---GCAACAGCAGCAGCAAC---------AGCAGA...........................................................................26200.051100000
....................................................................................................................................................................................CAGCAACAGCAACAGCAGCA---...........................................................................................................20200.051010000
.......................................................................................................................................................................................CAACAGCAACAGCAGCA---GCA........................................................................................................20200.051100000
........................................................................................................................................................................................AACAGCAACAGCAGCA---GCAACAGC...................................................................................................24200.051010000
......................................................................................................................................................................................................................AGCAAC---------AGCAGCAGCAGCC....................................................................19200.051000001
...............................................................................................................................................................................AGCAACAGCAACAGCAACAGC..................................................................................................................21200.051001000
.......................................................................................................................................................................................................A---GCAACAGCAGCAGCAAC---------A................................................................................19200.051010000
..........................................................................................................................................................................A---CAGCAACAGCAACAGCAAC.....................................................................................................................20200.051010000
............................................................................................................................................................................................................CAACAGCAGCAGCAAC---------AGCAGCAGC........................................................................25200.051010000
.............................................................................................................................................................................................................AACAGCAGCAGCAAC---------AGCA.............................................................................19200.051000001
.....................................................................................................................................................................................................GCA---GCAACAGCAGCAGCAAC---------AGC..............................................................................23200.051010000
droBip1
A-----------G-AACAA---CAACAACAAC---AA---C------AACAAAATTACAACAA-------AATT---------ACA-------------ACAACAAG--AAGA------------AG------------AACAACAACAACAA---------CAACAACAA---CAACAACAAGAACAACAACAACAACA---ACAACAACAACAACAAC---------AACAACAACAACA------ACAACAACAACAACAA-------CAACAACAACAACAACAACAACAACAACAACAACAACA-SizeHit CountTotal NormTotal
No Reads
droKik1
TTC---A--ATTC-ATCAA---CAGCAGCAGC---A---GC------AACAA-----CAA---C---AGCATCT---------ACAG-------CA---GC---A-----GCA------------ACA---AC------AGCATTTACAGCAG---------CAGCAACAA---CAGCATTTACAGCAGCAGCAGCATTT---ACAG---CAGCAGCAACAACAGCATCTACAGCAGCAGCA------ACAACAGCATTTACAG-------CAGCAGCAGCAGCAGCATTTACAGCAGCAGCAGCAACA-SizeHit CountTotal NormTotal
No Reads
droFic1
TT----G--AT-CAAGCAG---CAGCAGCAGCAACGGCAGC------AACTG-----CAGCAGC------AGCA---------ACTG-------CAGCAGC---A-----ACA------------AC------------AGCAGCAGCAACAA---------CAGCAGCAA---CAACAGCAGCAGCAACAGCAACAGCA---GCAACTACAACAACAAC---------AGCAGCAACAGCA------GCAGCAACAACAGCAA-------CAGCAGCAACTACAACAACAACAGCAGCAGCAGCAGCA-SizeHit CountTotal NormTotal
No Reads
droEle1
A--------------ACAACAACAGCAGCAGC---AGGAGC------AACAA-----CATGAGC---AACAACT---------GCA-------------CC---A-----GCA------------GG------------AGCAACAACATCAG---------CAACAACAG---CAGCAACAACATGAGCAACAACAGCA---GCAACAACAGCAGCAAC---------AACAGCAGCAACA------ACATGAGCAACAACAGCAGCAAC-AACATGAACAACAACAGCAGCAACAACATGGGCAACA-SizeHit CountTotal NormTotal
No Reads
droRho1
A-----------C-AGCAG---CAACAACAGCAGCAGCAAC------AACAA-----CAG---C---AG------------------CAGCAAC----AAC-----------AGCAGCAG---CAACA---ACAGCAGCAGCAACAACAACAG---------CAGCAGCAA---CAACAGCAGCAGCAACAACAACAGCA---GCAGCAACAACAACAGC---------AGCAGCAACAACA------GCAGCAGCAACAACAG-------CAGCAACAGCAACAACAACAACAGCAGCAACAGCAACA-SizeHit CountTotal NormTotal
No Reads
droBia1
------------C-GACAA---CAGCAACAAC---AGTTTA------GG--------CATCAT---------GTGCAA---ATACA-------------ACAGCAGC--AACA------------AA------------AGCAACAACAACAG---------CAGCAGCAG---CATCAGCAACAACAACAACAACAACA---ACAGCAACAGCAGCAAC---------AGCAACAGCAACA------GCAGCAGCAACAACAG-------CAGCAACAACAACAACAACAGCAGCAGCAGCAGCAGCA-SizeHit CountTotal NormTotal
No Reads
droTak1
------------C-AGCAG---CAGCAGCAGC---AAAATA------TGCAT-----CAT---C------ACCA---------ACAG-------CAGCAGC---A-----GCA------------CCA---AC------AA---CAGCAGCAG---------CAGCATATG---------CAACAGCAGCAGCAACACCA---ACAGCAGCAGCAACAAC---------ATCAACAGCAGCA------GCAGCAACATCAACAG-------CAGCAGCAGCAGCATCAACAACAGCAGCAGCAACAACA-SizeHit CountTotal NormTotal
No Reads
droEug1
------------C-ATCAA---CAGCAGCAGC---AGCAGC------AACAGA--ATATGCATC------ATCA---------TCAA-------CA---GC---A--GCAGCA------------GC------------ATCAACAACAACAG---------CAGCAGCAG---CAGCATATGCAACAGCATCAGCAGCA---GCATCAACAGCAGCAGC---------ATCAACAGCAACA------TCAACAGCAACAGCAT-------CAACAGCAGCAGCAACAACATCAGCAGCAGCAGCAACA-SizeHit CountTotal NormTotal
No Reads
dm3
A-----------C-AA------AAGCAGCAG------GCTA------CG--------CAGCAGC---AACAAAT---------TCA-------------GCAGCA-----GCA------G---CAAT------------TGCAGCACCAACAC---------CAGATGCAG---CAACAACAGCAGCAGCAGCAGCAGCA---GCAACAACAACAACAAC---------AACAACAACAACA------ACAACAACAACAACAA-------CAACAACAGCAGCAGCAGCAGCAGCAGCAACATCAACA-SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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droSim2
C-----------C-AGCAG---CAGCAGCAGC---AG---CAGCATCAACAA-----CAA---C---AG-------------------------------C---A--GCAGCA------GCAGCAGCAGCAGC------AA---CAACATCAG---CAGAATATGCATCAC---CATCA---ACATCAGCAGCAACACATGCAGCAGCAGCAGCAACAAC---------AACAACATCAGCA------GCAGCAGCAGCAACAA-------CAACAACATCAGCAGCAGCAACACCAACAGCAGCAGCA-SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................................................................................CAGCAACACATGCAGCAGCAGC...................................................................................................2211.00100000000001000000
.............................................................................................................................................................AGAATATGCATCAC---CATCA---ACAT............................................................................................................................2311.00100000100000000000
...........................................................................................................................................................................................AGCAGCAACACATGCAGCAGCA.....................................................................................................2211.00100000000001000000
.............................................................................................................................................................................................................................................................................................GCAGCAACACCAACAGCAGCAGC..23101.0010000001000000000000
..................................................................................................................................................................................................................................................................................................AACACCAACAGCAGCAGCA-19160.9415000015000000000000
...................................AG---CAGCATCAACAA-----CAA---C---...................................................................................................................................................................................................................................................1880.88700000700000000000
................................................................................................................................................................................................................................................................AGCAACAA-------CAACAACATCAGCA.........................2240.25100010000000000000
...................................................................................................................................................................................................................AGCAACAAC---------AACAACATCAGCA------..............................................................2240.25100010000000000000
.................................................................................................................................................................................................................................................................................ACAACATCAGCAGCAG.....................16140.07100000000001000000
............................................................................................................................................................................................................................................................................................AGCAGCAACACCAACAGCAGCAGCT-25140.07100000000001000000
......................................................................................................................................................................................................................................ACAACATCAGCA------GCAG..........................................................16140.07100000000001000000
.................................................................................................................................CAGC------AA---CAACATCAG---CA........................................................................................................................................................17200.05100000010000000000
droSec2
T-----------CGAGCAG---CATCAGCCGC---ACCAGT------CG--------CATCAGC------AACA---------TCAG-------CA---GC---A--GCAGCT------G---CAGC------------ATCAGCAGCAG------------CAGCAGCTGCAGCATCAGCAGCAGCAGCAACATCAGCA---GCAACAAAATCAGCAGC---------AGCAGCAGCTACA------ACAGCAACATCAGCAG-------CAGCAACAGCTGCAGCATCAGCAGCAGCATCAGCAGCA-SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................................................................................................................................................................................................................CAGCATCAGCAGCAGCATCAGCA....2340.2510010
.......................................................................................................................G---CAGC------------ATCAGCAGCAG------------CAGCAGC.............................................................................................................................................23100.1010010
............................................................................................................................................................................................................................................................CAACATCAGCAG-------CAGCAACAG..............................21110.0910001
.........................................................................................................................................................................................GCAGCAACATCAGCA---GCAAC......................................................................................................20130.0810010
...........................................................................................................................................................................................................................................................GCAACATCAGCAG-------CAGCAACA...............................21160.0610010
..............................................................................................................................................................................................................................................................ACATCAGCAG-------CAGCAACA...............................18200.0511000
...............................................................................................................................................................................................................................................................CATCAGCAG-------CAGCAACAGC.............................19200.0510010
..........................................................................................................................................................................................................................................................AGCAACATCAGCAG-------CAGCAA.................................20200.0510001
droYak3
------------C-AGCAG---CAACAGCAGC---AACAGC------AGCAG-----CAA---CAGCAGCAACA---------ACAG-------CA---GC---A--GCAGCA------------GC------------AACAGCAGCAACAT---------CAGCAACAA---CAGCAACAACAGCAGCAGCAACAGCA---ACAACAGCAAAAGCAGC---------AACAGCAGCAACA------ACAGCAGCAACAGCAG-------CAACAACAGCAACAGCAGCAACAGCAGCAGCAGCAGCAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................................................................AAAGCAGC---------AACAGCAGCAACA------AC............................................................2320.50101000000000
..................................................................................................................................................GCAACAT---------CAGCAACAA---CAGCAACA................................................................................................................................2440.25101000000000
................................................................AGCAGCAACA---------ACAG-------CA---GC---A--GCAGC......................................................................................................................................................................................................24200.15303000000000
........................................................................CA---------ACAG-------CA---GC---A--GCAGCA------------GC------------...........................................................................................................................................................................19200.15303000000000
...............................................................................................A---GC---A--GCAGCA------------GC------------AACAGCA....................................................................................................................................................................19200.10202000000000
......................................................................................................................................................................................................................AGCAGC---------AACAGCAGCAACA------ACAGCAGC......................................................27150.07100100000000
...............................................AGCAG-----CAA---CAGCAGCAACA---------ACAG-------CA---GC---..............................................................................................................................................................................................................27150.07100100000000
...............................................................................................................................................................................................................................................................................................AGCAACAGCAGCAGCAGCA....19200.05101000000000
............................................................................................................................................................................................................................................................................................AGCAGCAACAGCAGCAGCAGCAGC..24200.05100010000000
...............................C---AACAGC------AGCAG-----CAA---CAGCA..................................................................................................................................................................................................................................................20200.05101000000000
.................................................................................................................................................................................................................................................................................ACAACAGCAACAGCAGCAAC.................20200.05100000100000
........................................................................................................................................................................................AGCAGCAGCAACAGCA---ACAAC......................................................................................................21200.05101000000000
..............................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAGCAGC.....19200.05100010000000
..............................................................................................CA---GC---A--GCAGCA------------GC------------AACAGCAGC..................................................................................................................................................................22200.05100010000000
.........................................................CAA---CAGCAGCAACA---------ACAG-------CA---GC---A--...........................................................................................................................................................................................................23200.05101000000000
...............................................................................................................................................................................................................................................ACA------ACAGCAGCAACAGCAG-------CA.....................................21200.05101000000000
........................................................................CA---------ACAG-------CA---GC---A--GCAGCA------------GC------------A..........................................................................................................................................................................20200.05100000100000
...........................................................................................................................................................................................................................C---------AACAGCAGCAACA------ACAGCAGCA.....................................................23200.05101000000000
.........................................................................................................................................................................................................................................................................................AACAGCAGCAACAGCAGCAGCAG......23200.05101000000000
.......................AACAGCAGC---AACAGC------AGCA...................................................................................................................................................................................................................................................................19200.05101000000000
...................................................................................ACAG-------CA---GC---A--GCAGCA------------GC------------AACAGCA....................................................................................................................................................................24200.05100100000000
.....................................................................................AG-------CA---GC---A--GCAGCA------------GC------------AACAGCAGCAAC...............................................................................................................................................................27200.05100000000001
...............................C---AACAGC------AGCAG-----CAA---CAGC...................................................................................................................................................................................................................................................19200.05101000000000
........................................................................................................................................................................CAA---CAGCAACAACAGCAGCA.......................................................................................................................20200.05101000000000
..........................................................AA---CAGCAGCAACA---------ACAG-------CA---GC---A--GC.........................................................................................................................................................................................................24200.05101000000000
...............................................................................................................................................................................AGCAACAACAGCAGCAGCAACAGC...............................................................................................................24200.05100100000000
.........................................................................................................................................................................................................................................GCAGCAACA------ACAGCAGCAACAGCA...............................................24200.05101000000000
....................................................................GCAACA---------ACAG-------CA---GC---A--GCAGC......................................................................................................................................................................................................20200.05100100000000
...................................................................................................GC---A--GCAGCA------------GC------------AACAGCAGCAACA..............................................................................................................................................................24200.05101000000000
.......................................................................................................................................................................................................................................................................G-------CAACAACAGCAACAGCAGC....................20200.05101000000000
..............................................................................................CA---GC---A--GCAGCA------------GC------------AACAGCAGCAAC...............................................................................................................................................................25200.05100000000001
.......................................GC------AGCAG-----CAA---CAGCAGCAAC.............................................................................................................................................................................................................................................20200.05100100000000
..............................................................................................................................................................................CAGCAACAACAGCAGCAGCAACAGC...............................................................................................................25200.05100100000000
..............................................................................................................................................................................................................................................AACA------ACAGCAGCAACAGCAG-------.......................................20200.05101000000000
...............................................................CAGCAGCAACA---------ACAG-------CA---GC---A--...........................................................................................................................................................................................................20200.05101000000000
..............................................................................................................................................................................................................................................AACA------ACAGCAGCAACAGCA...............................................19200.05101000000000
.........................................................................................................................................................................................................................................................................................AACAGCAGCAACAGCAGCAGCAGC.....24200.05101000000000
.......................................................................................................................................................................................................................................CAGCAGCAACA------ACAGCAGCA.....................................................20200.05101000000000
................................................................................................................................................................................GCAACAACAGCAGCAGCAA...................................................................................................................19200.05101000000000
..............................................................................................................................................................................CAGCAACAACAGCAGCAGCA....................................................................................................................20200.05101000000000
...............................................................................................A---GC---A--GCAGCA------------GC------------AACAGCAGC..................................................................................................................................................................21200.05100010000000
droEre2
AAC-AGT--AT-C-AGGAG---AAGCAAAAGCTAATGCTGC------AGCAA-----CAG------------------------CAGCAGCAAC----AGC-----------AGCAGCAA---CAAC------------AGCAGCTGCAGCAG---------CAGCAACAA---CAGCAGCTACAGCAGCAGCAACAACA---GCAGCTGCAGCAGCAGC---------AACAACAGCAGCT------GCAGCAGCAACAACTG-------CAGCAGCAACTGCAACAACAGCAGCTGCAACTGCAACA-SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................AGCAACAA---CAGCAGCTACAGCA..........................................................................................................................2220.5010000100
.........................................................................................................................................................................................................................................................................................TGCAACAACAGCAGCTGCA..........1920.5011000000
..................................................................................................................................................................CAGCAACAA---CAGCAGCTACAGCAGCA.......................................................................................................................2620.5010000010
..................................................................................................AGC-----------AGCAGCAA---CAAC------------AGC........................................................................................................................................................................18200.1530000030
.....................................................................................................................CAA---CAAC------------AGCAGCTGCAGCA..............................................................................................................................................................2070.1410000100
................................................................................................................................................................................................CAACAACA---GCAGCTGCAGCA...............................................................................................2070.1410000100
...........................................................................................................................................................................................................................C---------AACAACAGCAGCT------GCAGCA........................................................2070.1410000100
...........................................................................................AAC----AGC-----------AGCAGCAA---CAAC------------AGCA.......................................................................................................................................................................22200.1020000200
........................................................................................................................................................................................................................................AACAGCAGCT------GCAGCAGCA.....................................................19130.0810001000
............................................................................................................................AAC------------AGCAGCTGCAGCAG---------CA..................................................................................................................................................19130.0810001000
....................................................................................................................................................................................................AACA---GCAGCTGCAGCAGCA............................................................................................19130.0810001000
.......................................GC------AGCAA-----CAG------------------------CAGCAGCAAC----AGC-----------AGCAGC................................................................................................................................................................................................29200.0510100000
..................................................................................................................................................GCAGCAG---------CAGCAACAA---CAGCAGC.................................................................................................................................23200.0510000100
.................................................CAA-----CAG------------------------CAGCAGCAAC----AGC-----------......................................................................................................................................................................................................19200.0510100000
........................................................................................AGCAAC----AGC-----------AGCAGCAA---CA.........................................................................................................................................................................................19200.0510001000
...........................................................................................AAC----AGC-----------AGCAGCAA---CAAC------------AGCAGC.....................................................................................................................................................................24200.0511000000
.................................................................................................................................................................................................................GCAGCAGCAGC---------AACAACAGCAGC.....................................................................23200.0510000100

Generated: 05/17/2015 at 10:11 PM