ID:

dgr_202

 Coordinate:

scaffold_14906:5994976-5995044 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.6 -6.2 -6.1

Flybase annnotation

intron [Dgri\GH19159-in]; CDS [Dgri\GH19159-cds]; exon [dgri_GLEANR_3474:2]; exon [dgri_GLEANR_3474:3]; CDS [Dgri\GH19159-cds]; intron [Dgri\GH19159-in]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey+
(CAG)nSimple_repeatSimple_repeat+
mature
  1. scaffold_14822:244242-244262 +
  2. scaffold_14853:2293964-2293984 +
  3. scaffold_14853:7028168-7028188 +
  4. scaffold_14853:8397271-8397291 +
  5. scaffold_14853:9026841-9026861 +
  6. scaffold_14906:4089515-4089535 +
  7. dgr_202  scaffold_14906:5994987-5995007 +
  8. scaffold_15074:1637490-1637510 +
  9. scaffold_15074:4390993-4391013 +
  10. scaffold_15074:4569092-4569112 +
  11. scaffold_15110:1748101-1748121 +
  12. scaffold_15110:20817097-20817117 +
  13. scaffold_15126:1533968-1533988 +
  14. scaffold_15126:6663130-6663150 +
  15. scaffold_15126:7849952-7849972 +
  16. scaffold_15203:8164511-8164531 +
  17. scaffold_15245:5280510-5280530 +
  18. scaffold_15252:7944534-7944554 +
  19. scaffold_15252:11097249-11097269 +
  20. scaffold_15252:14472947-14472967 +
star

Sense Strand Reads

--------------------##############################---------------------------------------------------------------------##################################################
ATTAGTAACTTATTAATTAGCCATAATTCACATAACAACAATCACAACAACAACAGCAACGGCAACAGCAGCAGCAGCAACAGCAACAGCAACAGCAACAGCAGCAAAATGAACGCCTGGTCGCAGCAGCCAATGGCCCAAGCCGAGGCTATATCCGCCTTGTGGGGCT
**************************************************..........(((..((...((.((.((....((....))....))....)).))....))...)))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M041
female body
.................................................................................................................CGCCTGGTGCCAGCAGCC...................................... 18 2 9 0.11 1 1
.............................................................GCAACAGCAGCAGCAGCAACA....................................................................................... 21 0 20 0.10 2 2
.............................................................GCAACAGCAGCAGCAGCAACAGCAA................................................................................... 25 0 20 0.05 1 1

Anti-sense strand reads

TAATCATTGAATAATTAATCGGTATTAAGTGTATTGTTGTTAGTGTTGTTGTTGTCGTTGCCGTTGTCGTCGTCGTCGTTGTCGTTGTCGTTGTCGTTGTCGTCGTTTTACTTGCGGACCAGCGTCGTCGGTTACCGGGTTCGGCTCCGATATAGGCGGAACACCCCGA
**************************************************..........(((..((...((.((.((....((....))....))....)).))....))...)))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M041
female body
..........................................................................................................TTTACTTGCGAACCGGCG............................................. 18 2 17 0.06 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droGri2 scaffold_14906:5994926-5995094 + dgr_202 ATTAGTAAC----------------------------TTATTAA------------TTAGC------------------------CATAATT-----------CACAT--------AACAACA---------------------A---TC---------A-----------------------------CAACAA---C---A---ACAGCAACGGCAACAGCAGCAG---------------CAG---------------------CAACAGCA-----------------------ACAGCAACA------GCAACAGCAGCAAAA------TGA------ACGCC--------------------TG--GTCGCA--------------------GCAGCCAA------TGGCCCAAGCC-----------------------GAGGCTATATCCGCCTTGT--GGGGCT
droVir3 scaffold_12970:2622671-2622823 + ATTAGCTAT----------------------------ATTGATA------------GCG---------------------------ACGATA-----------CACCG------------ACA---------------------A---GC---------ACAGCAGCAA--------------------CAGTTGCTGCTGCA---G------CAGCAACAACAACAG---------------CAA---CAGC---AG---------CAGCAGCA-----------------------ACAACAACA------ACGTCTGGA------------GCAA---CAACAT--------CGGGCCAAAAG-CTGG--C-----------------------------------------------------------C-----------------AATAT-----TTGT--TATTTT
droMoj3 scaffold_6473:14904776-14904926 + TGCAGCAGC----------------------------GCGTACA------------GCAGC--------------------AGCA-----------------------------------GCA---------------------G---CA---------T-----------------------------CAGCAG---C---A---A------CAGCAACAACAGCAG---------------CAG---CAGC---AG---------CAACAGCA-----------------------GCAGCAACA------GCAACAACA------------GCAA---CAGAAC--------------------ATG--GCCACGGCAAT------GG-----------------------CAGCGGGCA-----------------------TGCGCCATCATCCGCTCCT--GGCGCC
droWil2 scf2_1100000004762:1352936-1353107 - ATCAGCAAT----------------------------TGTCGCA------------TCAGC------------------------AACAACA-----------GGCAC--------TGCATCA------------------------------------GC--------------ATCATCAA------CAGCAG---C---A---A------CAGCAGCAGCAGCAG---------------CAA---C---AACAA---------CAACACCA-----------------------GCAACAT---------CAACAGCA------------GCA---GCAGCACCCGCACTC-------------CC-----------AGCTAAGCGG---------------------CGGCCCACAGG-----------------------CAACGCACTCCCACTCTGC--ACATCC
dp5 2:1322809-1322962 - ATTAGTAAC----------------------------TTATTAA------------TTAGC------------------------CATAATT-----------CGAGC---AGC-A----ACA---------------------G---CC---------A-----------------------------CAATCA---C---A---T------TAACAACAACAACAT---------------CAA---C------AA---------CAGCAACA-----------------------ACGCCCAGA------ACAACAGCC------------AGA---------A------------------G-CTG-----------AACGGGGCCT---------------------GGGGCCAGACG-----------------------GACACCATATCCGCCCTGT--GGGGCT
droPer2 scaffold_8:3783473-3783639 - GATATCGAT----------------------------TTATACA------------GGGAC----ATTGAGTATCAACAACA--------------------------------------ACA---------------------G---CAAGACCATCAGG--------------------------------AG---C---A---G------CAGCAGCAGCAGCAG---------------CAGCAGC---AGCAG---------CAGCCGCA-----------------------GCAACAGCA------GCAATATCA------------GCA---------A------C--------------CAGCAGTACGCC-----------------ACCAGCAGACGCA--ATCAACC-----------------------------------TACCGCCCATT--GGAGCT
droAna3 scaffold_12903:386606-386757 + AACAACAAC----------------------------AGCAACA---------------------------------------------TTTCTACCAGC---------------A----ACAGATACA---------------ACAACA---------AC--------------AACAACAA------CAACAA---C---A---G---------------CAGCAGCAGCAACAGCAACAGCAA---CAAC---AT---------CATCATCA---GCT---GCTAGCCACCGGCGGCAACAACA------GCAGCAGCA------------GC------AGCAG----------------------------------------------------------------------------------------------------------------CTTTAT--GCG--G
droBip1 scf7180000396423:460818-460984 + ATCAGCAGC----------------------------ACCAGCA------------GCA-------------------------------------------------------------------------------------T---CA---------ACAGCATCAGCAGCAC--------------CAGCAG---C---A---C------CAGCAACATCAACAG---------------CAT---CAGC---AG---------CACCAGCA-----------------------GCATCAACA------GCATCAGCA------------GCA---------A------------------G---------GCG---GTGT-GTCCGTCTCCCAGCAGCAGATGGTGCCGGTCAG-----------------------------TGTGGCTGCCGCCCTGCAGGTGGCT
droKik1 scf7180000302398:198294-198450 + AAAATAATTAGAGTAG-----------------AAA------AA------------GCT---------------------------AGCAAA-----------GAGCC--------------A------------------------------------GA--------------AGCAGCAGCAGCAACAGCAT---C---C---C------CAGCAGCAGCAGCAG---------------CAA---CATC---CC---------CAGCAGCA---GCTGCAACCTC---C------------CA------GCAGCAGCT------------GCA---------AC----------------------------------------------------------------CTCCCCAAGCG-----------------------ACAACTACACACCTTTTTG--GTGGCT
droFic1 scf7180000454078:485096-485249 + TGCTCACTCCCATTCC-----------------CATCACGCACA------------GCAGC--------------------AACA------------------G---------C-A----ACA---------------------G---CA---------A-----------------------------CAGCAA---C---ATCAG------CAGCAGCAACAGCAA------------CAGCAA---C------AACAGCAGCAACAGC---A---------CCTTC---A--TCATCACCATCAGCAACATGGGCA---------------GCA---TCA----------------------------------------------------------------------------------------------------------GCAACATTTGACGCCA--GCGGCT
droEle1 scf7180000491199:173854-174011 + AGTCGCAAC----------------------------ATCTACA------------ATAAT----CCCTATATTCCGCAGCA--------------------------------------GCA---------------------G---CA---------A-----------------------------CAGCAA---C---A---G------CAGCAACAGCAGCAGCAACAG---------C------------AG---------CAGCAGCA-----------------------GCAGCAACA------GCAACAGCTGCA---------GCA---------G------------------AC-GC------------------------------AAC------------AGCG----CACCGCCCACCTGTTCAAGGCGT-TGGCTGCCTCC-------------GC
droRho1 scf7180000760202:71790-71942 + ATTAATACCC------ATTTCGTTTTAGCAAAT----TCAACAA----CAGCAGCAAC-----------------------A---------------------A---C-------A----GCAGCAGCA---------------A---CA---------ACAA--------------------------CAGCAG---C---A---G------CAACAACAGCAGCAGCAACAACAGCAGCAGCAA---C------AA---------CAACAGCA-----------------------GCAGCAACA------ACAGCAGCA------------GCAA---CA--------------------------------------------------------------------------------------------------------------------ACAACA--GCAGCA
droBia1 scf7180000302075:4702435-4702583 + ATTTGTAAA------------------------TAAATTAGAT------------------------------------------CGTGATT-----------ATGGCAACATCA-----ATA---------------------T---CG---------C-----------------------------CAGCAA---C---A---T---------CAACATCAGCAG---------------CGG---CAGCAGCAG---------CAACGGCAACAGCAACAGGCAT--CC------CCGCAGCA------GCAACATTA------------TTA---------A--------------------CCGG--C-----------------------------------------------------------C-----------------AGTGTCTGGCATGT--GTGGCT
droTak1 scf7180000413903:78451-78608 + GGGAATGCAA------C--------------------TCAAGGT------------GGAGA------------------------CACTGC--------------CCC--------------A------------------------------------GC--------------AGCAGCAA------CAGCAA---C---A---GCAGCAACAGCTGCAGCAGCAG---------------CAA---------------------CAACACCA-----------------------ACAGCAG---------CAGCAGCA------------GCA---ACATGCCTCGCAATC-------------CC-AGGGACGAA--GCCAAGCGG-----------------------------------------------------------CGGTGAGCAGCATGT--CCTCCG
droEug1 scf7180000409553:228415-228574 + TGCAGCAGCCGCCTAC-----------------CAAAATCAACA------------GCAGC--------------------AGCA-----------------------------------GCA---------------ACAACAA---CA---------G-----------------------------CAGCAG---C---A---A------CAGCAACAGCAGCAG---------------CAG---C---AACAC---------CACCAGCA-----------------------GCAACAACA------ACAGCAGCA------------GCAA------CAAC------------------------AGCACGGCAAACA-------------------------------GA------GCAGCTCACC-----------------CGCACCCAATGTG---GGCGGT
dm3 chr2R:10206516-10206664 + T-CAGCAAT----------------------------TAATTAA----------------T----GC------------------CAACAGT-----------CCGGC--------------A---------------GCAACAT---CA---------A-----------------------------CAGCAG---C---A---A------CAGCAACAGCAGCAG---------------CAG---C---AACAG---------CAGCAGCA-----------------------GCTACAGCA------GCAACATCAGCAACATGAACAAA--------------------------------AA--GCTGCA-----------------------AC------------AAT------GCCGCCTGCC------------AGCGCTAA---------------ATTC
droSim2 3r:13890071-13890224 - GTGC-CGCC----------------------------CACCGGA---------------------------------------------GGCCCGCCGTCAACACCCCAGCAGCA-----ACA---------------------A---CA---------A-----------------------------CAGCAG---C---A---A------CAGCAACAGCAGCAG---------------CAA---C---AACAG---------CAACAGCAGCAGCAACAGGCGT---C--------G-AACG------GCGGCAACA------------GCA---------ATGCCACGCC------------CGC--C-----------------------------------------------------------C-----------------AAAGTCCG--ACGA--GGAGCA
droSec2 scaffold_16:844639-844798 + GCTGGCAAC----------------------------AACA-CT----TGCCAAC----------------AA----------------TTCCCATCATCAACACTTGAGC---------GCAACAGCAGCAGAGACAGCCGCAG---CA---------G-----------------------------CAGCAG---C---A---A------CAGCAACTGCAGCAG---------------CAG---C---AACTG---------CAGCAGCA-----------------------GCAGCAACA------GCAACTGCA------------GCAGCAACAGCAA-------------------------------------------------------C-------------------------------------------------------CATGTTG--CTGACT
droYak3 3L:14831369-14831531 - ATTGGCAAT----------------------------TTGAAT--------CAG--GTGAATATGACTGACTTTCAACAACA--------------------------------------ACA---------------------G---CA---------A-----------------------------CAGCAGCAGC---A---G------CAGCAACAACAGCAG---------------CAG---CAAC---AG---------CAGCAGCA-----------------------ACAACAACA------GCAGCAACA------------GCA---------A------------------AC-AC------------------------------AACAGACGCT--CTGATCGGA----------------CCGAAGTCT-----TAGATCCACCTT--------GT
droEre2 scaffold_4690:14243371-14243531 + TGGACCAGC----------------------------GCAACAACCTGCATCAGC----------------AA-------AT---------C-CATCACCACCA----------------------------------------C---CA---------ACAGCAGCAGCAGCAA--------------CAGCAG---C---A---G------CAGCAACAGCAGCAG---------------CAG---CAGC---AG---------CAGCAGCA-----------------------ACAGAAACA------GCAGCAGCA------------GCAG---CAGCAT-----------------------------------------------------------------------ATGCA-----------------------GCAACCATTTTCACCACCT--CGTCCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droGri2
ATTAGTAAC----------------------------TTATTAA------------TTAGC------------------------CATAATT-----------CACAT--------AACAACA---------------------A---TC---------A-----------------------------CAACAA---C---A---ACAGCAACGGCAACAGCAGCAG---------------CAG---------------------CAACAGCA-----------------------ACAGCAACA------GCAACAGCAGCAAAA------TGA------ACGCC--------------------TG--GTCGCA--------------------GCAGCCAA------TGGCCCAAGCC-----------------------GAGGCTATATCCGCCTTGT--GGGGCTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.......................................................................................................................................................................................................................GCAACAGCAGCAG---------------CAG---------------------CAACA.........................................................................................................................................................................................................21200.10220
.......................................................................................................................................................................................................................GCAACAGCAGCAG---------------CAG---------------------CAACAGCA-----------------------A..............................................................................................................................................................................25200.05110
droVir3
ATTAGCTAT----------------------------ATTGATA------------GCG---------------------------ACGATA-----------CACCG------------ACA---------------------A---GC---------ACAGCAGCAA--------------------CAGTTGCTGCTGCA---G------CAGCAACAACAACAG---------------CAA---CAGC---AG---------CAGCAGCA-----------------------ACAACAACA------ACGTCTGGA------------GCAA---CAACAT--------CGGGCCAAAAG-CTGG--C-----------------------------------------------------------C-----------------AATAT-----TTGT--TATTTTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................TGATA------------GCG---------------------------ACGATA-----------CACCG------------ACA---------------------A---GC---------..........................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................A---------------------A---GC---------ACAGCAGCAA--------------------CAGTT.......................................................................................................................................................................................................................................................................................1911.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................CAT--------CGGGCCAAAAG-CTGG--C-----------------------------------------------------------C-----------------AATAT-----TTGT--......2911.001000000000000000000000000000000000000000000000000000000000000010
..........................................TA------------GCG---------------------------ACGATA-----------CACCG------------ACA---------------------A---GC---------ACAGCAG...................................................................................................................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................T--------CGGGCCAAAAG-CTGG--C-----------------------------------------------------------C-----------------AAT...................2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................CAACAT--------CGGGCCAAAAG-CT........................................................................................................1911.001100000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................AA---CAACAT--------CGGGCCAAAAG-CTGG--....................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
.......AT----------------------------ATTGATA------------GCG---------------------------ACGATA-----------CACC..............................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................C---------ACAGCAGCAA--------------------CAGTTGCTGCT.................................................................................................................................................................................................................................................................................2260.171001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................GCTGCA---G------CAGCAACAACAACAG---------------C.....................................................................................................................................................................................................................................2360.171000100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................GC---------ACAGCAGCAA--------------------CAGTTGC.....................................................................................................................................................................................................................................................................................1980.131001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................AGCAACAACAACAG---------------CAA---CAGC---AG---------CAGCA.........................................................................................................................................................................................................2880.131000000000000000010000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................CAACAACAACAG---------------CAA---CAGC---AG---------C.............................................................................................................................................................................................................22200.102000000000000000000000000000000020000000000000000000000000000000
..........................................................................................................................................................................................................................................................AGC---AG---------CAGCAGCA-----------------------ACAACA.........................................................................................................................................................................19200.102000000000000000000000000000020000000000000000000000000000000000
....................................................................................................................................................................................................................................................AA---CAGC---AG---------CAGCAGCA-----------------------ACA............................................................................................................................................................................19200.102002000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................CAACAACAG---------------CAA---CAGC---AG---------C.............................................................................................................................................................................................................19200.102000000000000000000000000000000001000000000000000000000010000000
...................................................................................................................................................................................................................................G---------------CAA---CAGC---AG---------CAGCAGCA-----------------------ACAA...........................................................................................................................................................................22200.102001000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................CAG---------------CAA---CAGC---AG---------CAGCAGCA-----------------------AC.............................................................................................................................................................................22200.051000001000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................A---G------CAGCAACAACAACAG---------------CA....................................................................................................................................................................................................................................19200.051000000000000000010000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................G------CAGCAACAACAACAG---------------CAA---CA..............................................................................................................................................................................................................................21200.051000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................ACAACAACAG---------------CAA---CAGC---AG---------CAGC..........................................................................................................................................................................................................23200.051001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................CAACAG---------------CAA---CAGC---AG---------CAGCAGCA-----------------------A..............................................................................................................................................................................24200.051000000000000000100000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................CAACAG---------------CAA---CAGC---AG---------CAGCAGC.......................................................................................................................................................................................................22200.051000000000000000000000000000001000000000000000000000000000000000
.............................................................................................................................................................................................................................ACAACAG---------------CAA---CAGC---AG---------CAGCAGC.......................................................................................................................................................................................................23200.051000000000000000000000000000010000000000000000000000000000000000
..............................................................................................................................................................................................................G------CAGCAACAACAACAG---------------CAA---C...............................................................................................................................................................................................................................20200.051000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................CAACAG---------------CAA---CAGC---AG---------CAGCA.........................................................................................................................................................................................................20200.051000000000000000010000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................CAGC---AG---------CAGCAGCA-----------------------ACAACAACA------AC..............................................................................................................................................................25200.051000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................A---G------CAGCAACAACAACAG---------------CAA---CAG.............................................................................................................................................................................................................................23200.051000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................ACAACAG---------------CAA---CAGC---AG---------CAGCA.........................................................................................................................................................................................................21200.051000000000000000000000000000010000000000000000000000000000000000
.....................................................................................................................................................................................................................................................A---CAGC---AG---------CAGCAGCA-----------------------ACAACA.........................................................................................................................................................................21200.051000000000000000000000000000000100000000000000000000000000000000
..........................................................................................................................................................................................................A---G------CAGCAACAACAACAG---------------CAA---C...............................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................ACAACAACAG---------------CAA---CAGC---AG---------CAG...........................................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................AACAACAACAG---------------CAA---CAGC---AG---------CA............................................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................GC---AG---------CAGCAGCA-----------------------ACAACAACA------AC..............................................................................................................................................................23200.051000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................CAACAACAG---------------CAA---CAGC---AG---------CAG...........................................................................................................................................................................................................21200.051000000000000000010000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................AACAG---------------CAA---CAGC---AG---------CAGC..........................................................................................................................................................................................................18200.051000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................AACAACAG---------------CAA---CAGC---AG---------CAGCA.........................................................................................................................................................................................................22200.051000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................AACAACAG---------------CAA---CAGC---AG---------CA............................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
TGCAGCAGC----------------------------GCGTACA------------GCAGC--------------------AGCA-----------------------------------GCA---------------------G---CA---------T-----------------------------CAGCAG---C---A---A------CAGCAACAACAGCAG---------------CAG---CAGC---AG---------CAACAGCA-----------------------GCAGCAACA------GCAACAACA------------GCAA---CAGAAC--------------------ATG--GCCACGGCAAT------GG-----------------------CAGCGGGCA-----------------------TGCGCCATCATCCGCTCCT--GGCGCCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................................................................................................................A------CAGCAACAACAGCAG---------------CAG---CAGC---A........................................................................................................................................................................................................................24200.153200100
........................................................................................................................................................................................................................CAACAACAGCAG---------------CAG---CAGC---A........................................................................................................................................................................................................................20200.102000002
..................................................................................................................................................................................................G---C---A---A------CAGCAACAACAGCAG---------------CAG---CA..............................................................................................................................................................................................................................24200.102200000
.....................................................................................................................................................................................................................CAGCAACAACAGCAG---------------CAG---CAGC---.........................................................................................................................................................................................................................22200.102200000
.............................................................................................................................................................................................................................................................................ACAGCA-----------------------GCAGCAACA------GCAACAA.........................................................................................................................................................22200.102200000
......................................................................................................................................................................................................C---A---A------CAGCAACAACAGCAG---------------CAG---C...............................................................................................................................................................................................................................22200.102000020
..................................................................................................................................................................................................G---C---A---A------CAGCAACAACAGCAG---------------CAG---C...............................................................................................................................................................................................................................23200.051000010
..............................................................................................................................................................................................................A------CAGCAACAACAGCAG---------------CA....................................................................................................................................................................................................................................18200.051010000
......................................................................................................................................................................................................................AGCAACAACAGCAG---------------CAG---CAGC---AG---------CAACA.........................................................................................................................................................................................................28200.051100000
................................................................................................................................................................................................................................GCAG---------------CAG---CAGC---AG---------CAACAGCA-----------------------GCAGCAAC.......................................................................................................................................................................29200.051000010
.......................................................................................................................................................................................................................GCAACAACAGCAG---------------CAG---CAGC---.........................................................................................................................................................................................................................20200.051100000
................................................................................................................................................................................................................................................................................GCA-----------------------GCAGCAACA------GCAACAAC........................................................................................................................................................20200.051000010
.................................................................................AGCA-----------------------------------GCA---------------------G---CA---------T-----------------------------CAGCAG---C---A---...........................................................................................................................................................................................................................................................................19200.051100000
..........................................................................................................................................................................................................................ACAACAGCAG---------------CAG---CAGC---AG---------CAACA.........................................................................................................................................................................................................24200.051000001
............................................................................................................................................................................................................................AACAGCAG---------------CAG---CAGC---AG---------CAA...........................................................................................................................................................................................................20200.051010000
..................................................................................................................................................................................................................................................................................A-----------------------GCAGCAACA------GCAACAACA------------GCAA---C...................................................................................................................................24200.051100000
..........................................................................................................................................................................................................................ACAACAGCAG---------------CAG---CAGC---AG---------CAA...........................................................................................................................................................................................................22200.051010000
...............................................................................................................................................................................................GCAG---C---A---A------CAGCAACAACAGC.......................................................................................................................................................................................................................................................20200.051000010
..........................................................................................................................................................................................................A---A------CAGCAACAACAGCAG---------------CAG---CA..............................................................................................................................................................................................................................22200.051100000
................................................................................................................................................................................................................................................................AG---------CAACAGCA-----------------------GCAGCAACA------................................................................................................................................................................19200.051100000
..................................................................................................................................................................................................................................AG---------------CAG---CAGC---AG---------CAACAGCA-----------------------GCAGC..........................................................................................................................................................................24200.051100000
.................................................................................................................................................................................................AG---C---A---A------CAGCAACAACAGCAG---------------CAG---C...............................................................................................................................................................................................................................24200.051100000
..........................................................................................................................................................................................................................ACAACAGCAG---------------CAG---CAGC---AG---------CAACAGC.......................................................................................................................................................................................................26200.051010000
...............................................................................................................................................................................................GCAG---C---A---A------CAGCAACAACAGCAG---------------CAG---C...............................................................................................................................................................................................................................26200.051000010
droWil2
ATCAGCAAT----------------------------TGTCGCA------------TCAGC------------------------AACAACA-----------GGCAC--------TGCATCA------------------------------------GC--------------ATCATCAA------CAGCAG---C---A---A------CAGCAGCAGCAGCAG---------------CAA---C---AACAA---------CAACACCA-----------------------GCAACAT---------CAACAGCA------------GCA---GCAGCACCCGCACTC-------------CC-----------AGCTAAGCGG---------------------CGGCCCACAGG-----------------------CAACGCACTCCCACTCTGC--ACATCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
......................................................................................................................................................................................................C---A---A------CAGCAGCAGCAGCAG---------------C.....................................................................................................................................................................................................................................19200.45900090
.............................................................................................................................................................................................................................GCAGCAG---------------CAA---C---AACAA---------CAACACC.......................................................................................................................................................................................................23110.09101000
..........................................................................................................................................................................................................................................................................................................GCAACAT---------CAACAGCA------------GCA---GCAGCA...............................................................................................................................24110.09100010
....................................................................................................................................................................................................................................................AA---C---AACAA---------CAACACCA-----------------------GCAAC..........................................................................................................................................................................21130.08100010
.........................................................................................................................................................................................................................................................C---AACAA---------CAACACCA-----------------------GCAACA.........................................................................................................................................................................20200.05100010
......................................................................................................................................................................................................C---A---A------CAGCAGCAGCAGCAG---------------CAA---C---A...........................................................................................................................................................................................................................23200.05100001
.................................................................................................................................................................................................................................................................................CA-----------------------GCAACAT---------CAACAGCA------------GC.........................................................................................................................................19200.05100010
..................................................................................................................................................................................................G---C---A---A------CAGCAGCAGCAGCAG---------------......................................................................................................................................................................................................................................19200.05101000
.............................................................................................................................................................................................CAGCAG---C---A---A------CAGCAGCAGC..........................................................................................................................................................................................................................................................19200.05101000
dp5
ATTAGTAAC----------------------------TTATTAA------------TTAGC------------------------CATAATT-----------CGAGC---AGC-A----ACA---------------------G---CC---------A-----------------------------CAATCA---C---A---T------TAACAACAACAACAT---------------CAA---C------AA---------CAGCAACA-----------------------ACGCCCAGA------ACAACAGCC------------AGA---------A------------------G-CTG-----------AACGGGGCCT---------------------GGGGCCAGACG-----------------------GACACCATATCCGCCCTGT--GGGGCTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................................................................................................................................................................................................................G-----------AACGGGGCCT---------------------GGGGCCAGACG-----------------------...........................2211.0010000100000
...............................................................................................................................................................................................................................................................................................................................................GA---------A------------------G-CTG-----------AACGGGGCCT---------------------GGGGCCAGAC...................................................2711.0010010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................GACG-----------------------GACACCATATCCGCCCTGT--GGGGCT2911.0010100000000
.........................................TAA------------TTAGC------------------------CATAATT-----------CGAGC---AGC-A----ACA---------------------.........................................................................................................................................................................................................................................................................................................................................2711.0010000100000
droPer2
GATATCGAT----------------------------TTATACA------------GGGAC----ATTGAGTATCAACAACA--------------------------------------ACA---------------------G---CAAGACCATCAGG--------------------------------AG---C---A---G------CAGCAGCAGCAGCAG---------------CAGCAGC---AGCAG---------CAGCCGCA-----------------------GCAACAGCA------GCAATATCA------------GCA---------A------C--------------CAGCAGTACGCC-----------------ACCAGCAGACGCA--ATCAACC-----------------------------------TACCGCCCATT--GGAGCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................................................................................................GCAGCAGCAG---------------CAGCAGC---AGCAG---------..............................................................................................................................................................................................................22200.051010000
droAna3
AACAACAAC----------------------------AGCAACA---------------------------------------------TTTCTACCAGC---------------A----ACAGATACA---------------ACAACA---------AC--------------AACAACAA------CAACAA---C---A---G---------------CAGCAGCAGCAACAGCAACAGCAA---CAAC---AT---------CATCATCA---GCT---GCTAGCCACCGGCGGCAACAACA------GCAGCAGCA------------GC------AGCAG----------------------------------------------------------------------------------------------------------------CTTTAT--GCG--GSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.............................................................................................................................................................................................................................................CAACAGCAA---CAAC---AT---------CATCATCA---GC.................................................................................................................................................................................................2511.001010000
.........................................................................................................................CAGATACA---------------ACAACA---------AC--------------AACAACAA------CAAC........................................................................................................................................................................................................................................................................................2811.001010000
......AAC----------------------------AGCAACA---------------------------------------------TTTCTACCAGC---------------A----.................................................................................................................................................................................................................................................................................................................................................................2211.001100000
...........................................................................................................................................................................................................................................................................CATCATCA---GCT---GCTAGCCACCGGC................................................................................................................................................................................2411.001100000
............................................................................................................................................................................................................................................................................................................AACAACA------GCAGCAGCA------------GC------A..................................................................................................................................19200.204000004
..............................................................................................................................................................................................................................................................................................................CAACA------GCAGCAGCA------------GC------AGC................................................................................................................................19200.153030000
.................................................................................................................................................................................................AA---C---A---G---------------CAGCAGCAGCAACAGC...........................................................................................................................................................................................................................................21200.153021000
..........................................................................................................................................................................................................................................................................................................GCAACAACA------GCAGCAGCA------------GC------...................................................................................................................................20200.153021000
..................................................................................................................................................................................AACAA------CAACAA---C---A---G---------------CAGCAGC....................................................................................................................................................................................................................................................21200.153030000
..........................................................................................................................................................................................................................................................................................................GCAACAACA------GCAGCAGCA------------GC------AGC................................................................................................................................23200.102020000
.............................................................................................................................................................................................................................................................................................................ACAACA------GCAGCAGCA------------GC------AGC................................................................................................................................20200.102020000
.................................................................................................................................................................................CAACAA------CAACAA---C---A---G---------------CAGC.......................................................................................................................................................................................................................................................19200.102020000
................................................................................................................................................................................................CAA---C---A---G---------------CAGCAGCAGCAACAGC...........................................................................................................................................................................................................................................22200.102020000
............................................................................................................................................................................................................................................................................................................AACAACA------GCAGCAGCA------------GC------AGCAG----------------------------------------------------------------------------------------------------------------C.............24200.102011000
....................................................................................................................................................................................CAA------CAACAA---C---A---G---------------CAGCAGCAGC.................................................................................................................................................................................................................................................22200.102010001
...............................................................................................................................................................................AACAACAA------CAACAA---C---A---G---------------CAGCAGCAGC.................................................................................................................................................................................................................................................27190.051100000
.....................................................................................................................................................A---------AC--------------AACAACAA------CAACAA---C---A---G---------------CAGCAGC....................................................................................................................................................................................................................................................27190.051010000
.....................................................................................................................................................................................AA------CAACAA---C---A---G---------------CAGCAGCAG..................................................................................................................................................................................................................................................20200.051000001
...............................................................................................................................................................................AACAACAA------CAACAA---C---A---G---------------CAGCAGC....................................................................................................................................................................................................................................................24200.051010000
...............................................................................................................................................................................................ACAA---C---A---G---------------CAGCAGCAGCAACA.............................................................................................................................................................................................................................................21200.051000010
................................................................................................................................................................................ACAACAA------CAACAA---C---A---G---------------CAGCAGC....................................................................................................................................................................................................................................................23200.051000001
..................................................................................................................................................................................................................................AGCAGCAACAGCAACAGCA....................................................................................................................................................................................................................................19200.051001000
..............................................................................................................................................................................................AACAA---C---A---G---------------CAGCAGCAGCAAC..............................................................................................................................................................................................................................................21200.051000001
..............................................................................................................................................................................................................................CAGCAGCAGCAACAGCAACAGC.....................................................................................................................................................................................................................................22200.051010000
....................................................................................................................................................................................................................................CAGCAACAGCAACAGCAA---CAAC---.........................................................................................................................................................................................................................22200.051010000
.............................................................................................................................................................................................................................................................................................................ACAACA------GCAGCAGCA------------GC------A..................................................................................................................................18200.051010000
...................................................................................................................................................................................ACAA------CAACAA---C---A---G---------------CAGCAGCAGCA................................................................................................................................................................................................................................................24200.051000001
..................................................................................................................................................................................................A---C---A---G---------------CAGCAGCAGCAACAGCAA.........................................................................................................................................................................................................................................22200.051100000
................................................................................................................................................................C--------------AACAACAA------CAACAA---C---A---G---------------C..........................................................................................................................................................................................................................................................19200.051010000
......................................................................................................................................................................................A------CAACAA---C---A---G---------------CAGCAGCAGCAACA.............................................................................................................................................................................................................................................24200.051000001
.......................................................................................................................................................................................................................................CAACAGCAACAGCAA---CAA.............................................................................................................................................................................................................................18200.051001000
..............................................................................................................................................................................................AACAA---C---A---G---------------CAGCAGCAGCAACA.............................................................................................................................................................................................................................................22200.051100000
..................................................................................................................................................................................................................................AGCAGCAACAGCAACAGCAA---C...............................................................................................................................................................................................................................21200.051010000
......................................................................................................................................................................................A------CAACAA---C---A---G---------------CAGCAGCAGC.................................................................................................................................................................................................................................................20200.051010000
..................................................................................................................................................................................................A---C---A---G---------------CAGCAGCAGCAACAGCAACA.......................................................................................................................................................................................................................................24200.051010000
.....................................................................................................................................................................................AA------CAACAA---C---A---G---------------CAGCAGCAGCA................................................................................................................................................................................................................................................22200.051000001
...................................................................................................................................................................................ACAA------CAACAA---C---A---G---------------CAGCAGCAGC.................................................................................................................................................................................................................................................23200.051010000
...................................................................................................................................................................................................................................GCAGCAACAGCAACAGCAA---C...............................................................................................................................................................................................................................20200.051010000
................................................................................................................................................................................ACAACAA------CAACAA---C---A---G---------------CAGCAGCAGC.................................................................................................................................................................................................................................................26200.051010000
................................................................................................................................................ACAACA---------AC--------------AACAACAA------CAACAA---C---A---G---------------C..........................................................................................................................................................................................................................................................26200.051010000
...........................................................................................................................................................................................................................................................................................................CAACAACA------GCAGCAGCA------------GC------AGC................................................................................................................................22200.051010000
....................................................................................................................................................................................CAA------CAACAA---C---A---G---------------CAGCAGCAGCAAC..............................................................................................................................................................................................................................................25200.051010000
...............................................................................................................................................................................AACAACAA------CAACAA---C---A---G---------------CAGC.......................................................................................................................................................................................................................................................21200.051010000
droBip1
ATCAGCAGC----------------------------ACCAGCA------------GCA-------------------------------------------------------------------------------------T---CA---------ACAGCATCAGCAGCAC--------------CAGCAG---C---A---C------CAGCAACATCAACAG---------------CAT---CAGC---AG---------CACCAGCA-----------------------GCATCAACA------GCATCAGCA------------GCA---------A------------------G---------GCG---GTGT-GTCCGTCTCCCAGCAGCAGATGGTGCCGGTCAG-----------------------------TGTGGCTGCCGCCCTGCAGGTGGCTSizeHit CountTotal NormTotal
No Reads
droKik1
AAAATAATTAGAGTAG-----------------AAA------AA------------GCT---------------------------AGCAAA-----------GAGCC--------------A------------------------------------GA--------------AGCAGCAGCAGCAACAGCAT---C---C---C------CAGCAGCAGCAGCAG---------------CAA---CATC---CC---------CAGCAGCA---GCTGCAACCTC---C------------CA------GCAGCAGCT------------GCA---------AC----------------------------------------------------------------CTCCCCAAGCG-----------------------ACAACTACACACCTTTTTG--GTGGCTSizeHit CountTotal NormTotal
No Reads
droFic1
TGCTCACTCCCATTCC-----------------CATCACGCACA------------GCAGC--------------------AACA------------------G---------C-A----ACA---------------------G---CA---------A-----------------------------CAGCAA---C---ATCAG------CAGCAGCAACAGCAA------------CAGCAA---C------AACAGCAGCAACAGC---A---------CCTTC---A--TCATCACCATCAGCAACATGGGCA---------------GCA---TCA----------------------------------------------------------------------------------------------------------GCAACATTTGACGCCA--GCGGCTSizeHit CountTotal NormTotal
No Reads
droEle1
AGTCGCAAC----------------------------ATCTACA------------ATAAT----CCCTATATTCCGCAGCA--------------------------------------GCA---------------------G---CA---------A-----------------------------CAGCAA---C---A---G------CAGCAACAGCAGCAGCAACAG---------C------------AG---------CAGCAGCA-----------------------GCAGCAACA------GCAACAGCTGCA---------GCA---------G------------------AC-GC------------------------------AAC------------AGCG----CACCGCCCACCTGTTCAAGGCGT-TGGCTGCCTCC-------------GCSizeHit CountTotal NormTotal
No Reads
droRho1
ATTAATACCC------ATTTCGTTTTAGCAAAT----TCAACAA----CAGCAGCAAC-----------------------A---------------------A---C-------A----GCAGCAGCA---------------A---CA---------ACAA--------------------------CAGCAG---C---A---G------CAACAACAGCAGCAGCAACAACAGCAGCAGCAA---C------AA---------CAACAGCA-----------------------GCAGCAACA------ACAGCAGCA------------GCAA---CA--------------------------------------------------------------------------------------------------------------------ACAACA--GCAGCASizeHit CountTotal NormTotal
No Reads
droBia1
ATTTGTAAA------------------------TAAATTAGAT------------------------------------------CGTGATT-----------ATGGCAACATCA-----ATA---------------------T---CG---------C-----------------------------CAGCAA---C---A---T---------CAACATCAGCAG---------------CGG---CAGCAGCAG---------CAACGGCAACAGCAACAGGCAT--CC------CCGCAGCA------GCAACATTA------------TTA---------A--------------------CCGG--C-----------------------------------------------------------C-----------------AGTGTCTGGCATGT--GTGGCTSizeHit CountTotal NormTotal
No Reads
droTak1
GGGAATGCAA------C--------------------TCAAGGT------------GGAGA------------------------CACTGC--------------CCC--------------A------------------------------------GC--------------AGCAGCAA------CAGCAA---C---A---GCAGCAACAGCTGCAGCAGCAG---------------CAA---------------------CAACACCA-----------------------ACAGCAG---------CAGCAGCA------------GCA---ACATGCCTCGCAATC-------------CC-AGGGACGAA--GCCAAGCGG-----------------------------------------------------------CGGTGAGCAGCATGT--CCTCCGSizeHit CountTotal NormTotal
No Reads
droEug1
TGCAGCAGCCGCCTAC-----------------CAAAATCAACA------------GCAGC--------------------AGCA-----------------------------------GCA---------------ACAACAA---CA---------G-----------------------------CAGCAG---C---A---A------CAGCAACAGCAGCAG---------------CAG---C---AACAC---------CACCAGCA-----------------------GCAACAACA------ACAGCAGCA------------GCAA------CAAC------------------------AGCACGGCAAACA-------------------------------GA------GCAGCTCACC-----------------CGCACCCAATGTG---GGCGGTSizeHit CountTotal NormTotal
No Reads
dm3
T-CAGCAAT----------------------------TAATTAA----------------T----GC------------------CAACAGT-----------CCGGC--------------A---------------GCAACAT---CA---------A-----------------------------CAGCAG---C---A---A------CAGCAACAGCAGCAG---------------CAG---C---AACAG---------CAGCAGCA-----------------------GCTACAGCA------GCAACATCAGCAACATGAACAAA--------------------------------AA--GCTGCA-----------------------AC------------AAT------GCCGCCTGCC------------AGCGCTAA---------------ATTCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................A--GCTGCA-----------------------AC------------AAT------GCCGCCTGCC------------...........................2213.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................CCGGC--------------A---------------GCAACAT---CA---------A-----------------------------CAGCAG---C---A---A------CAGA................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................ACAG---------CAGCAGCA-----------------------GCTACAGC.......................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
..............................................................................................................................................CAT---CA---------A-----------------------------CAGCAG---C---A---A------CAGCA...............................................................................................................................................................................................................................................................2060.3320000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
....................................................................................................................................................................................................................................................AG---C---AACAG---------CAGCAGCA-----------------------GC.............................................................................................................................................................................18200.3060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................ACAT---CA---------A-----------------------------CAGCAG---C---A---A------CAGCA...............................................................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................GC--------------A---------------GCAACAT---CA---------A-----------------------------CAGCAG---C---A---A------....................................................................................................................................................................................................................................................................2250.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................A---A------CAGCAACAGCAGCAG---------------CA....................................................................................................................................................................................................................................19200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000004000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................A-----------------------------CAGCAG---C---A---A------CAGCAACA............................................................................................................................................................................................................................................................18200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000200000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................A------CAGCAACAGCAGCAG---------------CAG---C---AACAG---------C.............................................................................................................................................................................................................2660.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................AGCAGCAG---------------CAG---C---AACAG---------CAGCA.........................................................................................................................................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000
.............................................................................................................................................................................................................................GCAGCAG---------------CAG---C---AACAG---------CAGCAGCA-----------------------...............................................................................................................................................................................24200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
.............................................................................................................................................................................................................................GCAGCAG---------------CAG---C---AACAG---------CAGCAG........................................................................................................................................................................................................22200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000100000000000000000000000
..........................................................................................................................................GCAACAT---CA---------A-----------------------------CAGCAG---C---A---...........................................................................................................................................................................................................................................................................18200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.........................................................................................................................................................................................................................AACAGCAGCAG---------------CAG---C---AACAG---------C.............................................................................................................................................................................................................21200.1530000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000
.........................................................................................................................................................................................................................AACAGCAGCAG---------------CAG---C---AACAG---------CAGCAGCA-----------------------...............................................................................................................................................................................28140.1420000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.........................................................................................................................................................................................................................AACAGCAGCAG---------------CAG---C---AACAG---------CAGCAGC.......................................................................................................................................................................................................27160.1320000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................A---------------GCAACAT---CA---------A-----------------------------CAGCAG---C---A---A------C...................................................................................................................................................................................................................................................................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................CAT---CA---------A-----------------------------CAGCAG---C---A---A------CAG.................................................................................................................................................................................................................................................................1880.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................ACAGCAGCAG---------------CAG---C---AACAG---------CAGC..........................................................................................................................................................................................................23200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................C---A---A------CAGCAACAGCAGCAG---------------CA....................................................................................................................................................................................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000
.....................................................................................................................................................A---------A-----------------------------CAGCAG---C---A---A------CAGCAACA............................................................................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................AGCAG---------------CAG---C---AACAG---------CAGCA.........................................................................................................................................................................................................19200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................AG---C---A---A------CAGCAACAGCAGCAG---------------C.....................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................CAG---C---A---A------CAGCAACAGCAGCAG---------------......................................................................................................................................................................................................................................21200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................C---A---A------CAGCAACAGCAGCAG---------------CAG---C---AACA........................................................................................................................................................................................................................26200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................A------CAGCAACAGCAGCAG---------------CA....................................................................................................................................................................................................................................18200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................C---A---A------CAGCAACAGCAGCAG---------------CAG---C---............................................................................................................................................................................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................AGCAG---------------CAG---C---AACAG---------CAGCAGCA-----------------------GC.............................................................................................................................................................................24200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................GCAACAGCAGCAG---------------CAG---C---AACAG---------CAGCAGC.......................................................................................................................................................................................................29110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................CAACAT---CA---------A-----------------------------CAGCAG---C---A---A------....................................................................................................................................................................................................................................................................18140.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................GC--------------A---------------GCAACAT---CA---------A-----------------------------CAGCAG---C---...............................................................................................................................................................................................................................................................................20150.0710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................A-----------------------------CAGCAG---C---A---A------CAGCAACAGCAGCA......................................................................................................................................................................................................................................................24160.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................GC--------------A---------------GCAACAT---CA---------A-----------------------------CAGCAG---...................................................................................................................................................................................................................................................................................19180.0610000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................GCAG---C---A---A------CAGCAACAGCAGCAG---------------CA....................................................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................CAGCAACAGCAGCAG---------------CAG---C---AACAG---------C.............................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................A---A------CAGCAACAGCAGCAG---------------CAG---C---A...........................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................AGCAGCAG---------------CAG---C---AACAG---------CAGCAGCA-----------------------GC.............................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................AGCAG---C---A---A------CAGCAACAGCAGCAG---------------CAG---C---............................................................................................................................................................................................................................27200.0510000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................CAGCAGCAG---------------CAG---C---AACAG---------CA............................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................CAGCAG---C---A---A------CAGCAACAGCAGCA......................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................A---A------CAGCAACAGCAGCAG---------------CAG---................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................CAGCAG---------------CAG---C---AACAG---------CAGCA.........................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................AGCAACAGCAGCAG---------------CAG---C---AAC.........................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................AACAGCAGCAG---------------CAG---C---AACAG---------CAGC..........................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................ACAGCAGCAG---------------CAG---C---AACA........................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................CAGCAACAGCAGCAG---------------CAG---C---A...........................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................AGCAG---------------CAG---C---AACAG---------CAGCAGCA-----------------------...............................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................A------CAGCAACAGCAGCAG---------------CAG---C---AA..........................................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................C--------------A---------------GCAACAT---CA---------A-----------------------------CAGCAG---C---...............................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................AGCAGCAG---------------CAG---C---AACAG---------CAGCAGC.......................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................A---A------CAGCAACAGCAGCAG---------------CAG---C---............................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................AACAGCAGCAG---------------CAG---C---AACAG---------CAGCA.........................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..................................................................................................................................................................................................................................AG---------------CAG---C---AACAG---------CAGCAGCA-----------------------GC.............................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...........................................................................................................................................................................................................................CAGCAGCAG---------------CAG---C---AACAG---------C.............................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................CAG---------------CAG---C---AACAG---------CAGCAGCA-----------------------...............................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................AG---C---A---A------CAGCAACAGCAGCA......................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................A---A------CAGCAACAGCAGCAG---------------C.....................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................CAGCAG---------------CAG---C---AACAG---------CAGCAG........................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
................................................................................................................................................................................................CAG---C---A---A------CAGCAACAGCAGCA......................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................GCAACAGCAGCAG---------------CAG---C---AAC.........................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................AGCAGCAG---------------CAG---C---AACAG---------CAGC..........................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................A---------------GCAACAT---CA---------A-----------------------------CAGCAG---C---...............................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................CAGCAG---C---A---A------CAGCAACAGCA.........................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................C---A---A------CAGCAACAGCAGCAG---------------CAG---C---A...........................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................................................................................................................................CAGCAG---C---A---A------CAGCAACAGCAG........................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................CA---------A-----------------------------CAGCAG---C---A---A------CAGCAA..............................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.............................................................................................................................................................................................CAGCAG---C---A---A------CAGCAACAGCAGCAG---------------A.....................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................GCAG---C---A---A------CAGCAACAGCAGCAG---------------CAG---C---............................................................................................................................................................................................................................26200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................AGCAG---C---A---A------CAGCAACAGCA.........................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................CAGCAACAGCAGCAG---------------CAG---C---AACAG---------..............................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................CAGCAG---C---A---A------CAGCAACAGCAGCAG---------------C.....................................................................................................................................................................................................................................25200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................ACAGCAGCAG---------------CAG---C---AACAG---------CAG...........................................................................................................................................................................................................22200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................AGCAACAGCAGCAG---------------CAG---C---AACAG---------C.............................................................................................................................................................................................................24200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droSim2
GTGC-CGCC----------------------------CACCGGA---------------------------------------------GGCCCGCCGTCAACACCCCAGCAGCA-----ACA---------------------A---CA---------A-----------------------------CAGCAG---C---A---A------CAGCAACAGCAGCAG---------------CAA---C---AACAG---------CAACAGCAGCAGCAACAGGCGT---C--------G-AACG------GCGGCAACA------------GCA---------ATGCCACGCC------------CGC--C-----------------------------------------------------------C-----------------AAAGTCCG--ACGA--GGAGCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................................................................CA---------------------A---CA---------A-----------------------------CAGCAG---C---A---A------CAGCA...............................................................................................................................................................................................................................................................20202.7054000054000000000000
...............................................................................................................AGCA-----ACA---------------------A---CA---------A-----------------------------CAGCAG---C---A---A------C...................................................................................................................................................................................................................................................................21161.0016000016000000000000
.....................................................................................................................................................................................................................................................................................AGCAACAGGCGT---C--------G-AACG------GC..............................................................................................................................................................2011.00100100000000000000
...............................................................................................................................................................................................................................................................................AGCAGCAGCAACAGGCGT---.....................................................................................................................................................................................1820.50100000000001000000
......................................................................................................................................................................................................C---A---A------CAGCAACAGCAGCAG---------------......................................................................................................................................................................................................................................18200.05100010000000000000
droSec2
GCTGGCAAC----------------------------AACA-CT----TGCCAAC----------------AA----------------TTCCCATCATCAACACTTGAGC---------GCAACAGCAGCAGAGACAGCCGCAG---CA---------G-----------------------------CAGCAG---C---A---A------CAGCAACTGCAGCAG---------------CAG---C---AACTG---------CAGCAGCA-----------------------GCAGCAACA------GCAACTGCA------------GCAGCAACAGCAA-------------------------------------------------------C-------------------------------------------------------CATGTTG--CTGACTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................................CATCAACACTTGAGC---------GCAACAGC.........................................................................................................................................................................................................................................................................................................................................................2311.0010010
........................................................................................................................GCAACAGCAGCAGAGACAGCC............................................................................................................................................................................................................................................................................................................................................2111.0010010
..............................................................................................................................................................................................................................CAGCAG---------------CAG---C---AACTG---------CAGCAGCA-----------------------GCA............................................................................................................................................................................2690.1110010
................................................................................................................................................................................................................................GCAG---------------CAG---C---AACTG---------CAGCAGCA-----------------------GCA............................................................................................................................................................................24150.0710010
.................................................................................................................................................................................................................................................................................................................CA------GCAACTGCA------------GCAGCAACA..................................................................................................................................20180.0610010
..............................................................................................................................................................................................................A------CAGCAACTGCAGCAG---------------CA....................................................................................................................................................................................................................................18200.0510010
................................................................................................................................................................................................................................................................................................................ACA------GCAACTGCA------------GCAGCA.....................................................................................................................................18200.0510010
.................................................................................................................................................................................................................................CAG---------------CAG---C---AACTG---------CAGCAGCA-----------------------GC.............................................................................................................................................................................22200.0510010
droYak3
ATTGGCAAT----------------------------TTGAAT--------CAG--GTGAATATGACTGACTTTCAACAACA--------------------------------------ACA---------------------G---CA---------A-----------------------------CAGCAGCAGC---A---G------CAGCAACAACAGCAG---------------CAG---CAAC---AG---------CAGCAGCA-----------------------ACAACAACA------GCAGCAACA------------GCA---------A------------------AC-AC------------------------------AACAGACGCT--CTGATCGGA----------------CCGAAGTCT-----TAGATCCACCTT--------GTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................................................................A-----------------------ACAACAACA------GCAGCAACA------------GCA---------A------------------AC-A........................................................................................................2611.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................AACAGACGCT--CTGATCGGA----------------CCGAAGT.............................2611.00100000010000
..............................................................................................................................................................................................................................................................................................................................................GCA---------A------------------AC-AC------------------------------AACAGACGCT--CTGATC.......................................................2411.00110000000000
..........................................................................................................................................................................................................................................................................................................................................................A------------------AC-AC------------------------------AACAGACGCT--CTGATCGGA----------------C...................................2511.00100001000000
............................................................................................................................................................................................................................................................................................................................................................................................................................CTGATCGGA----------------CCGAAGTCT-----TAGAT.................2311.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................AACAGACGCT--CTGATCGGA----------------CCGA................................2311.00100010000000
................................................................................................................................................................................................................................................................................................................................................................................................................AACAGACGCT--CTGATCGGA----------------CCGAA...............................2411.00100000010000
..............................................................................AACA--------------------------------------ACA---------------------G---CA---------A-----------------------------CAGCAGCAGC---A---G------CAGC................................................................................................................................................................................................................................................................2740.25100100000000
................................................................................................................................................................................................................................................................AG---------CAGCAGCA-----------------------ACAACAACA------GCAGCAAC........................................................................................................................................................2790.11100000000001
.....................................................................................................................................................................................................GC---A---G------CAGCAACAACAGCAG---------------CA....................................................................................................................................................................................................................................21200.10202000000000
.................................................................................................................................................................................................................................................................................CA-----------------------ACAACAACA------GCAGCAACA------------GC.........................................................................................................................................22180.06100100000000
..............................................................................................................................................................................................................G------CAGCAACAACAGCAG---------------CAG---CAAC---AG---------CAGC..........................................................................................................................................................................................................29180.06100100000000
...............................................................................................................................................................A-----------------------------CAGCAGCAGC---A---G------CAGCA...............................................................................................................................................................................................................................................................18200.05100010000000
...............................................................................................................................................................A-----------------------------CAGCAGCAGC---A---G------CAGCAACAACAGC.......................................................................................................................................................................................................................................................26200.05100100000000
................................................................................................................................................G---CA---------A-----------------------------CAGCAGCAGC---A---G------CAGCA...............................................................................................................................................................................................................................................................21200.05100001000000
................................................................................................................................................................................................CAGCAGC---A---G------CAGCAACAACAGCAG---------------C.....................................................................................................................................................................................................................................25200.05100000000001
...................................................................................................................................................................................................................................G---------------CAG---CAAC---AG---------CAGCAGCA-----------------------...............................................................................................................................................................................18200.05100100000000
.........................................................................................................................................................................................................................................................CAAC---AG---------CAGCAGCA-----------------------ACAACAACA------GCA.............................................................................................................................................................26200.05101000000000
..........................................................................................................................................................................................................A---G------CAGCAACAACAGCAG---------------CAG---CAAC---AG---------C.............................................................................................................................................................................................................27200.05100100000000
..............................................................................................................................................................................................................G------CAGCAACAACAGCAG---------------CAG---CAAC---AG---------C.............................................................................................................................................................................................................26200.05101000000000
..............................................................................................................................................................................................................G------CAGCAACAACAGCAG---------------CAG---CAAC---.........................................................................................................................................................................................................................23200.05101000000000
..................................................................................................................................................................................................GCAGC---A---G------CAGCAACAACAGCAG---------------......................................................................................................................................................................................................................................22200.05101000000000
droEre2
TGGACCAGC----------------------------GCAACAACCTGCATCAGC----------------AA-------AT---------C-CATCACCACCA----------------------------------------C---CA---------ACAGCAGCAGCAGCAA--------------CAGCAG---C---A---G------CAGCAACAGCAGCAG---------------CAG---CAGC---AG---------CAGCAGCA-----------------------ACAGAAACA------GCAGCAGCA------------GCAG---CAGCAT-----------------------------------------------------------------------ATGCA-----------------------GCAACCATTTTCACCACCT--CGTCCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................................................................................................AG---CAGC---AG---------CAGCAGCA-----------------------ACAGAAACA------GCA.............................................................................................................................................................2811.0010000010
......................................................C----------------AA-------AT---------C-CATCACCACCA----------------------------------------C---CA---------ACAGCAGC..................................................................................................................................................................................................................................................................................................................2811.0010100000
................................................................................................................................................................................................................................................................................GCA-----------------------ACAGAAACA------GCAGCAGCA------------GC.........................................................................................................................................2311.0010000100
............................................................................................................................................................................................................................................................................AGCAGCA-----------------------ACAGAAACA------GCAGCA..........................................................................................................................................................2211.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................TGCA-----------------------GCAACCATTTTCACCACCT--CG....2511.0011000000
..............................................................................................ATCACCACCA----------------------------------------C---CA---------ACAGCA....................................................................................................................................................................................................................................................................................................................1920.5010000100
.................................................................................................................................................................................................................................................................G---------CAGCAGCA-----------------------ACAGAAACA------GCA.............................................................................................................................................................2120.5010000010
..................................................................................................................................................................................................................................................................................A-----------------------ACAGAAACA------GCAGCAGCA------------GCA........................................................................................................................................2220.5010000100
..................................................................................................................................................................................................................................AG---------------CAG---CAGC---AG---------CAGCAGCA-----------------------...............................................................................................................................................................................19200.2550000050
.............................................................................................................................................................................................................................................................................GCAGCA-----------------------ACAGAAACA------GCA.............................................................................................................................................................1850.2010000010
..........................................................................................................................................................................................................................................................AGC---AG---------CAGCAGCA-----------------------ACAGAA.........................................................................................................................................................................19180.0610000100
..................................................................................................................................................................................................G---C---A---G------CAGCAACAGCAGCAG---------------C.....................................................................................................................................................................................................................................20200.0511000000
.....................................................................................................................................................A---------ACAGCAGCAGCAGCAA--------------CAGCAG---C---A---...........................................................................................................................................................................................................................................................................25200.0510001000
...............................................................................................................................................................ACAGCAGCAGCAGCAA--------------CAGC........................................................................................................................................................................................................................................................................................20200.0511000000
............................................................................................................................................................................CAA--------------CAGCAG---C---A---G------CAGCAACAGCA.........................................................................................................................................................................................................................................................23200.0510000010
.........................................................................................................................................................................................................................AACAGCAGCAG---------------CAG---CAGC---AG---------C.............................................................................................................................................................................................................21200.0510001000
..............................................................................................................................................................................................AGCAG---C---A---G------CAGCAACAGCAGCA......................................................................................................................................................................................................................................................22200.0510000100
.............................................................................................................................................................................................CAGCAG---C---A---G------CAGCAACAGC..........................................................................................................................................................................................................................................................19200.0510000010
.....................................................................................................................................................................GCAGCAGCAA--------------CAGCAG---C---A---G------CA..................................................................................................................................................................................................................................................................21200.0510001000
.....................................................................................................................................................A---------ACAGCAGCAGCAGCAA--------------CAGCAG---C---...............................................................................................................................................................................................................................................................................24200.0510000010
......................................................................................................................................................................................................................AGCAACAGCAGCAG---------------CAG---CAGC---AG---------CA............................................................................................................................................................................................................25200.0510000010
.........................................................................................................................................................................................................................................................CAGC---AG---------CAGCAGCA-----------------------ACAGA..........................................................................................................................................................................19200.0510001000
.....................................................................................................CCA----------------------------------------C---CA---------ACAGCAGCAGCA..............................................................................................................................................................................................................................................................................................................18200.0510000010
.....................................................................................................................................................................GCAGCAGCAA--------------CAGCAG---C---A---G------C...................................................................................................................................................................................................................................................................20200.0511000000

Generated: 05/17/2015 at 10:08 PM