dgr_20

AGCATTCGTGGCGGGGAATCTGAGTGAGCCCGAGGATGCATCTGGTAACTAGCCGTTCCTGTGTAGCCAAATAGTTGGTAGCACGATTGTTATTTGGCACATCAGTGACTGCTGGTTAACGGTGAGCGCACAACAACCGCCAGAGGATCATTATCTTAAAGGGATG *********************************.(((..(((.((((((((.(((.((((((.((((((((((((......))))...))))))))))).))).))).)))))))).)))...)))..**********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V109 male body	M041 female body
............................................................................................TTTGGCACATCAGTGACTGCTGG...................................................	23	0	1	7.00	7	7	0
.................ATCGGCGTGAGCCCCAGGA..................................................................................................................................	19	3	6	5.83	35	1	34
..............................................................................................TGGCACATCAGTGACTGCTGGT..................................................	22	0	1	4.00	4	4	0
......................................................................................................................................AACCGCAAAAGGCTCATTAT............	20	3	19	3.11	59	3	56
.............................................................................................TTGGCACATCAGTGACTGCTGG...................................................	22	0	1	3.00	3	3	0
............................................................................................TTTGGCACATCAGTGACTGCTG....................................................	22	0	1	1.00	1	1	0
..................................................AGCCGTTCCTGTGTAGCCAAATA.............................................................................................	23	0	1	1.00	1	1	0
.............................................................................................TTGGCACATCAGTGACTGCTGGT..................................................	23	0	1	1.00	1	1	0
.............................................................................................TTGGCACATCAGTGACTGCTGGTT.................................................	24	0	1	1.00	1	1	0
.............................................................................................TTGGCACATCAGTGAATGCTGGA..................................................	23	2	1	1.00	1	1	0
.............................................................................................TTGGCACATCAGTGACTGCCGG...................................................	22	1	1	1.00	1	1	0
............................................................................................TTTGGCACATCAGTGACTG.......................................................	19	0	1	1.00	1	1	0
..................................................AGCCGTTCCTGTGTAGCCAAAT..............................................................................................	22	0	1	1.00	1	1	0

Species	Coordinate	ID	Type	Alignment
droGri2	scaffold_15081:2041111-2041276 -	dgr_20	candidate-rescued	AGCATTCGTGGCGG-----------GGAATCTGAGTGAG-CCCGA--------GGATGCATCTGGTAACTAGCCGTTCCTGTGTAGCCAAATAGTTGGTAGCAC-------------------GATTGTTATTTGGCACATCAGTGACTGCTGGTTAACGGTGAGCGCACAACAACCGC---CAGAGG---ATCATTATCTTAAAGGGATG
droVir3	scaffold_13042:902968-903171 -	dvi_45	confident	GATAACGATAACGATAACAATAACGATAACTTAAGCGAT-AACGATA-ACGATAAGCGCATCTGGTGACTAGCCGTTCCTGAAGTGTCAAATAGTAGGTACTACTCGTAAGAAAATGTACGTTGATTTTTATTTGGCACATCAGTGACAGCATGTTACGAGTAATTGCACAACAGCCACAGCCGGAGACAGAT-----CCGGAGACAGATG
droMoj3	scaffold_6328:2897605-2897757 -	dmo_206	confident	ATCGATTT------------------------GGGCGGTCATCGATAGACAATGCGCGCATCTGGTGACTAGCTGTTCCTGAAGTGTCAAATAGTGAGTACTACTCGTAAGAAAATGTACGTTGATTTTTATTTGGCACATCAGTGACAGCATGTCACGAGTAATTGCACAACGACC----------------------------------
droAna3	scaffold_13417:2460897-2461010 -	dan_75	confident	TGCAGACGT-----------------------------------------------CGCGTCCCGTGACGGGCAGTTCCTGAACTGTCAAATAGTGGACGGCAT-------------------AA-ACATATTTGGCACGTCAGTAACAGCCTGTTACAAGTCAGCGCACGACCAGCAC---TA---------------------------
droBip1	scf7180000395874:32919-33024 -			TGCAAACGT-----------------------------------------------CGCGTCCCGTGACGGGCAGTTCCTGAACTGTCAAATAGTGGACGGCAT-------------------AA-ACATATTTGGCACGTCAGTAACAGCCTGTTACAAGACAGCGCACGAC--------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droGri2

AGCATTCGTGGCGG-----------GGAATCTGAGTGAG-CCCGA--------GGATGCATCTGGTAACTAGCCGTTCCTGTGTAGCCAAATAGTTGGTAGCAC-------------------GATTGTTATTTGGCACATCAGTGACTGCTGGTTAACGGTGAGCGCACAACAACCGC---CAGAGG---ATCATTATCTTAAAGGGATG	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
...................................................................................................................................TTTGGCACATCAGTGACTGCTGG.........................................................	23	1	7.00	7	0	7
.....................................................................................................................................TGGCACATCAGTGACTGCTGGT........................................................	22	1	4.00	4	0	4
....................................................................................................................................TTGGCACATCAGTGACTGCTGG.........................................................	22	1	3.00	3	0	3
...................................................................................................................................TTTGGCACATCAGTGACTGCTG..........................................................	22	1	1.00	1	0	1
......................................................................AGCCGTTCCTGTGTAGCCAAATA......................................................................................................................	23	1	1.00	1	0	1
....................................................................................................................................TTGGCACATCAGTGACTGCTGGT........................................................	23	1	1.00	1	0	1
....................................................................................................................................TTGGCACATCAGTGACTGCTGGTT.......................................................	24	1	1.00	1	0	1
...................................................................................................................................TTTGGCACATCAGTGACTG.............................................................	19	1	1.00	1	0	1
......................................................................AGCCGTTCCTGTGTAGCCAAAT.......................................................................................................................	22	1	1.00	1	0	1

droVir3

GATAACGATAACGATAACAATAACGATAACTTAAGCGAT-AACGATA-ACGATAAGCGCATCTGGTGACTAGCCGTTCCTGAAGTGTCAAATAGTAGGTACTACTCGTAAGAAAATGTACGTTGATTTTTATTTGGCACATCAGTGACAGCATGTTACGAGTAATTGCACAACAGCCACAGCCGGAGACAGAT-----CCGGAGACAGATG	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells	SRR2096013 Ovary_Strain_9_oxidized	SRR2096014 Ovary_Strain_160_oxidized	SRR2096026 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096038 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096050 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096055 Ovary_Min_43	SRR2096056 Ovary_Min_46	SRR2096057 Ovary_Min_50	SRR2096058 Ovary_Min_98	SRR2096059 Ovary_Min_164	SRR2096060 Ovary_Min_193	SRR2096061 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096072 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096079 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096080 embryo_0-2h from 15to16 day old nondysgenic mothers	SRR2096081 embryo_0-2h from 15to16 day old nondysgenic mothers
......................................................................AGCCGTTCCTGAAGTGTCAAAT.......................................................................................................................	22	1	23787.00	23787	22	0	20	0	6	1638	22	177	7	778	0	0	0	0	5	0	1	1	2	0	2734	3	1	4	3	3	3	5	4767	3774	1469	5010	2	1480	2	0	1	2	12	1445	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	375	0	1	3	0	2	2	1	2	1	1	0	0	0	0	0	0	0
................................................................................................................................TTATTTGGCACATCAGTGACAG.............................................................	22	1	9527.00	9527	5	0	26	1	0	73	1	6	0	4	0	0	0	0	2	0	0	0	6	0	134	2	0	3	2	3	2	2	2635	2096	911	3145	0	149	0	1	1	0	0	291	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	5	0	0	0	7	4	3	2	0	2	0	0	0	0	0
....................................................................................................................................TTGGCACATCAGTGACAGCAT..........................................................	21	1	9320.00	9320	0	0	15	1	4	435	4	21	0	43	0	0	0	0	0	1	0	0	1	0	746	4	1	6	2	2	0	1	2320	1515	780	2267	0	432	1	0	0	0	1	699	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0
......................................................................AGCCGTTCCTGAAGTGTCAA.........................................................................................................................	20	1	8282.00	8282	5	0	8	0	3	688	11	69	0	230	0	0	0	0	0	0	0	0	1	0	1122	3	1	2	1	0	1	3	1278	1403	559	1526	0	685	0	1	0	0	4	573	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	102	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0
......................................................................AGCCGTTCCTGAAGTGTCAAA........................................................................................................................	21	1	6981.00	6981	19	0	6	0	3	655	8	154	5	479	0	0	0	0	0	0	0	1	1	0	744	2	0	7	0	0	1	2	1126	1028	401	1213	0	493	0	0	0	0	3	476	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	149	0	0	1	0	0	0	0	3	0	0	0	0	0	0	0	0	0
....................................................................................................................................TTGGCACATCAGTGACAGCATG.........................................................	22	1	6401.00	6401	4	0	10	0	0	136	4	16	0	29	0	0	0	0	0	0	0	0	1	0	374	1	1	1	4	0	0	5	1875	1054	506	1927	0	178	2	0	0	0	1	259	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	1	1	3	2	0	0	0	0	0	0	0
....................................................................................................................................TTGGCACATCAGTGACAGCA...........................................................	20	1	5694.00	5694	0	0	27	0	0	127	1	33	0	35	0	0	0	0	1	0	0	0	0	0	214	2	0	1	0	0	0	0	1373	1299	585	1596	0	183	1	0	0	0	1	214	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................TATTTGGCACATCAGTGACAG.............................................................	21	1	5203.00	5203	7	1	14	0	0	47	0	3	1	9	0	0	0	0	0	0	0	0	2	0	134	1	0	2	0	1	3	2	1354	1147	528	1585	0	117	0	1	0	1	0	232	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	1	0	1	1	0	2	0	1	0	1	1	0	0	0	0	0
.................................................................................................................................TATTTGGCACATCAGTGACAGC............................................................	22	1	4796.00	4796	0	0	15	1	0	26	0	10	0	13	0	0	0	0	3	0	0	0	0	0	135	0	0	0	0	0	0	0	1464	943	416	1557	0	64	0	2	0	0	0	130	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	1	0	1	1	1	1	0	0	0	0	0	0	2	1	0	0
................................................................................................................................TTATTTGGCACATCAGTGACAGC............................................................	23	1	3770.00	3770	3	0	3	1	1	16	0	6	0	4	0	0	0	0	1	0	0	0	0	0	106	4	0	0	0	0	0	0	1335	661	324	1157	1	46	0	0	0	0	0	89	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	7	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0
.........................................................................CGTTCCTGAAGTGTCAAATAGTC...................................................................................................................	23	1	2864.00	2864	2	0	2	0	0	131	0	0	1	113	0	0	0	0	0	0	0	0	1	0	340	0	0	1	1	0	0	1	562	471	160	572	0	221	0	0	0	0	1	214	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	69	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................TTATTTGGCACATCAGTGACA..............................................................	21	1	2351.00	2351	1	0	14	0	1	30	0	6	0	7	0	0	0	0	1	0	0	0	1	1	55	1	0	0	0	1	2	1	670	528	219	616	1	46	0	0	0	0	0	141	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................AGCCGTTCCTGAAGTGTCA..........................................................................................................................	19	1	1480.00	1480	0	0	6	0	0	129	2	40	1	65	0	0	0	0	0	0	0	0	0	0	147	0	0	2	0	0	1	0	209	258	86	261	0	152	0	0	0	0	1	94	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	26	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................TTTGGCACATCAGTGACAGCA...........................................................	21	1	992.00	992	0	0	2	0	1	29	0	7	0	5	0	0	0	0	0	0	0	0	0	0	38	3	0	1	1	1	0	0	332	192	130	147	0	41	1	0	0	1	0	59	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................AGCCGTTCCTGAAGTGTCAAATT......................................................................................................................	23	1	771.00	771	0	0	0	0	1	57	0	27	1	62	0	0	0	0	0	0	0	0	0	1	78	0	0	0	0	0	0	0	122	108	57	140	0	54	0	0	0	0	0	46	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................AGCCGTTCCTGAAGTGTCAAATA......................................................................................................................	23	1	703.00	703	0	0	2	0	0	26	0	9	0	19	0	0	0	0	0	0	0	0	0	0	97	0	0	0	0	0	1	2	121	101	55	157	0	52	1	1	0	0	0	40	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	15	0	0	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0
.........................................................................CGTTCCTGAAGTGTCAAATAGT....................................................................................................................	22	1	691.00	691	0	0	4	1	2	24	0	45	1	28	0	0	0	0	0	0	0	0	0	0	39	1	0	0	0	0	0	2	222	132	32	111	0	11	0	0	0	0	0	22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	12	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................AGCCGTTCCTGAAGTGTCAAATC......................................................................................................................	23	1	681.00	681	6	0	2	0	0	61	1	0	0	7	0	0	0	0	0	0	0	0	0	0	86	0	0	0	0	0	0	0	94	103	56	148	0	37	0	0	0	0	0	29	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	51	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................TTTGGCACATCAGTGACAGCAT..........................................................	22	1	678.00	678	0	0	2	0	0	23	1	1	0	5	0	0	0	0	0	0	0	0	0	0	37	0	0	0	0	1	0	2	147	106	37	258	0	20	0	0	0	0	0	37	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................TATTTGGCACATCAGTGACA..............................................................	20	1	661.00	661	0	0	3	0	0	19	0	1	0	3	0	0	0	0	0	0	0	0	0	0	20	0	0	0	0	0	0	0	146	168	45	161	0	38	0	0	0	0	0	54	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................TTTGGCACATCAGTGACAGCATG.........................................................	23	1	609.00	609	0	0	0	0	0	15	0	0	0	2	0	0	0	0	0	0	0	0	0	0	47	0	0	0	0	1	0	1	149	106	36	190	0	20	0	0	0	0	0	40	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
....................................................................................................................................TTGGCACATCAGTGACAGC............................................................	19	1	594.00	594	0	0	3	0	1	13	0	6	0	4	0	0	0	0	0	0	0	0	0	0	22	1	1	0	0	0	0	0	162	138	49	165	0	14	0	0	0	0	0	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................TTGGCACATCAGTGACAGCATGT........................................................	23	1	520.00	520	0	0	0	0	0	13	1	3	0	3	0	0	0	0	0	0	0	0	0	0	38	0	0	0	0	0	1	0	149	81	20	157	0	18	0	0	0	0	0	35	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................TTGGCACATCAGTGACAGCATC.........................................................	22	1	504.00	504	0	0	1	0	0	37	1	0	0	1	0	0	0	0	0	0	0	0	0	0	75	0	0	0	0	0	0	1	56	46	43	107	0	52	0	0	0	0	0	82	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................CGTTCCTGAAGTGTCAAATAG.....................................................................................................................	21	1	479.00	479	1	0	1	0	0	33	0	9	0	22	0	0	0	0	0	0	0	0	0	0	42	0	0	0	0	1	0	0	107	97	21	84	0	23	0	0	0	0	0	28	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................TATTTGGCACATCAGTGACAGCT...........................................................	23	1	371.00	371	0	0	0	0	0	12	0	0	0	2	0	0	0	0	0	0	0	0	0	0	25	0	0	0	0	0	0	0	73	62	20	92	0	31	0	0	0	0	0	52	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................CGTTCCTGAAGTGTCAAATAGTCC..................................................................................................................	24	1	336.00	336	1	0	0	0	1	20	0	0	0	12	0	0	0	0	0	0	0	0	0	0	56	0	0	0	0	0	0	1	39	29	21	60	0	39	1	0	0	0	0	44	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................CGTTCCTGAAGTGTCAAATAGTA...................................................................................................................	23	1	330.00	330	1	0	0	0	0	18	0	6	0	11	0	0	0	0	0	0	0	0	0	0	41	0	0	0	0	0	0	0	84	51	13	55	0	21	0	0	0	0	0	22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................TATTTGGCACATCAGTGACAGT............................................................	22	1	304.00	304	0	0	0	0	0	17	0	4	0	4	0	0	0	0	0	0	0	0	0	0	17	0	0	0	0	1	0	0	58	55	19	72	0	22	0	0	0	0	0	34	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................TTATTTGGCACATCAGTGACAGT............................................................	23	1	232.00	232	0	0	0	0	0	11	0	1	0	1	0	0	0	0	0	0	0	0	0	0	25	0	0	0	0	0	0	0	55	30	11	44	0	17	0	0	0	0	0	35	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................CGTTCCTGAAGTGTCAAATAGTCT..................................................................................................................	24	1	191.00	191	0	0	0	0	0	8	0	0	0	20	1	0	0	0	0	0	0	0	0	0	18	0	0	0	0	0	0	0	37	27	19	27	0	15	0	0	0	0	0	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................TTATTTGGCACATCAGTGACAGCT...........................................................	24	1	186.00	186	0	0	0	0	0	6	0	0	0	1	0	0	0	0	0	0	0	0	0	0	13	0	0	0	0	0	0	0	35	25	9	49	0	16	0	0	0	0	0	32	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................TTGGCACATCAGTGACAGCATT.........................................................	22	1	183.00	183	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	62	26	13	60	0	7	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................TATTTGGCACATCAGTGACAGCC...........................................................	23	1	175.00	175	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	57	29	18	57	0	2	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
...................................................................................................................................TTTGGCACATCAGTGACAGC............................................................	20	1	163.00	163	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	1	0	0	0	0	0	0	61	42	16	20	0	3	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................AGCCGTTCCTGAAGTGTCAAATCT.....................................................................................................................	24	1	144.00	144	0	0	0	0	0	13	0	0	0	4	0	0	0	0	0	0	0	0	0	0	29	0	0	0	0	0	0	0	18	21	6	26	0	8	0	0	0	0	0	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................AGCCGTTCCTGAAGTGTC...........................................................................................................................	18	1	129.00	129	0	0	0	0	0	23	0	24	0	32	0	0	0	0	0	0	0	0	0	0	14	0	0	0	0	0	0	0	3	5	3	8	0	9	0	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................TTATTTGGCACATCAGTGAC...............................................................	20	1	125.00	125	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	37	28	11	36	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0
......................................................................AGCCGTTCCTGAAGTGTCAAATCC.....................................................................................................................	24	1	108.00	108	1	0	1	0	1	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	27	0	0	0	0	0	0	0	5	4	15	15	0	15	0	0	0	0	1	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................AGCCGTTCCTGAAGTGTCC..........................................................................................................................	19	1	105.00	105	0	0	0	0	0	12	0	0	0	15	0	0	0	0	0	0	0	0	0	0	15	0	0	0	0	0	0	0	7	6	7	16	0	13	0	0	0	0	0	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................AGCCGTTCCTGAAGTGTCAAAA.......................................................................................................................	22	1	100.00	100	0	0	0	0	1	7	0	3	0	4	0	0	0	0	0	0	0	0	0	0	12	0	0	0	0	0	0	0	16	13	6	23	0	7	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................TATTTGGCACATCAGTGACAGCA...........................................................	23	1	85.00	85	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	37	16	6	22	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................CGTTCCTGAAGTGTCAAATA......................................................................................................................	20	1	75.00	75	0	0	0	0	0	9	0	5	0	7	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	9	9	1	11	0	4	0	0	0	0	0	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................AGCCGTTCCTGAAGTGTCAC.........................................................................................................................	20	1	71.00	71	0	0	0	0	0	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	32	0	0	0	0	0	0	0	0	0	0	0	0	19	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................TTGGCACATCAGTGACAGCATGTC.......................................................	24	1	69.00	69	0	0	0	0	0	3	1	0	0	1	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	12	5	7	16	0	1	0	0	0	0	0	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................TTGGCACATCAGTGACAGCATGTCC......................................................	25	1	67.00	67	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	11	10	12	25	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................AGCCGTTCCTGAAGTGTCAAATTT.....................................................................................................................	24	1	66.00	66	0	0	0	0	0	9	0	0	0	6	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	14	8	3	17	0	5	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................TTTGGCACATCAGTGACAGCATC.........................................................	23	1	65.00	65	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0	0	6	2	4	26	0	5	0	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................AGCCGTTCCTGAAGTGTCAAC........................................................................................................................	21	1	65.00	65	2	0	0	0	0	7	0	1	0	0	0	0	0	0	0	0	0	0	0	0	23	0	0	0	0	0	0	0	3	0	1	5	0	16	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................TTATTTGGCACATCAGTGA................................................................	19	1	64.00	64	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	17	14	4	9	0	5	0	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................TTGGCACATCAGTGACAGCC...........................................................	20	1	48.00	48	0	0	1	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	2	7	1	10	0	7	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................TTTGGCACATCAGTGACAG.............................................................	19	1	48.00	48	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	16	14	4	8	0	2	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................TTTGGCACATCAGTGACAGCATGT........................................................	24	1	47.00	47	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	1	0	0	0	0	7	11	1	22	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................TTATTTGGCACATCAGTGACAGCC...........................................................	24	1	46.00	46	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	18	5	5	13	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................TATTTGGCACATCAGTGACAGTC...........................................................	23	1	44.00	44	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	2	7	4	13	0	4	0	0	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................TTTGGCACATCAGTGACAGCT...........................................................	21	1	43.00	43	0	0	0	0	0	5	0	1	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	12	2	2	11	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................AGCCGTTCCTGAAGTGTCAAATAA.....................................................................................................................	24	1	41.00	41	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	8	6	3	12	0	1	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................TTATTTGGCACATCAGTGACAGCA...........................................................	24	1	39.00	39	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	12	9	2	11	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................CGTTCCTGAAGTGTCAAATAGTCA..................................................................................................................	24	1	39.00	39	0	0	0	0	0	1	0	0	0	6	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	6	8	4	5	0	4	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................TAGCCGTTCCTGAAGTGTCAA.........................................................................................................................	21	1	37.00	37	0	0	0	0	0	6	0	1	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	4	4	3	10	0	4	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................TTGGCACATCAGTGACAGCATGA........................................................	23	1	36.00	36	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	11	5	1	8	0	1	0	0	0	1	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................TTTGGCACATCAGTGACAGCC...........................................................	21	1	35.00	35	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	9	2	4	12	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................CGTTCCTGAAGTGTCAAATAGTT...................................................................................................................	23	1	34.00	34	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	9	10	0	5	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................CGTTCCTGAAGTGTCAAAT.......................................................................................................................	19	1	32.00	32	0	0	0	0	0	2	0	0	1	2	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0	0	4	4	0	6	0	2	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................TTGGCACATCAGTGACAGCATCC........................................................	23	1	32.00	32	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	2	1	4	8	0	6	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................TTATTTGGCACATCAGTGACAGTC...........................................................	24	1	31.00	31	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	6	3	4	8	0	5	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................CGTTCCTGAAGTGTCAAATAGTTC..................................................................................................................	24	1	31.00	31	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	8	3	6	0	3	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................TTGGCACATCAGTGACAGCATGTCCT.....................................................	26	1	28.00	28	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	4	2	3	13	0	1	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................AGCCGTTCCTGAAGTGTCAAT........................................................................................................................	21	1	27.00	27	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0	0	3	4	1	4	0	2	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................TTGGCACATCAGTGACAGCT...........................................................	20	1	26.00	26	0	0	0	0	0	3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	6	4	3	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................ATTTGGCACATCAGTGACAG.............................................................	20	1	24.00	24	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	3	1	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................TATTTGGCACATCAGTGACAGCTC..........................................................	24	1	24.00	24	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	5	3	3	4	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................TTGGCACATCAGTGACAGCATTC........................................................	23	1	22.00	22	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	8	4	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................AGCCGTTCCTGAAGTGTCAAAC.......................................................................................................................	22	1	21.00	21	0	0	0	0	0	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	3	0	1	6	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................TTTATTTGGCACATCAGTGACAG.............................................................	23	1	19.00	19	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	7	3	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................TTATTTGGCACATCAGTGACAGA............................................................	23	1	18.00	18	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	6	2	5	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................TTGGCACATCAGTGACAGCAC..........................................................	21	1	18.00	18	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	2	0	1	2	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................TTGGCACATCAGTGACAG.............................................................	18	1	18.00	18	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	6	2	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................TTGGCACATCAGTGACAGCATGTT.......................................................	24	1	18.00	18	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	9	1	2	3	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................AGCCGTTCCTGAAGTGTCAAATAT.....................................................................................................................	24	1	17.00	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	3	4	5	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................TTGGCACATCAGTGACAGCATGTTC......................................................	25	1	17.00	17	0	0	0	0	0	3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	3	0	4	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................ATTTGGCACATCAGTGACAGC............................................................	21	1	17.00	17	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	4	1	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................AGCCGTTCCTGAAGTGTCAAATTC.....................................................................................................................	24	1	16.00	16	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	1	1	3	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................TTTATTTGGCACATCAGTGACAGC............................................................	24	1	16.00	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	5	1	1	7	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................TTTGGCACATCAGTGACAGCTC..........................................................	22	1	16.00	16	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	4	0	3	1	0	1	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................TTTGGCACATCAGTGACAGCATT.........................................................	23	1	15.00	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	3	2	5	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................TTGGCACATCAGTGACAGT............................................................	19	1	14.00	14	0	0	0	0	0	2	0	2	0	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	2	1	0	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................TTGGCACATCAGTGACAGCATGTCT......................................................	25	1	14.00	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	3	2	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................TATTTGGCACATCAGTGACAGA............................................................	22	1	12.00	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	7	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................TAGCCGTTCCTGAAGTGTCAAA........................................................................................................................	22	1	12.00	12	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	4	2	1	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................TTTGGCACATCAGTGACAGCATGTCC......................................................	26	1	12.00	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	1	5	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................GTTCCTGAAGTGTCAAAT.......................................................................................................................	18	1	12.00	12	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	2	2	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................TATTTGGCACATCAGTGAC...............................................................	19	1	11.00	11	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	1	3	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................TAGCCGTTCCTGAAGTGTCAAAT.......................................................................................................................	23	1	11.00	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	1	5	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................CCGTTCCTGAAGTGTCAAAT.......................................................................................................................	20	1	11.00	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	3	2	1	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................AGCCGTTCCTGAAGTGTCT..........................................................................................................................	19	1	10.00	10	0	0	0	0	0	2	0	1	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................TTTGGCACATCAGTGACAGCAA..........................................................	22	1	10.00	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	2	2	3	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................CGTTCCTGAAGTGTCAAA........................................................................................................................	18	1	10.00	10	0	0	0	0	1	0	0	1	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................TATTTGGCACATCAGTGA................................................................	18	1	10.00	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	3	0	3	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................TTGGCACATCAGTGACAGCATA.........................................................	22	1	10.00	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	4	1	0	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................CCGTTCCTGAAGTGTCAAATA......................................................................................................................	21	1	10.00	10	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................TTATTTGGCACATCAGTGACC..............................................................	21	1	9.00	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................AGCCGTTCCTGAAGTGTCAAG........................................................................................................................	21	1	9.00	9	0	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	2	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................TTATTTGGCACATCAGTGACAGCTC..........................................................	25	1	9.00	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	3	0	0	2	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................TATTTGGCACATCAGTGACAGTT...........................................................	23	1	9.00	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	2	0	1	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................TTTGGCACATCAGTGACAGT............................................................	20	1	9.00	9	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................GCCGTTCCTGAAGTGTCAAAT.......................................................................................................................	21	1	9.00	9	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	3	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................GTTCCTGAAGTGTCAAATAGTC...................................................................................................................	22	1	8.00	8	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................CGTTCCTGAAGTGTCAAATC......................................................................................................................	20	1	8.00	8	0	0	0	0	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	3	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................TTATTTGGCACATCAGTGACAGCAT..........................................................	25	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................TTTGGCACATCAGTGACA..............................................................	18	1	7.00	7	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................AGCCGTTCCTGAAGTGTCAAATCA.....................................................................................................................	24	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	4	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................TTATTTGGCACATCAGTGT................................................................	19	1	7.00	7	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................TATTTGGCACATCAGTGACAGTTC..........................................................	24	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................AGCCGTTCCTGAAGTGTCATC........................................................................................................................	21	1	6.00	6	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................TTTGGCACATCAGTGACAGCATGA........................................................	24	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................TTATTTGGCACATCAGTGACAT.............................................................	22	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	1	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................TTTATTTGGCACATCAGTGACA..............................................................	22	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................AGCCGTTCCTGAAGTGTCCC.........................................................................................................................	20	1	6.00	6	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................AGCCGTTCCTGAAGTGTCAG.........................................................................................................................	20	1	6.00	6	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................TTATTTGGCACATCAGTG.................................................................	18	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................GCACATCAGTGACAGCATG.........................................................	19	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................TTGGCACATCAGTGACAGCAA..........................................................	21	1	5.00	5	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................AGCCGTTCCTGAAGTGTCAATC.......................................................................................................................	22	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................TAGCCGTTCCTGAAGTGTCA..........................................................................................................................	20	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................GGCACATCAGTGACAGCATG.........................................................	20	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................AGCGCATCTGGTGACTAGC..........................................................................................................................................	19	1	5.00	5	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

ATCGATTT------------------------GGGCGGTCATCGATAGACAATGCGCGCATCTGGTGACTAGCTGTTCCTGAAGTGTCAAATAGTGAGTACTACTCGTAAGAAAATGTACGTTGATTTTTATTTGGCACATCAGTGACAGCATGTCACGAGTAATTGCACAACGACC----------------------------------	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
.........................................................................TGTTCCTGAAGTGTCAAATAGTC...................................................................................................................	23	1	202.00	202	5	0	2	3	1	191
.........................................................................TGTTCCTGAAGTGTCAAATAGT....................................................................................................................	22	1	186.00	186	5	1	1	5	0	174
................................................................................................................................TTATTTGGCACATCAGTGACA..............................................................	21	1	123.00	123	26	0	7	6	2	82
.........................................................................TGTTCCTGAAGTGTCAAATAG.....................................................................................................................	21	1	88.00	88	4	0	0	4	1	79
.................................................................................................................................TATTTGGCACATCAGTGACAGC............................................................	22	1	45.00	45	13	1	1	0	7	23
......................................................................AGCTGTTCCTGAAGTGTCAAAT.......................................................................................................................	22	1	37.00	37	0	0	1	1	0	35
......................................................................AGCTGTTCCTGAAGTGTCAAA........................................................................................................................	21	1	31.00	31	2	0	1	0	0	28
.................................................................................................................................TATTTGGCACATCAGTGACAG.............................................................	21	1	29.00	29	20	0	0	2	1	6
................................................................................................................................TTATTTGGCACATCAGTGACAG.............................................................	22	1	27.00	27	19	0	1	1	0	6
.........................................................................TGTTCCTGAAGTGTCAAATAGTCT..................................................................................................................	24	1	27.00	27	0	0	0	0	0	27
................................................................................................................................TTATTTGGCACATCAGTGACAGC............................................................	23	1	26.00	26	5	1	0	0	11	9
.........................................................................TGTTCCTGAAGTGTCAAATAGTG...................................................................................................................	23	1	23.00	23	0	0	0	0	0	23
.................................................................................................................................TATTTGGCACATCAGTGACAGT............................................................	22	1	19.00	19	2	0	1	0	0	16
.........................................................................TGTTCCTGAAGTGTCAAATAGTT...................................................................................................................	23	1	18.00	18	0	0	0	0	0	18
....................................................................................................................................TTGGCACATCAGTGACAGCATG.........................................................	22	1	16.00	16	5	0	0	1	0	10
.................................................................................................................................TATTTGGCACATCAGTGACAGCT...........................................................	23	1	12.00	12	3	0	0	0	1	8
....................................................................................................................................TTGGCACATCAGTGACAGCAT..........................................................	21	1	11.00	11	7	0	0	0	1	3
......................................................................AGCTGTTCCTGAAGTGTCAA.........................................................................................................................	20	1	10.00	10	0	0	0	1	0	9
.................................................................................................................................TATTTGGCACATCAGTGACA..............................................................	20	1	10.00	10	4	0	0	0	0	6
....................................................................................................................................TTGGCACATCAGTGACAGCATGT........................................................	23	1	9.00	9	0	0	0	0	0	9
................................................................................................................................TTATTTGGCACATCAGTGACAGT............................................................	23	1	9.00	9	5	0	0	0	1	3
.........................................................................TGTTCCTGAAGTGTCAAATA......................................................................................................................	20	1	8.00	8	0	0	0	0	0	8
......................................................................AGCTGTTCCTGAAGTGTCAAATT......................................................................................................................	23	1	7.00	7	0	0	0	2	0	5
.........................................................................TGTTCCTGAAGTGTCAAATAGTTC..................................................................................................................	24	1	6.00	6	2	0	0	0	0	4
......................................................................AGCTGTTCCTGAAGTGTCAAATA......................................................................................................................	23	1	5.00	5	1	0	0	0	0	4
................................................................................................................................TTATTTGGCACATCAGTGA................................................................	19	1	5.00	5	0	0	0	1	0	4
...................................................................................................................................TTTGGCACATCAGTGACAGCATG.........................................................	23	1	5.00	5	4	0	0	0	0	1
.........................................................................TGTTCCTGAAGTGTCAAATAGTGA..................................................................................................................	24	1	4.00	4	0	0	0	0	0	4
......................................................................AGCTGTTCCTGAAGTGTCAAATC......................................................................................................................	23	1	4.00	4	0	0	0	0	0	4
....................................................................................................................................TTGGCACATCAGTGACAGCATGA........................................................	23	1	3.00	3	0	0	0	0	0	3
.........................................................................TGTTCCTGAAGTGTCAAATAGTTT..................................................................................................................	24	1	3.00	3	0	0	0	0	0	3
.........................................................................TGTTCCTGAAGTGTCAAATAGTGT..................................................................................................................	24	1	3.00	3	0	0	0	0	0	3
......................................................................AGCTGTTCCTGAAGTGTCA..........................................................................................................................	19	1	3.00	3	0	0	0	1	0	2
.........................................................................TGTTCCTGAAGTGTCAAATAGTCC..................................................................................................................	24	1	3.00	3	1	0	0	0	0	2
......................................................................AGCTGTTCCTGAAGTGTCAAATTT.....................................................................................................................	24	1	2.00	2	1	0	0	0	0	1
..................................................................................................................................ATTTGGCACATCAGTGACA..............................................................	19	1	2.00	2	2	0	0	0	0	0
.......................................................................GCTGTTCCTGAAGTGTCAAATA......................................................................................................................	22	1	2.00	2	0	0	0	0	0	2
..................................................................................................................................ATTTGGCACATCAGTGACAGC............................................................	21	1	2.00	2	0	0	0	0	1	1
................................................................................................................................TTATTTGGCACATCAGTGT................................................................	19	1	2.00	2	0	0	0	0	0	2
.........................................................................TGTTCCTGAAGTGTCAAATAGC....................................................................................................................	22	1	2.00	2	0	0	0	0	0	2
...................................................................................................................................TTTGGCACATCAGTGACAGCATGT........................................................	24	1	2.00	2	0	0	0	0	0	2
................................................................................................................................TTATTTGGCACATCAGTGAC...............................................................	20	1	2.00	2	1	0	0	0	0	1
......................................................................................................................................GGCACATCAGTGACAGCATG.........................................................	20	1	1.00	1	0	0	0	0	0	1
..................................................................................................................................ATTTGGCACATCAGTGACAG.............................................................	20	1	1.00	1	1	0	0	0	0	0
........................................................................CTGTTCCTGAAGTGTCAAATAG.....................................................................................................................	22	1	1.00	1	0	0	0	0	0	1
......................................................................AGCTGTTCCTGAAGTGTCAAC........................................................................................................................	21	1	1.00	1	0	0	0	0	0	1
.........................................................................TGTTCCTGAAGTGTCAAATAGTGC..................................................................................................................	24	1	1.00	1	0	0	0	0	0	1
.........................................................................TGTTCCTGAAGTGTCAAATAGTA...................................................................................................................	23	1	1.00	1	0	0	0	0	0	1
...................................................ATGCGCGCATCTGGTGACTAGC..........................................................................................................................................	22	1	1.00	1	0	0	0	0	0	1
.................................................................................................................................TATTTGGCACATCAGTGACAGCG...........................................................	23	1	1.00	1	0	0	0	1	0	0
................................................................................................................................TTATTTGGCACATCAGTGACAT.............................................................	22	1	1.00	1	1	0	0	0	0	0
................................................................................................................................TTATTTGGCACATCAGTGACT..............................................................	21	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................TTGGCACATCAGTGACAGCATC.........................................................	22	1	1.00	1	0	0	0	0	0	1
...........................................................................TTCCTGAAGTGTCAAATAGTC...................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
....................................................................................................................................TTGGCACATCAGTGACAGC............................................................	19	1	1.00	1	1	0	0	0	0	0
.........................................................................TGTTCCTGAAGTGTCAAATAA.....................................................................................................................	21	1	1.00	1	0	0	0	0	0	1
...................................................................................................................................TTTGGCACATCAGTGACAGCATGTC.......................................................	25	1	1.00	1	0	0	0	0	0	1
..........................................................................GTTCCTGAAGTGTCAAATAG.....................................................................................................................	20	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................TTTGGCACATCAGTGACAGCA...........................................................	21	1	1.00	1	0	0	0	0	1	0
....................................................................................................................................TTGGCACATCAGTGACAGCATGTTC......................................................	25	1	1.00	1	0	0	0	0	0	1
...................................................................ACTAGCTGTTCCTGAAGTGTCA..........................................................................................................................	22	1	1.00	1	0	0	0	0	0	1
.........................................................................TGTTCCTGAAGTGTCAAATAGTCCA.................................................................................................................	25	1	1.00	1	0	0	0	0	0	1
.........................................................................TGTTCCTGAAGTGTCAAATAGTCG..................................................................................................................	24	1	1.00	1	0	0	0	0	0	1
......................................................................AGCTGTTCCTGAAGTGTCAAATCT.....................................................................................................................	24	1	1.00	1	0	0	0	0	0	1
.................................................................................................................................TATTTGGCACATCAGTGA................................................................	18	1	1.00	1	0	0	0	1	0	0
.................................................................................................................................TATTTGGCACATCAGTGAC...............................................................	19	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................TTTATTTGGCACATCAGTGACAGCT...........................................................	25	1	1.00	1	0	0	0	0	0	1
.........................................................................TGTTCCTGAAGTGTCAAATAGTTCT.................................................................................................................	25	1	1.00	1	0	0	0	0	0	1
...................................................................................................................................TTTGGCACATCAGTGACAGCT...........................................................	21	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................TTTGGCACATCAGTGACAGC............................................................	20	1	1.00	1	0	0	0	0	1	0
....................................................................................................................................TTGGCACATCAGTGACAGCATGTTT......................................................	25	1	1.00	1	0	0	0	1	0	0
..........................................................................GTTCCTGAAGTGTCAAATAGT....................................................................................................................	21	1	1.00	1	1	0	0	0	0	0
....................................................TGCGCGCATCTGGTGACTAGC..........................................................................................................................................	21	1	1.00	1	0	0	0	0	0	1
......................................................................AGCTGTTCCTGAAGTGTCAAATAT.....................................................................................................................	24	1	1.00	1	0	0	0	0	0	1
.........................................................................TGTTCCTGAAGTGTCAAATAGA....................................................................................................................	22	1	1.00	1	0	0	0	0	0	1
.........................................................................TGTTCCTGAAGTGTCAAATAGTCTC.................................................................................................................	25	1	1.00	1	0	0	0	0	0	1
................................................................................................................................TTATTTGGCACATCAGTGACAGCT...........................................................	24	1	1.00	1	0	0	0	0	0	1

droAna3

TGCAGACGT-----------------------------------------------CGCGTCCCGTGACGGGCAGTTCCTGAACTGTCAAATAGTGGACGGCAT-------------------AA-ACATATTTGGCACGTCAGTAACAGCCTGTTACAAGTCAGCGCACGACCAGCAC---TA---------------------------	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.................................................................................................................................TATTTGGCACGTCAGTAACAG.............................................................	21	1	27.00	27	2	0	0	1	19	5
.........................................................................AGTTCCTGAACTGTCAAATAGT....................................................................................................................	22	1	27.00	27	2	0	0	4	9	12
...................................................................................................................................TTTGGCACGTCAGTAACAGCCT..........................................................	22	1	21.00	21	7	1	0	4	9	0
...................................................................................................................................TTTGGCACGTCAGTAACAGCC...........................................................	21	1	20.00	20	2	0	0	5	11	2
.................................................................................................................................TATTTGGCACGTCAGTAACA..............................................................	20	1	19.00	19	0	0	0	2	14	3
...................................................................................................................................TTTGGCACGTCAGTAACAGC............................................................	20	1	17.00	17	1	0	0	1	14	1
.................................................................................................................................TATTTGGCACGTCAGTAACAGC............................................................	22	1	16.00	16	1	0	0	2	11	2
...................................................................................................................................TTTGGCACGTCAGTAACAGCCTG.........................................................	23	1	12.00	12	12	0	0	0	0	0
...................................................................................................................................TTTGGCACGTCAGTAACAG.............................................................	19	1	6.00	6	0	0	0	2	4	0
....................................................................................................................................TTGGCACGTCAGTAACAGCCTG.........................................................	22	1	6.00	6	4	0	0	1	1	0
.........................................................................AGTTCCTGAACTGTCAAATAGTGT..................................................................................................................	24	1	4.00	4	1	0	0	0	2	1
...................................................................................................................................TTTGGCACGTCAGTAACAGCCTGT........................................................	24	1	3.00	3	3	0	0	0	0	0
.........................................................................AGTTCCTGAACTGTCAAATAGTG...................................................................................................................	23	1	3.00	3	2	0	0	0	0	1
....................................................................................................................................TTGGCACGTCAGTAACAGCCTGT........................................................	23	1	3.00	3	1	0	0	1	1	0
.........................................................................AGTTCCTGAACTGTCAAATAGTT...................................................................................................................	23	1	2.00	2	2	0	0	0	0	0
...................................................................................................................................TTTGGCACGTCAGTAACAGT............................................................	20	1	2.00	2	0	0	0	0	2	0
.................................................................................................................................TATTTGGCACGTCAGTAACAGT............................................................	22	1	2.00	2	0	0	0	1	1	0
.........................................................................AGTTCCTGAACTGTCAAATAG.....................................................................................................................	21	1	2.00	2	0	0	0	0	1	1
....................................................................................................................................TTGGCACGTCAGTAACAGCCT..........................................................	21	1	2.00	2	2	0	0	0	0	0
.................................................................................................................................TATTTGGCACGTCAGTAACAGCT...........................................................	23	1	2.00	2	0	0	0	0	2	0
.................................................................................................................................TATTTGGCACGTCAGTAAC...............................................................	19	1	1.00	1	0	0	0	0	0	1
.................................................................................................................................TATTTGGCACGTCAGTAACAGTT...........................................................	23	1	1.00	1	0	0	0	0	1	0
...................................................................................................................................TTTGGCACGTCAGTAACAGCA...........................................................	21	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................TATTTGGCACGTCAGTAACAT.............................................................	21	1	1.00	1	0	0	0	0	1	0
......................................................................................................................................GGCACGTCAGTAACAGCCTG.........................................................	20	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................TTTGGCACGTCAGTAACAGCT...........................................................	21	1	1.00	1	0	0	0	1	0	0
.........................................................................AGTTCCTGAACTGTCAAATAGTGG..................................................................................................................	24	1	1.00	1	0	0	0	0	0	1
...................................................................................................................................TTTGGCACGTCAGTAACAGAG...........................................................	21	1	1.00	1	0	0	0	0	1	0
................................................................................................................................ATATTTGGCACGTCAGTAACAG.............................................................	22	1	1.00	1	0	0	0	0	1	0
....................................................................................................................................TTGGCACGTCAGTAACAGCC...........................................................	20	1	1.00	1	1	0	0	0	0	0
...................................................................................................................................TTTGGCACGTCAGTAACAGA............................................................	20	1	1.00	1	0	0	0	0	1	0

droBip1

TGCAAACGT-----------------------------------------------CGCGTCCCGTGACGGGCAGTTCCTGAACTGTCAAATAGTGGACGGCAT-------------------AA-ACATATTTGGCACGTCAGTAACAGCCTGTTACAAGACAGCGCACGAC--------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

dgr_20

scaffold_15081:2041161-2041226 -

candidate-rescued

Canonical miRNA

intergenic

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-34.9	-34.8	-34.8