ID:

dgr_169

 Coordinate:

scaffold_14853:7169867-7170017 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-24.3 -24.2 -24.1

Flybase annnotation

CDS [Dgri\GH24810-cds]; exon [dgri_GLEANR_9436:3]; intron [Dgri\GH24810-in]

Repeatable elements

NameClassFamilyStrand
(CAG)nSimple_repeatSimple_repeat+
mature
star
  1. scaffold_2234:101-119 +
  2. scaffold_8592:3753-3771 +
  3. scaffold_14830:3863397-3863415 -
  4. dgr_169  scaffold_14853:7169885-7169903 +
  5. scaffold_15081:1406884-1406902 +
  6. scaffold_15081:1724579-1724597 +
  7. scaffold_15110:10520725-10520743 +
  8. scaffold_15110:17213166-17213184 +
  9. scaffold_15110:18866750-18866768 +
  10. scaffold_15110:22543156-22543174 -
  11. scaffold_15126:5424651-5424669 -
  12. scaffold_15245:10227723-10227741 +

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------#########-----------------------------------------
GAACAATCTCAGCAAAGATATATTCAATCTTCCAATCGACGCCCCACTTAACAACTACCAACAACAGCAATATCAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGTTGCACAAGGGCAGTAAGTAATCAATACTCAGTGTTGCAATTACATCAAATCACAATATCGTCATGCGATCTGATTTCCTCTGGTTTATTTACAGCTCAGCTAGCACCTATCGTTGCTGTTGTTGACTCAGTTAATCGCTTGCCG
********************************************************************...(((((..(((((.((.((.((....)).)).)).))))).............(((((((((((...))))))..))))).............(((((...)))))))))).......*************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M041
female body
 V109
male body
.......................................................................................................................................................................TCATGCGATCTGATTTCCTCT............................................................... 21 0 1 1.00 1 1 0
......................................................................................................GCAGTTGCACAGGGGAAG................................................................................................................................... 18 2 5 0.20 1 0 1
....................................................................AATATCAGCAGCAGCAGCA.................................................................................................................................................................... 19 0 12 0.08 1 1 0

Anti-sense strand reads

CTTGTTAGAGTCGTTTCTATATAAGTTAGAAGGTTAGCTGCGGGGTGAATTGTTGATGGTTGTTGTCGTTATAGTCGTCGTCGTCGTCGTCGTTGTCGTCGTCGTCAACGTGTTCCCGTCATTCATTAGTTATGAGTCACAACGTTAATGTAGTTTAGTGTTATAGCAGTACGCTAGACTAAAGGAGACCAAATAAATGTCGAGTCGATCGTGGATAGCAACGACAACAACTGAGTCAATTAGCGAACGGC
***************************************************************...(((((..(((((.((.((.((....)).)).)).))))).............(((((((((((...))))))..))))).............(((((...)))))))))).......******************************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droGri2 scaffold_14853:7169817-7170067 + dgr_169 GAACAAT-CT------------------------------------------------------------CAGCAAAGATATATTCAATCTTCCAATC---G--------A----------------CG------CCCCACT------------------------------------------------------------------------------------TAACAACTACCAACAAC------------------------------AGCAATAT------------------CA---------GCAGCAGC---AGCAGCAGCA---ACAGCAGCAGCAGTTGCA--------------------------------CAA----------------------------------------------------------------------------GGGCAG-----------------------------------------------------------------------------------------------------TAAGT-----------------------------------AAT-CAATACTCAGT------------------GTTG---------------CAA---------TTAC----AT------------------------------------------------------------------------CAAATCACAATATCGTCATGCGATC----------------TGATTTCC--TCTGGT-TTA---------------TTTACAGCTCAGCTAGCACC---------------------TAT---C------G-T------------------------------------------------------------------TGC-----TGTTGTTGACTCAGTT-AA-------------T----CGCTTGCCG
droVir3 scaffold_12855:8909707-8909944 + AACA-AC-AG------------------------------------------------------------CAGCAGCA-----------------------------------------AC----------------------------AACT-------------------------------------------------------------------------CAAGCACCAACACCA------ACACCAGCA------A------CA---GCAACAG------------------CA---------GCA---GC---A---GCAG-------------------------------------------------------CA---GCAGCAAC---------------------------------------AGCAACAGCAG-------------------------------------------------CAGCAGCGCCTGCAAT--------------------------------------------------------------A--------------------------------------------------------------------TCAAAAACAA---------CGCCAG------CCGCTGGTCGCC--------AGC------GCCGCCGCCGCCAGCATTCACAATCATCGCT------------------------------------------TGAC-----------------CAATGGCC--TCAGTG-TTGGCGCCGGC-------------------------------------------------GC---C------G-C------------------------------------------------------------------AGCCGCTG-----C---TGCAGCT-GGC-----TATAGGCG----CGGACGTCG
droMoj3 scaffold_6473:15007132-15007370 + GGCA-GA-TAC------AGAA-GTGGCTGCAATGCGAGCCCAATTTGCGCTCGTCGGTGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAACCAGCACCA---GCATCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGC---------------------------ATTTGC------------A---CC----------------AGCAG------------------CAA------CAGCAGCAGCAACAATT----------------------------------------------------------------------------------------------------------GCAGC--------------------------------------------------------AGCAGCATCATCATCAGCAGCAATTG---------CA--------------------------------GCAGCAGCAG---------------CAT---------CTGC----AC-CAG--------CAGCAACA-----------------------------------------------------------------------------------------GCTGCAGC------------------------------------------------------------------------CGC------------------------------------------------------------------------------------------------------C-GCCACCGCCGCAACA-G---TTGGTGCCG
droWil2 scf2_1100000004511:6247287-6247511 + CAACAAC-AT------------------------------------------------------------CAGCAACAG----------------------------------------------------------------------------------------------------TT---------------------------------------------------------------------------------ACAGCAACAGCAGCAACAACAACAA---CAACAGCAGCA---------------AC---AGCAGC----------------------------------------------------------------AGCAACAACAG---------------------------------CAGCAGCAACAA----------------------------------------------------------CAGC-----------------------------------------------AGCTT---------CAACAAGTTCA--------------------------------------------------------GCAGCAGCAG---------------CAA---------TCAC----AACC--------AAC------AGCAGCAACCT-------------------------------------------------CAACA--------TTATC----------------AGAAATTT--TAAGTT-TTGGCGAGGATAGCGCA-GCT------------------------------------------------------GCAA--------AAAGTAT-----------------------------------------------TGC-----CAATATTAAAT---------------------CCCAACTTCAGGCA
dp5 XL_group1e:264565-264784 - GGACAAA-AGC-------------AACCA----------------------AAGCAGCTGCCAATATTGC-----------------------------------------------------------------------------------------------------------AACAACAGCA---------------------------------------------------------ACTTC------------------------AGCAACAACAACAA---CTGCAACTTCAACAACAACAGC------------------A---AC----------------AACAA---------------------------CA---ACAGCAACAA---------------------------------------------CAA----------------------------------------------------------CAGC-----------------------------------------------A---------ACTGCAACTTCAGCA-----------------------------------------------------------ACAACAA---------------CAA---------CAAC----AC-------------------------------------------------------------------------------------CAA-----------------------------------------------------------C--------------------AA-----GCAGCGCCCCGCAA------TGCGAATGT-ACAA--------CCAGAACATCAAC----------------------------AAAACCAACAACTAATGACT----------------------------------TCTA---TTGCGG
droPer2 scaffold_60:66990-67203 + GGACAAA-AGC-------------AACCA----------------------AAGCAGCTGCCAATATTGC-----------------------------------------------------------------------------------------------------------AACAACAGCA---------------------------------------------------------ACTTC------------------------AGCAACAACAACAACAACTGCAACTTCAACAACA---------AC-------------------------------------------------------AGCAA------CAA---------------------------------------------------------CAA----------------------------------------------------------CAGC-----------------------------------------------A---------ACTGCAACTTCAGCA-----------------------------------------------------------ACAACAA---------------CAACAACA-------------A----------------------------------------------------------------------------------CAACACC----------------------------------------------------AA----C--------------------AA-----GCAGCGCCCCGCAA------TGCGAATGT-ACAA--------CCAGAACATCAAC----------------------------AAAACCAACAACTAATGACT----------------------------------TCTA---TTGCGG
droAna3 scaffold_13315:381-631 + CAAAT---AT------------------------------------------------------------TAGTTGAAATATTAAGATTCAAAAG---CTTA--------T----------------AT------TCG------------------ATCGCTTCTAATTTC------------AGCA---------------------------------------------------------AATGCAACAGC------------------AGCAACAAC---------------------------------AAC------------A---AC----------------AGCAG------------------CAG------CAGCAGCAACAAATAATGGCA---------------------------------------CAA----------------------------------------------------------CAGC-----------------------------------------------AACCG---------CAATCTGTTCA-----------------------------------------------------------ACAACAA---------------CA---------------------------------------------------GG----------------TGATCACTCAGCGACAT-------------------------GTGATTAACACTTCCAC---------GGCC--C-----AAGGGCA------------------------------ACAGATCATT------------------------------------------------------CAGAGCCACATGA---TGAACCTGCAGCAGAAGCAGCAG-----------------------------------------------CAAGTGTTG
droBip1 scf7180000396022:4443-4684 - AAACAAC-AA------------------------------------------------------------CAACAACAACAATCGCACAAAA--C---GTTG--------C----------------AATCGAAGCC------AAAGTC--------------------------GCAGCAGCAACA---------------------------------------------------------GTAGC------------------------AACAACAGCAGCAT------------------------------C---AGCAGC---AACAGC-------------------AG------------------CAG------CGGCGGCAG---------------------------------------------------CAGAAG----------CGGTAGCAT------------------CGA---------------CGGC-----------------------------------------------GGC---------AGCAACAACAACA-----------------------------------------------------------ACAACAATAATAACAACAACAATAA---CAGC----------CG-------------------------------------------------------------------------------CAACA----------------------------------------------------------------GCAGCAGCTCGAAAAGCAGC---------------------CGC---C------G-C------------------------------------------------------------------AGCCGTC-----GT---CGCAGCC-GAAGT----------C----CAAGCAACG
droKik1 scf7180000302634:315188-315429 - CAGCAGC-AG------------------------------------------------------------CAGCACA--------------------------------CTATCCACCGGCCGCTGCTGCTGCCGCT------TACTTT--------------------------G----------------------------------------------------------------------CACAGCATCA------ACA---------GCATCAT------------------CA---------GCA---GCATCAGCATC---ATCAGC----------------------------------------------------------------------------------------------------CGCAACATCAG---------------------------------------------------------------------------------------------------------------CCG---------CAGC-------------------------------ACTATTAC-CACAATTCAGTGGCCGTGTTGCATCAAACTCCACCACCA---------CAC----------------------------------------------------------------------------------------------------------------CATT----------------TTACCTCC--------ACAGGCGCCG--GACCC--CCGCCAGCTCT-CTATCAGC---------------------AAC---A------G-C------------------------------------------------------------------AGCCGCCG-----C---CTCAGCT-TAC------------T----CGTTATACG
droFic1 scf7180000453438:41033-41277 - CAGCAAA-CA------------------------------------------------------------CAGCAACGACAAGA-----------------------------------AC----------------------------AATTTCAATC-------------------------GCAGCTAGGACAACTACAAGGACAACAGCAGGATCAGCAGAAAGATGACCAGCAGCAACC------------------A---------CAGCAACA------------------------------------GC-------------------------------------------------------AACAA------ATT-------------------------------------------------------------------------CAAGAGCAGCTGGGAGAACTCCTAAAGCAACAGCAGCAGCAACAGCAGCAAA--------------------------------------------------------------CTCAGCA-----------------------------------------------------------ACGACAA---------------CAA---------CAAT----TG-CAA--------CAGCAACT-----------------------------------------------------------------------------------------GTGGCAAC------------------------------------------------------------------------TACAACC------A-C------------------------------------------------------------------AACAGCAG-----G---ATCAGCA-GA-------------A----AGATGACCA
droEle1 scf7180000491080:1003060-1003288 + TCCCAGC-AA------------------------------------------------------------CAA---------------------------------------TTCACCG----------------CC-------------C-------------------CAGCAGCAACAACAACA---------------------------------------------------------GCCG------------------------CAGCAGCAGCAGCAGCAGCAGCAAGTA------------------------------------C-------------------AG---------CAACAGCAGCAA------CAGCAGCAGCAACAGCGTGCA------------------------------------------------------------------------------------------------------------------------------------------------CTGCAGCAATCTGCCTCGCCGCCGCAGCAGCA-----------------------------------------------------------ACAG------------------C-------------------CG-------------------------------------------------------------------------------CAACAGCAACACGTTGTC---------------------------------TTGCTGCCGCCGACGCA-CTT------------------------------------------------------GCAA--------CCGGCGCACCTCTCTCAGCCACAC-----------------------------TATGTGCC----------------------------------TCAG---CAGCAG
droRho1 scf7180000779270:3390-3651 + GAATAGC-TTCGGGCAGGATGGGCAATTTCACTTTGAGTCGAATCCG---GCAGCTGGTGCCTA----TC-----------------------------------------------------------------------------------------------------------AGCAGCATCA---------------------------------ACTGATTAGCCATTATCAGCAACA------------------ACAGCAACA---GCAACAGCCTC---------------------------A---GC---A---GCAGCA---AC----------------AACAA---------CAAC---ATCATCTTGCCCAACAGCAGCAACAC-----------------------------------------------------------------------------------------------------------A-----TG--------------AGGAGTCACACGCCTCAGAGTCCACATCCTCCGCATCCCTCGCAACTGCAACA-----------------------------------------------------------A---------------------CAG---CAGC----------CG-------------------------------------------------------------------------------CAGCA---A-----------------------------------------------------------C--------------------ACT----TCAGCTCCCCTCA---------------------------------------------------------------------------------------------------------------------------C----CACATGCCC
droBia1 scf7180000301715:147832-148074 - GAACACA-CTC-------------AA--A----------------------GAGCAGC----------------------------------------------------TATCCACCGGC----------------------------AATCC-------------------------CGACAGCAACCTCAACAGCGACAACAGCGA-------------------------------------CA------------------------CAGCAGCAGCA---------------------------------GCAGCA---GCAGCA---A-------------------------------------------------CA---GCAGCAACAG---------------------------------------------CAGTTGCAGCAGCAACCAACGACAGTGAGGAGG-------------------------------------------------------------------------------------------------ATCAGCA--------------------------------------------------------GCAGCAGCAG---------------CAG---------CTAC----AC-TTGGAGGCAGACAGCGAC-----------AAG----------------C------------------------------------------TGCTGAACAGCTCCATTGTTGCAGC------------------------------------------------------------------------GGCCATC------A-C----------------------------------------------------------------------GCTG-----C---AGCAGCA-GA-------------A----CGGCAGCAA
droTak1 scf7180000415809:674110-674353 - GATTAC--AG------------------------------------------------------------T---GGAAATGCGGCCAATAAAATG---CCAAAAATAGACGAAACTCCG------------------------------------------------GCTCAGCAGCCGCAAT---------------------------------------------------------------TACAGCAGCA---ACAA---------CAGCAGCA------------------------------------GC---AACAGC----------------------------AGCAACAACAG---------CAG------CAGCAG------------------------------------------------------CAG----------------------------------------------------------CAACAAACC-----------------------------------CAGAACCAAACTCAATCCCTGCTCAACAAG---------------------------------------------------------------------------------------------------------------------CAACAGC-----------AAA-----------------------------------------------------------TGTTTAATAGTTTCCTGGGTTCCATGGCT--TT------TGGCA-------------------------------------------------------------------------------------------------AGCCGATTGG---AAACATTGC---------------------------------ACCGGACAAG-------------G----CATTTGAGA
droEug1 scf7180000408961:127773-127997 + GAGCAGACAA---------------------------------------------------CGGTTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCAGCAGCAAGTTC------------------AACAGCAGCACCATCAG------AAGCAGCTTCAGCAACA---------GC-------------------------------------------------------AGCAACACCCACA---ACAGCAACAGTTGTCACCCAAGCAGCACCAGCAACAGCAACAACAGCAGCAGCAACAG----------------------------------------------------------CAGC-----------------------------------------------AGC----------------------------------------------ATCATTGTGCTCAACATGG---------------------------------------------------------------------------CGGC-----------TTG----------------C----------------------------------------------------------------------------CGC-ATA---------------TT----------------------------------------------------------------------------CAT------------------------------G-GCGCCCA-ACTGC-----TGCCCG---TGCAGTT-GATCGCC----------------TTGCAG
dm3 chr3L:14018674-14018952 - GCTCAAG-TAA------AATAAA----------------------------GAA-------------------------CATATATTATTTTTTA---CCGGAAATTAATG---------------------------------------------ATTACTTCT--TTTT------------AGCA---------------------------------------------------------AATACAGCAGCA------ACAACAACAACAACAGCAGCA---------------------------------GC---AGCAGC---A---AC----------------AACAA------------------CAG------CAGCAGCAA---------------------------------------------------CAA----------------------------------------------------------CAGCAG--------------------------------------------------------GTCCTGACGCAGCA-----------------------------------------------------------ACAGCCA---------------CAG---------CCTG----GA-CAA--------CAGCAAC-----------AAG----------------TCATCACTCAGCGCCAT-------------------------GTTATAAACACATCCAC---------GGCT--C-----AAGGACA------------------------------ACAAATCATT------------------------------------------------------CAAAGTCATATGTCTTTGGCCTTGC---AGAAGCAGCAG-----------------------------------------------CAATTGTTG
droSim2 2l:12009040-12009305 + CGACAAC-AT------------------------------------------------------------TGTTTGAGACACTCTTGCACAACCAAAT---A--------A----------------AT------TCCAGCCCAATAGCAC----------------------------------------------------------------------------------TGCCAGCAGCA------------------ACGGCAATCGCAGCAATATCTGC---------------------------AGCGGC------------A---AC----------------AGCAG------------------CAA------CAGCAGCAGCAACACCAGGCA------------------------------------------------------------------------------------------------------------------------------------------------CCGCAGCAACCGCAGCAGCTGCAGCTGCAGCA-----------------------------------------------------------GCAGCAG---------------CATCAGCA-------------G----------------------------------------------------------------------------------CACCGTC----------------------------------------------------AACGCA-GCT------------------------------------------------GAATT-CCAGCATTAATTCCAGAACTTCATT----------------------------AG-GCGACCAGGGTGG-----TGCAAT---TGTTGTT-GTTACCC--------------CCGCACCA
droSec2 scaffold_16:543457-543728 + CGACAAC-AT------------------------------------------------------------TGTTTGAGACACTCTTGCACAACCAAAT---A--------A----------------AT------TCCAGCCCAATAGCAC----------------------------------------------------------------------------------TGCCAGCAGCA------------------ACGGCAATCGCAGCAATATCTGC---------------------------AGCGGC------------A---AC----------------AGCAGCAACAGCAG---------CAG------CA---GCAGCAACACCAGGCA------------------------------------------------------------------------------------------------------------------------------------------------CCGCAGCAACCGCAGCAGCTGCAGCTGCAGCA-----------------------------------------------------------GCAGCAG---------------CATCAGCA-------------G----------------------------------------------------------------------------------CACCGTC----------------------------------------------------AACGCA-GCT------------------------------------------------GAATT-CCAGCATTAATTCCAGAACTTCATT----------------------------AG-GCGACCAGGGTGG-----TGCAAT---TGTTGTT-GTTACCC--------------CCGCACCA
droYak3 3L:8416142-8416386 - GGGCAAC-AA------------------------------------------------------------TGCCAGCAACACCA-----------------------------------GC----------------------------AACTCGAATC-------------------------TCAATGTGGCGTG-----------------------------CAACAACAATCTGCTG----C------------------------GCAGCAACAT--G---------------CA---------ACACCAGCAGCA---GCAGCA---ACAGCAGCAACAACTGCT--------------------------------CAA-------------------------------------------------------------------------------------------------------------------------CACACTGAGCAATGGCAACA---------------------ATGTGGCAAGTGGC-ACGCTGCCGCCGCCC---------------ACGCAACTGCT--------------------------------GCAA---------------------CAT---CATCTGCAAC----AT-TT------------------------------------------------------------------------------------------------------------------------------------------GGCGCA-C-GTAAATGTG-AATGCAGC---------------------AGC---G------G-C------------------------------------------------------------------GGTGGTC----------------------------------GCTG---TGGCGG
droEre2 scaffold_4845:9044961-9045196 + AATTTCG-CA--------------------------------------------------------------------ATACGC-----------------------------------G-----------------CAGTT------------------------------------------------------------------------------------CAATTACAACTAGCAGCA------------------GGAGCAGCA---GC---------------------------------------AGC------------A---GC----------------AGCAG------------------CAG------CAGCAGCAGCAACATGCAGCA---------------------------------------TCA----------------------------------------------------------CAGC-----------------------------------------------AACTG---------CAACT--------------------------------------------------------------------------------------------------------------------------------------------AG----------------CTATCATTCTGGGC-ATTTATTTTACAATGCATTGCCGTAATATAAT-----------------TGATATGCTCTAAGTAATTGGCGCTGACCACGCG---------------AGCAACTTTTCATG------------T------T---------GCGA--------TTGGTGCTTC----------------------CC---------------------------------C---TGCTGCA-TG-------------C----TGCATGCTG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droGri2
GAACAAT-CT------------------------------------------------------------CAGCAAAGATATATTCAATCTTCCAATC---G--------A----------------CG------CCCCACT------------------------------------------------------------------------------------TAACAACTACCAACAAC------------------------------AGCAATAT------------------CA---------GCAGCAGC---AGCAGCAGCA---ACAGCAGCAGCAGTTGCA--------------------------------CAA----------------------------------------------------------------------------GGGCAG-----------------------------------------------------------------------------------------------------TAAGT-----------------------------------AAT-CAATACTCAGT------------------GTTG---------------CAA---------TTAC----AT------------------------------------------------------------------------CAAATCACAATATCGTCATGCGATC----------------TGATTTCC--TCTGGT-TTA---------------TTTACAGCTCAGCTAGCACC---------------------TAT---C------G-T------------------------------------------------------------------TGC-----TGTTGTTGACTCAGTT-AA-------------T----CGCTTGCCGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATGCGATC----------------TGATTTCC--TCT.......................................................................................................................................................................................................2111.00110
....................................................................................................................................................................................................................................................................................AATAT------------------CA---------GCAGCAGC---AGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19120.08110
droVir3
AACA-AC-AG------------------------------------------------------------CAGCAGCA-----------------------------------------AC----------------------------AACT-------------------------------------------------------------------------CAAGCACCAACACCA------ACACCAGCA------A------CA---GCAACAG------------------CA---------GCA---GC---A---GCAG-------------------------------------------------------CA---GCAGCAAC---------------------------------------AGCAACAGCAG-------------------------------------------------CAGCAGCGCCTGCAAT--------------------------------------------------------------A--------------------------------------------------------------------TCAAAAACAA---------CGCCAG------CCGCTGGTCGCC--------AGC------GCCGCCGCCGCCAGCATTCACAATCATCGCT------------------------------------------TGAC-----------------CAATGGCC--TCAGTG-TTGGCGCCGGC-------------------------------------------------GC---C------G-C------------------------------------------------------------------AGCCGCTG-----C---TGCAGCT-GGC-----TATAGGCG----CGGACGTCGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........................................................................................................................................................................................................................................................CCAGCA------A------CA---GCAACAG------------------CA---------GCA---.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21180.173001000000000000200000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAG-------------------------------------------------CAGCAGCGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20130.152001000000000000000000000000010000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................CAAC---------------------------------------AGCAACAGCAG-------------------------------------------------CAGCAGCGCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2580.131000000000000000000000000000000000000000000000000000000000000001
.....................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAAC---------------------------------------AGCAACAGCAG-------------------------------------------------CAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.102002000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................G-------------------------------------------------------CA---GCAGCAAC---------------------------------------AGCAACAGCAG-------------------------------------------------C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.102002000000000000000000000000000000000000000000000000000000000000
.ACA-AC-AG------------------------------------------------------------CAGCAGCA-----------------------------------------AC----------------------------AAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.102002000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................GCA---GC---A---GCAG-------------------------------------------------------CA---GCAGCAAC---------------------------------------AGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.102002000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................G-------------------------------------------------------CA---GCAGCAAC---------------------------------------AGCAACAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000000000000000001000000000010000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................CAAC---------------------------------------AGCAACAGCAG-------------------------------------------------CAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000010000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................CAGCA------A------CA---GCAACAG------------------CA---------GCA---GC---A---............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000000000000100000000000000000000000000
............................................................................................................................................................................................................................................................AGCA------A------CA---GCAACAG------------------CA---------GCA---GC---................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................AGCA------A------CA---GCAACAG------------------CA---------GCA---GC---A---GCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................GCA------A------CA---GCAACAG------------------CA---------GCA---GC---A---GCAG-------------------------------------------------------CA---............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................CA---GCAACAG------------------CA---------GCA---GC---A---GCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000010000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GCAAC---------------------------------------AGCAACAGCAG-------------------------------------------------CAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000001000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................CAG-------------------------------------------------------CA---GCAGCAAC---------------------------------------AGCAACAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................................................................................................A---GCAACAG------------------CA---------GCA---GC---A---GCAG-------------------------------------------------------CA---GCAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................AG-------------------------------------------------------CA---GCAGCAAC---------------------------------------AGCAACAGCAG-------------------------------------------------CA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.051000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................GCAG-------------------------------------------------------CA---GCAGCAAC---------------------------------------AGCAACAGCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................GC---A---GCAG-------------------------------------------------------CA---GCAGCAAC---------------------------------------AGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................AGCAAC---------------------------------------AGCAACAGCAG-------------------------------------------------C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051001000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................A---GC---A---GCAG-------------------------------------------------------CA---GCAGCAAC---------------------------------------AGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................AGCA------A------CA---GCAACAG------------------CA---------GCA---.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000010000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................C---A---GCAG-------------------------------------------------------CA---GCAGCAAC---------------------------------------AGCAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................CA---GCAACAG------------------CA---------GCA---GC---A---GC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000001000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................A---GCAGCAAC---------------------------------------AGCAACAGCAG-------------------------------------------------CAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................A---GCAG-------------------------------------------------------CA---GCAGCAAC---------------------------------------AGCAACAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................AGCA------A------CA---GCAACAG------------------CA---------GCA---GC---A---............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000001000000000000000000000000000000000
droMoj3
GGCA-GA-TAC------AGAA-GTGGCTGCAATGCGAGCCCAATTTGCGCTCGTCGGTGGC------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAACCAGCACCA---GCATCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGC---------------------------ATTTGC------------A---CC----------------AGCAG------------------CAA------CAGCAGCAGCAACAATT----------------------------------------------------------------------------------------------------------GCAGC--------------------------------------------------------AGCAGCATCATCATCAGCAGCAATTG---------CA--------------------------------GCAGCAGCAG---------------CAT---------CTGC----AC-CAG--------CAGCAACA-----------------------------------------------------------------------------------------GCTGCAGC------------------------------------------------------------------------CGC------------------------------------------------------------------------------------------------------C-GCCACCGCCGCAACA-G---TTGGTGCCGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..........................................................................................................................................................................................................................................................................................................................TTGC------------A---CC----------------AGCAG------------------CAA------CAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000010
................................................................................................................................................................................................................................................................................................................................................................AGCAG------------------CAA------CAGCAGCAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.306600000
.........................................................................................................................................................................................................................................................................................................................................................................................A------CAGCAGCAGCAACAATT----------------------------------------------------------------------------------------------------------GCAGC--------------------------------------------------------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2350.201000010
...................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAATT----------------------------------------------------------------------------------------------------------GCAGC--------------------------------------------------------AGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................2280.131100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTG---------CA--------------------------------GCAGCAGCAG---------------C..........................................................................................................................................................................................................................................................................................................................................................19200.051100000
................................................................................................................................................................................................................................................................................................................................................................AGCAG------------------CAA------CAGCAGCAGCAACAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051100000
droWil2
CAACAAC-AT------------------------------------------------------------CAGCAACAG----------------------------------------------------------------------------------------------------TT---------------------------------------------------------------------------------ACAGCAACAGCAGCAACAACAACAA---CAACAGCAGCA---------------AC---AGCAGC----------------------------------------------------------------AGCAACAACAG---------------------------------CAGCAGCAACAA----------------------------------------------------------CAGC-----------------------------------------------AGCTT---------CAACAAGTTCA--------------------------------------------------------GCAGCAGCAG---------------CAA---------TCAC----AACC--------AAC------AGCAGCAACCT-------------------------------------------------CAACA--------TTATC----------------AGAAATTT--TAAGTT-TTGGCGAGGATAGCGCA-GCT------------------------------------------------------GCAA--------AAAGTAT-----------------------------------------------TGC-----CAATATTAAAT---------------------CCCAACTTCAGGCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAA----------------------------------------------------------CAGC-----------------------------------------------AGCTT---------CAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................ACAG---------------------------------CAGCAGCAACAA----------------------------------------------------------CAGC-----------------------------------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.15300030
......................................................................................................................................................................................................................................................................................................AGCAGCA---------------AC---AGCAGC----------------------------------------------------------------AGCAACAACAG---------------------------------C.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27100.10101000
.......................................................................................................................................................................................................................................................................................AACAACAA---CAACAGCAGCA---------------AC---AGCAGC----------------------------------------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27100.10101000
............................................................................................................................................................................................................................................................................................................................AC---AGCAGC----------------------------------------------------------------AGCAACAACAG---------------------------------CAGCAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................27190.05100010
.........................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAG---------------------------------CAGCAGCAACAA----------------------------------------------------------CAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
............................................................................................................................................................................................................................................................................................................................AC---AGCAGC----------------------------------------------------------------AGCAACAACAG---------------------------------CAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
............................................................................................................................................................................................................................................................................................................A---------------AC---AGCAGC----------------------------------------------------------------AGCAACAACAG---------------------------------CAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
..............................................................................................................................................................................................................................................................................AGCAGCAACAACAACAA---CAACAGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100010
......................................................................................................................................................................................................................................................................................CAACAACAA---CAACAGCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100010
..........................................................................................................................................................................................................................................................................................................................................................................................................AACAACAG---------------------------------CAGCAGCAACAA----------------------------------------------------------CAGC-----------------------------------------------A....................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
..................................................................................................................................................................................................................................................................................GCAACAACAACAA---CAACAGCAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010
............................................................................................................................................................................................................................................................................................................................AC---AGCAGC----------------------------------------------------------------AGCAACAACAG---------------------------------CA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
..................................................................................................................................................................................................................................................................................................................................GCAGC----------------------------------------------------------------AGCAACAACAG---------------------------------CAGCAGCAAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.05101000
.............................................................................................................................................................................................................................................................................................................................C---AGCAGC----------------------------------------------------------------AGCAACAACAG---------------------------------CAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010
........................................................................................................................................................................................................................................................................................ACAACAA---CAACAGCAGCA---------------AC---................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
.............................................................................................................................................................................................................................................................................................AA---CAACAGCAGCA---------------AC---AGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100001
.................................................................................................................................................................................................................................................................................................................................AGCAGC----------------------------------------------------------------AGCAACAACAG---------------------------------CAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
............................................................................................................................................................................................................................................................................................CAA---CAACAGCAGCA---------------AC---AGCAGC----------------------------------------------------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
............................................................................................................................................................................................................................................................................................................................AC---AGCAGC----------------------------------------------------------------AGCAACAACAG---------------------------------CAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010
..............................................................................................................................................................................................................................................................................................................................................................................................................ACAG---------------------------------CAGCAGCAACAA----------------------------------------------------------CAGC-----------------------------------------------AGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010
dp5
GGACAAA-AGC-------------AACCA----------------------AAGCAGCTGCCAATATTGC-----------------------------------------------------------------------------------------------------------AACAACAGCA---------------------------------------------------------ACTTC------------------------AGCAACAACAACAA---CTGCAACTTCAACAACAACAGC------------------A---AC----------------AACAA---------------------------CA---ACAGCAACAA---------------------------------------------CAA----------------------------------------------------------CAGC-----------------------------------------------A---------ACTGCAACTTCAGCA-----------------------------------------------------------ACAACAA---------------CAA---------CAAC----AC-------------------------------------------------------------------------------------CAA-----------------------------------------------------------C--------------------AA-----GCAGCGCCCCGCAA------TGCGAATGT-ACAA--------CCAGAACATCAAC----------------------------AAAACCAACAACTAATGACT----------------------------------TCTA---TTGCGGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................................CTTC------------------------AGCAACAACAACAA---CTGCAACCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010000000
...........................................................................................................................................................................................................................................................................................................................................................................................................ACAA---------------------------------------------CAA----------------------------------------------------------CAGC-----------------------------------------------A---------ACTGCAACTTCAGCA-----------------------------------------------------------AC...............................................................................................................................................................................................................................................................................................................................................................................2911.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC-----------------------------------------------A---------ACTGCAACTTCAGCA-----------------------------------------------------------AC...............................................................................................................................................................................................................................................................................................................................................................................2211.0010000100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------TGCGAATGT-ACAA--------CCAGA.......................................................................................................2011.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCGAATGT-ACAA--------CCAGAAC.....................................................................................................2011.0010010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................AACAA---------------------------------------------CAA----------------------------------------------------------CAGC-----------------------------------------------A---------ACTGCAACTTCAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
..........C-------------AACCA----------------------AAGCAGCTGCCAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCGCCCCGCAA------TGCGAATGT-ACAA--------C...........................................................................................................2711.0010010000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................AA----------------------------------------------------------CAGC-----------------------------------------------A---------ACTGCAACTTCAGCA-----------------------------------------------------------AC...............................................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
..........................................................................................................................................................................................................................................................................................................TCAACAACAACAGC------------------A---AC----------------AACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.5020200000000
...............................................................................................................................................................................................................................................................................................................AACAACAGC------------------A---AC----------------AACAA---------------------------CA---ACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.3060005001000
..........................................................................................................................................................................................................................................................................................................TCAACAACAACAGC------------------A---AC----------------AAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.2510100000000
...........................................................................................................................................................................................................................................................................................................CAACAACAACAGC------------------A---AC----------------AACAA---------------------------CA---ACAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2940.2510010000000
......................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAA---------------------------------------------CAA----------------------------------------------------------CAGC-----------------------------------------------A---------ACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.2010001000000
................................................................................................................................................................................................................................................................................................................ACAACAGC------------------A---AC----------------AACAA---------------------------CA---AC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.1530300000000
........................................................................................................................................................................................................................................................C------------------------AGCAACAACAACAA---CTGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1980.1310100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-----------------------------------------------------------ACAACAA---------------CAA---------CAAC----AC-------------------------------------------------------------------------------------CAA-----------------------------------------------------------C--------------------A............................................................................................................................................................23150.0710100000000
....................................................................................................................................................................................................................................................................................................................CAGC------------------A---AC----------------AACAA---------------------------CA---ACAGCAACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
............................................................................................................................................................................................................................................................................................................AACAACAACAGC------------------A---AC----------------AACAA---------------------------CA---AC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510100000000
..............................................................................................................................................................................................................................................................................................................CAACAACAGC------------------A---AC----------------AACAA---------------------------CA---ACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510001000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA-----------------------------------------------------------ACAACAA---------------CAA---------CAAC----AC-------------------------------------------------------------------------------------CAA-----------------------------------------------------------..................................................................................................................................................................................21200.0510100000000
......................................................................................................................................................................................................................................................................................................................GC------------------A---AC----------------AACAA---------------------------CA---ACAGCAACAA---------------------------------------------.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
droPer2
GGACAAA-AGC-------------AACCA----------------------AAGCAGCTGCCAATATTGC-----------------------------------------------------------------------------------------------------------AACAACAGCA---------------------------------------------------------ACTTC------------------------AGCAACAACAACAACAACTGCAACTTCAACAACA---------AC-------------------------------------------------------AGCAA------CAA---------------------------------------------------------CAA----------------------------------------------------------CAGC-----------------------------------------------A---------ACTGCAACTTCAGCA-----------------------------------------------------------ACAACAA---------------CAACAACA-------------A----------------------------------------------------------------------------------CAACACC----------------------------------------------------AA----C--------------------AA-----GCAGCGCCCCGCAA------TGCGAATGT-ACAA--------CCAGAACATCAAC----------------------------AAAACCAACAACTAATGACT----------------------------------TCTA---TTGCGGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACC----------------------------------------------------AA----C--------------------AA-----GCAGCGCCCCGCAA------..................................................................................................................................2311.001100000
.......................................................................................................................................................................................................................................................................................AACAACAACAACTGCAACTTCAACAAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACC----------------------------------------------------AA----C--------------------AA-----GCAGCGCCCCGCAC------..................................................................................................................................2311.001100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-----------------------------------------------------------ACAACAA---------------CAACAACA-------------A----------------------------------------------------------------------------------CAACACC----------------------------------------------------AA----C--------------------A............................................................................................................................................................2850.201010000
droAna3
CAAAT---AT------------------------------------------------------------TAGTTGAAATATTAAGATTCAAAAG---CTTA--------T----------------AT------TCG------------------ATCGCTTCTAATTTC------------AGCA---------------------------------------------------------AATGCAACAGC------------------AGCAACAAC---------------------------------AAC------------A---AC----------------AGCAG------------------CAG------CAGCAGCAACAAATAATGGCA---------------------------------------CAA----------------------------------------------------------CAGC-----------------------------------------------AACCG---------CAATCTGTTCA-----------------------------------------------------------ACAACAA---------------CA---------------------------------------------------GG----------------TGATCACTCAGCGACAT-------------------------GTGATTAACACTTCCAC---------GGCC--C-----AAGGGCA------------------------------ACAGATCATT------------------------------------------------------CAGAGCCACATGA---TGAACCTGCAGCAGAAGCAGCAG-----------------------------------------------CAAGTGTTGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AT-------------------------GTGATTAACACTTCCAC---------GG..............................................................................................................................................................................................................2111.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCG---------CAATCTGTTCA-----------------------------------------------------------ACAACA...........................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...................................................................................................................................................................................................................................................................................................................................................................AG------------------CAG------CAGCAGCAACAAATAAT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
.................................................................................................................................................................................................................................................................................AGCAACAAC---------------------------------AAC------------A---AC----------------AGCAG------------------CAG------CAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2740.251010000
..................................................................................................................................................................................................................................................................................................................................................................CAG------------------CAG------CAGCAGCAACAAAT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2050.201000001
..............................................................................................................................................................................................................................................................C------------------AGCAACAAC---------------------------------AAC------------A---AC----------------AGCAG------------------CAG------CAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2760.171100000
..................................................................................................................................................................................................................................................................................GCAACAAC---------------------------------AAC------------A---AC----------------AGCAG------------------CAG------CAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2670.141010000
.............................................................................................................................................................................................................................................................GC------------------AGCAACAAC---------------------------------AAC------------A---AC----------------AG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102000002
.......................................................................................................................................................................................................................................................................................AAC---------------------------------AAC------------A---AC----------------AGCAG------------------CAG------CA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.102020000
...........................................................................................................................................................................................................................................................................................................................AAC------------A---AC----------------AGCAG------------------CAG------CAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102020000
.......................................................................................................................................................................................................................................................................................AAC---------------------------------AAC------------A---AC----------------AGCAG------------------CAG------CAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051010000
.................................................................................................................................................................................................................................................................................AGCAACAAC---------------------------------AAC------------A---AC----------------AGCAG------------------C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000001
............................................................................................................................................................................................................................................................................................................................AC------------A---AC----------------AGCAG------------------CAG------CAGCAGCAACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000001
............................................................................................................................................................................................................................................................................................................................AC------------A---AC----------------AGCAG------------------CAG------CAGCAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051010000
.............................................................................................................................................................................................................................................................................................................................C------------A---AC----------------AGCAG------------------CAG------CAGCAGCAACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
.......................................................................................................................................................................................................................................................................................AAC---------------------------------AAC------------A---AC----------------AGCAG------------------CAG------CAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000001
........................................................................................................................................................................................................................................................................................AC---------------------------------AAC------------A---AC----------------AGCAG------------------CAG------CAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000001
..................................................................................................................................................................................................................................................................................GCAACAAC---------------------------------AAC------------A---AC----------------AGCAG------------------C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051010000
.....................................................................................................................................................................................................................................................................................ACAAC---------------------------------AAC------------A---AC----------------AGCAG------------------CAG------CAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
.....................................................................................................................................................................................................................................................................................ACAAC---------------------------------AAC------------A---AC----------------AGCAG------------------CA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000100
.....................................................................................................................................................................................................................................................................................ACAAC---------------------------------AAC------------A---AC----------------AGCAG------------------CAG------CAGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051000001
..............................................................................................................................................................................................................................................................C------------------AGCAACAAC---------------------------------AAC------------A---AC----------------AGCAG------------------C.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
...................................................................................................................................................................................................................................................................................CAACAAC---------------------------------AAC------------A---AC----------------AGCAG------------------CAG------CA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
......................................................................................................................................................................................................................................................................................CAAC---------------------------------AAC------------A---AC----------------AGCAG------------------CAG------CAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000001
droBip1
AAACAAC-AA------------------------------------------------------------CAACAACAACAATCGCACAAAA--C---GTTG--------C----------------AATCGAAGCC------AAAGTC--------------------------GCAGCAGCAACA---------------------------------------------------------GTAGC------------------------AACAACAGCAGCAT------------------------------C---AGCAGC---AACAGC-------------------AG------------------CAG------CGGCGGCAG---------------------------------------------------CAGAAG----------CGGTAGCAT------------------CGA---------------CGGC-----------------------------------------------GGC---------AGCAACAACAACA-----------------------------------------------------------ACAACAATAATAACAACAACAATAA---CAGC----------CG-------------------------------------------------------------------------------CAACA----------------------------------------------------------------GCAGCAGCTCGAAAAGCAGC---------------------CGC---C------G-C------------------------------------------------------------------AGCCGTC-----GT---CGCAGCC-GAAGT----------C----CAAGCAACGSizeHit CountTotal NormTotal
No Reads
droKik1
CAGCAGC-AG------------------------------------------------------------CAGCACA--------------------------------CTATCCACCGGCCGCTGCTGCTGCCGCT------TACTTT--------------------------G----------------------------------------------------------------------CACAGCATCA------ACA---------GCATCAT------------------CA---------GCA---GCATCAGCATC---ATCAGC----------------------------------------------------------------------------------------------------CGCAACATCAG---------------------------------------------------------------------------------------------------------------CCG---------CAGC-------------------------------ACTATTAC-CACAATTCAGTGGCCGTGTTGCATCAAACTCCACCACCA---------CAC----------------------------------------------------------------------------------------------------------------CATT----------------TTACCTCC--------ACAGGCGCCG--GACCC--CCGCCAGCTCT-CTATCAGC---------------------AAC---A------G-C------------------------------------------------------------------AGCCGCCG-----C---CTCAGCT-TAC------------T----CGTTATACGSizeHit CountTotal NormTotal
No Reads
droFic1
CAGCAAA-CA------------------------------------------------------------CAGCAACGACAAGA-----------------------------------AC----------------------------AATTTCAATC-------------------------GCAGCTAGGACAACTACAAGGACAACAGCAGGATCAGCAGAAAGATGACCAGCAGCAACC------------------A---------CAGCAACA------------------------------------GC-------------------------------------------------------AACAA------ATT-------------------------------------------------------------------------CAAGAGCAGCTGGGAGAACTCCTAAAGCAACAGCAGCAGCAACAGCAGCAAA--------------------------------------------------------------CTCAGCA-----------------------------------------------------------ACGACAA---------------CAA---------CAAT----TG-CAA--------CAGCAACT-----------------------------------------------------------------------------------------GTGGCAAC------------------------------------------------------------------------TACAACC------A-C------------------------------------------------------------------AACAGCAG-----G---ATCAGCA-GA-------------A----AGATGACCASizeHit CountTotal NormTotal
No Reads
droEle1
TCCCAGC-AA------------------------------------------------------------CAA---------------------------------------TTCACCG----------------CC-------------C-------------------CAGCAGCAACAACAACA---------------------------------------------------------GCCG------------------------CAGCAGCAGCAGCAGCAGCAGCAAGTA------------------------------------C-------------------AG---------CAACAGCAGCAA------CAGCAGCAGCAACAGCGTGCA------------------------------------------------------------------------------------------------------------------------------------------------CTGCAGCAATCTGCCTCGCCGCCGCAGCAGCA-----------------------------------------------------------ACAG------------------C-------------------CG-------------------------------------------------------------------------------CAACAGCAACACGTTGTC---------------------------------TTGCTGCCGCCGACGCA-CTT------------------------------------------------------GCAA--------CCGGCGCACCTCTCTCAGCCACAC-----------------------------TATGTGCC----------------------------------TCAG---CAGCAGSizeHit CountTotal NormTotal
No Reads
droRho1
GAATAGC-TTCGGGCAGGATGGGCAATTTCACTTTGAGTCGAATCCG---GCAGCTGGTGCCTA----TC-----------------------------------------------------------------------------------------------------------AGCAGCATCA---------------------------------ACTGATTAGCCATTATCAGCAACA------------------ACAGCAACA---GCAACAGCCTC---------------------------A---GC---A---GCAGCA---AC----------------AACAA---------CAAC---ATCATCTTGCCCAACAGCAGCAACAC-----------------------------------------------------------------------------------------------------------A-----TG--------------AGGAGTCACACGCCTCAGAGTCCACATCCTCCGCATCCCTCGCAACTGCAACA-----------------------------------------------------------A---------------------CAG---CAGC----------CG-------------------------------------------------------------------------------CAGCA---A-----------------------------------------------------------C--------------------ACT----TCAGCTCCCCTCA---------------------------------------------------------------------------------------------------------------------------C----CACATGCCCSizeHit CountTotal NormTotal
No Reads
droBia1
GAACACA-CTC-------------AA--A----------------------GAGCAGC----------------------------------------------------TATCCACCGGC----------------------------AATCC-------------------------CGACAGCAACCTCAACAGCGACAACAGCGA-------------------------------------CA------------------------CAGCAGCAGCA---------------------------------GCAGCA---GCAGCA---A-------------------------------------------------CA---GCAGCAACAG---------------------------------------------CAGTTGCAGCAGCAACCAACGACAGTGAGGAGG-------------------------------------------------------------------------------------------------ATCAGCA--------------------------------------------------------GCAGCAGCAG---------------CAG---------CTAC----AC-TTGGAGGCAGACAGCGAC-----------AAG----------------C------------------------------------------TGCTGAACAGCTCCATTGTTGCAGC------------------------------------------------------------------------GGCCATC------A-C----------------------------------------------------------------------GCTG-----C---AGCAGCA-GA-------------A----CGGCAGCAASizeHit CountTotal NormTotal
No Reads
droTak1
GATTAC--AG------------------------------------------------------------T---GGAAATGCGGCCAATAAAATG---CCAAAAATAGACGAAACTCCG------------------------------------------------GCTCAGCAGCCGCAAT---------------------------------------------------------------TACAGCAGCA---ACAA---------CAGCAGCA------------------------------------GC---AACAGC----------------------------AGCAACAACAG---------CAG------CAGCAG------------------------------------------------------CAG----------------------------------------------------------CAACAAACC-----------------------------------CAGAACCAAACTCAATCCCTGCTCAACAAG---------------------------------------------------------------------------------------------------------------------CAACAGC-----------AAA-----------------------------------------------------------TGTTTAATAGTTTCCTGGGTTCCATGGCT--TT------TGGCA-------------------------------------------------------------------------------------------------AGCCGATTGG---AAACATTGC---------------------------------ACCGGACAAG-------------G----CATTTGAGASizeHit CountTotal NormTotal
No Reads
droEug1
GAGCAGACAA---------------------------------------------------CGGTTTAT--------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCAGCAGCAAGTTC------------------AACAGCAGCACCATCAG------AAGCAGCTTCAGCAACA---------GC-------------------------------------------------------AGCAACACCCACA---ACAGCAACAGTTGTCACCCAAGCAGCACCAGCAACAGCAACAACAGCAGCAGCAACAG----------------------------------------------------------CAGC-----------------------------------------------AGC----------------------------------------------ATCATTGTGCTCAACATGG---------------------------------------------------------------------------CGGC-----------TTG----------------C----------------------------------------------------------------------------CGC-ATA---------------TT----------------------------------------------------------------------------CAT------------------------------G-GCGCCCA-ACTGC-----TGCCCG---TGCAGTT-GATCGCC----------------TTGCAGSizeHit CountTotal NormTotal
No Reads
dm3
GCTCAAG-TAA------AATAAA----------------------------GAA-------------------------CATATATTATTTTTTA---CCGGAAATTAATG---------------------------------------------ATTACTTCT--TTTT------------AGCA---------------------------------------------------------AATACAGCAGCA------ACAACAACAACAACAGCAGCA---------------------------------GC---AGCAGC---A---AC----------------AACAA------------------CAG------CAGCAGCAA---------------------------------------------------CAA----------------------------------------------------------CAGCAG--------------------------------------------------------GTCCTGACGCAGCA-----------------------------------------------------------ACAGCCA---------------CAG---------CCTG----GA-CAA--------CAGCAAC-----------AAG----------------TCATCACTCAGCGCCAT-------------------------GTTATAAACACATCCAC---------GGCT--C-----AAGGACA------------------------------ACAAATCATT------------------------------------------------------CAAAGTCATATGTCTTTGGCCTTGC---AGAAGCAGCAG-----------------------------------------------CAATTGTTGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
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OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
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S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
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Male-body		V084
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CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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droSim2
CGACAAC-AT------------------------------------------------------------TGTTTGAGACACTCTTGCACAACCAAAT---A--------A----------------AT------TCCAGCCCAATAGCAC----------------------------------------------------------------------------------TGCCAGCAGCA------------------ACGGCAATCGCAGCAATATCTGC---------------------------AGCGGC------------A---AC----------------AGCAG------------------CAA------CAGCAGCAGCAACACCAGGCA------------------------------------------------------------------------------------------------------------------------------------------------CCGCAGCAACCGCAGCAGCTGCAGCTGCAGCA-----------------------------------------------------------GCAGCAG---------------CATCAGCA-------------G----------------------------------------------------------------------------------CACCGTC----------------------------------------------------AACGCA-GCT------------------------------------------------GAATT-CCAGCATTAATTCCAGAACTTCATT----------------------------AG-GCGACCAGGGTGG-----TGCAAT---TGTTGTT-GTTACCC--------------CCGCACCASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.............................................................................................................................................................................................................................................................................................................................C------------A---AC----------------AGCAG------------------CAA------CAGCAGCAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22203.1563000063000000000000
.................................................................................................................................................................................................................................................................................AGCAATATCTGC---------------------------AGCGGC------------A---AC----------------AGG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
........AT------------------------------------------------------------TGTTTGAGACACTCTTGCACAACC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000000000
..................................................................................................................................................................................................................................................................................GCAATATCTGC---------------------------AGCGGC------------A---AC----------------AGCAG------------------..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100010000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAGGGTGG-----TGCAAT---TGTTGTT-GT...........................2611.00100010000000000000
........................................................................................................................................................................................................................................................................GGCAATCGCAGCAATATCTGC---------------------------AGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCAGGGTGG-----TGCAAT---TGTTGTT-.............................2411.00100010000000000000
.................................................................................................................................................................................................................................................................................................................................................................GCAG------------------CAA------CAGCAGCAGCAACAC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2290.89800008000000000000
droSec2
CGACAAC-AT------------------------------------------------------------TGTTTGAGACACTCTTGCACAACCAAAT---A--------A----------------AT------TCCAGCCCAATAGCAC----------------------------------------------------------------------------------TGCCAGCAGCA------------------ACGGCAATCGCAGCAATATCTGC---------------------------AGCGGC------------A---AC----------------AGCAGCAACAGCAG---------CAG------CA---GCAGCAACACCAGGCA------------------------------------------------------------------------------------------------------------------------------------------------CCGCAGCAACCGCAGCAGCTGCAGCTGCAGCA-----------------------------------------------------------GCAGCAG---------------CATCAGCA-------------G----------------------------------------------------------------------------------CACCGTC----------------------------------------------------AACGCA-GCT------------------------------------------------GAATT-CCAGCATTAATTCCAGAACTTCATT----------------------------AG-GCGACCAGGGTGG-----TGCAAT---TGTTGTT-GTTACCC--------------CCGCACCASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTCATT----------------------------AG-GCGACCAGGGT.....................................................2011.0010010
...................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAG---------CAG------CA---GCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.1020020
.................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAG---------CAG------CA---GCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510010
............................................................................................................................................................................................................................................................................................................................................................................AG---------CAG------CA---GCAGCAACACCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510010
..........................................................................................................................................................................................................................................................................................................................................A---AC----------------AGCAGCAACAGCAG---------CAG------CA---............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCA-----------------------------------------------------------GCAGCAG---------------CATCAGC....................................................................................................................................................................................................................................................................................................................................................19200.0510010
................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAGCAG---------CAG------CA---GCAGCAACA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510010
..........................................................................................................................................................................................................................................................................................................................................A---AC----------------AGCAGCAACAGCAG---------CAG------C................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0511000
droYak3
GGGCAAC-AA------------------------------------------------------------TGCCAGCAACACCA-----------------------------------GC----------------------------AACTCGAATC-------------------------TCAATGTGGCGTG-----------------------------CAACAACAATCTGCTG----C------------------------GCAGCAACAT--G---------------CA---------ACACCAGCAGCA---GCAGCA---ACAGCAGCAACAACTGCT--------------------------------CAA-------------------------------------------------------------------------------------------------------------------------CACACTGAGCAATGGCAACA---------------------ATGTGGCAAGTGGC-ACGCTGCCGCCGCCC---------------ACGCAACTGCT--------------------------------GCAA---------------------CAT---CATCTGCAAC----AT-TT------------------------------------------------------------------------------------------------------------------------------------------GGCGCA-C-GTAAATGTG-AATGCAGC---------------------AGC---G------G-C------------------------------------------------------------------GGTGGTC----------------------------------GCTG---TGGCGGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA---------------------ATGTGGCAAGTGGC-ACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
.........................................................................................................................................................................................................................................AATCTGCTG----C------------------------GCAGCAACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAATGGCAACA---------------------ATGTGGCAAGTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
........................................................................................................................................................................................TCAATGTGGCGTG-----------------------------CAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100000100000
........................................................................................................................................................................................................................................................................................T--G---------------CA---------ACACCAGCAGCA---GCAGCA---ACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2520.50101000000000
...........................................................................................................................................................................................................................................................................................................CA---------ACACCAGCAGCA---GCAGCA---A..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21120.08100001000000
droEre2
AATTTCG-CA--------------------------------------------------------------------ATACGC-----------------------------------G-----------------CAGTT------------------------------------------------------------------------------------CAATTACAACTAGCAGCA------------------GGAGCAGCA---GC---------------------------------------AGC------------A---GC----------------AGCAG------------------CAG------CAGCAGCAGCAACATGCAGCA---------------------------------------TCA----------------------------------------------------------CAGC-----------------------------------------------AACTG---------CAACT--------------------------------------------------------------------------------------------------------------------------------------------AG----------------CTATCATTCTGGGC-ATTTATTTTACAATGCATTGCCGTAATATAAT-----------------TGATATGCTCTAAGTAATTGGCGCTGACCACGCG---------------AGCAACTTTTCATG------------T------T---------GCGA--------TTGGTGCTTC----------------------CC---------------------------------C---TGCTGCA-TG-------------C----TGCATGCTGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................................................................AGCAGCA------------------GGAGCAGCA---GC---------------------------------------AGC------------A---GC----------------.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2490.1110000010
................................................................................................................................................................................................................................................AGCA------------------GGAGCAGCA---GC---------------------------------------AGC------------A---...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000100
...................................................................................................................................................................................................................................................................................C---------------------------------------AGC------------A---GC----------------AGCAG------------------CAG------CAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0511000000

Generated: 05/17/2015 at 10:05 PM