ID:

dgr_166

 Coordinate:

scaffold_14853:6514777-6514923 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-27.3 -26.7 -26.4 -26.4

Flybase annnotation

exon [dgri_GLEANR_8836:3]; CDS [Dgri\GH24182-cds]; CDS [Dgri\GH24182-cds]; exon [dgri_GLEANR_8836:2]; intron [Dgri\GH24182-in]

Repeatable elements

NameClassFamilyStrand
R1_DYaLINER1+
(CTG)nSimple_repeatSimple_repeat+
mature
  1. dgr_166  scaffold_14853:6514784-6514807 -
  2. scaffold_15110:16265265-16265288 +
star
  1. scaffold_14624:1596256-1596276 -
  2. scaffold_14830:944348-944368 -
  3. scaffold_14853:1933934-1933954 -
  4. scaffold_14853:5617697-5617717 -
  5. dgr_166  scaffold_14853:6514861-6514881 -
  6. scaffold_14853:6869951-6869971 -
  7. scaffold_14853:8340021-8340041 -
  8. scaffold_14906:12499621-12499641 -
  9. scaffold_15074:7150456-7150476 -
  10. scaffold_15074:7621649-7621669 -
  11. scaffold_15081:1194063-1194083 -
  12. scaffold_15110:1672390-1672410 -
  13. scaffold_15110:6271701-6271721 -
  14. scaffold_15110:14565413-14565433 -
  15. scaffold_15112:1702724-1702744 -
  16. scaffold_15112:2113444-2113464 -
  17. scaffold_15112:4352866-4352886 -
  18. scaffold_15245:15477684-15477704 -
  19. scaffold_15252:11680303-11680323 -
  20. scaffold_15252:12719280-12719300 -

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AGCCAATTAAGAAGCTAAACGAGGACGAATCCACATCAAACTCAGAAAGTGTTGAGCTTGAGCAGTCAGCGACTGCTCAGCAACAGCTGCAGCAGCAGCAACAACAACAACAGTTGCAGCAGCAGCAGCAGCAACAGCAGCAACAGCTGCAACAGCAACAACTGCAACAGCAGCAACTGCAACAGCAGCAGCAACAGTTGCAACAACAACAGCAGCAGCAACAGCAGCATCCATATCCGGGTGTTGG
********************************************************************************************......................(((.((.((((..((.((....((((.....((((...)))).....))))....)).))..))))....)).)))********************************************************* 		Read size # Mismatch Hit Count Total Norm Total M041
female body
............................................GAAAGTGTTGAGCTTGAGCA....................................................................................................................................................................................... 20 0 1 1.00 1 1
......................................................................................................................................................................ACAGCAGCAACTGCAACAGCAGCA......................................................... 24 0 2 0.50 1 1
..........................................................................................................................................................................................................ACAACAACAGCAGCAGCAACAGCA..................... 24 0 20 0.05 1 1
........................................................................................................................................................................AGCAGCAACTGCAACAGC............................................................. 18 0 20 0.05 1 1
............................................................................................CAGCAGCAACAACAACAACAG...................................................................................................................................... 21 0 20 0.05 1 1

Anti-sense strand reads

TCGGTTAATTCTTCGATTTGCTCCTGCTTAGGTGTAGTTTGAGTCTTTCACAACTCGAACTCGTCAGTCGCTGACGAGTCGTTGTCGACGTCGTCGTCGTTGTTGTTGTTGTCAACGTCGTCGTCGTCGTCGTTGTCGTCGTTGTCGACGTTGTCGTTGTTGACGTTGTCGTCGTTGACGTTGTCGTCGTCGTTGTCAACGTTGTTGTTGTCGTCGTCGTTGTCGTCGTAGGTATAGGCCCACAACC
*********************************************************......................(((.((.((((..((.((....((((.....((((...)))).....))))....)).))..))))....)).)))******************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M041
female body
...............................................................................................................................................................................................................................CTTCTTAGGTATAGGTCCA..... 19 3 20 0.10 2 2

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droGri2 scaffold_14853:6514727-6514973 - dgr_166 AG---------CCAATTAAGAAGCTAAACGAG------GACGA-----------A--------------------------TCCACATCAAACTCAGAAAGT-----------------------------------------------------------GTTGAGCTTGAGCA------GTCAGCGACTG------------------CTCAGC------A---A------------C---------------------AGCTGCA------------------------------------------------------------------------GCAG-CAG------------------CAA-----------------------------------CAACAACAACAGTTGCAGCAGCAGCAGC------AG------------------------------CAACAGCAGCAACAGCTGCAACAGCA--------AC---------------AACTGCAA------------CAGCAGCAACTG------------CAACAGCAG---------CAGCAACAGTTG---CAA------CAACAACAGCAGCAGC------AACAGCA------------G-------CATCCATATCC------GGGTG--TTGG-
droVir3 scaffold_12970:4480370-4480627 - AG---------ATAGTTTTGGCG---T---CAGCCCACAGCCAATATCAACA---GCAACAGCAGC------AAC-----------------------A--------------------------------GCAGCAACATCTGCA---------------------------------ATAGCAGCAACAG--------CTGCAACAGAAGCAAC------A---G------------C---------------------TGCAACAGCAG---------------C---------------AACAGCAGCA---------------------ACA-------GCTCCAAC------------AGC------------TGCAACAGCAGCAA--------------------------------CAGC------------------------------------------------AGCAACAGCT------G-----------C---------------AACAGCAGCAACAGCAGCAACAGCAGCAACAG------------CAGCAACAG---------CTGCAACAGCTG---CAA------CAGCAGCAACAGCAGC------AACAGCT------------G-CAA---CAGCTGC----------------A--AC-
droMoj3 scaffold_6473:11360938-11361190 + AG---------CCAATCAAGAAGCTAAGCGAG------GACGA-----------A--------------------------TCGCCGACAAATCCAACCAGTGCCGCACAGACTCA------GCC--------------------------------------------------------GCCAGCG----CAGCAGG-------AATCGTCAGCGGCGGCAGCAGCAGCTGCAGCAGC---------------------AGCGG-------------------------------------------------------------------------------CAG---------------CA---G---------------CA-----------------------------GCA---------GCAGC------AG----------------------------CT------CACCAGCAACA------G--CAACAGCAGC---------------AACAACAG------------CAGCAGCAGCAG------------CAACAG------------CAGCTTCAACAG---CAG------CAGCAACAGCAGCCGCAACAGCCACAGCC------------A-------CAGCCGTATCC------GGGCG--CCAG-
droWil2 scf2_1100000005648:530-775 - AA---------C------------------------------------AACT---GCAGCAGCAACAACAACAGC------AG-----------CAACA-----------------------------------A------CAACT---GCAGCAGCA---------------------A--------------------------CAATTGCAGC------A---A---------CAACAACAACAGCAGC---------AACAACAA------------CAG---C---------------AGCAGCAACA---------------------ACA-------GCATCAGC------------AAC------------AGCAACAGCAGCAAC--------------------------------GAATG---------------------------------------------CAACAGCAACA------G--CAA------C---------------AGCAGCAA---CAATTG---CAGCAACAACAACAACAGCAACAACAACAACAG---------CAGCAACAACAA---CAG------CAGCAGCAACAACAGC------AACAACA------------A-------CAGCAGC----------------A--GC-
dp5 Unknown_singleton_1849:5219-5453 + AA---------C------------------------------------ATAT---GCAACAGCAACA------TC--------------------T--------------------------GCAGCAGCAACATC---------T---GCAGCAGCA---------------------ACATCTGCAGC--------------------------A---GCAA------------------CAG---CAGCAACAAC---AG------------------AAG------CA---------------GCAG----------------------------------CAA---------------CA---GCAGCAGCAGCAGCAGGTGCAGCAGC--------------------------------AACAT---------------------------------------------CAGCAACAGCA------A-----------C---------------ATC---AGCAGCAACAGCAGCAAAAGCAACATCAGCAGCAACAGCAGCAGCAG---------CAGCAACAACAG---CAA------CAACAGCAACATCAGC------AACAACA------------A-------CAGCTGCA------------------GCC
droPer2 scaffold_2:5826695-5826928 - TG---------CC------------------------------------ACT---GCAAC------------AAATGTGACGTCGA-----------CAAGTGCTGATAAAATGCAAATGCAAATGAAGCAACGCC---------A---GCA--------------------------------------------------------GAAGCAGC------A---G------------C---------------------AGCAACAGCAGCAGAAA---CAG---CAGCA----------------------------------------------------GCAGCAACAGCAG-----------------------------------------------------------------------CAA------CAA------------------------------------CAGCAACAGCAGCAACAGCA--------GC---------------AACAGCAA------------CAGCAGCAACAG------------CAACAGCAG---------CAGCAGCAACAA---CAG------CAACAGCAACAACAGC------AACAGCA------------G-------CAGCAGCAG--CAAGTT-------TTTGC
droAna3 scaffold_12929:312239-312463 + AT---------CCGAACGAGAAGGTGA---C-----------------------------------------------------------GGCTCA--------------------------GATGATCCAACAGC---------A---GCAGCAGAACATCCTGAGGTTG--CAGACAGA---------------------------GGCGCAGC------C---A------------------------------------------------------AGGCAGCAGCAG----------------------------------------------------CAG------------------CAGCAG------------TT--------------------------------GCAGCAGCAACACT------TG------------------------------CAACAGCAACAGATGCA------GCA--------GC---------------AGCAGCAA------------CTGCAGCAACAG------------------------------CAACAGCAACTG---CAACAGCAGCAGCAGCAACTGCAGC------AACAGCA------------A-------CAACCTTCTCC-------CATGCT--GG-
droBip1 scf7180000396543:345552-345800 + GG---------GTGAAGAAGGAACCGAATGCG------GTCCA---------------GAGGCA------TCTAT------C-----------GCC-----------------------------GCATCATCACC---------A---------------------------------------GCAACAGCA-----ACCCCAACAGACCGCAC------A---C------------C---T------GC------AACAGCAACATCA------------------------------------------------------------------GCAGCAG-CAG------------------CAGCAA------------CA--------GC---------------AGCAGCAGCACCACCTGCAGC------AG------------------------------------------CAGCA------G-----------CAGC------------AGCACCAC------------CACCAGCAACAA------------CAACAACAACATCATGCCCAGCAGCAGCAG---CAG------CAACACCACCAGCAGC------AGCAGCA------------G-------CAGCAGCCC--CAGGCC-------CTGG-
droKik1 scf7180000302685:196331-196561 + AT---------C------------------------------------TACA---GCAGCAGCAACA------AC-----------------------A--------------------------------GCATTTACAGCAGCAGCAGCAGCAGCA---------------------TTTACAGCAGC--------------------------A---GCAG------------------CAA---C------------AGCATCTA------------CAG---C---------------AGCAGCAGCA---------------------ACA-------TCACCAGC------------AGC------------AACAACAACAGCATC--------------------------------TACAG---------------------------------------------CAGCAACAGCAGCAGCTGCA--------GC---------------AACATCTA------------CAGCAGCAACAGCAGCAGCATCATCTA---------------CAGCAGCAGCAG---CAT------CTACAGCAACAGCAGC------ATCTACA------------G-------CAGCAGC----------------A--GC-
droFic1 scf7180000453829:588569-588810 + GGTATTTTAAGC------------------------------------ACAA---GCAACAGCAAC------AAC------TG-----------CAACA--------------------------------------------------------------------------------AAATCAGCAACAGCAGCAGG-------CAAATGCAGCA---------G---------------------------------------------------------------CAGCAACAGCAACCGCAGCAGCAATATATTGAGTGCCAACAACAGCAGCAA----CAT---------------CATC--------------------------------------------------------AT---------------------------------------------------CATCAGCAGCA------GCA--------GCAGCAGC---------AACGGCAG------------CAGCAGCAACAG------------AAGCAGCAA---------CAGCAACAGCAACAGCAA---------CAGCAACAGCAGC---AGCAACAGCA---------ACAG-CAA---CAACA------------CTGTGCA--GT-
droEle1 scf7180000491338:871535-871770 + CA---------CCACTTGCGA-----------------------------------------------------------TATCGCCACTGGCTCA--------------------------GGTGCAGCAACAGC---------A---ACAACTG--------------------------------------------------------CAGC------A---A------------C---------------------AGCTACAGCAGCAACAA---TTG---CAGCA----------------------------------------------------GCAACAATTGCAG-----------------------------------------------------------------------CAGCAACAATTG------------------------------------CAGCAGCAACAATTGCAGCA--------GC---------------ATCAGCTA------------CAGCAGCAACAA------------CAGCTTCAA---------CAGCAACAGCTA---CAG------CAACAGCAGCAATTGC------AACAGCAACAACAGCAACAGACAGCTCAATCTGTGCCC------TGGCG--TACG-
droRho1 scf7180000766547:619-837 + AG---------TTAAT----AGGCCAA----------------------------ACTGTGCCAA-A------TT-----------GGCAGGCACA--------------------------GCAGAAGCAACAAC---------A---GCAGCAG--------------------------------------------------------CAAC------A---A------------C---------------------AGCAACAGCAGCAACAACCAAAACAGCAGCAA----------------------------------------------------CAA------------------CAGC-----------------------------------------------------AGCAACAA------CGG------------------------------------CAGCAACAGCAGCAACAACA--------GC---------------AGCAACAA------------CAGCAGCAACAA---CAG------CAGCAGCAA---------CAGCAACAATAC---CAG------CAGCAACACCAACCAA------AACAGCA------------G-------CAACAAC----------------A--GG-
droBia1 scf7180000302428:5893149-5893371 + AG---------A------------------------------------GGCA---ATTGAAGAA-------CAC-------------------GCAGCA--------------------------GCA---GTC------------------------------------------------TCAGCAACAGCA-----GCAAATTCAAATGATTC------A---GCAG---CAACAAC---------------------AG------CA------------------------------------------------------------------GCAGCAG-CAG------------------CAA-----------------------------------CAACAGCAGCAGCAGCAGCAACAACAGC------AG------------------------------------------CAGCA------G-----------CAGCAGCAACAACAGCAGCAACAA------------CAGCAGCAGCAA---CAA------CAGCAGCAG---------CAGCAACAACAG---CTG------CAACAACAACAACAGT------TGCAGCA------------G-------CAGCAACAA--CA----------------
droTak1 scf7180000415287:239480-239704 + AG---------C------------------------------------AATT---TC---------------------------GCCGCTGGCTCA--------------------------GGTGCAACAGCAGC---------A---GCAACAGCA---------------------ATATCAGCAGC-----------------------------------------------------------------------AGTTACAGCAGCAACAA---CTG---CAGCA----------------------------------------------------GCAACAATTGCAA---------C------------AGCAACAGCTACA--GC---------------------------AGCAGCAA------CTG------------------------------------CAGCAGCAACA------A--CTACAGCAGC---------------AACAACTA------------CAGCAGCAACAA------------TTACAGCAG---------CAGCAACTACAG---CAG------CAACAGTTGCAACAGC---AACAACAGCA---------ACAG-CAG---CAACA------------------------
droEug1 scf7180000407160:1291-1522 + AC---------C------------------------------------AAAT---ATTACACCAACAACAACAAT------TG-----------CCAAA-----------------------------------TC---------A---TCATCATCA---------------------TCATCATCACC--------------------------A---TCA---C---------------CAT---CATCACAGTC---AG------------------C------ATCTA---------------CAA---------------------CTCCAACAA----CAA---------------CAACAA------------CAACAACAGCAGC--------------------------------AACAA---------------------------------------------CAACAACAACA------G-----------C---------------AAC---ACCAACAACAGCCGCTACACCAACAACAACAGCAATTGCAACACCAG---------CAGCAACAACAA---CAA------CAACACCACCAACAAC------AACAACA------------C-------TACCAACA---------------------
dm3 chr3R:24151204-24151437 - TG---------CCAGCCAAAACA-------------------------------------ACAA-------CGCACAGAACACC-------------------------------------------------------------------------------------------------GCCAGCAAC----------------AAAAAGACACA---------ACAG---------C---------------------AACAACA---------------------------------ACCCCAACAGGG-----------AGCAACAACAACC-------ACACAGAC------------AAC------------AACAGCAGCAGCA-----------------------------------GCAGCAGCAACCG------------------------------------CAGCAGCAGCAGCAACAGCA--------GC---------------AACCACAT------------CAGCAGCAGCAG------------CAACATCAT---------CCGCAGCAGCAG---TAC------CAGCAGCAACAACTGA------AACCGCA------------A-------CAACAACCA--CTGGTG-------AGTG-
droSim2 x:3498492-3498712 - dsi_16930 GC---------T--GC--------------------------------ACTACGATCCTCACCAGGA------GC-----------------------T--------------------------GCA---GTT---------------------------------------------CGA---GCAGCATCA-----GCCGCACCAGTCGCATC------A---G------------C---------------------AGCATCAGCAGCAGCAA---CAT---CAGCA----------------------------------------------------GCAACAACATCAGCAGCAACA---TCAG------------CA--------------------------GCAGC---------------------AG------------------------------------CAGCTGCAACA------G--CAACATCAGC---------------AAC------------------ATCAGCAGCTG---CAG------CATCAGCAG---------CAGCAACATCAG---CAG------CAACAACATCAGCAGC------AACATCA------------G-------CTGCAAC----------------A--TC-
droSec2 scaffold_3:7186394-7186621 - AG---------C------------------------------------ATCA---ACAAC------------AAG------TG-----------GCCGC-----------------------------------GC---------A---ACA---------------------------------TCAACAGCAGGCTG-------CAGTGGCTGC------T-------------------------------------------------CAC---------CAGCAGCAG----------------------------------------------------CAA------------------CAGCAG------------TT--------------------------GCAGC------AGCAGCAA------CAACTGCTTCAGTTGTCCATCCAACAGGCGGCT------CACCATCATCAGCAGGAGCA--------GC---------------ATCGCCAA------------CAGCAGCAACAG------------CAACACCAG---------CAGCAACAACAG---CAG------CAGCATCACCAGCAGC------AACAGCA------------G-------GGTCATCCA--CAGGC----------CC-
droYak3 3L:8358747-8358963 - AG---------C------------------------------------ACAA---TCTGCAGGC-----------------------------GCAGCA--------------------------------TCAGAGCCACTCGCAGTTGCAGCAACA---------------------CAGTCAGCAGC-----------------AAAGTCAGC------------------------------------------------------------------------AGCAG----------------------------------------------------CAA------------------CAGCAG------------CA--------GCAGCAACAACAGCAACAGCAGCA---------GCAG---------------------------------------CAGCAACAGCAACAGCAGCAGCAGCA--------AC---------------AACAGCAA------------CAGCAGCAACAG------------CAGCAACAG---------CAGCAACAACAA---CAG------CAGCAACAGCAGCAGT------TACAGCT------------G-------CAGCAACA---------------------
droEre2 scaffold_4784:3586523-3586723 + AG---------C------------------------------------AAAA---TCAGAGCCA------------------------CTC--GCA--------------------------GTTGCAGCAACACA---------A---CCA---------------------------------GCAGC-----------------------AGC------A---T------------C---------------------AG------CA------------------------------------------------------------------GCAGCAG-CAG------------------CAG-----------------------------------CATCAACAGCAGCAGCAGCAGCAACAGC------AG------------------------------CAACAGCAGCAACAGCAGCAGCAGCA--------AC---------------AACAGCAA------------CAGCAGCAG---------------CAGCAACAG---------CAGCAGCATCAA---CAG------CAACAGCAGCAACAGC------AACAGCA------------G-------CAGCAGT----------------T--GC-

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droGri2
AG---------CCAATTAAGAAGCTAAACGAG------GACGA-----------A--------------------------TCCACATCAAACTCAGAAAGT-----------------------------------------------------------GTTGAGCTTGAGCA------GTCAGCGACTG------------------CTCAGC------A---A------------C---------------------AGCTGCA------------------------------------------------------------------------GCAG-CAG------------------CAA-----------------------------------CAACAACAACAGTTGCAGCAGCAGCAGC------AG------------------------------CAACAGCAGCAACAGCTGCAACAGCA--------AC---------------AACTGCAA------------CAGCAGCAACTG------------CAACAGCAG---------CAGCAACAGTTG---CAA------CAACAACAGCAGCAGC------AACAGCA------------G-------CATCCATATCC------GGGTG--TTGG-SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................................................................................GAAAGT-----------------------------------------------------------GTTGAGCTTGAGCA------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------CAGCAGCAACTG------------CAACAGCAG---------CA....................................................................................................2420.50110
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------CAACAACAGCAGCAGC------AACAGCA------------.....................................24200.05110
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACTG------------CAACAGC.................................................................................................................18200.05110
.....................................................................................................................................................................................................................................................................................................................................................CAG-CAG------------------CAA-----------------------------------CAACAACAACAG.............................................................................................................................................................................................................................................................................21200.05110
droVir3
AG---------ATAGTTTTGGCG---T---CAGCCCACAGCCAATATCAACA---GCAACAGCAGC------AAC-----------------------A--------------------------------GCAGCAACATCTGCA---------------------------------ATAGCAGCAACAG--------CTGCAACAGAAGCAAC------A---G------------C---------------------TGCAACAGCAG---------------C---------------AACAGCAGCA---------------------ACA-------GCTCCAAC------------AGC------------TGCAACAGCAGCAA--------------------------------CAGC------------------------------------------------AGCAACAGCT------G-----------C---------------AACAGCAGCAACAGCAGCAACAGCAGCAACAG------------CAGCAACAG---------CTGCAACAGCTG---CAA------CAGCAGCAACAGCAGC------AACAGCT------------G-CAA---CAGCTGC----------------A--AC-SizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
........................................................................AAC-----------------------A--------------------------------GCAGCAACATCTGCA---------------------------------ATAGCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................CAACAGAAGCAAC------A---G------------C---------------------TGCAACAGC...............................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000010000000000000000000000000000
................................................................................................................................................................................................................................................................................................................ACAGCAGCA---------------------ACA-------GCTCCAAC------------AGC------------..................................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.............AGTTTTGGCG---T---CAGCCCACA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.........................................CAATATCAACA---GCAACAGCAGC------AAC-----------------------A--------------------------------A.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2730.331000000000000000000000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGC------AACAGCT------------G-CAA---CAGCTG.......................2630.331001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAG------------CAGCAACAG---------CTGCAACAGCTG---.......................................................................................2630.331001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCT------G-----------C---------------AACAGCAGCAACAGC.....................................................................................................................................................2440.251001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................AAC------------AGC------------TGCAACAGCAGCAA--------------------------------CAGC------------------------------------------------................................................................................................................................................................................................................2440.251001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCTG---CAA------CAGCAGCAACAGC.................................................................2440.251001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................AAC------A---G------------C---------------------TGCAACAGCAG---------------C---------------AACAGC........................................................................................................................................................................................................................................................................................................................................................................................2440.251001000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGC------AACAGCT------------G-CAA---CA...........................2550.201001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................AGCAA--------------------------------CAGC------------------------------------------------AGCAACAGCT------G-----------C---------------AACA................................................................................................................................................................2550.201001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAG------------CAGCAACAG---------CTGCAACA..............................................................................................2550.201001000000000000000000000000000000000000000000000000000000000000
.............................................ATCAACA---GCAACAGCAGC------AAC-----------------------...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2190.111000100000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAACAGCAGCAAC...............................................................................................................................................20200.102000000000000000000000000000002000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAA--------------------------------CAGC------------------------------------------------AGCAAC..........................................................................................................................................................................................................20200.102000000000000000000000000000002000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................ACAGCAG---------------C---------------AACAGCAGCA---------------------AC.............................................................................................................................................................................................................................................................................................................................................................20200.102000000000000000000000000000002000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------CAGCAGCAACAGCAGC------AAC.....................................................20200.102000000000000000000000000000002000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAACAGCAGCAACAG------------CAGCAA..................................................................................................................29120.081000000000000000000000000001000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAACAGCAGCAACAGCAGCAA.......................................................................................................................................29120.081000000000000000000000000001000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAG------------CAGCAACA................................................................................................................20200.051000000000000000000000000010000000000000000000000000000000000000
................................................AACA---GCAACAGCAGC------AAC-----------------------A--------------------------------GCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAGCAGCAACA.....................................................................................................................................20200.051000000000000000000000000010000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAACAGCA...........................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................CAGCAGC------AAC-----------------------A--------------------------------GCAGCAACA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000010000000000000000000000000000000000000
droMoj3
AG---------CCAATCAAGAAGCTAAGCGAG------GACGA-----------A--------------------------TCGCCGACAAATCCAACCAGTGCCGCACAGACTCA------GCC--------------------------------------------------------GCCAGCG----CAGCAGG-------AATCGTCAGCGGCGGCAGCAGCAGCTGCAGCAGC---------------------AGCGG-------------------------------------------------------------------------------CAG---------------CA---G---------------CA-----------------------------GCA---------GCAGC------AG----------------------------CT------CACCAGCAACA------G--CAACAGCAGC---------------AACAACAG------------CAGCAGCAGCAG------------CAACAG------------CAGCTTCAACAG---CAG------CAGCAACAGCAGCCGCAACAGCCACAGCC------------A-------CAGCCGTATCC------GGGCG--CCAG-SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................GACTCA------GCC--------------------------------------------------------GCCAGCG----CAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..........................................................................................................................................................................................CG----CAGCAGG-------AATCGTCAGCGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
.................................................................................................CCAGTGCCGCACAGACTCA------GCC--------------------------------------------------------GCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGCAACAGCCACAGCC------------A-------C............................2011.001000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCCGCAACAGCCACAGCC------------A-------C............................2211.001000010
..............ATCAAGAAGCTAAGCGAG------GACG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
..................................................................................................................................................................................................................GTCAGCGGCGGCAGCAGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................1930.331100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAACAG---CAG------CAGCAACAGC....................................................................2150.201100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCCACAGCC------------A-------CAGC.........................19200.153200010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA------G--CAACAGCAGC---------------AACAACAG------------C...............................................................................................................................................25200.153200001
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------G--CAACAGCAGC---------------AACAACAG------------CAGC............................................................................................................................................24200.102100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------AACAACAG------------CAGCAGCAGCAG------------C.......................................................................................................................22200.102200000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC---------------AACAACAG------------CAGCAGCAGCAG------------CA......................................................................................................................27200.051000010
...............................................................................................................................................................................................................................................C---------------------AGCGG-------------------------------------------------------------------------------CAG---------------CA---G---------------CA-----------------------------GCA---------GCA...............................................................................................................................................................................................................................................................20200.051100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---------------AACAACAG------------CAGCAGCAGCAG------------CAACA...................................................................................................................27200.051100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA------G--CAACAGCAGC---------------AACA................................................................................................................................................................20200.051000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAG------------CAGCAGCAGCAG------------CAACAG------------C.....................................................................................................26200.051010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGC---------------AACAACAG------------CAGCA...........................................................................................................................................22200.051000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAGCAACA------G--CAACAGC......................................................................................................................................................................................19200.051100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACA------G--CAACAGCAGC---------------A...................................................................................................................................................................19200.051100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAG---CAG------CAGCAACAGCA...................................................................18200.051000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACA------G--CAACAGCAGC---------------AACAAC..............................................................................................................................................................20200.051010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---------------AACAACAG------------CAGCAGCAGCAG------------CA......................................................................................................................24200.051100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGC---------------AACAACAG------------CAGCAGCAGCA.....................................................................................................................................23200.051100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---CAG------CAGCAACAGCAGCCGC..............................................................21200.051100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---------------AACAACAG------------CAGCAGCAGCAG------------CAACA...................................................................................................................28200.051100000
..............................................................................................................................................................................................................................AGCAGCAGCTGCAGCAGC---------------------AG......................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCCACAGCC------------A-------CAGC.........................20200.051100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---------------AACAACAG------------CAGCAGCA........................................................................................................................................18200.051000010
............................................................................................................................................................................................................................................CAGC---------------------AGCGG-------------------------------------------------------------------------------CAG---------------CA---G---------------CA-----------------------------GC............................................................................................................................................................................................................................................................................19200.051000010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGC---------------AACAACAG------------CAGCAGC.........................................................................................................................................22200.051000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAG---CAG------CAGCAACAGCAG..................................................................21200.051100000
droWil2
AA---------C------------------------------------AACT---GCAGCAGCAACAACAACAGC------AG-----------CAACA-----------------------------------A------CAACT---GCAGCAGCA---------------------A--------------------------CAATTGCAGC------A---A---------CAACAACAACAGCAGC---------AACAACAA------------CAG---C---------------AGCAGCAACA---------------------ACA-------GCATCAGC------------AAC------------AGCAACAGCAGCAAC--------------------------------GAATG---------------------------------------------CAACAGCAACA------G--CAA------C---------------AGCAGCAA---CAATTG---CAGCAACAACAACAACAGCAACAACAACAACAG---------CAGCAACAACAA---CAG------CAGCAGCAACAACAGC------AACAACA------------A-------CAGCAGC----------------A--GC-SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................................................................................AATTGCAGC------A---A---------CAACAACAACAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................24100.20202000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTG---CAGCAACAACAACAACAGC.............................................................................................................................24100.20202000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG---CAGCAACAACAACAACAGCAACAACA......................................................................................................................2860.17101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------AACAACA------------A-------CAGCAGC----------------A--GC-20200.15300030
.......................................................................................................................................................................................................................................................GCAGC---------AACAACAA------------CAG---C---------------A.............................................................................................................................................................................................................................................................................................................................................................................................18200.15300030
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACA------G--CAA------C---------------AGCAGCAA---CA.......................................................................................................................................................19200.15300030
......................................................................................................................................................................................................................................................................................................................................................................................................CAAC--------------------------------GAATG---------------------------------------------CAACAGCAACA------G--CAA------C---------------....................................................................................................................................................................2580.13101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG---CAGCAACAACAACAACAGCAACA.........................................................................................................................2580.13101000
...........................................................................................................................................................................................................................................................................................................................................................TCAGC------------AAC------------AGCAACAGCAGCAAC--------------------------------GAA................................................................................................................................................................................................................................................................2690.11100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTG---CAGCAACAACAACAACAG..............................................................................................................................23100.10101000
.........................................................................................................................................................................................................................................................................ACAA------------CAG---C---------------AGCAGCAACA---------------------AC.............................................................................................................................................................................................................................................................................................................................................................20200.10200002
.................................................................................................CA-----------------------------------A------CAACT---GCAGCAGCA---------------------A--------------------------CAATTGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10202000
.............................................................................................................................................................A---------------------A--------------------------CAATTGCAGC------A---A---------CAACAACAACAGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................27100.10101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---CAATTG---CAGCAACAACAACAACAGC.............................................................................................................................27100.10101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAA---CAG------CAGCAGCAACAAC.................................................................20200.10200002
.............................................................GCAACAACAACAGC------AG-----------CAACA-----------------------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.10200020
...............................................................................................................................................................................................................AATTGCAGC------A---A---------CAACAACAACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................23100.10101000
.............................................................................................................................................................................................................................................................................................................................................................AGC------------AAC------------AGCAACAGCAGCAAC--------------------------------G..................................................................................................................................................................................................................................................................22110.09100010
....................................................................................................................................................................................................................................................................................................................CAACA---------------------ACA-------GCATCAGC------------AAC------------AGCAACAG..........................................................................................................................................................................................................................................................................................................27120.08101000
.......................................................................................................................................................................................................................................................................................................................CA---------------------ACA-------GCATCAGC------------AAC------------AGCAACAGCAG.......................................................................................................................................................................................................................................................................................................27120.08100010
..........................................................................................................................................................................................................................................................................CAA------------CAG---C---------------AGCAGCAACA---------------------ACA-------GCATCAG..............................................................................................................................................................................................................................................................................................................................................27120.08100010
...............................................................................................................................................................................................................AATTGCAGC------A---A---------CAACAACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................19130.08100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTG---CAGCAACAACAACA..................................................................................................................................19130.08100010
....................................................................................................................................................................................................................................................................................................................CAACA---------------------ACA-------GCATCAGC------------AAC------------AGC...............................................................................................................................................................................................................................................................................................................22140.07100010
...................................................T---GCAGCAGCAACAACAACAGC------AG-----------CAACA-----------------------------------.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28140.07100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---CAG------CAGCAGCAACAACAGC------AACAA...................................................25150.07100010
AA---------C------------------------------------AACT---GCAGCAGCAACAACAACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25150.07101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACA------G--CAA------C---------------AGCAGCAA---CAATT....................................................................................................................................................25160.06100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................TG---------------------------------------------CAACAGCAACA------G--CAA------C---------------AGCAGC..............................................................................................................................................................24170.06101000
................................................................................................................................................................................................................................................................................................................................................A-------GCATCAGC------------AAC------------AGCAACAGCAG.......................................................................................................................................................................................................................................................................................................23170.06101000
.......................................................................................................................................................................................................................................................................................................................CA---------------------ACA-------GCATCAGC------------AAC------------AGC...............................................................................................................................................................................................................................................................................................................19170.06100010
..........................................................................................................................................................................................................................................................................................................................................................ATCAGC------------AAC------------AGCAACAGCAGCAAC--------------------------------...................................................................................................................................................................................................................................................................24190.05101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAACAGC------AACAACA------------A-------CAGCA........................26190.05100010
...............................................................................................AACA-----------------------------------A------CAACT---GCAGCAGCA---------------------A--------------------------C..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
..................................................................................................A-----------------------------------A------CAACT---GCAGCAGCA---------------------A--------------------------CAATTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGC------AACAACA------------A-------CAGCAGC----------------A--...25200.05100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACA------G--CAA------C---------------AGCAG...............................................................................................................................................................21200.05101000
...........................................................................................................................................................................................................................................................C---------AACAACAA------------CAG---C---------------AGCAGC........................................................................................................................................................................................................................................................................................................................................................................................19200.05101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---CAATTG---CAGCAACAACAACAG.................................................................................................................................23200.05101000
........................................................................................................................................................................................................................................................................AACAA------------CAG---C---------------AGCAGCAACA---------------------A..............................................................................................................................................................................................................................................................................................................................................................20200.05100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---CAG------CAGCAGCAACAACAGC------AACA....................................................25200.05100100
.................................................................................................CA-----------------------------------A------CAACT---GCAGCAGCA---------------------A--------------------------CAATTGCAGC------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.05101000
....................................................................................................................................................................................................................................................ACAGCAGC---------AACAACAA------------CAG---C---------------A.............................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA---CAG------CAGCAGCAACAA..................................................................20200.05100010
.............................................................................................................................................................................................................................................................................................................................................................AGC------------AAC------------AGCAACAGCAGCA.....................................................................................................................................................................................................................................................................................................19200.05101000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAG---------CAGCAACAACAA---CA.....................................................................................21200.05100010
.............................................................................................................................................................A---------------------A--------------------------CAATTGCAGC------A---A---------CAACAACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------G--CAA------C---------------AGCAGCAA---CAATTG---................................................................................................................................................20200.05101000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAGCAACAACAACA...................................................................................................................22200.05100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAACAG---------CAGCAA................................................................................................19200.05100010
...............................................................AACAACAACAGC------AG-----------CAACA-----------------------------------A------C...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAGC------AACAACA------------A-------CAGCAGC----------------A--...26200.05100010
..................................................................................................A-----------------------------------A------CAACT---GCAGCAGCA---------------------A--------------------------CAATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAA---CAG------CAGCAGC.......................................................................19200.05101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAA---CAG------CAGCAGCAACAACA................................................................23200.05100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACA------G--CAA------C---------------AGCAGC..............................................................................................................................................................21200.05100001
dp5
AA---------C------------------------------------ATAT---GCAACAGCAACA------TC--------------------T--------------------------GCAGCAGCAACATC---------T---GCAGCAGCA---------------------ACATCTGCAGC--------------------------A---GCAA------------------CAG---CAGCAACAAC---AG------------------AAG------CA---------------GCAG----------------------------------CAA---------------CA---GCAGCAGCAGCAGCAGGTGCAGCAGC--------------------------------AACAT---------------------------------------------CAGCAACAGCA------A-----------C---------------ATC---AGCAGCAACAGCAGCAAAAGCAACATCAGCAGCAACAGCAGCAGCAG---------CAGCAACAACAG---CAA------CAACAGCAACATCAGC------AACAACA------------A-------CAGCTGCA------------------GCCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAGCAGCAG---------C.....................................................................................................20200.501001000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACATCAGC------AACAACA------------A-------CAGC.........................2130.3310100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAGC------AACAACA------------A-------CAGC.........................1960.1710010000000
...........................................................................................................................................................................................................................................................CAACAAC---AG------------------AAG------CA---------------GCAG----------------------------------C...................................................................................................................................................................................................................................................................................................................................................1970.1410010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAG---------CAGCAACAACAG---CA.....................................................................................22200.1020200000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAG---------CAGCAACAACAG---CA.....................................................................................21200.1020100100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATCAGCAGCAACAGCAGC....................................................................................................................22110.0910010000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------A-----------C---------------ATC---AGCAGCAACAGCAGC...............................................................................................................................................22110.0910010000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAGCAACAGCAGCAGCAG---------C.....................................................................................................24140.0710000100000
...................................................................................................................................................................................................................................................................................................................GCAG----------------------------------CAA---------------CA---GCAGCAGCAGCAGCAGG............................................................................................................................................................................................................................................................................................................26140.0710100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAGCAGCAGCAG---------CA....................................................................................................23200.0510001000000
..........................................................................................................................................................................................................................................................................................................................................................AA---------------CA---GCAGCAGCAGCAGCA..............................................................................................................................................................................................................................................................................................................19200.0510000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACAGCAGCAGCAG---------CAG...................................................................................................23200.0510100000000
.........................................................................................................................................................................................GCAGC--------------------------A---GCAA------------------CAG---CAGCAAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510001000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAGCAG---------CAG...................................................................................................20200.0510100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G---------CAGCAACAACAG---CAA------CAACAG........................................................................22200.0510100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCAGCAGCAACAGCAGC....................................................................................................................19200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAGCAGCAGCA................................................................................................................20200.0510000100000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAG---------CAGCAACAACA...........................................................................................22200.0510000100000
...........................................................................................................................................................................................AGC--------------------------A---GCAA------------------CAG---CAGCAACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................19200.0510100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAG---CAA------CAACAGCAAC....................................................................23200.0510100000000
...................................................................................................................................................................................................................................................................................................................GCAG----------------------------------CAA---------------CA---GCAGCAGCAGCA.................................................................................................................................................................................................................................................................................................................21200.0510000100000
.................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAGGTG..........................................................................................................................................................................................................................................................................................................18200.0510100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAG---------CAGCAACA..............................................................................................20200.0510000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAG---------CAGCAACAACAG---CAA------..............................................................................23200.0510000100000
...........................................................................................................................................................................................................................................................................................G------CA---------------GCAG----------------------------------CAA---------------CA---GCAGCAGCA....................................................................................................................................................................................................................................................................................................................21200.0510000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------ATC---AGCAGCAACAGCAGC...............................................................................................................................................19200.0510100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAG---------CAGCAACA..............................................................................................19200.0510000010000
....................................................................................................................................................................................................................................................................................................................CAG----------------------------------CAA---------------CA---GCAGCAGCAG...................................................................................................................................................................................................................................................................................................................18200.0510100000000
droPer2
TG---------CC------------------------------------ACT---GCAAC------------AAATGTGACGTCGA-----------CAAGTGCTGATAAAATGCAAATGCAAATGAAGCAACGCC---------A---GCA--------------------------------------------------------GAAGCAGC------A---G------------C---------------------AGCAACAGCAGCAGAAA---CAG---CAGCA----------------------------------------------------GCAGCAACAGCAG-----------------------------------------------------------------------CAA------CAA------------------------------------CAGCAACAGCAGCAACAGCA--------GC---------------AACAGCAA------------CAGCAGCAACAG------------CAACAGCAG---------CAGCAGCAACAA---CAG------CAACAGCAACAACAGC------AACAGCA------------G-------CAGCAGCAG--CAAGTT-------TTTGCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGC------AACAGCA------------G-------CAGCAGCA.....................25150.071001000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGC------AACAGCA------------G-------CAGCAGCA.....................24190.051010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGC------AACAGCA------------G-------CAGCAG.......................21200.051001000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGC------AACAGCA------------G-------CAGC.........................21200.051001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------CAACAGCAG---------CAGCAGCAACA...........................................................................................21200.051001000
droAna3
AT---------CCGAACGAGAAGGTGA---C-----------------------------------------------------------GGCTCA--------------------------GATGATCCAACAGC---------A---GCAGCAGAACATCCTGAGGTTG--CAGACAGA---------------------------GGCGCAGC------C---A------------------------------------------------------AGGCAGCAGCAG----------------------------------------------------CAG------------------CAGCAG------------TT--------------------------------GCAGCAGCAACACT------TG------------------------------CAACAGCAACAGATGCA------GCA--------GC---------------AGCAGCAA------------CTGCAGCAACAG------------------------------CAACAGCAACTG---CAACAGCAGCAGCAGCAACTGCAGC------AACAGCA------------A-------CAACCTTCTCC-------CATGCT--GG-SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
............................................................................................CTCA--------------------------GATGATCCAACAGC---------A---GCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
.....................AGGTGA---C-----------------------------------------------------------GGCTCA--------------------------GATGATCC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAA------------CTGCAGCAACAG------------------------------......................................................................................................2040.251100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAACTGCAGC------AACAG...................................................2040.251100000
.............................................................................................................................................................................................................................................................................................AGCAGCAG----------------------------------------------------CAG------------------CAGCAG------------TT--------------------------------GCAGCA.....................................................................................................................................................................................................................................................................2560.171100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACTGCAGC------AAT.....................................................19140.071010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------AGCAGCAA------------CTGCAGCAAT......................................................................................................................................19140.071010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------CTGCAGCAACAG------------------------------CAACAGCAG.............................................................................................23200.051010000
droBip1
GG---------GTGAAGAAGGAACCGAATGCG------GTCCA---------------GAGGCA------TCTAT------C-----------GCC-----------------------------GCATCATCACC---------A---------------------------------------GCAACAGCA-----ACCCCAACAGACCGCAC------A---C------------C---T------GC------AACAGCAACATCA------------------------------------------------------------------GCAGCAG-CAG------------------CAGCAA------------CA--------GC---------------AGCAGCAGCACCACCTGCAGC------AG------------------------------------------CAGCA------G-----------CAGC------------AGCACCAC------------CACCAGCAACAA------------CAACAACAACATCATGCCCAGCAGCAGCAG---CAG------CAACACCACCAGCAGC------AGCAGCA------------G-------CAGCAGCCC--CAGGCC-------CTGG-SizeHit CountTotal NormTotal
No Reads
droKik1
AT---------C------------------------------------TACA---GCAGCAGCAACA------AC-----------------------A--------------------------------GCATTTACAGCAGCAGCAGCAGCAGCA---------------------TTTACAGCAGC--------------------------A---GCAG------------------CAA---C------------AGCATCTA------------CAG---C---------------AGCAGCAGCA---------------------ACA-------TCACCAGC------------AGC------------AACAACAACAGCATC--------------------------------TACAG---------------------------------------------CAGCAACAGCAGCAGCTGCA--------GC---------------AACATCTA------------CAGCAGCAACAGCAGCAGCATCATCTA---------------CAGCAGCAGCAG---CAT------CTACAGCAACAGCAGC------ATCTACA------------G-------CAGCAGC----------------A--GC-SizeHit CountTotal NormTotal
No Reads
droFic1
GGTATTTTAAGC------------------------------------ACAA---GCAACAGCAAC------AAC------TG-----------CAACA--------------------------------------------------------------------------------AAATCAGCAACAGCAGCAGG-------CAAATGCAGCA---------G---------------------------------------------------------------CAGCAACAGCAACCGCAGCAGCAATATATTGAGTGCCAACAACAGCAGCAA----CAT---------------CATC--------------------------------------------------------AT---------------------------------------------------CATCAGCAGCA------GCA--------GCAGCAGC---------AACGGCAG------------CAGCAGCAACAG------------AAGCAGCAA---------CAGCAACAGCAACAGCAA---------CAGCAACAGCAGC---AGCAACAGCA---------ACAG-CAA---CAACA------------CTGTGCA--GT-SizeHit CountTotal NormTotal
No Reads
droEle1
CA---------CCACTTGCGA-----------------------------------------------------------TATCGCCACTGGCTCA--------------------------GGTGCAGCAACAGC---------A---ACAACTG--------------------------------------------------------CAGC------A---A------------C---------------------AGCTACAGCAGCAACAA---TTG---CAGCA----------------------------------------------------GCAACAATTGCAG-----------------------------------------------------------------------CAGCAACAATTG------------------------------------CAGCAGCAACAATTGCAGCA--------GC---------------ATCAGCTA------------CAGCAGCAACAA------------CAGCTTCAA---------CAGCAACAGCTA---CAG------CAACAGCAGCAATTGC------AACAGCAACAACAGCAACAGACAGCTCAATCTGTGCCC------TGGCG--TACG-SizeHit CountTotal NormTotal
No Reads
droRho1
AG---------TTAAT----AGGCCAA----------------------------ACTGTGCCAA-A------TT-----------GGCAGGCACA--------------------------GCAGAAGCAACAAC---------A---GCAGCAG--------------------------------------------------------CAAC------A---A------------C---------------------AGCAACAGCAGCAACAACCAAAACAGCAGCAA----------------------------------------------------CAA------------------CAGC-----------------------------------------------------AGCAACAA------CGG------------------------------------CAGCAACAGCAGCAACAACA--------GC---------------AGCAACAA------------CAGCAGCAACAA---CAG------CAGCAGCAA---------CAGCAACAATAC---CAG------CAGCAACACCAACCAA------AACAGCA------------G-------CAACAAC----------------A--GG-SizeHit CountTotal NormTotal
No Reads
droBia1
AG---------A------------------------------------GGCA---ATTGAAGAA-------CAC-------------------GCAGCA--------------------------GCA---GTC------------------------------------------------TCAGCAACAGCA-----GCAAATTCAAATGATTC------A---GCAG---CAACAAC---------------------AG------CA------------------------------------------------------------------GCAGCAG-CAG------------------CAA-----------------------------------CAACAGCAGCAGCAGCAGCAACAACAGC------AG------------------------------------------CAGCA------G-----------CAGCAGCAACAACAGCAGCAACAA------------CAGCAGCAGCAA---CAA------CAGCAGCAG---------CAGCAACAACAG---CTG------CAACAACAACAACAGT------TGCAGCA------------G-------CAGCAACAA--CA----------------SizeHit CountTotal NormTotal
No Reads
droTak1
AG---------C------------------------------------AATT---TC---------------------------GCCGCTGGCTCA--------------------------GGTGCAACAGCAGC---------A---GCAACAGCA---------------------ATATCAGCAGC-----------------------------------------------------------------------AGTTACAGCAGCAACAA---CTG---CAGCA----------------------------------------------------GCAACAATTGCAA---------C------------AGCAACAGCTACA--GC---------------------------AGCAGCAA------CTG------------------------------------CAGCAGCAACA------A--CTACAGCAGC---------------AACAACTA------------CAGCAGCAACAA------------TTACAGCAG---------CAGCAACTACAG---CAG------CAACAGTTGCAACAGC---AACAACAGCA---------ACAG-CAG---CAACA------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
AC---------C------------------------------------AAAT---ATTACACCAACAACAACAAT------TG-----------CCAAA-----------------------------------TC---------A---TCATCATCA---------------------TCATCATCACC--------------------------A---TCA---C---------------CAT---CATCACAGTC---AG------------------C------ATCTA---------------CAA---------------------CTCCAACAA----CAA---------------CAACAA------------CAACAACAGCAGC--------------------------------AACAA---------------------------------------------CAACAACAACA------G-----------C---------------AAC---ACCAACAACAGCCGCTACACCAACAACAACAGCAATTGCAACACCAG---------CAGCAACAACAA---CAA------CAACACCACCAACAAC------AACAACA------------C-------TACCAACA---------------------SizeHit CountTotal NormTotal
No Reads
dm3
TG---------CCAGCCAAAACA-------------------------------------ACAA-------CGCACAGAACACC-------------------------------------------------------------------------------------------------GCCAGCAAC----------------AAAAAGACACA---------ACAG---------C---------------------AACAACA---------------------------------ACCCCAACAGGG-----------AGCAACAACAACC-------ACACAGAC------------AAC------------AACAGCAGCAGCA-----------------------------------GCAGCAGCAACCG------------------------------------CAGCAGCAGCAGCAACAGCA--------GC---------------AACCACAT------------CAGCAGCAGCAG------------CAACATCAT---------CCGCAGCAGCAG---TAC------CAGCAGCAACAACTGA------AACCGCA------------A-------CAACAACCA--CTGGTG-------AGTG-SizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------CAACATCAT---------CCGCAGCAGC............................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................ACACC-------------------------------------------------------------------------------------------------GCCAGCAAC----------------AAAAAGACAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................ACACAGAC------------AAC------------AACAGCAGCAGCA-----------------------------------..................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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droSim2
GC---------T--GC--------------------------------ACTACGATCCTCACCAGGA------GC-----------------------T--------------------------GCA---GTT---------------------------------------------CGA---GCAGCATCA-----GCCGCACCAGTCGCATC------A---G------------C---------------------AGCATCAGCAGCAGCAA---CAT---CAGCA----------------------------------------------------GCAACAACATCAGCAGCAACA---TCAG------------CA--------------------------GCAGC---------------------AG------------------------------------CAGCTGCAACA------G--CAACATCAGC---------------AAC------------------ATCAGCAGCTG---CAG------CATCAGCAG---------CAGCAACATCAG---CAG------CAACAACATCAGCAGC------AACATCA------------G-------CTGCAAC----------------A--TC-SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.........................................................................GC-----------------------T--------------------------GCA---GTT---------------------------------------------CGA---GCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1530.33100000000001000000
.........................................................................GC-----------------------T--------------------------GCA---GTT---------------------------------------------CGA---GCAGT...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1750.20100000000001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACATCAGCAGC------AACA....................................................1960.17100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................AACAACATCAGCAGCAACA---.............................................................................................................................................................................................................................................................................................................................1960.17100000010000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG------CAACAACATCAGCA................................................................17200.05100000010000000000
..................................................................................................................................................................................................................................................................................................CA----------------------------------------------------GCAACAACATCAGCA......................................................................................................................................................................................................................................................................................................................................17200.05100000010000000000
.......................................................................................................................................................................................................................................................................................................................................................................GCAACA---TCAG------------CA--------------------------GCAGC---------------------A......................................................................................................................................................................................................................................................18200.05100000000001000000
..............................................................................................................................................................................................................................A---G------------C---------------------AGCATCAGCAGCAGC.........................................................................................................................................................................................................................................................................................................................................................................................................................18200.05100000000001000000
droSec2
AG---------C------------------------------------ATCA---ACAAC------------AAG------TG-----------GCCGC-----------------------------------GC---------A---ACA---------------------------------TCAACAGCAGGCTG-------CAGTGGCTGC------T-------------------------------------------------CAC---------CAGCAGCAG----------------------------------------------------CAA------------------CAGCAG------------TT--------------------------GCAGC------AGCAGCAA------CAACTGCTTCAGTTGTCCATCCAACAGGCGGCT------CACCATCATCAGCAGGAGCA--------GC---------------ATCGCCAA------------CAGCAGCAACAG------------CAACACCAG---------CAGCAACAACAG---CAG------CAGCATCACCAGCAGC------AACAGCA------------G-------GGTCATCCA--CAGGC----------CC-SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCATCATCAGCAGGAGC..............................................................................................................................................................................................1912.0020110
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCATCATCAGCAGGAGCA--------GC---------------....................................................................................................................................................................2211.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATCACCAGCAGC------AACAGCA------------G-------GGT..........................2611.0010010
................................................ATCA---ACAAC------------AAG------TG-----------GCCGC-----------------------------------G......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCAGCAGGAGCA--------GC---------------ATC.................................................................................................................................................................2011.0010001
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA--------GC---------------ATCGCCAA------------CAGCAGCAACAG------------C.......................................................................................................................2611.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------CAGCATCACCAGCAGC------AACAGCA------------G-------GGT..........................2911.0010100
...................................................A---ACAAC------------AAG------TG-----------GCCGC-----------------------------------GC---------A---ACA---------------------------------....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGGAGCA--------GC---------------ATCGCCAA------------CAGC............................................................................................................................................2311.0010010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC------AACAGCA------------G-------GGTCATCCA--CA................2411.0011000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGGAGCA--------GC---------------ATCGCCAA------------CA..............................................................................................................................................2211.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATCACCAGCAGC------AACAGC..................................................2120.5010010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAG---CAG------CAGCATCA......................................................................2180.1310010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAG---CAG------CAGCATCG......................................................................22150.0710010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAG---CAG------CAGCATC.......................................................................18150.0710010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAACAG---CAG------CAGCA.........................................................................20200.0510100
droYak3
AG---------C------------------------------------ACAA---TCTGCAGGC-----------------------------GCAGCA--------------------------------TCAGAGCCACTCGCAGTTGCAGCAACA---------------------CAGTCAGCAGC-----------------AAAGTCAGC------------------------------------------------------------------------AGCAG----------------------------------------------------CAA------------------CAGCAG------------CA--------GCAGCAACAACAGCAACAGCAGCA---------GCAG---------------------------------------CAGCAACAGCAACAGCAGCAGCAGCA--------AC---------------AACAGCAA------------CAGCAGCAACAG------------CAGCAACAG---------CAGCAACAACAA---CAG------CAGCAACAGCAGCAGT------TACAGCT------------G-------CAGCAACA---------------------SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAGCAGCA--------AC---------------AACAGC..............................................................................................................................................................27201.2024000000000024
...................................................................................................................................................................................................................................................................................................AG----------------------------------------------------CAA------------------CAGCAG------------CA--------GCAGCAACAACAGC.....................................................................................................................................................................................................................................................................................27201.2024000000000024
.........................................................................................................................................CCACTCGCAGTTGCAGCAACA---------------------CAGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
................................................................................................................................................CAGTTGCAGCAACA---------------------CAGTCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
..................................................................................................A--------------------------------TCAGAGCCACTCGCAGTTGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA---CAG------CAGCAACAGCAGCAGT------T.......................................................2230.33100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAACAGCAGCA---------GCAG---------------------------------------CAGC...................................................................................................................................................................................................................2740.25100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAG---------CAGCAACAACAA---CAG------CA............................................................................25120.08101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAA---CAG------CAGCAACAGC....................................................................22180.06100100000000
............................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAGCAACAGCAGC............................................................................................................................................................................................................................................................................21200.05100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCA---------GCAG---------------------------------------CAGCA..................................................................................................................................................................................................................18200.05100010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAGCAGCA--------AC---------------A...................................................................................................................................................................20200.05101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG---------------------------------------CAGCAACAGCAACAGCAGCAGCA................................................................................................................................................................................................27200.05101000000000
....................................................................................................................................................................................................................................................................................................G----------------------------------------------------CAA------------------CAGCAG------------CA--------GCAGCAACAA.........................................................................................................................................................................................................................................................................................22200.05101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---------------AACAGCAA------------CAGCAGCA........................................................................................................................................18200.05100010000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA--------AC---------------AACAGCAA------------CAGCAGC.........................................................................................................................................21200.05100100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAG---------CAGCAACAACAA---CAG------C.............................................................................20200.05100100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GCA---------GCAG---------------------------------------CAGCAACAGCAAC..........................................................................................................................................................................................................20200.05101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGCA---------GCAG---------------------------------------CAGCA..................................................................................................................................................................................................................21200.05100001000000
......................................................................................................................................................................................................................GC------------------------------------------------------------------------AGCAG----------------------------------------------------CAA------------------CAGCAG------------CA--------GCAGCA.............................................................................................................................................................................................................................................................................................24200.05100001000000
................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAGCAACAGCAGCA---------..................................................................................................................................................................................................................................................................18200.05100010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAG------------CAGCAACAG---------CA....................................................................................................20200.05100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAG---------CAGCAACAACAA---.......................................................................................20200.05101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AG---------------------------------------CAGCAACAGCAACAGCAGC....................................................................................................................................................................................................21200.05101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAA------------CAGCAGCAACAG------------........................................................................................................................20200.05101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA---CAG------CAGCAACAGCAGCA................................................................20200.05100010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAG------------CAGCAACAG---------CAGC..................................................................................................18200.05100010000000
droEre2
AG---------C------------------------------------AAAA---TCAGAGCCA------------------------CTC--GCA--------------------------GTTGCAGCAACACA---------A---CCA---------------------------------GCAGC-----------------------AGC------A---T------------C---------------------AG------CA------------------------------------------------------------------GCAGCAG-CAG------------------CAG-----------------------------------CATCAACAGCAGCAGCAGCAGCAACAGC------AG------------------------------CAACAGCAGCAACAGCAGCAGCAGCA--------AC---------------AACAGCAA------------CAGCAGCAG---------------CAGCAACAG---------CAGCAGCATCAA---CAG------CAACAGCAGCAACAGC------AACAGCA------------G-------CAGCAGT----------------T--GC-SizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................AAAA---TCAGAGCCA------------------------CTC--GCA--------------------------GTTGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000100
.G---------C------------------------------------AAAA---TCAGAGCCA------------------------CTC--GC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100
................................................................................................................................GCAACACA---------A---CCA---------------------------------GCAGC-----------------------AGC------A---T------------C---------------------AG------CA------------------------------------------------------------------............................................................................................................................................................................................................................................................................................................................................................2711.0011000000
AG---------C------------------------------------AAAA---TCAGAGCCA------------------------CTC--GCA--------------------------GTTGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGC------AACAGCA------------G-------CAGCAGT----------------T--...2220.5010001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGC------AACAGCA------------G-------CAGCAGT----------------T--...2120.5010000010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCATCAA---CAG------CAACA.........................................................................1930.3310000100
...........................................................................................................................................................................................................................................................................................................................................................G------------------CAG-----------------------------------CATCAACAGCAGCAGCAGCAGC...................................................................................................................................................................................................................................................................2640.2510100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAGCAGCAGC..............................................................................................................................................................................................20200.1531000020
.........................................................................................................................................................................................GCAGC-----------------------AGC------A---T------------C---------------------AG------CA------------------------------------------------------------------GCAGC.......................................................................................................................................................................................................................................................................................................................................................20200.1022000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAACAGCAGCA...................................................................................................................................................................................................19200.1020002000
.................................................................................................................................................A---CCA---------------------------------GCAGC-----------------------AGC------A---T------------C---------------------AG------C...............................................................................................................................................................................................................................................................................................................................................................................................................................18100.1010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................C------AG------------------------------CAACAGCAGCAACAGCAGCA...................................................................................................................................................................................................23200.1021000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGC------AACAGCA------------G-------CAGC.........................18200.1020000020
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCA--------AC---------------AACAGCAA------------CAGCAGCA........................................................................................................................................24120.0810000010
..............................................................................................................................................................................................................................................................................A------------------------------------------------------------------GCAGCAG-CAG------------------CAG-----------------------------------CATCAACA.................................................................................................................................................................................................................................................................................22120.0811000000
....................................................................................................................................................................................................................................................................................................................................................................................................................CATCAACAGCAGCAGCAGCAGC...................................................................................................................................................................................................................................................................22160.0610001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCA--------AC---------------AACAGCAA------------CAGCAGCA........................................................................................................................................22160.0610000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC------AACAGCA------------G-------CAGCAGT----------------......18190.0511000000
..........................................................................................................................................................................................CAGC-----------------------AGC------A---T------------C---------------------AG------CA------------------------------------------------------------------GCAGCAG-C...................................................................................................................................................................................................................................................................................................................................................22200.0510000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA--------AC---------------AACAGCAA------------CAGCAGC.........................................................................................................................................20200.0510100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGC------AG------------------------------CAACAGCAGCA............................................................................................................................................................................................................24200.0510000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------------------------------CAACAGCAGCAACAGCAGCAGCAGC..............................................................................................................................................................................................27200.0511000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------------------------------CAACAGCAGCAACAGCA......................................................................................................................................................................................................19200.0510000100
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------CAACAGCAGCAACAGC------A.......................................................19200.0510000100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC---------------AACAGCAA------------CAGCAGCAG---------------C.......................................................................................................................20200.0511000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------CAGCAGCAG---------------CAGCAACAG---------C.....................................................................................................20200.0511000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA------------CAGCAGCAG---------------CAGCAACAG---------CA....................................................................................................23200.0510000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------CAGCAGCAG---------------CAGCAACAG---------CAGCA.................................................................................................25200.0510001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ATCAACAGCAGCAGCAGCA.....................................................................................................................................................................................................................................................................19200.0510000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAGCAACAGC------A......................................................................................................................................................................................................................................................18200.0511000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................AGC------AG------------------------------CAACAGCAGCAACAGCAGCAG..................................................................................................................................................................................................26200.0511000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG---------------CAGCAACAG---------CAGCAGCA..............................................................................................21200.0510001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA--------AC---------------AACAGCAA------------CAGCAGCAG---------------........................................................................................................................21200.0510001000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAGCAGCA--------.....................................................................................................................................................................................19200.0510001000
....................................................................................................................................................................................................................................................................................................................................................................................................................CATCAACAGCAGCAGCAGCA.....................................................................................................................................................................................................................................................................20200.0510000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAACAGC------AACAGC..................................................20200.0510100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAACAGC------AG------------------------------CA.....................................................................................................................................................................................................................19200.0510001000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG---------------CAGCAACAG---------CAGCAGC...............................................................................................20200.0511000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------CAGCAGCAG---------------CAGCAACAG---------CAGC..................................................................................................24200.0510000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA--------AC---------------AACAGCAA------------CAGCAGCA........................................................................................................................................20200.0510100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAGCAGCAGCAACAGC------AG------------------------------C......................................................................................................................................................................................................................24200.0510100000
............................................................................................................................................................................................GC-----------------------AGC------A---T------------C---------------------AG------CA------------------------------------------------------------------GCAGCAG-CA..................................................................................................................................................................................................................................................................................................................................................21200.0510000100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAGCAGCAGCA--------A....................................................................................................................................................................................22200.0511000000
.......................................................................................................................................................................................................................C------A---T------------C---------------------AG------CA------------------------------------------------------------------GCAGCAG-CAG------------------CAG-----------------------------------CA.......................................................................................................................................................................................................................................................................................23200.0510001000
......................................................................................................................................................................................................................GC------A---T------------C---------------------AG------CA------------------------------------------------------------------GCAGCAG-CAG------------------CA.............................................................................................................................................................................................................................................................................................................................21200.0510000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGCAGCAGCA--------AC---------------A...................................................................................................................................................................21200.0510000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAA------------CAGCAGCAG---------------CAGC....................................................................................................................19200.0510100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA--------AC---------------AACAGCAA------------CAGCAGC.........................................................................................................................................19200.0511000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGCAGCAACAGCAGCA...................................................................................................................................................................................................18200.0510000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGC------AG------------------------------CAACAGCAGCA............................................................................................................................................................................................................23200.0511000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAG---------------CAGCAACAG---------C.....................................................................................................19200.0510000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAGCAGCA--------AC---------------....................................................................................................................................................................22200.0510100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------AACAGCAA------------CAGCAGCAG---------------CAGCA...................................................................................................................23200.0510001000
.........................................................................................................................................................................................GCAGC-----------------------AGC------A---T------------C---------------------AG------CA------------------------------------------------------------------GCAGCAG-C...................................................................................................................................................................................................................................................................................................................................................23200.0510100000

Generated: 05/17/2015 at 10:05 PM