ID:

dgr_156

 Coordinate:

scaffold_14853:3558102-3558293 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-39.5 -39.4 -39.2

Flybase annnotation

CDS [Dgri\GH24289-cds]; CDS [Dgri\GH24289-cds]; exon [dgri_GLEANR_8939:5]; exon [dgri_GLEANR_8939:4]; intron [Dgri\GH24289-in]

Repeatable elements

NameClassFamilyStrand
TART_DVLINEJockey-
mature
  1. scaffold_14853:1337267-1337293 -
  2. scaffold_14853:1357057-1357083 -
  3. dgr_156  scaffold_14853:3558146-3558172 -
  4. scaffold_14853:4640958-4640984 -
  5. scaffold_15074:7620729-7620755 -
  6. scaffold_15110:3001866-3001892 -
  7. scaffold_15110:5950864-5950890 -
  8. scaffold_15110:6856953-6856979 -
  9. scaffold_15110:9622917-9622943 -
  10. scaffold_15110:13414814-13414840 -
  11. scaffold_15110:21625396-21625422 -
  12. scaffold_15110:22445281-22445307 -
  13. scaffold_15126:5453089-5453115 -
  14. scaffold_15203:7521419-7521445 -
  15. scaffold_15245:619927-619953 -
  16. scaffold_15245:5561374-5561400 -
  17. scaffold_15245:11423246-11423272 -
  18. scaffold_15252:6837529-6837555 -
  19. scaffold_15252:7194978-7195004 -
  20. scaffold_15252:12929947-12929973 -
star

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GATGGGTGGAATGTCGATGCAGCAGCCGCAGCGTTTCCTGATGCCGCCGGGTAATAATAATGCACTTCATACTCATCATCATTTGGCCAGTTTGATGGCACCGCCGGGCGTTGTGGCAACCCCCTTGGCAGCCTGCATACTGTCGTCCCAACAGCAGCAGCATCAACAGCTGCAGCAGCAACAGCAGCAGCAACAACAACAACAACAAGCACTAACACTGAACAAAACTGCATTCATTCCAGGCCAATATACACCACAACAGCAACAACAACAACAACAAACACTACAACAA
**************************************************........((((((.................((((..((((((((((((...((((((.((((...)))).)))..))).))((((...((((.......))))..))))))))))..(((((.((.......)).))))).........................))))..))))..))))))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M041
female body
........................GCCGCAGCGTTTCCTGATGCC....................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1
...........................................................................................................................................................................GCAGCAGCAACAGCAGCAGCAACAACA.............................................................................................. 27 0 20 0.05 1 1

Anti-sense strand reads

CTACCCACCTTACAGCTACGTCGTCGGCGTCGCAAAGGACTACGGCGGCCCATTATTATTACGTGAAGTATGAGTAGTAGTAAACCGGTCAAACTACCGTGGCGGCCCGCAACACCGTTGGGGGAACCGTCGGACGTATGACAGCAGGGTTGTCGTCGTCGTAGTTGTCGACGTCGTCGTTGTCGTCGTCGTTGTTGTTGTTGTTGTTCGTGATTGTGACTTGTTTTGACGTAAGTAAGGTCCGGTTATATGTGGTGTTGTCGTTGTTGTTGTTGTTGTTTGTGATGTTGTT
**************************************************........((((((.................((((..((((((((((((...((((((.((((...)))).)))..))).))((((...((((.......))))..))))))))))..(((((.((.......)).))))).........................))))..))))..))))))........************************************************** 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droGri2 scaffold_14853:3558052-3558343 - dgr_156 GAT-GG-GT-GGAA------TGTC---GATGC---------------AGC-------------AGCCGCAGC-----------------------GTTTCCTGATGCCGCCGGGTAATA--------------------------ATAATGC-ACTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTCATCAT-----------------------CATTTGGCCAGTTTGATG---GC---ACCGCCGGGCGTTGTGGCAACCCCCTTGGCAGCCTGCATACTGTCG----------------------------------------------------T---------------------------------------------------------------------------------------------------------------CC------------------------------------------------------------------CAACAGCAGCAGCATCAACAGCTGCAGC------------------AGCAA------CAGCAGC--------------------------------AGCAA----------CAACAAC-------------------------------------------------------------AACAACAAGCACTAACACTGAACAAA----ACTGCATTC------------ATT------CCAGG-CCAA-----------TATACAC-------------------------------------------------------------------------------------------CACAA------CAGCAACAA---------CAACAACAACAA------------ACACTA-CAACAA
droVir3 scaffold_12928:7048475-7048799 + GCT-GG-GC-GCCA------TGCC---GATGG---------------CC---------------------------------------------CGTTTCCTGATGCCGCCGGGTAATG--------------------------CACATGC-TCATG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAC------------------------------------------------------------------------------------------------------------------ATGCACATGCA-----------------------CATATGGCCACATTGATG---GCGGCACCGCCAGGTGTGGTTGCAACGCCGGTGGCTGCTTGCATTTTGGCCA---------------------------------------------------------CG---------------------------GCCACGCCT--------------------------------------------------------------------CTAAATAGCCATCATCAGCTGACGCCGAG-CG----------------TC---------------------------------------ATGC------------------AACAGCAA------CAGCAGC--------------------------------AGCAA----------CAACAAC-------------------------------------------------------------AACAACAAACACTAACACAGAACAAA----ACTGCATTC------------ATT------CCAGG-CCAA-----------TATGCACCACCACA----------------ACCACCG--TCAGCACCC--------------------------------------------ACA-----C------------AACAACAACAACAACAA------------------------CAA-CAGCAA
droMoj3 scaffold_6328:2719606-2719942 + dmo_510 GCT-GG-GC----A------TGTC---GATGC---------------CA---------------------------------------------CGGTTTCTGATT---CCCGGTAATG--------------------------CACATGC-ACATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACATCCACATCCACATGTCCATGCGCACTC----------------------------------------------------------------------GCA--------------------TGCA-----------------------CATATGGCCACGTTGATG---GCGGGGCCGCCGGCAGTTGTTGCGGCTCCAGTGGCTGCTTGTATTTTGGCC------------------------------------------------------------------------------ACGCCACAGGCCACGCC-----------------------------------------------------------------------------CCGT--------------------------CA-------T-----------------------------------------------C------ATCATCAGCAGCAGCAG------CAGCAGC--------------------------------AGCAACAAAAGCCA-CAACAGC-------------------------------------------------------------AGCAACAATCACTAACACAAAACAAA----ACTGCATTC------------ATT------CCAGG-CCAA-----------TATGCACCACAAGC----------------ACCACCG--TCAACACCC--------------------------------------------ACA-----C------------AACAGCAACAACAACAG------------------------CAA-CAGCAA
droWil2 scf2_1100000004768:2244162-2244464 + GCG-GGA-ATG-GG------TGTT---GGTGC--------T----------------GGTGGTGGCCATGTC---------------ATCA--------T---------------------------------------------------------------------------------------------------TACACCGCCGCCGCGTGATGA-GATGCAGCAACAGCAGCATCTTCA-------TCAT--------------------------------------------------------------------------------------------------------CATCCT------------AGCCATCACAGTCAGACG---------------------------------------------------------------------CA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCAGCAGC---------------------------------------------------------------------------------------------------------------------TGT---CA------CAGCAGCAGCAAC--------------------------------A---ACAACA----GCAGCAACAGCAACAACAACAG-CAG------------------------CA---------------------G--------------------------CAACA---TCAACAGCATCAG------------------------------------------CCAGCGCATCA-CCTGCAACATC-----AGCAGCCATCTCATCATCCACTTCCTCACACACCGCACCCGCTTCATCATCA-----------------AACAACAG---------CAACAGCAGCA-------------GCTCTG-CAACAT
dp5 4_group1:4423100-4423406 - GCA-GAA-GAT-GC---------C---GCCG---------------------ATGCAGG----TGCCACACCACCC-------------------------------------------------------------GA------------------------------CGATCATCAGCAAGG-----------TGGT-------------------GACAGTGCAGCCGCAGCAGGCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCCAATCGCA---------GGTGG--CAA--GCTCCCC------------------------------------------------------------------------------------------------------------GCCTTTAGGCAGCCTGCCGCCTCTTGGGCACAA------------GAGCCTCCACG---------------TGA--A-----------------TGCA------------------------------------------------------------------------------------------------------------------------------------------------CAGCCACAGCCGCCACATCATCAGGCGC---AACAGCAG------CAGCAGC--------------------------------AGCAACAGCAGCAA-CAACAA------CA----------------------------------------------------------------GTTGTCGCCGCAAATG----A--------------------TGTCCAAGAT-------------------------------------------------------------GACGGCA--------------------------------------------GCAC--ATCAG------CAGCATCAA---------CATCAGCAGCAAGTGCACCAG---TTTATG-CACCAG
droPer2 scaffold_4:242127-242354 - TCC-CA-CC-C-------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------------------------------------------------------------------TCG-------TCAT------CGGCCT-----------------------------------CGGTCAGCACCACTGGCGTTGTCTCCACCACCACAATC-T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCAGCACCAC------------------------------------------------C------AGCAGC---AA---CAGCAG---CAGCAGC--AAC---------A---------------------GCAACAGCAA-CAACAA------CA-------------------G---------------C--------------------------------------------AGCAGCAGCATCC----------------CGGGGACATTGTGAGTGCCGCAGGCGTGGGGAGTGCAGGC----------------TCCATTGTCTCGACGGCG--------------------------------------------GTGC--AACAG------CAGCAACAG---------CAACAACAGCAG---------------CAG-CAGCAG
droAna3 scaffold_13117:1916217-1916470 - GAT-GA-TC-GGGA------TGTCAGGAATGA---------------AGCA-------------GCAGCAGC-----------------------TTTGTTTGAT--------------------------------------------------------------------------------------------------------------------AATACAGCA-------------------------AC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTCTTCTAATCAACCATTTACTAACCAACTCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATC--GATCGATC--------CCACCTCGACTAAC------GCACCACCACCACACCAACACTTACTCC------------------AACAA------CATCAAC--------------------------------ATCAA----------CATCAACAA---CA---CCACTCT-CT--------------ACAATCAACAACGG---------C----------------------------A----ACTGCAATC------------AT--------------------------------------------------CAATC--------------AAC------------------------------------------------------AACAA------CCATCAT-T---------CACCAACATGAA------------ACAATC-AAACAA
droBip1 scf7180000395982:73347-73646 - GC-AGCA-ACG-CATGGGCCTGGCCGGGATGC---------------AGCCGCTGAT----------T-----------------------CAGCGCTACGGAATG---CCGGGTAATG--------------------------C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAACCCCGCAGCACCTGGCCTTAATGAGT---AC---GC------CAGTGGGTGCTGCTCCTACGGCAGCTTGTCTGCTACCCT---------------------------------------------------------TG---------------TCCCTGCCG-----------------------------------------------------------------------------------------------------------ATT--CATCCATCCCACTCC------------------------------------------------C------AGCAAC------AGCAGCCACAAC---AGA--AAC---------AGC---------------------AAC--------------------------------------------------------------------------A---A------CAAACACTGAACAAA----CCAACATTC------------ATTCCAATTCCAGG-CCAG-----------TACCCGCCAACCCA----------------GCCA-----------------------------------------------------------C----CCAAT------CAGTCATCA---------CAACAACAACAA------------GCAC-C-GACTAA
droKik1 scf7180000302274:149208-149528 - AGCAGCA-GCA-AC-------------------------------------------------------AGCAGC---------------A--------GCA-----------------GCAACTGCTCAATAGCCTGAGCAATAATAATGT--------------------------------TGCCAATGGCAACTTGCCAC----------------------------------------------------------------------------------------------------------------------------CACCAACGCAATTGTTGCAGCATCATCTGCAACATTTGGCGCATGT----------------------------------------------------------------------GAA--------------------TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGA--A-----------------TGCAGCAGCGGCAGTGGTGGCTGTGGCAGCCAACAACCTGCAACAGCAGCAG----------------------------------------------------------------CAGCAACTTGCCAC------CGGC---------------------------------------------------------A--------------------------------------ACAACA----------GCAA---CA---CCAGTCC-CG--------------GCA-GCAACAATAA---------C---AACAACATACTCAATCACA--ACAATC---------T------------CAA------------------------------------------T----------------ATCATTA--TCAATAACC--------------------------------------------AT----AATAA------TAGTAACAA---------TAATAATAACAA-------------CAATC-CAGCAA
droFic1 scf7180000453882:683901-684178 + AGT-GTT-AAT-GC---------T---GCTGCTGCTGCT------------------AG----TTTCGTGCCCGCC-------------------------------------------------------------GA------------------------------GGTGCGTCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAATGCCACTCA------------------------------------------------------------------------------------------------------------------------------------------GCGTTG-GACGGTG--------------CGGAGGCGCGTGCGCGT------------------------GCTGA--A-----------------TACACTGGCAACAACA-----------------------------AGGGCGGCAGCAGCAACAACAAC------------------------------AG----------------CGG-----------CAACAG------CAGCAACACTG---------------------------------------------GG--AGCAGCGATAGCAACGATAGCAGCAACAACA---GCAACA----CTAGCTG-------------------CA--------------------------------------------------------------ACAACA---------G------------TAG------------------------------------------C----------------ATTAGGA--GCAACAACG---------------------C----------------------GGAC--AATAT------CAGCAACAA---------CAATAGCTGCAA------------TATCAG-CAGCAA
droEle1 scf7180000491001:1403819-1404071 + GC-AACA-GCA-GCAA---------------------CA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCTCGCATCCGCAG-CAGCAACATTCGCCTCACTCTTTGGTGAGGGTGAAGAAGGAGCCGAATGTTGGTCAGCGTCAC-----------------------TTGTCGCCGCATCACCCGCAACAGTC-------------------------------GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC------------------------------CACCTGCAGCACCAC------------------------------------------------C------AGCAGC------AGCAGCAGCAGC---AGC--AAC---------AGC---------------A---ACAACA----GCAGCAG-------------------CAACAACAG---------------C--------------------------------------------AGCAGCAGCATCT------------A------------------------------------------CACC------------------------AGCAGC---------------------------------------------------AACAG------CAGCAACAC---------CACCAGCAACAA------------CAGCAG-CAACCG
droRho1 scf7180000779189:266920-267189 - GGG-CA--------------TGGCCGGAATGC---------------AGCCCCCGCC----------T-----------------------CAACGATACGCCATG---CCGGGTAATG--------------------------C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCACCACCGCAGCACCTGGCTCTGAT---GAGCAC---GC------CAGTGGGTGCTGCTTCCACCGCCGCCTGCCTCCTCCCCCT---------------------------------------------AACCGTTCCCGTGTCCCCGCTCACCCTGTCTATACCACAAGCCCATCC-----------------------------------------------------------------------------AAAC--------------------------CA-------T-----------------------------------------------C------AAGCCCAT---------------------C--AAC---------AAC---------------------AAC--------------------------------------------------------------------------A---G------CAAACACTGAACAAT----CCGACATTC------------ATTCCAATTCCAGG-CCAG-----------TACCCGCCAACTCA----------------GCCA-----------------------------------------------------------------------------------------------------------------------------CCCAA
droBia1 scf7180000301715:550484-550751 - GC-AGCA-GCG-GC-------------------------------------------------------AGCGGC---------------G-------------------------GCAGCGGCCCACCACCATGCCGC------------------------------CCATCATCTGCTGGCCGCCAATGGCATGGTGCCA----------------------C------------------------------------------------------------------------------------------------------ACCC---------------------CCTGGCCGCCCATCCGCACTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATGTCCCGGTGGCAATGCATC----------------------------------------------------------------------------------------------CC------------------------------CAGCTG------------------------------------CAGCAGCACCAGAAGGAGCAGC------AGC------AA------CAGCAGCAGCAGCAG-----------------------------CA---TCAGCA----GCAGCACTTGCAACA---GCAG-GAG------------------------C--------------------------------------------------AGCAGCAGCAACAGGAGCAG---------------------------------------------------------------------------------------------------------------------------------TTGCAGCTACAGCAGCAG---------CAGCAGCAGCCA------------GAGCCAACAGCAA
droTak1 scf7180000415868:193364-193627 - GC-AGCA-GCA-GC-------------------------------------------------------AGCAAC-----------------------ACCTGCC------------------------------------------------------------------------------------------------------------------------------------------------------G--------------------------------------------------------------------------------------------------------CAGCC-------------------------------AGCCCATCTGCAGTCCTCGC---AGGCCCAGTCGCACTTGACCCAGTTGGCGCAATACTATCCA------------------------------------------------------------------------------------------------------------GCCTTCCCCCAGCCCATCGCCTCCC-----------AGTACACGG------------------------CCTGC--A-----------------TGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAGCAA------CAGCAGCAGCAGC--------------------------------AGCAACAACA----GCAGCAGCAA---CA---GCAGGCGGCCT------ATGCGCAG-------CAGCAGCACCAGCAGGCCT--------------------------------------A------------C------------------------------------------A----------CGC--------------AGC------------------------------------------------------AGCAG------CAGCAGCAG---------GCGCAGCAGCA-------------GCGCCA-GGAGAA
droEug1 scf7180000409672:1853623-1853907 - GAT-CA-AC-GTGT---------T---GCTGT--------C----------------TGCCGCGATCACGCC---------------AACA--------GCCAGTGCCGTCG------------------------CAAGCAGTGTAAATACTACCACATACC------GATTGTCCTGCCGCCGGCCAAC---------------------------------------------------------------AT--------------------------------------------------------------------------------------------------------CATGGC------------GGCCATGATCACCAGTCC---------------------------------------------------------------------CA---------------------------------------------------------------------------------GTGATCAGCAGCC----------------------------------------------------GGCTGTACCGGT---------------------------------------------------------------------------------------------------------------------------------------GG----------------CCA-----------CAACAA------------------CAGCTAATCC------GGCAGC------------------AGCAGC--------------------------------AGCAG----------CAGCAGCAG---CA---ACAGCCGGCTACAACGG---------------C--------------------------------------------ACCAGCAACTT---------------------------------------------------------GATCATCATCGAGC--------------CGC------------------------------------------------------AGCAG------CAGCAACAG---------CAACAGCAGCAG------------CCGCCG-CAACAG
dm3 chrX:10753391-10753660 + GGG-CA--------------TGGCCGGGATGC---------------AACCGCCGCC----------A-----------------------CAGCGATATGGCATG---CCGGGTAATG--------------------------C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCACCACCGCAGCACCTGGCTCTGAT---GAGCAC---GC------CAGTGGGTGCTGCTCCCACCGCCGCCTGCCTTCTCCCACT---------------------------------------------AACCGTTCCCGTAACCCCGCTCACCCTGTCCATACCGCAAGCCCATCC-----------------------------------------------------------------------------CAGC--------------------------CA-------T-----------------------------------------------C------AAGTTCAT---------------------C--AAC---------AAC---------------------AAC--------------------------------------------------------------------------A---G------CAAACACTGAGCAAT----CCGACATTC------------ATTCCAATTCCAGG-CCAG-----------TACCCGGCAACTCA----------------GCCA-----------------------------------------------------------------------------------------------------------------------------CCCAA
droSim2 x:4630704-4630937 - GC-AACA-GCA-GCAG---------------------CATCTTCAGCAACAGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAACACCATC--ATCCGCATCATCATCTGAAGCTGGACAACAGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAACCACCCAC------CGACCGCAGCAGCAGCCGCAGCTGCCGT------------------AGCAG------TAGCAGC--------------------------------AACAA----------CTGCAGCAA---CA---GCAGCCG-CA--------------GCAACCAACAACAG---------CGCT--------------------------------------T------------C------------------------------------------CTTC------------------------AGCAGCA--------------------------------------------ACA-GCAGCAG------TAGCAATAG---------CAACAACAGCAA------------TCACTT-GGACAA
droSec2 scaffold_4:1772388-1772612 + GC-AACA-GCA-GCAG---------------------CATCTTCAGCAACAGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCCACACCATC--ATCCGCATCATCATCTGAAGCTGGACAACAGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAACCACCCAC------CGACCGCAGCAGCAGCCGCAGCTGCCGT------------------AGCAG------TAGCAGC--------------------------------AACAA----------CTGCAGCAA---CA---GCAGCCG-CA--------------GCAACCAACAACAG---------CGCT--------------------------------------T------------C------------------------------------------C----------TTC--------------AGC------------------------------------------------------AGCAG------TAGCAATAG---------CAACAACAGCAA------------TCACTT-GGACAA
droYak3 3L:8358749-8359012 - GAT-CA-GC-AG-A------TGAT---GATGC---------------AGC-------------AGC------------------------A--------GCA--------------------------------------------------------------------------------------------------------------------------------------GAATCTGCACACGCAG-C---------------------------------------------------------------------------ACCAGCACAAT---------------------------------------------------------------CTGCAGGCGCAGCATCAGAGCCACTCGCA---------GTTGCAGCAACACAGTC--AGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTCAGCAGCAGCAACAGCAGC------------------------------AG----------------CAG-----------CAACAA---------------------------C------AGCAAC------AGCAG------CAGCAGC--------AGCAACAGC---------------A---ACAGCA----GCAGCAG-------------------CAACAACAG---------------C--------------------------------------------AACAGCAGCAA------------------------------------------------------------C------------------------AGCAGC---------------------------------------------------AACAG------CAGCAACAA---------CAACAGCAGCAACAGCAGCAGTTACAGCTG-CAGCAA
droEre2 scaffold_4845:14496865-14497121 + TGCAGCA-GCC-AC-------------------------------------------------------ATCGTCCCAGCGTCACCCAGCA-------------------------GCA--------------------------ACTGCCC-TCCACTTCCTCGCAGTCCATCTTCAACAAGC-----------TGGT-------------------GCAA---C------------------------------------------------------------------------------------------------------A---------------------------------GTC---GCAGTTCTATATCAACCACAATCAGCAG---------------------------------------------------------------------TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCACAGCAGC---------------------------------------------------------------------------------------------------------------------------AA------CATCACCAGCAGCAG-----------------------------CA---TCAACA----GCAGCACCAGCATCAGTATCAG-CAG------------------------CA---------------------G--------------------------CAGCA---GCATCAGCATCAG------------------------------------------CACCAGCATCAGCC--------------TGC---A--------------------------------------------AC-----GCAG------CAGCATCAG---------CATCAACAGGCA------------ACGCAG-CAGCAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droGri2
GAT-GG-GT-GGAA------TGTC---GATGC---------------AGC-------------AGCCGCAGC-----------------------GTTTCCTGATGCCGCCGGGTAATA--------------------------ATAATGC-ACTTC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACTCATCAT-----------------------CATTTGGCCAGTTTGATG---GC---ACCGCCGGGCGTTGTGGCAACCCCCTTGGCAGCCTGCATACTGTCG----------------------------------------------------T---------------------------------------------------------------------------------------------------------------CC------------------------------------------------------------------CAACAGCAGCAGCATCAACAGCTGCAGC------------------AGCAA------CAGCAGC--------------------------------AGCAA----------CAACAAC-------------------------------------------------------------AACAACAAGCACTAACACTGAACAAA----ACTGCATTC------------ATT------CCAGG-CCAA-----------TATACAC-------------------------------------------------------------------------------------------CACAA------CAGCAACAA---------CAACAACAACAA------------ACACTA-CAACAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................................................GCCGCAGC-----------------------GTTTCCTGATGCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC------------------AGCAA------CAGCAGC--------------------------------AGCAA----------CAACA....................................................................................................................................................................................................................................................................................................................27200.05110
droVir3
GCT-GG-GC-GCCA------TGCC---GATGG---------------CC---------------------------------------------CGTTTCCTGATGCCGCCGGGTAATG--------------------------CACATGC-TCATG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAC------------------------------------------------------------------------------------------------------------------ATGCACATGCA-----------------------CATATGGCCACATTGATG---GCGGCACCGCCAGGTGTGGTTGCAACGCCGGTGGCTGCTTGCATTTTGGCCA---------------------------------------------------------CG---------------------------GCCACGCCT--------------------------------------------------------------------CTAAATAGCCATCATCAGCTGACGCCGAG-CG----------------TC---------------------------------------ATGC------------------AACAGCAA------CAGCAGC--------------------------------AGCAA----------CAACAAC-------------------------------------------------------------AACAACAAACACTAACACAGAACAAA----ACTGCATTC------------ATT------CCAGG-CCAA-----------TATGCACCACCACA----------------ACCACCG--TCAGCACCC--------------------------------------------ACA-----C------------AACAACAACAACAACAA------------------------CAA-CAGCAASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................C---GATGG---------------CC---------------------------------------------CGTTTCCTGATGCCGC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAAC-------------------------------------------------------------AACAACAAACACTAACAC...................................................................................................................................................................................................................................2511.001000000000000000000000000010000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGCCACATTGATG---GCGGCACCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACA----------------ACCACCG--TCAGCACCC--------------------------------------------........................................................................2111.001000000000000000000000000000000000000000000000000000000100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGC------------------AACAGCAA------CAGCAGC--------------------------------AGCAA----------.........................................................................................................................................................................................................................................................................................................................2430.331000000000000000000100000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA------CAGCAGC--------------------------------AGCAA----------CA.......................................................................................................................................................................................................................................................................................................................19200.102000000000000000000020000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC--------------------------------AGCAA----------CAACAAC-------------------------------------------------------------A....................................................................................................................................................................................................................................................19200.102000000000000000000000000000000002000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA------CAGCAGC--------------------------------AGCAA----------CAAC.....................................................................................................................................................................................................................................................................................................................21200.102000000000000000001000000000000100000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC--------------------------------AGCAA----------CAACAAC-------------------------------------------------------------AACAAC...............................................................................................................................................................................................................................................21200.051000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C--------------------------------------------ACA-----C------------AACAACAACAACAACAA------------------------CA........24200.051000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------CAGCAGC--------------------------------AGCAA----------CAACAAC-------------------------------------------------------------.....................................................................................................................................................................................................................................................20200.051000000000000000010000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAA------CAGCAGC--------------------------------AGCAA----------CA.......................................................................................................................................................................................................................................................................................................................22200.051000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------------------AACAGCAA------CAGCAGC--------------------------------AGCAA----------CA.......................................................................................................................................................................................................................................................................................................................24200.051000000000000000000000000000000000000000000000000000000000000100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C------------------AACAGCAA------CAGCAGC--------------------------------AGC.....................................................................................................................................................................................................................................................................................................................................19200.051001000000000000000000000000000000000000000000000000000000000000
droMoj3
GCT-GG-GC----A------TGTC---GATGC---------------CA---------------------------------------------CGGTTTCTGATT---CCCGGTAATG--------------------------CACATGC-ACATC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CACATCCACATCCACATGTCCATGCGCACTC----------------------------------------------------------------------GCA--------------------TGCA-----------------------CATATGGCCACGTTGATG---GCGGGGCCGCCGGCAGTTGTTGCGGCTCCAGTGGCTGCTTGTATTTTGGCC------------------------------------------------------------------------------ACGCCACAGGCCACGCC-----------------------------------------------------------------------------CCGT--------------------------CA-------T-----------------------------------------------C------ATCATCAGCAGCAGCAG------CAGCAGC--------------------------------AGCAACAAAAGCCA-CAACAGC-------------------------------------------------------------AGCAACAATCACTAACACAAAACAAA----ACTGCATTC------------ATT------CCAGG-CCAA-----------TATGCACCACAAGC----------------ACCACCG--TCAACACCC--------------------------------------------ACA-----C------------AACAGCAACAACAACAG------------------------CAA-CAGCAASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-----------TATGCACCACAAGC----------------ACCAC.................................................................................................................................2111.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCAGCAGCAGCAG------CA.............................................................................................................................................................................................................................................................................................................................................................................19200.051000100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------------------CA-------T-----------------------------------------------C------ATCATCAGCAGCAGCA......................................................................................................................................................................................................................................................................................................................................................................................21200.051000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T-----------------------------------------------C------ATCATCAGCAGCAGCAG------CAGCA..........................................................................................................................................................................................................................................................................................................................................................................24200.051100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------------------------CA-------T-----------------------------------------------C------ATCATCAGCAGCAGCAG------CA.............................................................................................................................................................................................................................................................................................................................................................................24200.051100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCAGCAGCAGCAG------C..............................................................................................................................................................................................................................................................................................................................................................................18200.051000010
droWil2
GCG-GGA-ATG-GG------TGTT---GGTGC--------T----------------GGTGGTGGCCATGTC---------------ATCA--------T---------------------------------------------------------------------------------------------------TACACCGCCGCCGCGTGATGA-GATGCAGCAACAGCAGCATCTTCA-------TCAT--------------------------------------------------------------------------------------------------------CATCCT------------AGCCATCACAGTCAGACG---------------------------------------------------------------------CA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCAGCAGC---------------------------------------------------------------------------------------------------------------------TGT---CA------CAGCAGCAGCAAC--------------------------------A---ACAACA----GCAGCAACAGCAACAACAACAG-CAG------------------------CA---------------------G--------------------------CAACA---TCAACAGCATCAG------------------------------------------CCAGCGCATCA-CCTGCAACATC-----AGCAGCCATCTCATCATCCACTTCCTCACACACCGCACCCGCTTCATCATCA-----------------AACAACAG---------CAACAGCAGCA-------------GCTCTG-CAACATSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................................................................................................................................................................................................................................AGCCATCACAGTCAGACG---------------------------------------------------------------------CA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.00330000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCAGCAGC---------------------------------------------------------------------------------------------------------------------TGT---CA------CAGCAG...............................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.....GA-ATG-GG------TGTT---GGTGC--------T----------------GGTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
............................................................................................................................................................................................................CGCCGCCGCGTGATGA-GAT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
...........................................................................................................................................................................................................................................AGCATCTTCA-------TCAT--------------------------------------------------------------------------------------------------------CATCCT------------AGCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100010
.........................................................................................................................................................................................................................................GCAGCATCTTCA-------TCAT--------------------------------------------------------------------------------------------------------CATCCT------------AGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100001
.....GA-ATG-GG------TGTT---GGTGC--------T----------------GGTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAGC---------------------------------------------------------------------------------------------------------------------TGT---CA------CAGCAGC..............................................................................................................................................................................................................................................................................................................................................................................2111.00100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---TCAACAGCATCAG------------------------------------------CCAGC..................................................................................................................................................1911.00100010
........ATG-GG------TGTT---GGTGC--------T----------------GGTGGT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------G--------------------------CAACA---TCAACAGCATCAG------------------------------------------CCAGCGC................................................................................................................................................2711.00100010
.............................................................................................................................................................................................................................................................CAT--------------------------------------------------------------------------------------------------------CATCCT------------AGCCATCACAGTCAGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000
......A-ATG-GG------TGTT---GGTGC--------T----------------GGTGGTGGCC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100100
.......................................................................................................................................................................................................................................................................................................................................................................................................AGACG---------------------------------------------------------------------CA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATCAGCAGC---------------------------------------------------------------------------------------------------------------------T..................................................................................................................................................................................................................................................................................................................................................................................................1920.50100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CA------CAGCAGCAGCAAC--------------------------------A---ACAACA----GCA.......................................................................................................................................................................................................................................................................................................................2530.33100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------------------CA---------------------G--------------------------CAACA---TCAACAGCATCA..................................................................................................................................................................................................2150.20100100
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAC--------------------------------A---ACAACA----GCAGCAAC..................................................................................................................................................................................................................................................................................................................19200.15300030
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A------CAGCAGCAGCAAC--------------------------------A---ACAACA----GC........................................................................................................................................................................................................................................................................................................................23200.15300030
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAACAACAACAG-CAG------------------------CA---------------------.................................................................................................................................................................................................................................................25200.10202000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAG-CAG------------------------CA---------------------G--------------------------CAAC..................................................................................................................................................................................................................22200.10200020
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-CAG------------------------CA---------------------G--------------------------CAACA---TCAACA........................................................................................................................................................................................................19200.10200011
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC--------------------------------A---ACAACA----GCAGCAACAGC...............................................................................................................................................................................................................................................................................................................21200.10200020
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAG-CAG------------------------CA---------------------G--------------------------CA....................................................................................................................................................................................................................20200.10200020
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAG-CAG------------------------CA---------------------G--------------------------CAACA---TC............................................................................................................................................................................................................24110.09100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAC--------------------------------A---ACAACA----GCAGCAACAGCAA.............................................................................................................................................................................................................................................................................................................23200.05101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAACAACAACAG-CA.................................................................................................................................................................................................................................................................................................21200.05101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAACAACAG-CAG------------------------CA---------------------.................................................................................................................................................................................................................................................20200.05100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAACAACAG-CAG------------------------CA---------------------G--------------------------CAACA---..............................................................................................................................................................................................................25200.05100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAACAG-CAG------------------------CA---------------------.................................................................................................................................................................................................................................................18200.05100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCAAC--------------------------------A---ACAACA----GCAGCAA...................................................................................................................................................................................................................................................................................................................23200.05101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA----GCAGCAACAGCAACAACAACA.....................................................................................................................................................................................................................................................................................................26200.05100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC--------------------------------A---ACAACA----GCAGCAACAGCA..............................................................................................................................................................................................................................................................................................................21200.05100010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------------------CA---------------------G--------------------------CAACA---TCAACAGCA.....................................................................................................................................................................................................18200.05100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-CAG------------------------CA---------------------G--------------------------CAACA---TCAAC.........................................................................................................................................................................................................18200.05100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAACAG-CAG------------------------CA---------------------G--------------------------CAA...................................................................................................................................................................................................................20200.05100100
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAG-CAG------------------------CA---------------------G--------------------------CAACA---..............................................................................................................................................................................................................23200.05100001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAACAACAACAG-C..................................................................................................................................................................................................................................................................................................21200.05101000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACA----GCAGCAACAGCAACAAC.........................................................................................................................................................................................................................................................................................................22200.05101000
dp5
GCA-GAA-GAT-GC---------C---GCCG---------------------ATGCAGG----TGCCACACCACCC-------------------------------------------------------------GA------------------------------CGATCATCAGCAAGG-----------TGGT-------------------GACAGTGCAGCCGCAGCAGGCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ACCCAATCGCA---------GGTGG--CAA--GCTCCCC------------------------------------------------------------------------------------------------------------GCCTTTAGGCAGCCTGCCGCCTCTTGGGCACAA------------GAGCCTCCACG---------------TGA--A-----------------TGCA------------------------------------------------------------------------------------------------------------------------------------------------CAGCCACAGCCGCCACATCATCAGGCGC---AACAGCAG------CAGCAGC--------------------------------AGCAACAGCAGCAA-CAACAA------CA----------------------------------------------------------------GTTGTCGCCGCAAATG----A--------------------TGTCCAAGAT-------------------------------------------------------------GACGGCA--------------------------------------------GCAC--ATCAG------CAGCATCAA---------CATCAGCAGCAAGTGCACCAG---TTTATG-CACCAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAA------CA----------------------------------------------------------------GTTGTCGCCGCAAATG----A--------------------T.................................................................................................................................................................................................2611.0010000100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGGCGC---AACAGCAG------CAGCAGC--------------------------------........................................................................................................................................................................................................................................................................................................................................2411.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCAAATG----A--------------------TGTCCAAGAT-------------------------------------------------------------GACGGCA--------------------------------------------GC......................................................................2811.0010010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAT-------------------------------------------------------------GACGGCA--------------------------------------------GCAC--ATCA..............................................................1911.0010000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACG---------------TGA--A-----------------TGCA------------------------------------------------------------------------------------------------------------------------------------------------CAGCCACAGCC.................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A--------------------TGTCCAAGAT-------------------------------------------------------------GACGGCA--------------------------------------------GCAC--ATCAG------C......................................................2811.0010000000001
....GAA-GAT-GC---------C---GCCG---------------------ATGCAGG----TG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000001000
..................................................................................................................................................................................GCAAGG-----------TGGT-------------------GACAGTGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCCACG---------------TGA--A-----------------TGCA------------------------------------------------------------------------------------------------------------------------------------------------CAGCCAC.....................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCGCCTCTTGGGCACAA------------GAGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
.....................................................................................................................................................................................................GT-------------------GACAGTGCAGCCGCAGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..........................................................................CC-------------------------------------------------------------GA------------------------------CGATCATCAGCAAGG-----------TGGT-------------------............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAGCCTGCCGCCTCTTGGGCACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA------CA----------------------------------------------------------------GTTGTCGCCGCA...............................................................................................................................................................................................................................1911.0010000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAA---------CATCAGCAGCAAGC.......................1930.3310010000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGC---AACAGCAG------CAGCAGC--------------------------------AG......................................................................................................................................................................................................................................................................................................................................20200.0510010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG------CAGCAGC--------------------------------AGCAACAGCAGCAA-C........................................................................................................................................................................................................................................................................................................................24200.0510100000000
droPer2
TCC-CA-CC-C-------------------------------------------------------------------------------------------------------------------C-------------------------------------------------------------------------------------------------------------------TCG-------TCAT------CGGCCT-----------------------------------CGGTCAGCACCACTGGCGTTGTCTCCACCACCACAATC-T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGCAGCACCAC------------------------------------------------C------AGCAGC---AA---CAGCAG---CAGCAGC--AAC---------A---------------------GCAACAGCAA-CAACAA------CA-------------------G---------------C--------------------------------------------AGCAGCAGCATCC----------------CGGGGACATTGTGAGTGCCGCAGGCGTGGGGAGTGCAGGC----------------TCCATTGTCTCGACGGCG--------------------------------------------GTGC--AACAG------CAGCAACAG---------CAACAACAGCAG---------------CAG-CAGCAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---AA---CAGCAG---CAGCAGC--AAC---------A---------------------....................................................................................................................................................................................................................................................................................................................................22200.102002000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC---AA---CAGCAG---CAGCAGC--A.....................................................................................................................................................................................................................................................................................................................................................................21200.102002000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC------------------------------------------------C------AGCAGC---AA---CAGCAG---CAGCA..........................................................................................................................................................................................................................................................................................................................................................................22200.051000010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGC---AA---CAGCAG---CAGCAGC--A.....................................................................................................................................................................................................................................................................................................................................................................22200.051000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAA-CAACAA------CA-------------------G---------------C--------------------------------------------AGCAGCAGC..................................................................................................................................................................................................................22200.051010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAA-CAACAA------CA-------------------G---------------C--------------------------------------------AGCAGCA....................................................................................................................................................................................................................22200.051001000
droAna3
GAT-GA-TC-GGGA------TGTCAGGAATGA---------------AGCA-------------GCAGCAGC-----------------------TTTGTTTGAT--------------------------------------------------------------------------------------------------------------------AATACAGCA-------------------------AC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTCTTCTAATCAACCATTTACTAACCAACTCCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATC--GATCGATC--------CCACCTCGACTAAC------GCACCACCACCACACCAACACTTACTCC------------------AACAA------CATCAAC--------------------------------ATCAA----------CATCAACAA---CA---CCACTCT-CT--------------ACAATCAACAACGG---------C----------------------------A----ACTGCAATC------------AT--------------------------------------------------CAATC--------------AAC------------------------------------------------------AACAA------CCATCAT-T---------CACCAACATGAA------------ACAATC-AAACAASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATC------------AT--------------------------------------------------CAATC--------------AAC------------------------------------------------------AACAA------CCA....................................................2311.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCACCACACCAACACTTACTCC------------------AAC.......................................................................................................................................................................................................................................................................................................................................................................................2611.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAACAACGG---------C----------------------------A----ACTGCAATC------------AT--------------------------------------------------CA............................................................................................................................................2611.001000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCT-CT--------------ACAATCAACAACGG---------C----------------------------A----ACT....................................................................................................................................................................................................................2611.001100000
droBip1
GC-AGCA-ACG-CATGGGCCTGGCCGGGATGC---------------AGCCGCTGAT----------T-----------------------CAGCGCTACGGAATG---CCGGGTAATG--------------------------C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCAACCCCGCAGCACCTGGCCTTAATGAGT---AC---GC------CAGTGGGTGCTGCTCCTACGGCAGCTTGTCTGCTACCCT---------------------------------------------------------TG---------------TCCCTGCCG-----------------------------------------------------------------------------------------------------------ATT--CATCCATCCCACTCC------------------------------------------------C------AGCAAC------AGCAGCCACAAC---AGA--AAC---------AGC---------------------AAC--------------------------------------------------------------------------A---A------CAAACACTGAACAAA----CCAACATTC------------ATTCCAATTCCAGG-CCAG-----------TACCCGCCAACCCA----------------GCCA-----------------------------------------------------------C----CCAAT------CAGTCATCA---------CAACAACAACAA------------GCAC-C-GACTAASizeHit CountTotal NormTotal
No Reads
droKik1
AGCAGCA-GCA-AC-------------------------------------------------------AGCAGC---------------A--------GCA-----------------GCAACTGCTCAATAGCCTGAGCAATAATAATGT--------------------------------TGCCAATGGCAACTTGCCAC----------------------------------------------------------------------------------------------------------------------------CACCAACGCAATTGTTGCAGCATCATCTGCAACATTTGGCGCATGT----------------------------------------------------------------------GAA--------------------TG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGA--A-----------------TGCAGCAGCGGCAGTGGTGGCTGTGGCAGCCAACAACCTGCAACAGCAGCAG----------------------------------------------------------------CAGCAACTTGCCAC------CGGC---------------------------------------------------------A--------------------------------------ACAACA----------GCAA---CA---CCAGTCC-CG--------------GCA-GCAACAATAA---------C---AACAACATACTCAATCACA--ACAATC---------T------------CAA------------------------------------------T----------------ATCATTA--TCAATAACC--------------------------------------------AT----AATAA------TAGTAACAA---------TAATAATAACAA-------------CAATC-CAGCAASizeHit CountTotal NormTotal
No Reads
droFic1
AGT-GTT-AAT-GC---------T---GCTGCTGCTGCT------------------AG----TTTCGTGCCCGCC-------------------------------------------------------------GA------------------------------GGTGCGTCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAATGCCACTCA------------------------------------------------------------------------------------------------------------------------------------------GCGTTG-GACGGTG--------------CGGAGGCGCGTGCGCGT------------------------GCTGA--A-----------------TACACTGGCAACAACA-----------------------------AGGGCGGCAGCAGCAACAACAAC------------------------------AG----------------CGG-----------CAACAG------CAGCAACACTG---------------------------------------------GG--AGCAGCGATAGCAACGATAGCAGCAACAACA---GCAACA----CTAGCTG-------------------CA--------------------------------------------------------------ACAACA---------G------------TAG------------------------------------------C----------------ATTAGGA--GCAACAACG---------------------C----------------------GGAC--AATAT------CAGCAACAA---------CAATAGCTGCAA------------TATCAG-CAGCAASizeHit CountTotal NormTotal
No Reads
droEle1
GC-AACA-GCA-GCAA---------------------CA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTCTCGCATCCGCAG-CAGCAACATTCGCCTCACTCTTTGGTGAGGGTGAAGAAGGAGCCGAATGTTGGTCAGCGTCAC-----------------------TTGTCGCCGCATCACCCGCAACAGTC-------------------------------GC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CC------------------------------CACCTGCAGCACCAC------------------------------------------------C------AGCAGC------AGCAGCAGCAGC---AGC--AAC---------AGC---------------A---ACAACA----GCAGCAG-------------------CAACAACAG---------------C--------------------------------------------AGCAGCAGCATCT------------A------------------------------------------CACC------------------------AGCAGC---------------------------------------------------AACAG------CAGCAACAC---------CACCAGCAACAA------------CAGCAG-CAACCGSizeHit CountTotal NormTotal
No Reads
droRho1
GGG-CA--------------TGGCCGGAATGC---------------AGCCCCCGCC----------T-----------------------CAACGATACGCCATG---CCGGGTAATG--------------------------C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCACCACCGCAGCACCTGGCTCTGAT---GAGCAC---GC------CAGTGGGTGCTGCTTCCACCGCCGCCTGCCTCCTCCCCCT---------------------------------------------AACCGTTCCCGTGTCCCCGCTCACCCTGTCTATACCACAAGCCCATCC-----------------------------------------------------------------------------AAAC--------------------------CA-------T-----------------------------------------------C------AAGCCCAT---------------------C--AAC---------AAC---------------------AAC--------------------------------------------------------------------------A---G------CAAACACTGAACAAT----CCGACATTC------------ATTCCAATTCCAGG-CCAG-----------TACCCGCCAACTCA----------------GCCA-----------------------------------------------------------------------------------------------------------------------------CCCAASizeHit CountTotal NormTotal
No Reads
droBia1
GC-AGCA-GCG-GC-------------------------------------------------------AGCGGC---------------G-------------------------GCAGCGGCCCACCACCATGCCGC------------------------------CCATCATCTGCTGGCCGCCAATGGCATGGTGCCA----------------------C------------------------------------------------------------------------------------------------------ACCC---------------------CCTGGCCGCCCATCCGCACTT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCATGTCCCGGTGGCAATGCATC----------------------------------------------------------------------------------------------CC------------------------------CAGCTG------------------------------------CAGCAGCACCAGAAGGAGCAGC------AGC------AA------CAGCAGCAGCAGCAG-----------------------------CA---TCAGCA----GCAGCACTTGCAACA---GCAG-GAG------------------------C--------------------------------------------------AGCAGCAGCAACAGGAGCAG---------------------------------------------------------------------------------------------------------------------------------TTGCAGCTACAGCAGCAG---------CAGCAGCAGCCA------------GAGCCAACAGCAASizeHit CountTotal NormTotal
No Reads
droTak1
GC-AGCA-GCA-GC-------------------------------------------------------AGCAAC-----------------------ACCTGCC------------------------------------------------------------------------------------------------------------------------------------------------------G--------------------------------------------------------------------------------------------------------CAGCC-------------------------------AGCCCATCTGCAGTCCTCGC---AGGCCCAGTCGCACTTGACCCAGTTGGCGCAATACTATCCA------------------------------------------------------------------------------------------------------------GCCTTCCCCCAGCCCATCGCCTCCC-----------AGTACACGG------------------------CCTGC--A-----------------TGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------GCAGCAGCAA------CAGCAGCAGCAGC--------------------------------AGCAACAACA----GCAGCAGCAA---CA---GCAGGCGGCCT------ATGCGCAG-------CAGCAGCACCAGCAGGCCT--------------------------------------A------------C------------------------------------------A----------CGC--------------AGC------------------------------------------------------AGCAG------CAGCAGCAG---------GCGCAGCAGCA-------------GCGCCA-GGAGAASizeHit CountTotal NormTotal
No Reads
droEug1
GAT-CA-AC-GTGT---------T---GCTGT--------C----------------TGCCGCGATCACGCC---------------AACA--------GCCAGTGCCGTCG------------------------CAAGCAGTGTAAATACTACCACATACC------GATTGTCCTGCCGCCGGCCAAC---------------------------------------------------------------AT--------------------------------------------------------------------------------------------------------CATGGC------------GGCCATGATCACCAGTCC---------------------------------------------------------------------CA---------------------------------------------------------------------------------GTGATCAGCAGCC----------------------------------------------------GGCTGTACCGGT---------------------------------------------------------------------------------------------------------------------------------------GG----------------CCA-----------CAACAA------------------CAGCTAATCC------GGCAGC------------------AGCAGC--------------------------------AGCAG----------CAGCAGCAG---CA---ACAGCCGGCTACAACGG---------------C--------------------------------------------ACCAGCAACTT---------------------------------------------------------GATCATCATCGAGC--------------CGC------------------------------------------------------AGCAG------CAGCAACAG---------CAACAGCAGCAG------------CCGCCG-CAACAGSizeHit CountTotal NormTotal
No Reads
dm3
GGG-CA--------------TGGCCGGGATGC---------------AACCGCCGCC----------A-----------------------CAGCGATATGGCATG---CCGGGTAATG--------------------------C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCACCACCGCAGCACCTGGCTCTGAT---GAGCAC---GC------CAGTGGGTGCTGCTCCCACCGCCGCCTGCCTTCTCCCACT---------------------------------------------AACCGTTCCCGTAACCCCGCTCACCCTGTCCATACCGCAAGCCCATCC-----------------------------------------------------------------------------CAGC--------------------------CA-------T-----------------------------------------------C------AAGTTCAT---------------------C--AAC---------AAC---------------------AAC--------------------------------------------------------------------------A---G------CAAACACTGAGCAAT----CCGACATTC------------ATTCCAATTCCAGG-CCAG-----------TACCCGGCAACTCA----------------GCCA-----------------------------------------------------------------------------------------------------------------------------CCCAASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTGGCTCTGAT---GAGCAC---GC------CA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------CAAACACTGAGCAAT----CCGACATT...............................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCCTGCCTTCTCCCACT---------------------------------------------AAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACCTGGCTCTGAT---GAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGCTCACCCTGTCCATACCGCAAGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC------CAGTGGGTGCTGCTCCCACCGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACATTC------------ATTCCAATTCCAGG-C..................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTGGGTGCTGCTCCCACCG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................ATG--------------------------C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCACCACCGCAGCA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAT---GAGCAC---GC------CAGTGGGTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................TGC---------------AACCGCCGCC----------A-----------------------CAGCGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCATACCGCAAGCCC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAT---GAGCAC---GC------CAGTGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
droSim2
GC-AACA-GCA-GCAG---------------------CATCTTCAGCAACAGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAACACCATC--ATCCGCATCATCATCTGAAGCTGGACAACAGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAACCACCCAC------CGACCGCAGCAGCAGCCGCAGCTGCCGT------------------AGCAG------TAGCAGC--------------------------------AACAA----------CTGCAGCAA---CA---GCAGCCG-CA--------------GCAACCAACAACAG---------CGCT--------------------------------------T------------C------------------------------------------CTTC------------------------AGCAGCA--------------------------------------------ACA-GCAGCAG------TAGCAATAG---------CAACAACAGCAA------------TCACTT-GGACAASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAA------------TCACTT-GGAC..1912.00200200000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATCATCTGAAGCTGGACAACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAACCACCCAC------CGAC....................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCATCATCTGAAGCTG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
....................................................CAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCAACACCATC--..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1981.00800000800000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACACCATC--ATCCGCATCATCATCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100100000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCGT------------------AGCAG------TAGCAGC--------------------------------AACAA----------C........................................................................................................................................................................................................................................................................................................................2311.00100000000100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAACC....................................................................................................................................................................................................................................................................................................................................................................................................................................................16140.07100000000001000000
droSec2
GC-AACA-GCA-GCAG---------------------CATCTTCAGCAACAGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCCACACCATC--ATCCGCATCATCATCTGAAGCTGGACAACAGCAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAACAACCACCCAC------CGACCGCAGCAGCAGCCGCAGCTGCCGT------------------AGCAG------TAGCAGC--------------------------------AACAA----------CTGCAGCAA---CA---GCAGCCG-CA--------------GCAACCAACAACAG---------CGCT--------------------------------------T------------C------------------------------------------C----------TTC--------------AGC------------------------------------------------------AGCAG------TAGCAATAG---------CAACAACAGCAA------------TCACTT-GGACAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAG---------CAACAACAGCAA------------TCACTT-GGA...2611.0011000
droYak3
GAT-CA-GC-AG-A------TGAT---GATGC---------------AGC-------------AGC------------------------A--------GCA--------------------------------------------------------------------------------------------------------------------------------------GAATCTGCACACGCAG-C---------------------------------------------------------------------------ACCAGCACAAT---------------------------------------------------------------CTGCAGGCGCAGCATCAGAGCCACTCGCA---------GTTGCAGCAACACAGTC--AGCAGCA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAGTCAGCAGCAGCAACAGCAGC------------------------------AG----------------CAG-----------CAACAA---------------------------C------AGCAAC------AGCAG------CAGCAGC--------AGCAACAGC---------------A---ACAGCA----GCAGCAG-------------------CAACAACAG---------------C--------------------------------------------AACAGCAGCAA------------------------------------------------------------C------------------------AGCAGC---------------------------------------------------AACAG------CAGCAACAA---------CAACAGCAGCAACAGCAGCAGTTACAGCTG-CAGCAASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---------------A---ACAGCA----GCAGCAG-------------------CAACAACAG---------------C--------------------------------------------...........................................................................................................................................................................................................................27201.2024000000000024
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGC------------------------------AG----------------CAG-----------CAACAA---------------------------C------AGC...................................................................................................................................................................................................................................................................................................................................................................................................27201.2024000000000024
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CCACTCGCA---------GTTGCAGCAACACAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................CA---------GTTGCAGCAACACAGTC--AG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGAGCCACTCGCA---------GTTGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAACAGCAGCAGTT..............2230.33100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA---------------------------C------AGCAAC------AGCAG------CAGCAGC--------AGC.............................................................................................................................................................................................................................................................................................................................................................2740.25100100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---------------------------------------------------AACAG------CAGCAACAA---------CAACAGCA.............................25120.08101000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAA---------CAACAGCAGCAACAGC.....................22180.06100100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-----------CAACAA---------------------------C------AGCAAC------AGCAG------C..............................................................................................................................................................................................................................................................................................................................................................................21200.05100100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AC------AGCAG------CAGCAGC--------AGCA............................................................................................................................................................................................................................................................................................................................................................18200.05100010000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................C---------------A---ACAGCA----GCAGCAG-------------------CAACA...........................................................................................................................................................................................................................................................................................20200.05101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGC--------AGCAACAGC---------------A---ACAGCA----GCAGCA....................................................................................................................................................................................................................................................................................................................27200.05101000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGC------------------------------AG----------------CAG-----------CAACAA---------------------------.............................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAG---------------C--------------------------------------------AACAGCAGCA.................................................................................................................................................................................................................18200.05100010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-------------------CAACAACAG---------------C--------------------------------------------AACAGCAGC..................................................................................................................................................................................................................21200.05100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAG------CAGCAACAA---------CAACAGC..............................20200.05100100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------CAGCAGC--------AGCAACAGC---------------A---AC..................................................................................................................................................................................................................................................................................................................................20200.05101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAC------AGCAG------CAGCAGC--------AGCA............................................................................................................................................................................................................................................................................................................................................................21200.05100001000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAGCAACAGCAGC------------------------------AG----------------CAG-----------CA............................................................................................................................................................................................................................................................................................................................................................................................................................................24200.05100001000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAA---------------------------C------AGCAAC------AGCAG------CA.............................................................................................................................................................................................................................................................................................................................................................................18200.05100010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAA------------------------------------------------------------C------------------------AGCAGC---------------------------------------------------AACAG------CA.....................................................20200.05100100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---------------------------------------------------AACAG------CAGCAACAA---------CAA..................................20200.05101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC--------AGCAACAGC---------------A---ACAGCA----GC........................................................................................................................................................................................................................................................................................................................21200.05101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAG---------------C--------------------------------------------AACAGCAGCAA------------------------------------------------------------C------------------------AG.........................................................................................................................20200.05101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAACAGCAGCA.................20200.05100010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA------------------------------------------------------------C------------------------AGCAGC---------------------------------------------------AACAG------CAGC...................................................18200.05100010000000
droEre2
TGCAGCA-GCC-AC-------------------------------------------------------ATCGTCCCAGCGTCACCCAGCA-------------------------GCA--------------------------ACTGCCC-TCCACTTCCTCGCAGTCCATCTTCAACAAGC-----------TGGT-------------------GCAA---C------------------------------------------------------------------------------------------------------A---------------------------------GTC---GCAGTTCTATATCAACCACAATCAGCAG---------------------------------------------------------------------TA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCACAGCAGC---------------------------------------------------------------------------------------------------------------------------AA------CATCACCAGCAGCAG-----------------------------CA---TCAACA----GCAGCACCAGCATCAGTATCAG-CAG------------------------CA---------------------G--------------------------CAGCA---GCATCAGCATCAG------------------------------------------CACCAGCATCAGCC--------------TGC---A--------------------------------------------AC-----GCAG------CAGCATCAG---------CATCAACAGGCA------------ACGCAG-CAGCAASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTATCAG-CAG------------------------CA---------------------G--------------------------CAGCA---..............................................................................................................................................................................................................1930.3310000100
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCAG-CAG------------------------CA---------------------G--------------------------CAGCA---GCA...........................................................................................................................................................................................................2040.2510000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G------------------------CA---------------------G--------------------------CAGCA---GCATCAGCA.....................................................................................................................................................................................................18200.1530000030
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTATCAG-CAG------------------------CA---------------------G--------------------------CAGCC---..............................................................................................................................................................................................................1990.1110001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-CAG------------------------CA---------------------G--------------------------CAGCA---GCATCAGCA.....................................................................................................................................................................................................22200.1020000020
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAG-CAG------------------------CA---------------------G--------------------------CAGCA---GCATCAGCA.....................................................................................................................................................................................................23200.1020000200
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-CAG------------------------CA---------------------G--------------------------CAGCA---GCATCA........................................................................................................................................................................................................19200.0511000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------------------------CAGCA---GCATCAGCATCAG------------------------------------------CA.....................................................................................................................................................21200.0510000100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------G--------------------------CAGCA---GCATCAGCATCAG------------------------------------------.......................................................................................................................................................20200.0510001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G-CAG------------------------CA---------------------G--------------------------CAGCA---GCATCAGC......................................................................................................................................................................................................20200.0510000100
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-CAG------------------------CA---------------------G--------------------------CAGCA---GCATCAG.......................................................................................................................................................................................................20200.0510001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G--------------------------CAGCA---GCATCAGCATCAG------------------------------------------C......................................................................................................................................................20200.0511000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................A---------------------G--------------------------CAGCA---GCATCAGCATCAG------------------------------------------C......................................................................................................................................................21200.0510010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG-CAG------------------------CA---------------------G--------------------------CAGCA---GCATCAGC......................................................................................................................................................................................................21200.0510000010

Generated: 05/17/2015 at 10:05 PM