ID:

dgr_15

 Coordinate:

scaffold_15245:18189077-18189134 +

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

intron

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-33.8 -32.8 -32.8

Flybase annnotation

intron [Dgri\GH22152-in]; utr3 [utr3_minus_2846]

No Repeatable elements found

Sense Strand Reads

CTTTTAAAGCATATTAAATTCCGAGTGTGGTATTTCTGTGCATTTTGGGCGTGTGATTTGTGGCAAAGTGATGAGCTTGATTCCATCCCCTTGTTGCAAACCTCACGCCGAAGGTGGCGCATCTAAGCAACAATATTAATATACAAGTTTCCACTATT

***********************************.((((((((((.((((((...((((((((((...((((..........))))...))))))))))...)))))).))))).))))).************************************ 		Read size # Mismatch Hit Count Total Norm Total M041

female body

 V109

male body
......................................................................................CCCCTTGTTGCAAACCTCACG................................................... 21 0 1 720.00 720 699 21
......................................................................................CCCCTTGTTGCAAACCTCACGC.................................................. 22 0 1 697.00 697 690 7
.......................................................................................CCCTTGTTGCAAACCTCACG................................................... 20 0 1 63.00 63 62 1
......................................................................................CCCCTTGTTGCAAACCTCAC.................................................... 20 0 1 57.00 57 55 2
.......................................................................................CCCTTGTTGCAAACCTCACGC.................................................. 21 0 1 54.00 54 54 0
......................................................................................CCCCTTGTTGCAAACCTCACGCT................................................. 23 1 1 51.00 51 51 0
..................................................GTGTGATTTGTGGCAAAGTGAT...................................................................................... 22 0 1 38.00 38 16 22
......................................................................................CCCCTTGTTGCAAACCTCACGT.................................................. 22 1 1 28.00 28 19 9
..................................................GTGTGATTTGTGGCAAAGTGA....................................................................................... 21 0 1 12.00 12 2 10
......................................................................................CCCCTTGTTGCAAACCTCACGCTT................................................ 24 2 1 9.00 9 9 0
......................................................................................CCCCTTGTTGCAAACCTCA..................................................... 19 0 1 9.00 9 8 1
..................................................GTGTGATTTGTGGCAAAGTGATT..................................................................................... 23 1 1 6.00 6 3 3
..........................................................................................TTGTTGCAAACCTCACGC.................................................. 18 0 1 6.00 6 6 0
........................................................................................CCTTGTTGCAAACCTCACGC.................................................. 20 0 1 6.00 6 6 0
...................................................TGTGATTTGTGGCAAAGTGAT...................................................................................... 21 0 1 5.00 5 4 1
......................................................................................CCCCTTGTTGCAAACCTCACGTT................................................. 23 2 1 4.00 4 4 0
.....................................................................................TCCCCTTGTTGCAAACCTCACG................................................... 22 0 1 4.00 4 4 0
.....................................................................................CCCCCTTGTTGCAAACCTCACGC.................................................. 23 1 1 3.00 3 3 0
...................................................TGTGATTTGTGGCAAAGTGATG..................................................................................... 22 0 1 3.00 3 1 2
.........................................................................................CTTGTTGCAAACCTCACG................................................... 18 0 1 3.00 3 3 0
.......................................................................................CCCTTGTTGCAAACCTCAC.................................................... 19 0 1 3.00 3 3 0
.......................................................................................CCCTTGTTGCAAACCTCACGCT................................................. 22 1 1 3.00 3 3 0
.....................................................................................TCCCCTTGTTGCAAACCTCACGC.................................................. 23 0 1 3.00 3 3 0
.....................................................................................ACCCCTTGTTGCAAACCTCACGC.................................................. 23 1 1 3.00 3 3 0
.....................................................................................GCCCCTTGTTGCAAACCTCACGC.................................................. 23 1 1 2.00 2 2 0
.....................................................................................CCCCCTTGTTGCAAACCTCACG................................................... 22 1 1 2.00 2 2 0
......................................................................................CCCCTTGTTGCAAACCTCACGCA................................................. 23 1 1 2.00 2 2 0
......................................................................................CCCCTTGTTGCAAACCTCACGCTTT............................................... 25 3 1 2.00 2 2 0
.....................................................................................ACCCCTTGTTGCAAACCTCACG................................................... 22 1 1 2.00 2 2 0
......................................................................................CCCCTTGTTGCAAACCTCACT................................................... 21 1 1 2.00 2 2 0
.........................................................................................CTTGTTGCAAACCTCACGC.................................................. 19 0 1 2.00 2 2 0
........................................................................................CCTTGTTGCAAACCTCACG................................................... 19 0 1 2.00 2 2 0
......................................................................................CCCCTTGTTGCAGACCTCACGC.................................................. 22 1 1 1.00 1 1 0
...............................ATTTCTGTGCATTTTGGGC............................................................................................................ 19 0 1 1.00 1 1 0
......................................................................................CCCCTTGCTGCAAACCTCACG................................................... 21 1 1 1.00 1 1 0
......................................................................................CCCCTTGTTGCAAAACTCACGC.................................................. 22 1 1 1.00 1 1 0
...................................................................................ATACCCCTTGTTGCAAACCTCACGC.................................................. 25 3 1 1.00 1 1 0
......................................................................................CCCCTCGTTGCAAACCTCACG................................................... 21 1 1 1.00 1 1 0
......................................................................................CCTCTTGTTGCAAACCTCACG................................................... 21 1 1 1.00 1 1 0
.......................................................................................CCCTTGTTGCAAACCTCACGCGA................................................ 23 2 1 1.00 1 1 0
.......................................................................................CCCTTGTTGCAAACCTCACGCA................................................. 22 1 1 1.00 1 1 0
....................................................................................GACCCCTTGTTGCAAACCTCAC.................................................... 22 2 1 1.00 1 1 0
.......................................................................................CCCTTGTTGCAAACCTCACGT.................................................. 21 1 1 1.00 1 1 0
......................................................................................CCCCTTGTTGCAAACCCCACGC.................................................. 22 1 1 1.00 1 1 0
...................................................TGTGATTTGTGGCAAAGTGA....................................................................................... 20 0 1 1.00 1 0 1
.....................................................................................TCCCCTTGTTGCAAACCTCACGT.................................................. 23 1 1 1.00 1 1 0
..................................................GTGTGATTTGTGGCAAAGTGATAAA................................................................................... 25 2 1 1.00 1 0 1
......................................................................................CCCCTTGTTGCAAACCTCTCG................................................... 21 1 1 1.00 1 1 0
...................................................................................AGTCCCCTTGTTGCAAACCTCACGC.................................................. 25 2 1 1.00 1 1 0
.......................................................................................CCCTTGTTGCAAACCTCACGA.................................................. 21 1 1 1.00 1 1 0
......................................................................................CCCCTTGTTGCAAACCTCACGCATG............................................... 25 3 1 1.00 1 1 0
......................................................................................CCCCTTGTTGCGAACCTCACGC.................................................. 22 1 1 1.00 1 1 0
...................................................................................GTACCCCTTGTTGCAAACCTCACG................................................... 24 3 1 1.00 1 1 0
...................................................................................CCCCCCCTTGTTGCAAACCTCACG................................................... 24 2 1 1.00 1 1 0
......................................................................................CCCCTTGTTGCAAACCTTACGC.................................................. 22 1 1 1.00 1 1 0
....................................................................................CACCCCTTGTTGCAAACCTCACGC.................................................. 24 2 1 1.00 1 1 0
.......................................................................................CCCTTGTTGAAAACCTCACGC.................................................. 21 1 1 1.00 1 1 0
......................................................................................CCCCTTGTTGCAAGCCTCACG................................................... 21 1 1 1.00 1 1 0
...................................................................................GTTCCCCTTGTTGCAAACCTCACGC.................................................. 25 2 1 1.00 1 1 0
......................................................................................CCCCTTGTTGTAAACCTCACGC.................................................. 22 1 1 1.00 1 1 0
..................................................GTGTGATTTGTGGCAAAGTGATTT.................................................................................... 24 2 1 1.00 1 0 1
......................................................................................CCTCTTGTTGCAAACCTCACGC.................................................. 22 1 1 1.00 1 1 0
..................................................GTGTGATTTGTGGCAAAGTGATA..................................................................................... 23 1 1 1.00 1 1 0
...................................................TGTGATTTGTGGCAAAGTGATT..................................................................................... 22 1 1 1.00 1 1 0
..................................................GTGTGATTTGTAGCAAAGTGA....................................................................................... 21 1 1 1.00 1 1 0
..................................................GTGTGATTTGTGGCAAAGT......................................................................................... 19 0 1 1.00 1 1 0
......................................................................................CCCCTTTTTGCAAACCTCACGC.................................................. 22 1 1 1.00 1 1 0
..................................................GTGTGATTTGTGGCAAAGTG........................................................................................ 20 0 1 1.00 1 0 1
......................................................................................CACCTTGTTGCAAACCTCACGC.................................................. 22 1 1 1.00 1 1 0
.......................................................................................CCCCTTTTGCAAACCTCACG................................................... 20 2 1 1.00 1 1 0
..................................................TTGTGATTTGTGGCAAAGTGAT...................................................................................... 22 1 1 1.00 1 0 1
..................................................GTGCGATTTGTGGCAAAGTGAT...................................................................................... 22 1 1 1.00 1 0 1
....................................................................................AACCCCTTGTTGCAAACCTCACGC.................................................. 24 1 1 1.00 1 1 0
.......................................................................................CCCTTGTTGCAAACCTCACT................................................... 20 1 1 1.00 1 1 0
......................................................................................CCCCTTGTTGCAGACCTCACG................................................... 21 1 1 1.00 1 1 0
...................................................................................TATCCCCTTGTTGCAAACCTCACG................................................... 24 1 1 1.00 1 1 0
.......................................................................................CCCTTGCTGCAAACCTCACGC.................................................. 21 1 1 1.00 1 1 0
.................................................................................CGTATCCCCTTGTTGCAAACCTCACGC.................................................. 27 3 1 1.00 1 1 0
......................................................................................CCCCTTGTTGCAAACCTCACGCTTG............................................... 25 3 1 1.00 1 1 0
.......................................................................................TCCTTGTTGCAAACCTCACG................................................... 20 1 1 1.00 1 1 0
..................................................GGGTGATTTGTGGCAAAGTGAT...................................................................................... 22 1 1 1.00 1 0 1
................................TTTCTGTGCATTTTGGGC............................................................................................................ 18 0 2 0.50 1 1 0
......................................................................................AACGTTGTTGCAAACCTCACG................................................... 21 3 5 0.20 1 1 0
.....................................................................................................GTCACGCCGGAGGTCGCG....................................... 18 3 16 0.06 1 0 1

Anti-sense strand reads

GAAAATTTCGTATAATTTAAGGCTCACACCATAAAGACACGTAAAACCCGCACACTAAACACCGTTTCACTACTCGAACTAAGGTAGGGGAACAACGTTTGGAGTGCGGCTTCCACCGCGTAGATTCGTTGTTATAATTATATGTTCAAAGGTGATAA

************************************.((((((((((.((((((...((((((((((...((((..........))))...))))))))))...)))))).))))).))))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total M041

female body
..............................................................................................................................CGTTGTTGAAATTATATG.............. 18 2 20 3.10 62 62
..................................................CAGACTAAACACCGTTTCATC....................................................................................... 21 3 7 0.14 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droGri2 scaffold_15245:18189027-18189184 + dgr_15 confident CT---T-TTAAAGC---ATAT-----TAAAT---TCCGAGT---------G----TG-----------G-------TA---TTTCTGTGCATTTTGGGCGTGTGATTTGTGGCAAAGTGATGAGC--TTGATTCCATCCCCTTGTTGCAAACCTCACGCC--GAAGGTGGC-GCATC---TA--AGCAAC---------------AA---TATTAA-TATACA--------------AGTT----T-----------------------CCACTATT
droVir3 scaffold_12875:19840348-19840499 + dvi-mir-988 Known_mirbase CA---C-----AGA---TCAT---G-----T---CCAGAGT---------G----TG---------TAA-------TA---TATCTGCGCATTTTGGGCGTGTGATTTGTGGCAAAGTGATGAGC-TTGGATTCCATCCCCTTGTTGCAAACCTCACGCC--AAAGGTGGC-GCATT---TA--ACCAGC---------------AA---TATAAA-GATTCATGTGTA-------------------------------------------AACCA
droMoj3 scaffold_6496:6364074-6364233 - dmo_36 confident TG---G-ATAAAGA---CTAT---T-----C-----GGAGT-----GT-TA----TA-----------TCTATCATGTG--TATTTGCGCATTTTGGTCGTGTGATTTGTGGCAAAGTGATGAGC-TATGATTCCATCCCCTTGTTGCAAACCTCACGCT--GAAGGTGAC-GCATA---GC--AGCAAC---------------AA---TTGAAA-GATA------------------------TT----------------------CGATTAAA
droWil2 scf2_1100000004954:3254346-3254509 + dwi_37 confident AAATAT-CTTAAGT---ACAT---T-----T----------GTTTAGTTAA----AA-----------C-------GA---ATTGTGGGCATTTCGGGCGTGTGATTTGTAGCAAAGTGATATGTACTTGAT--AATCCCCTTGTTGCAAACCTCACGCCGGAAAGATGTC-TCC----AA---------ATACA---TCAGTCG-ATA---TC-C------AG-------------AATCAGTTT-----------------------GCAATTTT
dp5 3:405610-405767 - dps-mir-988 Known_mirbase GG---A-TAACTGG---GTAT-----CCAGGAATCCA----------------------------------------G---ACTGTGGACATTTTGGGTGTGTGATTTGTGGCAAAGTGATATGCATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGTTGAA-TCCCA---C-AC------CTACACTCTCATATA-ATGA---T-C------ATG--------------TGAACG---AA---------------A------ACAAA
droPer2 scaffold_2:590048-590208 - dpe_339 confident CC---C-GGATAACTGGGTAT-----CCAGGAATCCA----------------------------------------G---ACTGTGGACATTTTGGGTGTGTGATTTGTGGCAAAGTGATATGCATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGTTGAA-TCCCA---C-AC------CTACACTCTCAGATA-ATGA---T-C------ATG--------------TGAACG---AA---------------A------ACAAA
droAna3 scaffold_13266:2579688-2579832 + dan_27 confident TA---A-TGGAATC---A--G---T-----A--------------AGTGGA----AA-----------G-------GT---GTACTGGACATTTTGGGTGTGTGATTTGTGGCAAAGTGATAGGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--CAAGGTGCT-TTCCA-A-C---GGCAACATA--TCAGC---------------AAG-----------------G---AA----G-------------------------ACTAAG
droBip1 scf7180000396759:1640701-1640850 + CT---C-TAAGGGT----------------T----------GAATAGTGAA----CA-----------G-------GTTTTTTACTGGACATTTTGGGTGTGTGATTTGTGGCAATGTGATAGGTATTTGAT--AATCCCCTTGTTGCAAACCTCACGCC--AAAGATGAT-ATCCATAT----AGCAAC---------------GT---TATT-AAG--------------------GTC----A-----------------------CCAAAGTG
droKik1 scf7180000302367:405223-405367 + CTG-AG-CTGAA-------AT---C-----T------------------------TG--GCATTTGTGACTAT--------CAAGTGGGCATTTTGGGTGTGTGATTTGTGGCAAAGTGATATGTATTTGAT--GATCCCCTTGTTGCAAACCTCACGCC--AAAGATGGAATCCTA---TC--CACA-------T---C---------------AAG-----------------G---AA----GTG-----------------------CATCCA
droFic1 scf7180000453809:442524-442677 - GG---T-GTAGGGG---ATAT-----TAAAG--------------------------------------------------TATCTGGGCGTTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGGA-TCCCA---C-A--------TA--ACATCAAATG-AAATAAGCTG------A--------------AGTGATTA---AA---------------AATT---CTATA
droEle1 scf7180000491214:3580557-3580714 - CT---G-TTTAAGA---TCAG---T-----T---T-------------GCA--CACGAGGATTTT---C-------CG---GTTCAGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGAG-ACCTATGA----AACAAC---------------AT---TAGTTA-G-------------------AGTG----AT----------------------GTATTGGT
droRho1 scf7180000779932:485531-485689 - TT---T-CTAAAGA---ATATCAGT-----G------------------AACAA-ATTGGATTGT---C-------CG---ACTCTGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGAG-TCCCACAA----AACAAC---------------AT---TAATTA------A--------------AGTG----G-----------------------TAAATGTT
droBia1 scf7180000302292:862253-862411 - AT---T-GAAAAAA---ATGT---CTTCAAC-------------------------------TCT---T-------CA---GTACTGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGAG-TCCGT---TA--AACA-------TCACCAAACG-AATA---T-C------AA-------------AGGG-ACGCT-AT---------------------ATCAAA
droTak1 scf7180000415260:195631-195794 + TA---T-CTCAATA---GGAT---T-----T----------GAATAAA-TA----TA-----------G-------CA---GTTCAGGACATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGAA-TCCGA---AA--TACA-------ACGCCAAATG-ATAT---T-C------AT-------------AGTGACTA---TA---------------AATT---GTGAC
droEug1 scf7180000409462:417377-417529 + TT---T-ATAAATC---CGAA-----TAAAT---T----------------------------CC---T-------CG---GCAATGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--GAAGATGAG-TTCCA---TA--AACAAC-------CC--G---AA---TAGGAA-AAGG--------------CAAGTG-------AT---------------------CATATT
dm3 chr2R:8046354-8046494 - dme-mir-988 Known_mirbase GT---TTCAAAAGA---ACAT---A-----G---T-------------TGA----CG-----------G-------CG---GTACCGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGAT-CTG--CGAA---------ATACA----CAGT------------------GGTATGGA-------------------------------------------AAAAA
droSim2 2r:8750767-8750906 - dsi-mir-988 Known_mirbase CT---A-CTAGAGA---ACAT---T-----T---T-------------TGA----TG-----------G-------CG---GTACCGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGAT-CTG--AGAA---------ATACA----CAGT------------------GATATGAA-------------------------------------------ACAAA
droSec2 scaffold_1:5591414-5591551 - dse_24 confident CT---G-CTAGAGA---ACAT---T-----T---T-------------TGA----TG-----------G-------CG---GTACCGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGAT-CTG--CGAA---------ATACA----CAGT------------------GTTTTGGA-------------------------------------------A--CA
droYak3 2R:8904835-8904985 + dya_25 confident CT---T-CTAAATA---ACAT---T-----T---T-------------TCA----TG-----------G-------CG---TTACTGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGGTGAC-CTG--CGAA---------ATACA----CAGG------------------GATATGTAAAAAAGAC---A----GTGC-------------------------TTT
droEre2 scaffold_4845:17747734-17747907 + der_31 confident TC---A-GAAAAAC---A--T---A-----T---T-------------TGA----TG-----------A-------CG---GTACCGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--GAAGGTGAC-CTG--CGAA---------ATACA----CAGT------------------GTTATGGAAAAAAGAA---A----GTGCTCTTCAAGGGATATAGAATCCCTTTAAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droGri2
CT---T-TTAAAGC---ATAT-----TAAAT---TCCGAGT---------G----TG-----------G-------TA---TTTCTGTGCATTTTGGGCGTGTGATTTGTGGCAAAGTGATGAGC--TTGATTCCATCCCCTTGTTGCAAACCTCACGCC--GAAGGTGGC-GCATC---TA--AGCAAC---------------AA---TATTAA-TATACA--------------AGTT----T-----------------------CCACTATTSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.........................................................................................................................................CCCCTTGTTGCAAACCTCACG.......................................................................................................................211720.0072069921
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGC......................................................................................................................221697.006976907
..........................................................................................................................................CCCTTGTTGCAAACCTCACG.......................................................................................................................20163.0063621
.........................................................................................................................................CCCCTTGTTGCAAACCTCAC........................................................................................................................20157.0057552
..........................................................................................................................................CCCTTGTTGCAAACCTCACGC......................................................................................................................21154.0054540
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--...................................................................................................................23151.0051510
...................................................................................................GTGTGATTTGTGGCAAAGTGAT............................................................................................................................................................22138.00381622
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGT......................................................................................................................22128.0028199
...................................................................................................GTGTGATTTGTGGCAAAGTGA.............................................................................................................................................................21112.0012210
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--T..................................................................................................................2419.00990
.........................................................................................................................................CCCCTTGTTGCAAACCTCA.........................................................................................................................1919.00981
...................................................................................................GTGTGATTTGTGGCAAAGTGATT...........................................................................................................................................................2316.00633
.............................................................................................................................................TTGTTGCAAACCTCACGC......................................................................................................................1816.00660
...........................................................................................................................................CCTTGTTGCAAACCTCACGC......................................................................................................................2016.00660
....................................................................................................TGTGATTTGTGGCAAAGTGAT............................................................................................................................................................2115.00541
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGTT--...................................................................................................................2314.00440
........................................................................................................................................TCCCCTTGTTGCAAACCTCACG.......................................................................................................................2214.00440
....................................................................................................TGTGATTTGTGGCAAAGTGATG...........................................................................................................................................................2213.00312
............................................................................................................................................CTTGTTGCAAACCTCACG.......................................................................................................................1813.00330
..........................................................................................................................................CCCTTGTTGCAAACCTCAC........................................................................................................................1913.00330
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCT--...................................................................................................................2213.00330
........................................................................................................................................TCCCCTTGTTGCAAACCTCACGC......................................................................................................................2313.00330
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--...................................................................................................................2312.00220
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--TT.................................................................................................................2512.00220
.........................................................................................................................................CCCCTTGTTGCAAACCTCACT.......................................................................................................................2112.00220
............................................................................................................................................CTTGTTGCAAACCTCACGC......................................................................................................................1912.00220
...........................................................................................................................................CCTTGTTGCAAACCTCACG.......................................................................................................................1912.00220
.............................................................................A---TTTCTGTGCATTTTGGGC..................................................................................................................................................................................1911.00110
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCG--A..................................................................................................................2311.00110
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCA--...................................................................................................................2211.00110
..........................................................................................................................................CCCTTGTTGCAAACCTCACGT......................................................................................................................2111.00110
....................................................................................................TGTGATTTGTGGCAAAGTGA.............................................................................................................................................................2011.00101
........................................................................................................................................TCCCCTTGTTGCAAACCTCACGT......................................................................................................................2311.00110
..........................................................................................................................................CCCTTGTTGCAAACCTCACGA......................................................................................................................2111.00110
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--TG.................................................................................................................2511.00110
...................................................................................................GTGTGATTTGTGGCAAAGTGATTT..........................................................................................................................................................2411.00101
...................................................................................................GTGTGATTTGTGGCAAAGTGATA...........................................................................................................................................................2311.00110
....................................................................................................TGTGATTTGTGGCAAAGTGATT...........................................................................................................................................................2211.00110
...................................................................................................GTGTGATTTGTGGCAAAGT...............................................................................................................................................................1911.00110
...................................................................................................GTGTGATTTGTGGCAAAGTG..............................................................................................................................................................2011.00101
..........................................................................................................................................CCCTTGTTGCAAACCTCACT.......................................................................................................................2011.00110
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--TG.................................................................................................................2511.00110
.................................................................................TTTCTGTGCATTTTGGGC..................................................................................................................................................................................1820.50110
droVir3
CA---C-----AGA---TCAT---G-----T---CCAGAGT---------G----TG---------TAA-------TA---TATCTGCGCATTTTGGGCGTGTGATTTGTGGCAAAGTGATGAGC-TTGGATTCCATCCCCTTGTTGCAAACCTCACGCC--AAAGGTGGC-GCATT---TA--ACCAGC---------------AA---TATAAA-GATTCATGTGTA-------------------------------------------AACCASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGC......................................................................................................................22113847.0013847461616835131583353221758115714824926515327507062124104112173152109117541197543706438561183937933127714152026184320939544912534368117158765832033314914925329646213170121169
.........................................................................................................................................CCCCTTGTTGCAAACCTCACG.......................................................................................................................21111493.0011493298849133928442435127619195471868726719958811301021921261081701171741738616810465115851169915364004001213023234121135120257731365101126801591361089513410181323281211217
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGT......................................................................................................................221881.008810211618461131253110619641792251077510181929101491382415141115832002000110000001000001082200521552653756335
.........................................................................................................................................CCCCTTGTTGCAAACCTCAC........................................................................................................................201845.0084518403510430100528210515601333119310291669591278481100000001000001002116516041820361264753581118
...................................................................................................GTGTGATTTGTGGCAAAGTGAT............................................................................................................................................................221778.0077805706222244211610024551213412121513202925161015241064103000013001011100000171350019181099414023282927746610
..........................................................................................................................................CCCTTGTTGCAAACCTCACGC......................................................................................................................211693.00693006396010000002031020000330123300011000100000000000000000000000022900001003101002
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--...................................................................................................................231532.00532451478461000001014721923596451161011454165382701011102212121100384320151945410521104453610
..........................................................................................................................................CCCTTGTTGCAAACCTCACG.......................................................................................................................201441.00441003964000000000110101000401022510210300040000000000000000000011100310002001000101
...................................................................................................GTGTGATTTGTGGCAAAGTGA.............................................................................................................................................................211386.0038601332615201281010013415204027877991441010000107000000000010000000032746037543121122134734411
....................................................................................................TGTGATTTGTGGCAAAGTGATG...........................................................................................................................................................221325.0032500372524030015621040050454296510245321453200000000002000000011291700111211421100016972730
...................................................................................................GTGTGATTTGTGGCAAAGTGATC...........................................................................................................................................................231324.0032451519367500000010002001402212221911718030000290000112001110000000032901000027191420272000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--...................................................................................................................231241.00241323244000000001000000021100020002504000110001110014222231000210000010022211019142404110
.................................................................................TATCTGCGCATTTTGGGC..................................................................................................................................................................................181213.00213962500000000000000100000011012203001201220000000000000000000010000305302651328700000
.............................................................................A---TATCTGCGCATTTTGGGC..................................................................................................................................................................................191182.0018243062000000001000001010025332120100111321000000000000000000014102052525146917840042
...................................................................................................GTGTGATTTGTGGCAAAGTGATT...........................................................................................................................................................231152.0015200911020001011011100100322272203030122220001221010113001000007036031714113131111021
...................................................................................................GTGTGATTTGTGGCAAAGTGATA...........................................................................................................................................................231134.0013420702100010000100100000003330200101001510000001010110010001305000020139716111740042
...................................................................................................GTGTGATTTGTGGCAAAGTG..............................................................................................................................................................201134.001340128111300010002102005013001128260600000100000000001000000000132900000340402000010
....................................................................................................TGTGATTTGTGGCAAAGTGAT............................................................................................................................................................211127.00127008104300300010221101015021135450000120200000000000000000001390116211001000904911
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--...................................................................................................................231122.00122104716000000011100000130114100000020023100110000000010020000122004101000103036025
.........................................................................................................................................CCCCTTGTTGCAAACCTCA.........................................................................................................................19186.008601193000100005021000032021210241523001030000000000000112000031000020031201002111
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--T..................................................................................................................24184.0084002122000000000001010002000002300100010101010000000110001000110001000204405402000
............................................................................................................................................CTTGTTGCAAACCTCACGC......................................................................................................................19178.007800655000000010001000000000000000111100010000000000000000000000000010000000000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--T..................................................................................................................24175.0075000200000000000000000000000000110100000002220310100302010020000000001297431500100
.............................................................................................................................................TTGTTGCAAACCTCACGC......................................................................................................................18173.007300534000000000020010002000010010000000000000000000000000000000000000013023000000
...........................................................................................................................................CCTTGTTGCAAACCTCACGC......................................................................................................................20170.007000604000000000000000100000100000000101001000000000000000000000000000001000000000
........................................................................................................................................TCCCCTTGTTGCAAACCTCACG.......................................................................................................................22162.006200256010000000010000200001001400100200100000000000000000000021100000020030104021
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGA......................................................................................................................22161.006100249000000000000000000000000000000001200000000000000000000000002102000000005735
....................................................................................................TGTGATTTGTGGCAAAGTGA.............................................................................................................................................................20150.005000100110100001000100000000000132200001002000000000000000000008400013100000020014
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--A..................................................................................................................24145.00450072000000000000000000000000000000000100010001010011000000100000021055030503311
............................................................................................................................................CTTGTTGCAAACCTCACG.......................................................................................................................18142.004200331000000000000100100001110010000000010000000000000000000000000010000000000000
..........................................................................................................................................CCCTTGTTGCAAACCTCAC........................................................................................................................19140.004000380000000000000000010010000000000000000000000000000000000000000000000000000000
........................................................................................................................................TCCCCTTGTTGCAAACCTCACGC......................................................................................................................23137.003700244000000000010000000000001010000000020000000000000000000001000000100000001010
...................................................................................................GTGTGATTTGTGGCAAAG................................................................................................................................................................18136.00360010001000000000000000001010001001000000000000100000010000001000001057412700000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACA.......................................................................................................................21135.003500141010000002101000000000001000000001010010000000000000000000000110000000004212
.........................................................................................................................................CCCCTTGTTGCAAACCTCACC.......................................................................................................................21133.003311202000000000001000000010000001000000001000000000001000010000000010001000000100
...........................................................................................................................................CCTTGTTGCAAACCTCACG.......................................................................................................................19129.002900241000000000010000100000000000110000000000000000000000000000000000000000000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCAA........................................................................................................................20128.002800121000000003000000000000010000013000111000000000000000000000000010000000002100
....................................................................................................TGTGATTTGTGGCAAAGTGATA...........................................................................................................................................................22126.00260000000000000200000000001001000000000000000000000000000000000000134300000021161
............................................................................TA---TATCTGCGCATTTTGGGC..................................................................................................................................................................................20124.00241330100000000000000000000000000000010000000000000000000000000000110007022200000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGTT--...................................................................................................................23121.00210060000000001000000010201021001200101000000010000000010000000000000000000000000
...........................................................................................................................................CCTTGTTGCAAACCTCACGCC--A..................................................................................................................22119.00190020000000000000000031102001100020010100000000000000000000000000001001000000101
...................................................................................................GTGTGATTTGTGGCAAAGT...............................................................................................................................................................19119.00190220000000000000010001120000010200000001000000000000000000021100000020000000000
..........................................................................................................................................CCCTTGTTGCAAACCTCACGT......................................................................................................................21119.001900120101000001000000001000001000000000010000000000000000000000000000010000000000
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCT--...................................................................................................................22115.00150381000000000000000010100001000000000000000000000000000000000000000000000000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--C..................................................................................................................24115.00150015000000000000000000000000001000001000000000000000000000000000000000120400000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACT.......................................................................................................................21115.00150053000000000011000010010000010000000000000000000000000000010000000000010000000
....................................................................................................TGTGATTTGTGGCAAAGTGATC...........................................................................................................................................................22115.00150021032000000000000000000000110102000000000000000000000000000200000000000000000
.........................................................................................................................................CCCCTTGTTGCAAACCTC..........................................................................................................................18114.00140251010000000000000000000000000000000000000000000000000100000000000000031000000
...................................................................................................GTGTGATTTGTGGCAAAGTGAA............................................................................................................................................................22114.00140001002000000000000000000000010000000000000000000000000000000000000021000010033
...................................................................................................GTGTGATTTGTGGCAAAGTGATGAGC-.......................................................................................................................................................26113.00130000002000022000000000000102000000000100000000000000000000000000000002000000010
........................................................................................................................................TCCCCTTGTTGCAAACCTCAC........................................................................................................................21111.00110041000000000010010000000102001000000000000000000000000000000000000000000000000
...........................................................................................................................................CCTTGTTGCAAACCTCACGCT--T..................................................................................................................22111.00110020000000000000000000000311000001001100000000000000000000000000000010000000000
...................................................................................................GTGTGATTTGTGGCAAAGTGATG...........................................................................................................................................................23110.00100010002000000000000000000001000000000000000000000000000000000100000011021000000
....................................................................................................TGTGATTTGTGGCAAAGTGATGA..........................................................................................................................................................2319.0090000000000000000000000000101000000000000000000000000000000000200010000001012000
...................................................................................................GTGTGATTTGTGGCAAAGTGT.............................................................................................................................................................2118.0080000031000000010000000000000000000000000000000000000000000000300000000000000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCG--...................................................................................................................2318.0080021000000000000000000000000000000100020000000000000000000000000100100000000000
...........................................................................................................................................CCTTGTTGCAAACCTCACGCT--...................................................................................................................2118.0080031000000000000000000001000001000000000000000000000000010000000000100000000000
...........................................................................................................................................CCTTGTTGCAAACCTCACGCC--T..................................................................................................................2217.0070200000000010000000001000000000000100000000010000100000000000000000000000000000
.......................................................................................................................................ATCCCCTTGTTGCAAACCTCACGC......................................................................................................................2416.0060050000000000000000000000100000000000000000000000000000000000000000000000000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACAA......................................................................................................................2216.0060050000000000000000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCA--...................................................................................................................2216.0060060000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCAAA.......................................................................................................................2115.0050030000000000000000000000000010100000000000000000000000000000000000000000000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGG......................................................................................................................2215.0051120000000000000000100000000000000000000000000000000000000000000000000000000000
...................................................................................................GTGTGATTTGTGGCAAAGTGAAA...........................................................................................................................................................2324.5090000000000000000000000000130000000000000000000000100000000000100000002000010000
.............................................................................................................................................TTGTTGCAAACCTCACGCT--...................................................................................................................1914.0040020000000000001000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCC--...................................................................................................................2214.0040011000000000000000000000000000000000000000000000000000000000000000020000000000
.....................................................................................................GTGATTTGTGGCAAAGTGAT............................................................................................................................................................2014.0040030000000000000000000000001000000000000000000000000000000000000000000000000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGAT--...................................................................................................................2314.0040002000000000000000000000000000000001000000000000000000000000000000100000000000
....................................................................................................TGTGATTTGTGGCAAAGTGATGT..........................................................................................................................................................2314.0040000000000000000000000010011000001000000000000000000000000000000000000000000000
...........................................................................................................................................CCTTGTTGCAAACCTCAC........................................................................................................................1814.0040030000000000000000000000000000000000000000000000000000000001000000000000000000
...........................................................................................................................................CCTTGTTGCAAACCTCACGCC--...................................................................................................................2114.0040010000000000000000000000000100000000100000000000000000000000000000000000100000
...................................................................................................GTGTGATTTGTGGCAAAGTGATTC..........................................................................................................................................................2414.0040000000000000000000000000001100000000000000000000000000000000000000000020000000
...................................................................................................GTGTGATTTGTGGCAAAGTGATCC..........................................................................................................................................................2414.0041000000000000000000010000000010000000000000000000000000000000001000000000000000
....................................................................................................TGTGATTTGTGGCAAAGTG..............................................................................................................................................................1923.5070000010000000000000000010000100100000002000000000000000000001000000000000000000
...................................................................................................GTGTGATTTGTGGCAAAGTGG.............................................................................................................................................................2123.5070010000000000000000000000000000000000000000000000000000000000000000000123000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACTT......................................................................................................................2213.0030110000000000000000000010000000000000000000000000000000000000000000000000000000
...................................................................................................GTGTGATTTGTGGCAAAGA...............................................................................................................................................................1913.0030020000000000000000000000000000000000000000000000000000000001000000000000000000
...................................................................................................GTGTGATTTGTGGCAAAGTT..............................................................................................................................................................2013.0030010000000000000000100000000000000000000000000000000000000001000000000000000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACCT......................................................................................................................2213.0030020000000000000000010000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................CCCTTGTTGCAAACCTCACC.......................................................................................................................2013.0030030000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--G..................................................................................................................2413.0030001000000000000000000000000000000000000000000000000000000000000000010000100000
...................................................................................................GTGTGATTTGTGGCAAAGTGATGAG.........................................................................................................................................................2513.0030000000000000000000000010000000000000010000000000000000000000000010000000000000
............................................................................................................................................CTTGTTGCAAACCTCACGCT--...................................................................................................................2013.0030021000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGTT--T..................................................................................................................2413.0030030000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGTA--...................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000010000000002000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--AA.................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000003000000000000000
..........................................................................................................................................CCCTTGTTGCAAACCTCACGA......................................................................................................................2113.0030020000000000000000000001000000000000000000000000000000000000000000000000000000
........................................................................................................................................TCCCCTTGTTGCAAACCTCACGT......................................................................................................................2313.0030000100000000000000000000000000000000010000000000000000000000000000000000000010
....................................................................A-------TA---TATCTGCGCATTTTGGGC..................................................................................................................................................................................2113.0032000000000000000000000000010000000000000000000000000000000000000000000000000000
....................................................................................................TGTGATTTGTGGCAAAGTGATT...........................................................................................................................................................2213.0030001000000000000000000000000000000000000000000000000000000000100100000000000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCAT........................................................................................................................2012.0020000000000000001000000000000010000000000000000000000000000000000000000000000000
...............................................................................................................................................................C--AAAGGTGGC-GCATT---TA--AC...........................................................................................1912.0020000000000000000000000000000000000000000000000000000000000002000000000000000000
........................................................................................................................................TCCCCTTGTTGCAAACCTCA.........................................................................................................................2012.0020010000000000001000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................CCCTTGTTGCAAACCTCACA.......................................................................................................................2012.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................CCCTTGTTGCAAACCTCA.........................................................................................................................1812.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................GTGTGATTTGTGGCAAAGTGATGA..........................................................................................................................................................2412.0020000000000000000000000000000000000001000000000000000000000000000000001000000000
........................................................................................................................................TCCCCTTGTTGCAAACCTCACC.......................................................................................................................2212.0020010000000000000000001000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCG--G..................................................................................................................2412.0020000001000000000000000010000000000000000000000000000000000000000000000000000000
...................................................................................................GTGTGATTTGTGGCAAAGTC..............................................................................................................................................................2012.0020000000000000000000100000000000000000000000000000000000000001000000000000000000
...................................................................................................GTGTGATTTGTGGCAAAGTGATTT..........................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000002000000
....................................................................................................TGTGATTTGTGGCAAAGTGATGAAA-.......................................................................................................................................................2512.0020000000000000000000000000010000000000000000000000000000000000000000000000000010
............................................................................................................................................CTTGTTGCAAACCTCACGCT--T..................................................................................................................2112.0020010000000001000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TGTGATTTGTGGCAAAGTGATCT..........................................................................................................................................................2312.0020000000000000000000000000000100000000000000000000000000000000100000000000000000
...................................................................................................................................TTCCATCCCCTTGTTGCAAACCTCACGC......................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000020000000000000000
..........................................................................................................................................CCCTTGTTGCAAACCTCAA........................................................................................................................1912.0020010000100000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGAA--...................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000101
.......................................................................................................................................ATCCCCTTGTTGCAAACCTCACG.......................................................................................................................2312.0020020000000000000000000000000000000000000000000000000000000000000000000000000000
droMoj3
TG---G-ATAAAGA---CTAT---T-----C-----GGAGT-----GT-TA----TA-----------TCTATCATGTG--TATTTGCGCATTTTGGTCGTGTGATTTGTGGCAAAGTGATGAGC-TATGATTCCATCCCCTTGTTGCAAACCTCACGCT--GAAGGTGAC-GCATA---GC--AGCAAC---------------AA---TTGAAA-GATA------------------------TT----------------------CGATTAAASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGC......................................................................................................................22166929.006692997412292282415646921
.........................................................................................................................................CCCCTTGTTGCAAACCTCACG.......................................................................................................................21111192.00111925386179205255513928
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--...................................................................................................................2311685.00168521095514542
..........................................................................................................................................CCCTTGTTGCAAACCTCACGC......................................................................................................................2111204.0012048562333400
.........................................................................................................................................CCCCTTGTTGCAAACCTCAC........................................................................................................................201849.0084932218105035
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--...................................................................................................................231793.00793200017720
....................................................................................................TGTGATTTGTGGCAAAGTGATG...........................................................................................................................................................221597.005978373449697204
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGT......................................................................................................................221561.0056117313163231413
........................................................................................................................................TCCCCTTGTTGCAAACCTCACGC......................................................................................................................231559.005591060004530
........................................................................................................................................TCCCCTTGTTGCAAACCTCACG.......................................................................................................................221544.00544190143103270
..........................................................................................................................................CCCTTGTTGCAAACCTCACG.......................................................................................................................201496.00496458113330
....................................................................................................TGTGATTTGTGGCAAAGTGAT............................................................................................................................................................211384.003848117419550100
............................................................................................................................................CTTGTTGCAAACCTCACGC......................................................................................................................191315.00315351002790
...........................................................................................................................................CCTTGTTGCAAACCTCACGC......................................................................................................................201315.00315540002610
...................................................................................................GTGTGATTTGTGGCAAAGTGAT............................................................................................................................................................221305.003054821123188105
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGA......................................................................................................................221246.00246682001751
....................................................................................................TGTGATTTGTGGCAAAGTGA.............................................................................................................................................................201219.0021944533611363
.............................................................................................................................................TTGTTGCAAACCTCACGC......................................................................................................................181212.00212300001820
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--...................................................................................................................231171.00171420001290
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--T..................................................................................................................241169.00169291211360
...................................................................................................GTGTGATTTGTGGCAAAGTGA.............................................................................................................................................................211113.001132013811952
...................................................................................................GTGTGATTTGTGGCAAAGTGATT...........................................................................................................................................................23178.0078124104021
.........................................................................................................................................CCCCTTGTTGCAAACCTCA.........................................................................................................................19163.006314211450
............................................................................................................................................CTTGTTGCAAACCTCACG.......................................................................................................................18153.005334000190
........................................................................................................................................TCCCCTTGTTGCAAACCTCAC........................................................................................................................21150.005014210330
...........................................................................................................................................CCTTGTTGCAAACCTCACG.......................................................................................................................19147.004725000220
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCT--...................................................................................................................22137.003723100130
.........................................................................................................................................CCCCTTGTTGCAAACCTCACC.......................................................................................................................21133.00333000300
...................................................................................................GTGTGATTTGTGGCAAAGTGATA...........................................................................................................................................................23132.00324300205
...................................................................................................GTGTGATTTGTGGCAAAGTGATC...........................................................................................................................................................23131.00318003416
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--T..................................................................................................................24131.00310100300
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--A..................................................................................................................24129.00295200220
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--A..................................................................................................................24124.00242000220
...................................................................................................GTGTGATTTGTGGCAAAGTG..............................................................................................................................................................20124.0024512709
.........................................................................................................................................CCCCTTGTTGCAAACCTCACA.......................................................................................................................21122.00229110110
...................................................................................................GTGTGATTTGTGGCAAAGTGAC............................................................................................................................................................22121.00210100191
..............................................................................G--TATTTGCGCATTTTGGTC..................................................................................................................................................................................19119.00192600101
........................................................................................................................................TCCCCTTGTTGCAAACCTCACGCT--...................................................................................................................24118.00181000170
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--C..................................................................................................................24116.00163100120
........................................................................................................................................TCCCCTTGTTGCAAACCTCA.........................................................................................................................20116.00161100050
..........................................................................................................................................CCCTTGTTGCAAACCTCACGT......................................................................................................................21116.00161310011
........................................................................................................................................TCCCCTTGTTGCAAACCTCACGT......................................................................................................................23115.00152000130
....................................................................................................TGTGATTTGTGGCAAAGTG..............................................................................................................................................................19114.0014015305
..........................................................................................................................................CCCTTGTTGCAAACCTCAC........................................................................................................................19114.00141300010
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCC--...................................................................................................................22114.00143000110
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGG......................................................................................................................22114.00141000130
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCA--...................................................................................................................22112.0012800040
....................................................................................................TGTGATTTGTGGCAAAGTGATC...........................................................................................................................................................22112.0012400008
...........................................................................................................................................CCTTGTTGCAAACCTCACGCT--T..................................................................................................................22111.0011500060
....................................................................................................TGTGATTTGTGGCAAAGTGATT...........................................................................................................................................................22111.0011502103
.........................................................................................................................................CCCCTTGTTGCAAACCTCACT.......................................................................................................................21111.0011302060
...........................................................................................................................................CCTTGTTGCAAACCTCACGCC--...................................................................................................................21111.00111000100
.........................................................................................................................................CCCCTTGTTGCAAACCTCAA........................................................................................................................20110.0010700030
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGAC--...................................................................................................................2319.009000090
....................................................................................................TGTGATTTGTGGCAAAGTGATGT..........................................................................................................................................................2319.009012312
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGTC--...................................................................................................................2319.009201141
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--A..................................................................................................................2418.008200060
...................................................................................................GTGTGATTTGTGGCAAAGTGATGAGC-.......................................................................................................................................................2618.008200006
............................................................................................................................................CTTGTTGCAAACCTCACGCT--...................................................................................................................2018.008000080
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--C..................................................................................................................2418.008000080
....................................................................................................TGTGATTTGTGGCAAAGTGATA...........................................................................................................................................................2217.007110032
............................................................................................................................................CTTGTTGCAAACCTCACGCC--...................................................................................................................2017.007000070
..........................................................................................................................................CCCTTGTTGCAAACCTCACGA......................................................................................................................2117.007700000
...................................................................................................GTGTGATTTGTGGCAAAGT...............................................................................................................................................................1917.007310111
........................................................................................................................................TCCCCTTGTTGCAAACCTCACGCA--...................................................................................................................2416.006300030
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCG--...................................................................................................................2316.006100050
.............................................................................................................................................TTGTTGCAAACCTCACGCC--...................................................................................................................1916.006100050
...........................................................................................................................................CCTTGTTGCAAACCTCACGCC--T..................................................................................................................2216.006100140
.............................................................................TG--TATTTGCGCATTTTGGTC..................................................................................................................................................................................2016.006120030
...........................................................................................................................................CCTTGTTGCAAACCTCACGCT--...................................................................................................................2116.006100050
........................................................................................................................................TCCCCTTGTTGCAAACCTCACGA......................................................................................................................2315.005200030
...................................................................................................GTGTGATTTGTGGCAAAGTGAA............................................................................................................................................................2215.005210011
....................................................................................................TGTGATTTGTGGCAAAGTGAC............................................................................................................................................................2115.005001040
...................................................................................................GTGTGATTTGTGGCAAAGTGATTT..........................................................................................................................................................2414.004210010
.........................................................................................................................................CCCCTTGTTGCAAACCTCAT........................................................................................................................2014.004000040
.........................................................................................................................................CCCCTTGTTGCAAACCTC..........................................................................................................................1814.004000040
droWil2
AAATAT-CTTAAGT---ACAT---T-----T----------GTTTAGTTAA----AA-----------C-------GA---ATTGTGGGCATTTCGGGCGTGTGATTTGTAGCAAAGTGATATGTACTTGAT--AATCCCCTTGTTGCAAACCTCACGCCGGAAAGATGTC-TCC----AA---------ATACA---TCAGTCG-ATA---TC-C------AG-------------AATCAGTTT-----------------------GCAATTTTSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGC......................................................................................................................2215587.005587493400441646403
.........................................................................................................................................CCCCTTGTTGCAAACCTCACG.......................................................................................................................2113774.003774196215023712693
...................................................................................................GTGTGATTTGTAGCAAAGTGAT............................................................................................................................................................221890.0089022913355301172
..........................................................................................................................................CCCTTGTTGCAAACCTCACGC......................................................................................................................211325.0032523001148
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGT......................................................................................................................221297.00297286149798
...................................................................................................GTGTGATTTGTAGCAAAGTGA.............................................................................................................................................................211283.0028335573211643
..........................................................................................................................................CCCTTGTTGCAAACCTCACG.......................................................................................................................201176.0017601590107
.........................................................................................................................................CCCCTTGTTGCAAACCTCAC........................................................................................................................201109.0010996921019
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCT.....................................................................................................................23191.009195701312
...................................................................................................GTGTGATTTGTAGCAAAGTGATA...........................................................................................................................................................23187.00875362224
...................................................................................................GTGTGATTTGTAGCAAAGTGATT...........................................................................................................................................................23170.00703286195
............................................................................................................................................CTTGTTGCAAACCTCACGC......................................................................................................................19167.0067067000
...................................................................................................GTGTGATTTGTAGCAAAGTG..............................................................................................................................................................20166.006621061929
....................................................................................................TGTGATTTGTAGCAAAGTGATA...........................................................................................................................................................22158.00581271362
....................................................................................................TGTGATTTGTAGCAAAGTGAT............................................................................................................................................................21153.00533263129
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCC.....................................................................................................................23145.00451526040
.............................................................................................................................................TTGTTGCAAACCTCACGC......................................................................................................................18132.0032031010
...................................................................................................GTGTGATTTGTAGCAAAGTGATC...........................................................................................................................................................23131.0031178303
.........................................................................................................................................CCCCTTGTTGCAAACCTCA.........................................................................................................................19129.002915689
...........................................................................................................................................CCTTGTTGCAAACCTCACGC......................................................................................................................20126.0026025001
...................................................................................................GTGTGATTTGTAGCAAAGT...............................................................................................................................................................19124.0024431340
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCA.....................................................................................................................23123.0023115070
............................................................................................................................................CTTGTTGCAAACCTCACG.......................................................................................................................18119.0019018001
...........................................................................................................................................CCTTGTTGCAAACCTCACG.......................................................................................................................19116.0016013021
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGA......................................................................................................................22114.0014011021
...................................................................................................GTGTGATTTGTAGCAAAGTGAC............................................................................................................................................................22113.0013101101
....................................................................................................TGTGATTTGTAGCAAAGTGA.............................................................................................................................................................20111.001114222
....................................................................C-------GA---ATTGTGGGCATTTCGGGC..................................................................................................................................................................................21111.001141042
..........................................................................................................................................CCCTTGTTGCAAACCTCACGT......................................................................................................................21110.001004132
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCTT....................................................................................................................2419.00908001
.............................................................................A---ATTGTGGGCATTTCGGGC..................................................................................................................................................................................1919.00930033
........................................................................................................................................TCCCCTTGTTGCAAACCTCACGC......................................................................................................................2319.00908010
.....................................................................................................GTGATTTGTAGCAAAGTGAT............................................................................................................................................................2018.00843010
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCAA....................................................................................................................2418.00805030
........................................................................................................................................TCCCCTTGTTGCAAACCTCACG.......................................................................................................................2217.00706100
...................................................................................................GTGTGATTTGTAGCAAAG................................................................................................................................................................1817.00770000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCG.....................................................................................................................2317.00704003
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCT.....................................................................................................................2216.00603012
...................................................................................................GTGTGATTTGTAGCAAAGTGAA............................................................................................................................................................2216.00620130
...................................................................................................GTGTGATTTGTAGCAAAGTGG.............................................................................................................................................................2116.00660000
.................................................................................ATTGTGGGCATTTCGGGC..................................................................................................................................................................................1816.00620022
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCCA....................................................................................................................2415.00503020
..........................................................................................................................................CCCTTGTTGCAAACCTCAC........................................................................................................................1915.00505000
............................................................................GA---ATTGTGGGCATTTCGGGC..................................................................................................................................................................................2015.00530002
.........................................................................................................................................CCCCTTGTTGCAAACCTCACA.......................................................................................................................2114.00403010
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCCT....................................................................................................................2414.00413000
..........................................................................................................................................CCCTTGTTGCAAACCTCA.........................................................................................................................1813.00303000
........................................................A-----------C-------GA---ATTGTGGGCATTTCGGGC..................................................................................................................................................................................2213.00310002
.........................................................................................................................................CCCCTTGTTGCAAACCTCACT.......................................................................................................................2113.00300021
....................................................................................................TGTGATTTGTAGCAAAGTGATT...........................................................................................................................................................2213.00302001
....................................................................................................TGTGATTTGTAGCAAAGTG..............................................................................................................................................................1913.00302001
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGTT.....................................................................................................................2313.00303000
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCC.....................................................................................................................2213.00312000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACC.......................................................................................................................2113.00300012
....................................................................................................TGTGATTTGTAGCAAAGTGATAA..........................................................................................................................................................2312.00200011
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCA.....................................................................................................................2212.00202000
.........................................................................................................................................CCCCTTGTTGCAAACCTCAT........................................................................................................................2012.00220000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGG......................................................................................................................2212.00202000
...........................................................................................................................................CCTTGTTGCAAACCTCACGCTT....................................................................................................................2212.00202000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCCC....................................................................................................................2412.00211000
...................................................................................................GTGTGATTTGTAGCAAAGTGT.............................................................................................................................................................2112.00201001
....................................................................................................TGTGATTTGTAGCAAAGTGATG...........................................................................................................................................................2211.00101000
...................................................................................................GTGTGATTTGTAGCAAAGTGATCC..........................................................................................................................................................2411.00110000
...................................................................................................GTGTGATTTGTAGCAAAGTGATAA..........................................................................................................................................................2411.00100010
...................................................................................................GTGTGATTTGTAGCAAAGTGACC...........................................................................................................................................................2311.00110000
......................................................................................................TGATTTGTAGCAAAGTGA.............................................................................................................................................................1811.00101000
.....................................................................................................GTGATTTGTAGCAAAGTGATA...........................................................................................................................................................2111.00101000
....................................................................................................TGTGATTTGTAGCAAAGT...............................................................................................................................................................1811.00101000
............................................................................................................................................CTTGTTGCAAACCTCACGCA.....................................................................................................................2011.00101000
............................................................................................................................................CTTGTTGCAAACCTCACGT......................................................................................................................1911.00101000
.........................................................................................................................................CCCCTTGTTGCAAACCTG..........................................................................................................................1811.00110000
...................................................................................................GTGTGATTTGTAGCAAAGTGATAAA.........................................................................................................................................................2511.00100010
.............................................................................................................................................TTGTTGCAAACCTCACGCT.....................................................................................................................1911.00101000
...........................................................................................................................................CCTTGTTGCAAACCTCACGCA.....................................................................................................................2111.00101000
..........................................................................................................................................CCCTTGTTGCAAACCTCACGA......................................................................................................................2111.00101000
........................................................................................................................................TCCCCTTGTTGCAAACCTCACGCT.....................................................................................................................2411.00101000
......................................................................................................................GATATGTACTTGAT--AATCCCCTTGTTGCA................................................................................................................................2911.00101000
...................................................................................................GTGTGATTTGTAGCAAAGTGATATG.........................................................................................................................................................2511.00100010
.............................................................................................................................................TTGTTGCAAACCTCACGT......................................................................................................................1811.00101000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCTA....................................................................................................................2411.00101000
............................................................................................................................................CTTGTTGCAAACCTCACGTAA....................................................................................................................2111.00101000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCCG....................................................................................................................2411.00100001
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCTC....................................................................................................................2411.00101000
...................................................................................................GTGTGATTTGTAGCAAAGTGATG...........................................................................................................................................................2311.00100010
...........................................................................................................................................CCTTGTTGCAAACCTCACGCCT....................................................................................................................2211.00110000
...................................................................................................GTGTGATTTGTAGCAAAGTGACT...........................................................................................................................................................2311.00100010
......................................................................................................................................AATCCCCTTGTTGCAAACCTCACGC......................................................................................................................2511.00101000
...........................................................................................................................................CCTTGTTGCAAACCTCACGT......................................................................................................................2011.00101000
.....................................................................................................GTGATTTGTAGCAAAGTGA.............................................................................................................................................................1911.00100010
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCCC....................................................................................................................2311.00101000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACAA......................................................................................................................2211.00101000
...................................................................................................GTGTGATTTGTAGCAAAGTGATAG..........................................................................................................................................................2411.00100100
....................................................................................................................................................................................A---------ATACA---TCAGTCG-ATA---TC-C------AG-------------........................................2111.00100010
...........................................................................................................................................CCTTGTTGCAAACCTCACGCCA....................................................................................................................2211.00101000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCTTT...................................................................................................................2511.00101000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCCCCC..................................................................................................................2611.00100001
..................................................................................................CGTGTGATTTGTAGCAAAG................................................................................................................................................................1911.00110000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCGT....................................................................................................................2411.00110000
dp5
GG---A-TAACTGG---GTAT-----CCAGGAATCCA----------------------------------------G---ACTGTGGACATTTTGGGTGTGTGATTTGTGGCAAAGTGATATGCATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGTTGAA-TCCCA---C-AC------CTACACTCTCATATA-ATGA---T-C------ATG--------------TGAACG---AA---------------A------ACAAASizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGC......................................................................................................................22115118.0015118360915234321019922133451864
.........................................................................................................................................CCCCTTGTTGCAAACCTCACG.......................................................................................................................2116757.006757148925787092901664139356
..........................................................................................................................................CCCTTGTTGCAAACCTCACGC......................................................................................................................211702.0070206152552251011
...................................................................................................GTGTGATTTGTGGCAAAGTG..............................................................................................................................................................201436.0043612560233510351912
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGT......................................................................................................................221401.0040102055720374831300
..........................................................................................................................................CCCTTGTTGCAAACCTCACG.......................................................................................................................201400.00400037658621020
.........................................................................................................................................CCCCTTGTTGCAAACCTCAC........................................................................................................................201365.00365016952134531010
...................................................................................................GTGTGATTTGTGGCAAAGTGAT............................................................................................................................................................221352.003521130295172842321652
...................................................................................................GTGTGATTTGTGGCAAAGTGA.............................................................................................................................................................211288.0028801452161842131744
....................................................................................................TGTGATTTGTGGCAAAGTGAT............................................................................................................................................................211130.001300687252215245
...................................................................................................GTGTGATTTGTGGCAAAGT...............................................................................................................................................................191123.00123080211623046
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--...................................................................................................................231112.001120245829100000
....................................................................................................TGTGATTTGTGGCAAAGTGA.............................................................................................................................................................201105.0010504910016106914
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--...................................................................................................................23197.00970473216010010
............................................................................................................................................CTTGTTGCAAACCTCACGC......................................................................................................................19191.00910562011300001
...........................................................................................................................................CCTTGTTGCAAACCTCACGC......................................................................................................................20186.00860541219000100
........................................................................................................................................TCCCCTTGTTGCAAACCTCACG.......................................................................................................................22169.006904399420200
...................................................................................................GTGTGATTTGTGGCAAAGTGT.............................................................................................................................................................21165.0065039220316300
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--...................................................................................................................23164.0064038157100030
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGA......................................................................................................................22158.0058034159000000
.............................................................................................................................................TTGTTGCAAACCTCACGC......................................................................................................................18153.0053035710100000
...................................................................................................GTGTGATTTGTGGCAAAGTT..............................................................................................................................................................20251.50103076000419022
............................................................................................................................................CTTGTTGCAAACCTCACG.......................................................................................................................18147.004704042100000
...................................................................................................GTGTGATTTGTGGCAAAG................................................................................................................................................................18131.003101410120148
....................................................................................................TGTGATTTGTGGCAAAGTG..............................................................................................................................................................19130.003002800001100
....................................................................................................TGTGATTTGTGGCAAAGTGATA...........................................................................................................................................................22129.00290901374113
...................................................................................................GTGTGATTTGTGGCAAAGTGATA...........................................................................................................................................................23129.002905610121112
...........................................................................................................................................CCTTGTTGCAAACCTCACG.......................................................................................................................19124.002402211000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCA.........................................................................................................................19121.002101224111000
....................................................................................................TGTGATTTGTGGCAAAGTGT.............................................................................................................................................................20118.00180700037100
........................................................................................................................................TCCCCTTGTTGCAAACCTCACGC......................................................................................................................23116.001601132000000
..................................................................................................TGTGTGATTTGTGGCAAAGTGA.............................................................................................................................................................22115.00150700024020
..........................................................................................................................................CCCTTGTTGCAAACCTCACGT......................................................................................................................21113.001301300000000
...........................................................................................................................................CCTTGTTGCAAACCTCACGCC--...................................................................................................................21111.001101010000000
...........................................................................................................................................CCTTGTTGCAAACCTCACGCC--A..................................................................................................................22111.001101100000000
...................................................................................................GTGTGATTTGTGGCAAAGTGATT...........................................................................................................................................................23111.00110810001010
.........................................................................................................................................CCCCTTGTTGCAAACCTCACA.......................................................................................................................21111.00110514100000
..........................................................................................................................................CCCTTGTTGCAAACCTCAC........................................................................................................................19110.00100800000020
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--A..................................................................................................................24110.00100721000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGTT--...................................................................................................................23110.00100503101000
....................................................................................................TGTGATTTGTGGCAAAGTGATT...........................................................................................................................................................22110.00100400020310
..................................................................................................TGTGTGATTTGTGGCAAAGTGAT............................................................................................................................................................2319.0090300210210
.............................................................................G---ACTGTGGACATTTTGGGT..................................................................................................................................................................................1918.0080201401000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACC.......................................................................................................................2118.0080152000000
.....................................................................................................GTGATTTGTGGCAAAGTGAT............................................................................................................................................................2017.0070700000000
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCC--...................................................................................................................2217.0070421000000
...................................CA----------------------------------------G---ACTGTGGACATTTTGGGT..................................................................................................................................................................................2116.0060000000501
..................................................................................................TGTGTGATTTGTGGCAAAGTG..............................................................................................................................................................2116.0060100040100
.........................................................................................................................................CCCCTTGTTGCAAACCTCACT.......................................................................................................................2116.0060402000000
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCA--...................................................................................................................2216.0060501000000
...................................................................................................GTGTGATTTGTGGCAAAGTTT.............................................................................................................................................................2145.002001400032100
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGG......................................................................................................................2215.0050211100000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--T..................................................................................................................2415.0050401000000
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCT--...................................................................................................................2215.0050311000000
...................................................................................................GTGTGATTTGTGGCAAAGTGAA............................................................................................................................................................2214.0040100001020
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCG--...................................................................................................................2314.0040301000000
.............................................................................................................................................TTGTTGCAAACCTCACGT......................................................................................................................1814.0040400000000
...................................................................................................GTGTGATTTGTGGCAAAGTGATC...........................................................................................................................................................2314.0041200001000
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCC--A..................................................................................................................2314.0040400000000
.........................................................................................................................................CCCCTTGTTGCAAACCTC..........................................................................................................................1814.0040211000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCAA........................................................................................................................2013.0030300000000
........................................................................................................................................TCCCCTTGTTGCAAACCTCAC........................................................................................................................2113.0030021000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--T..................................................................................................................2413.0030210000000
...................................................................................................GTGTGATTTGTGGCAAAGC...............................................................................................................................................................1913.0030000001002
....................................A----------------------------------------G---ACTGTGGACATTTTGGGT..................................................................................................................................................................................2013.0030100000101
...................................................................................................GTGTGATTTGTGGCAAAGTGATATG.........................................................................................................................................................2513.0030000000030
..........................................................................................................................................CCCTTGTTGCAAACCTCACGA......................................................................................................................2113.0030300000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACTT......................................................................................................................2212.0020011000000
....................................................................................................TGTGATTTGTGGCAAAGTGATAA..........................................................................................................................................................2312.0020000200000
.......................................................................................................................................ATCCCCTTGTTGCAAACCTCACG.......................................................................................................................2312.0020200000000
...................................................................................................GTGTGATTTGTGGCAAAGTGC.............................................................................................................................................................2112.0020001100000
...................................................................................................GTGTGATTTGTGGCAAAGTGAC............................................................................................................................................................2212.0020010100000
...........................................................................................................................................CCTTGTTGCAAACCTCAC........................................................................................................................1812.0020200000000
..........................................................................................................................................CCCTTGTTGCAAACCTCACGTT--...................................................................................................................2212.0020200000000
.....................................................................................................GTGATTTGTGGCAAAGTGA.............................................................................................................................................................1912.0020200000000
...................................................................................................GTGTGATTTGTGGCAAAGTGG.............................................................................................................................................................2112.0020200000000
....................................................................................................TGTGATTTGTGGCAAAGTGATAT..........................................................................................................................................................2312.0020100001000
....................................................................................................TGTGATTTGTGGCAAAGTGATG...........................................................................................................................................................2212.0020010100000
....................................................................................................TGTGATTTGTGGCAAAGTGAA............................................................................................................................................................2112.0020100010000
....................................................................................................TGTGATTTGTGGCAAAGT...............................................................................................................................................................1812.0020200000000
...................................................................................................GTGTGATTTGTGGCAAAGTA..............................................................................................................................................................2041.7570700000000
....................................................................................................TGTGATTTGTGGCAAAGTT..............................................................................................................................................................1941.5060600000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGAA--...................................................................................................................2311.0010100000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCT.........................................................................................................................1911.0010100000000
........................................................................................................................................TCCCCTTGTTGCAAACCTCT.........................................................................................................................2011.0010100000000
............................................................................................................................................CTTGTTGCAAACCTCACGT......................................................................................................................1911.0010100000000
...........................................................................................................................................CCTTGTTGCAAACCTCACGTT--...................................................................................................................2111.0010100000000
...................................................................................................GTGTGATTTGTGGCAAAGTGATAT..........................................................................................................................................................2411.0010100000000
......................................................................................................TGATTTGTGGCAAAGTGA.............................................................................................................................................................1811.0010100000000
....................................................................................................TGTGATTTGTGGCAAAGTGAC............................................................................................................................................................2111.0010010000000
droPer2
CC---C-GGATAACTGGGTAT-----CCAGGAATCCA----------------------------------------G---ACTGTGGACATTTTGGGTGTGTGATTTGTGGCAAAGTGATATGCATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGTTGAA-TCCCA---C-AC------CTACACTCTCAGATA-ATGA---T-C------ATG--------------TGAACG---AA---------------A------ACAAASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.........................................................................................................................................CCCCTTGTTGCAAACCTCACG.......................................................................................................................2111375.001375217869821524510
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGC......................................................................................................................2211294.00129424829331372674
...................................................................................................GTGTGATTTGTGGCAAAGTG..............................................................................................................................................................201497.0049721721727432
...................................................................................................GTGTGATTTGTGGCAAAGTGA.............................................................................................................................................................211339.003390821331285
...................................................................................................GTGTGATTTGTGGCAAAGTGAT............................................................................................................................................................221250.0025001261736179
...................................................................................................GTGTGATTTGTGGCAAAGTGT.............................................................................................................................................................211150.0015007056132
...................................................................................................GTGTGATTTGTGGCAAAGT...............................................................................................................................................................191146.00146051514121
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGT......................................................................................................................221134.00134029639564
....................................................................................................TGTGATTTGTGGCAAAGTGAT............................................................................................................................................................211131.001310121114562
..........................................................................................................................................CCCTTGTTGCAAACCTCACGC......................................................................................................................21198.00980892160
...................................................................................................GTGTGATTTGTGGCAAAGTT..............................................................................................................................................................20296.50193460918156
....................................................................................................TGTGATTTGTGGCAAAGTGA.............................................................................................................................................................20183.008304092743
..........................................................................................................................................CCCTTGTTGCAAACCTCACG.......................................................................................................................20167.00670621130
.........................................................................................................................................CCCCTTGTTGCAAACCTCAC........................................................................................................................20160.006013349121
....................................................................................................TGTGATTTGTGGCAAAGTGT.............................................................................................................................................................20119.00190202510
...................................................................................................GTGTGATTTGTGGCAAAGTGATA...........................................................................................................................................................23116.0016222109
..................................................................................................TGTGTGATTTGTGGCAAAGTGA.............................................................................................................................................................22116.0016011266
....................................................................................................TGTGATTTGTGGCAAAGTG..............................................................................................................................................................19115.0015040137
..................................................................................................TGTGTGATTTGTGGCAAAGTGAT............................................................................................................................................................23115.00150021210
.........................................................................................................................................CCCCTTGTTGCAAACCTCA.........................................................................................................................19115.0015020562
........................................................................................................................................TCCCCTTGTTGCAAACCTCACG.......................................................................................................................22112.0012071220
....................................................................................................TGTGATTTGTGGCAAAGTGATA...........................................................................................................................................................22111.0011011423
...................................................................................................GTGTGATTTGTGGCAAAG................................................................................................................................................................18111.0011011315
.............................................................................G---ACTGTGGACATTTTGGGT..................................................................................................................................................................................19110.0010000109
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--...................................................................................................................2319.009051210
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGA......................................................................................................................2218.008070100
...................................................................................................GTGTGATTTGTGGCAAAGTC..............................................................................................................................................................2017.007000106
............................................................................................................................................CTTGTTGCAAACCTCACG.......................................................................................................................1817.007070000
...................................................................................................GTGTGATTTGTGGCAAAGTTT.............................................................................................................................................................2146.50260002222
...................................................................................................GTGTGATTTGTGGCAAAGTGAA............................................................................................................................................................2216.006000015
...................................................................................................GTGTGATTTGTGGCAAAGTGTC............................................................................................................................................................2216.006000006
...................................................................................................GTGTGATTTGTGGCAAAGTGATT...........................................................................................................................................................2316.006000015
...........................................................................................................................................CCTTGTTGCAAACCTCACG.......................................................................................................................1915.005030110
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--...................................................................................................................2315.005041000
..........................................................................................................................................CCCTTGTTGCAAACCTCAC........................................................................................................................1914.004040000
....................................................................................................TGTGATTTGTGGCAAAGTGATT...........................................................................................................................................................2214.004020002
...........................................................................................................................................CCTTGTTGCAAACCTCACGC......................................................................................................................2014.004040000
...................................................................................................GTGTGATTTGTGGCAAAGTGATATGC........................................................................................................................................................2614.004000004
...................................................................................................GTGTGATTTGTGGCAAAGTGTA............................................................................................................................................................2213.003000003
.............................................................................................................................................TTGTTGCAAACCTCACGC......................................................................................................................1813.003030000
...................................................................................................GTGTGATTTGTGGCAAAGTGATATG.........................................................................................................................................................2513.003000003
............................................................................................................................................CTTGTTGCAAACCTCACGC......................................................................................................................1913.003011100
...................................................................................................GTGTGATTTGTGGCAAAGTGATTC..........................................................................................................................................................2413.003000003
...................................................................................................GTGTGATTTGTGGCAAAGTCT.............................................................................................................................................................2112.002000002
...................................................................................................GTGTGATTTGTGGCAAAGTGATCG..........................................................................................................................................................2412.002000002
...................................................................................................GTGTGATTTGTGGCAAAGTGATC...........................................................................................................................................................2312.002000002
...........................................................................................................................................CCTTGTTGCAAACCTCACGCC--A..................................................................................................................2212.002010010
..........................................................................................................................................CCCTTGTTGCAAACCTCACGT......................................................................................................................2112.002020000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--...................................................................................................................2312.002110000
....................................................................................................TGTGATTTGTGGCAAAGTGATATG.........................................................................................................................................................2412.002000002
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCG--G..................................................................................................................2412.002200000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGG......................................................................................................................2212.002020000
...................................................................................................GTGTGATTTGTGGCAAAGTGATCC..........................................................................................................................................................2412.002000002
.........................................................................................................................................CCCCTTGTTGCAAACCTCACC.......................................................................................................................2112.002010010
...................................................................................................GTGTGATTTGTGGCAAAGTA..............................................................................................................................................................2031.334010021
...........................................................................................................................................CCTTGTTGCAAACCTCACGCC--...................................................................................................................2111.001000100
...................................................................................................GTGTGATTTGTGGCAAAGTGATAAA.........................................................................................................................................................2511.001000001
..........................................................................................................................................CCCTTGTTGCAAACCTCA.........................................................................................................................1811.001000010
.........................................................................................................................................CCCCTTGTTGCAAACCTCACA.......................................................................................................................2111.001000010
.........................................................................................................................................CCCCTTGTTGCAAACCTCACAT......................................................................................................................2211.001001000
...................................................................................................GTGTGATTTGTGGCAAAGTGATATGCA.......................................................................................................................................................2711.001000001
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCT--...................................................................................................................2211.001010000
...................................................................................................GTGTGATTTGTGGCAAAGTGATAT..........................................................................................................................................................2411.001000001
...........................................................................................................................................CCTTGTTGCAAACCTCACGT......................................................................................................................2011.001010000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--A..................................................................................................................2411.001010000
.........................................................................................................................................CCCCTTGTTGCAAACCTCG.........................................................................................................................1911.001010000
....................................................................................................TGTGATTTGTGGCAAAGTGATAT..........................................................................................................................................................2311.001010000
.....................................................................................................GTGATTTGTGGCAAAGTGAT............................................................................................................................................................2011.001010000
..................................................................................................TGTGTGATTTGTGGCAAAGTGATT...........................................................................................................................................................2411.001000100
....................................................................................................TGTGATTTGTGGCAAAGTGG.............................................................................................................................................................2011.001000010
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCC--...................................................................................................................2211.001010000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCG--...................................................................................................................2311.001000010
.........................................................................................................................................CCCCTTGTTGCAAACCTCACT.......................................................................................................................2111.001000010
......................................................................................................................................CATCCCCTTGTTGCAAACCT...........................................................................................................................2011.001000010
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCA--...................................................................................................................2211.001001000
........................................................................................................................................TCCCCTTGTTGCAAACCTCACGC......................................................................................................................2311.001001000
.......................................................................................................GATTTGTGGCAAAGTGAT............................................................................................................................................................1811.001000100
droAna3
TA---A-TGGAATC---A--G---T-----A--------------AGTGGA----AA-----------G-------GT---GTACTGGACATTTTGGGTGTGTGATTTGTGGCAAAGTGATAGGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--CAAGGTGCT-TTCCA-A-C---GGCAACATA--TCAGC---------------AAG-----------------G---AA----G-------------------------ACTAAGSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGC......................................................................................................................2217701.007701260048186410514100
.........................................................................................................................................CCCCTTGTTGCAAACCTCACG.......................................................................................................................2112345.00234510907058414932285
...................................................................................................GTGTGATTTGTGGCAAAGTGA.............................................................................................................................................................211610.006101193315355115
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGT......................................................................................................................221342.003421157111513361
...................................................................................................GTGTGATTTGTGGCAAAGTGAT............................................................................................................................................................221318.00318758214100119
..........................................................................................................................................CCCTTGTTGCAAACCTCACGC......................................................................................................................211284.00284243361400
.........................................................................................................................................CCCCTTGTTGCAAACCTCAC........................................................................................................................201196.00196491283538
...................................................................................................GTGTGATTTGTGGCAAAGTG..............................................................................................................................................................201167.00167230097461
..........................................................................................................................................CCCTTGTTGCAAACCTCACG.......................................................................................................................201113.001139980402
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--...................................................................................................................231105.0010541590203
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--...................................................................................................................23175.007511585001
...................................................................................................GTGTGATTTGTGGCAAAGT...............................................................................................................................................................19175.007590114816
............................................................................................................................................CTTGTTGCAAACCTCACGC......................................................................................................................19173.007329422000
.............................................................................T---GTACTGGACATTTTGGGT..................................................................................................................................................................................19173.007315133744
....................................................................................................TGTGATTTGTGGCAAAGTGA.............................................................................................................................................................20154.0054151061418
...................................................................................................GTGTGATTTGTGGCAAAGTGATT...........................................................................................................................................................23149.0049131001619
....................................................................................................TGTGATTTGTGGCAAAGTGAT............................................................................................................................................................21146.0046102041020
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--...................................................................................................................23145.00459350001
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGA......................................................................................................................22138.003819170101
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--A..................................................................................................................24134.00340340000
...................................................................................................GTGTGATTTGTGGCAAAGTGATA...........................................................................................................................................................23132.00325200520
...........................................................................................................................................CCTTGTTGCAAACCTCACGC......................................................................................................................20128.002811170000
.........................................................................................................................................CCCCTTGTTGCAAACCTCA.........................................................................................................................19128.00287170112
.............................................................................................................................................TTGTTGCAAACCTCACGC......................................................................................................................18125.00259160000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGTT--...................................................................................................................23119.00191520002
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--T..................................................................................................................24117.00171321001
..........................................................................................................................................CCCTTGTTGCAAACCTCACGT......................................................................................................................21115.00151010310
............................................................................................................................................CTTGTTGCAAACCTCACG.......................................................................................................................18113.0013750001
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGG......................................................................................................................22111.00111000001
...................................................................................................GTGTGATTTGTGGCAAAG................................................................................................................................................................18110.0010200224
....................................................................................................TGTGATTTGTGGCAAAGTGATA...........................................................................................................................................................2219.009301023
...................................................................................................GTGTGATTTGTGGCAAAGTGATAGGT........................................................................................................................................................2619.009100080
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCT--...................................................................................................................2219.009710100
....................................................................................................TGTGATTTGTGGCAAAGTG..............................................................................................................................................................1918.008300014
.........................................................................................................................................CCCCTTGTTGCAAACCTCACC.......................................................................................................................2118.008251000
...................................................................................................GTGTGATTTGTGGCAAAGTGC.............................................................................................................................................................2118.008000161
...........................................................................................................................................CCTTGTTGCAAACCTCACG.......................................................................................................................1918.008620000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACT.......................................................................................................................2117.007110005
...................................................................................................GTGTGATTTGTGGCAAAGTGATC...........................................................................................................................................................2317.007200014
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--A..................................................................................................................2416.006060000
...........................................................................................................................................CCTTGTTGCAAACCTCACGCT--T..................................................................................................................2216.006230001
........................................................................................................................................TCCCCTTGTTGCAAACCTCACG.......................................................................................................................2216.006510000
...................................................................................................GTGTGATTTGTGGCAAAGTGT.............................................................................................................................................................2116.006100041
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--A..................................................................................................................2415.005041000
..........................................................................................................................................CCCTTGTTGCAAACCTCAC........................................................................................................................1915.005410000
..................................................................................................TGTGTGATTTGTGGCAAAGTG..............................................................................................................................................................2114.004000202
...................................................................................................GTGTGATTTGTGGCAAAGTGAC............................................................................................................................................................2214.004200002
.........................................................................................................................................CCCCTTGTTGCAAACCTCACA.......................................................................................................................2114.004030001
............................................................................................................................................CTTGTTGCAAACCTCACGT......................................................................................................................1914.004121000
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCT--T..................................................................................................................2314.004310000
....................................................................................................TGTGATTTGTGGCAAAGTGATT...........................................................................................................................................................2214.004100021
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCC--...................................................................................................................2214.004040000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACAT......................................................................................................................2213.003100011
...................................................................................................GTGTGATTTGTGGCAAAGTGATAG..........................................................................................................................................................2413.003100020
............................................................................GT---GTACTGGACATTTTGGGT..................................................................................................................................................................................2013.003010002
.........................................................................................................................................CCCCTTGTTGCAAACCTCAT........................................................................................................................2013.003120000
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCA--...................................................................................................................2213.003300000
...................................................................................................GTGTGATTTGTGGCAAAGTT..............................................................................................................................................................2013.003100011
..................................................................................................TGTGTGATTTGTGGCAAAGTGA.............................................................................................................................................................2213.003200001
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCG--...................................................................................................................2313.003210000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--TT.................................................................................................................2512.002200000
..........................................................................................................................................CCCTTGTTGCAAACCTCACGTT--...................................................................................................................2212.002200000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGAA--...................................................................................................................2312.002110000
.............................................................................T---GTACTGGACATTTTGGGC..................................................................................................................................................................................1912.002020000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--T..................................................................................................................2412.002200000
........................................................................................................................................TCCCCTTGTTGCAAACCTCACGC......................................................................................................................2312.002110000
...................................................................................................GTGTGATTTGTGGCAAAGTGATAGGTA.......................................................................................................................................................2712.002100010
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCA--A..................................................................................................................2312.002011000
...........................................................................................................................................CCTTGTTGCAAACCTCACGT......................................................................................................................2012.002020000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACTT......................................................................................................................2212.002110000
.....................................................................................................GTGATTTGTGGCAAAGTGA.............................................................................................................................................................1912.002100010
...................................................................................................GTGTGATTTGTGGCAAAGTGATG...........................................................................................................................................................2312.002000002
.................................................................................GTACTGGACATTTTGGGT..................................................................................................................................................................................1812.002000002
...................................................................................................GTGTGATTTGTGGCAAAGTGATAGG.........................................................................................................................................................2512.002000020
...................................................................................................GTGTGATTTGTGGCAAAGTGG.............................................................................................................................................................2121.503200010
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--AT.................................................................................................................2511.001010000
.............................................................................................................................ATTTGAT--CATCCCCTTGTTGCAAACC............................................................................................................................2611.001010000
..........................................................................................................................................CCCTTGTTGCAAACCTCACGTT--T..................................................................................................................2311.001000001
.................................................GA----AA-----------G-------GT---GTACTGGACATTTTGGGT..................................................................................................................................................................................2511.001010000
droBip1
CT---C-TAAGGGT----------------T----------GAATAGTGAA----CA-----------G-------GTTTTTTACTGGACATTTTGGGTGTGTGATTTGTGGCAATGTGATAGGTATTTGAT--AATCCCCTTGTTGCAAACCTCACGCC--AAAGATGAT-ATCCATAT----AGCAAC---------------GT---TATT-AAG--------------------GTC----A-----------------------CCAAAGTGSizeHit CountTotal NormTotal
No Reads
droKik1
CTG-AG-CTGAA-------AT---C-----T------------------------TG--GCATTTGTGACTAT--------CAAGTGGGCATTTTGGGTGTGTGATTTGTGGCAAAGTGATATGTATTTGAT--GATCCCCTTGTTGCAAACCTCACGCC--AAAGATGGAATCCTA---TC--CACA-------T---C---------------AAG-----------------G---AA----GTG-----------------------CATCCASizeHit CountTotal NormTotal
No Reads
droFic1
GG---T-GTAGGGG---ATAT-----TAAAG--------------------------------------------------TATCTGGGCGTTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGGA-TCCCA---C-A--------TA--ACATCAAATG-AAATAAGCTG------A--------------AGTGATTA---AA---------------AATT---CTATASizeHit CountTotal NormTotal
No Reads
droEle1
CT---G-TTTAAGA---TCAG---T-----T---T-------------GCA--CACGAGGATTTT---C-------CG---GTTCAGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGAG-ACCTATGA----AACAAC---------------AT---TAGTTA-G-------------------AGTG----AT----------------------GTATTGGTSizeHit CountTotal NormTotal
No Reads
droRho1
TT---T-CTAAAGA---ATATCAGT-----G------------------AACAA-ATTGGATTGT---C-------CG---ACTCTGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGAG-TCCCACAA----AACAAC---------------AT---TAATTA------A--------------AGTG----G-----------------------TAAATGTTSizeHit CountTotal NormTotal
No Reads
droBia1
AT---T-GAAAAAA---ATGT---CTTCAAC-------------------------------TCT---T-------CA---GTACTGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGAG-TCCGT---TA--AACA-------TCACCAAACG-AATA---T-C------AA-------------AGGG-ACGCT-AT---------------------ATCAAASizeHit CountTotal NormTotal
No Reads
droTak1
TA---T-CTCAATA---GGAT---T-----T----------GAATAAA-TA----TA-----------G-------CA---GTTCAGGACATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGAA-TCCGA---AA--TACA-------ACGCCAAATG-ATAT---T-C------AT-------------AGTGACTA---TA---------------AATT---GTGACSizeHit CountTotal NormTotal
No Reads
droEug1
TT---T-ATAAATC---CGAA-----TAAAT---T----------------------------CC---T-------CG---GCAATGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--GAAGATGAG-TTCCA---TA--AACAAC-------CC--G---AA---TAGGAA-AAGG--------------CAAGTG-------AT---------------------CATATTSizeHit CountTotal NormTotal
No Reads
dm3
GT---TTCAAAAGA---ACAT---A-----G---T-------------TGA----CG-----------G-------CG---GTACCGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGAT-CTG--CGAA---------ATACA----CAGT------------------GGTATGGA-------------------------------------------AAAAASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.........................................................................................................................................CCCCTTGTTGCAAACCTCACG.......................................................................................................................211383318.003833180000812391525575194723262538021200100125443742041912019481751200341178309338862546744873117967293206169307567731293112600181040000000000000000092897670978034312285381364151717998332684335212813186711149211568164214785537855131636052651950818672253451698036004708266416698312334323284993111702310401701268511220633029210233935621024916354938524634437026724040331644314224872377989219291294013237234661365218720290925512584910168115622032591941996009801011290000074113001100215244176100555526541941612295108238144219471248422042194693738411514321800001251337220257469109195317832504438392524005291057052309791214023491822836838128688038511771023115870352526001125112294617330119299128553593226543841829721117421239940516654223764252913831243795835986103351168839466211989203174295274817549724735849230313501067425213310222075887268521030
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGC......................................................................................................................221313658.003136582000148464973175112411454611362645912212044491522562311157059142260228631126215169511704417334413925191167137158333356244410009134230000000000000000043742732438241411265231683364910133318628859233422851032225138221171915195584631094248647642466065533365331493525882852358998123049414931289621291164060311242117311438588532616644821751891821087413357932618728044617120225220214291811161334140932631226585020285128819462611562936364370898236524737422730295592477549102203311613011557620000017915211567531420632988968131375389542981010522298091595241691818248223710000184173121342042548684951445133263394155142239152335270774521193396553103982842245613631751121391730022295041051757381062573659524921023595922023815814514339159011923174501729361965180483463040342024991333484037112683525354713242723132040718382856239768858982502887276000
...................................................................................................GTGTGATTTGTAGCAAAGTGAT............................................................................................................................................................221103296.001032960000422110000101000021561139710183635252815414911102514519756701952637176365108401924301504900000000000000000120142901228101476346312117523136125103744447830468286987154208206359111232332931425131120610240325601596451437303191341178877553011692611543098214812778254776834203928311315632642360236438199518058432732075747095731252219326586413563408131706153201722423111883031735712010121892351427240314728214384931708321014988509241640116230204972100783774740118391534901554543310826758854320215212724011392601844918612602451387394656338292251167291491910318517901130140766162060266211351931211129130207510627811252639412043512111201125411955516627021995159629132805313976884011565107420674891131272792836749557576217075175291286181430
...................................................................................................GTGTGATTTGTAGCAAAGTGA.............................................................................................................................................................21172974.007297400008121010326012110125921861744529312651024101376141243711155289586483211564560197370000000000000000056735388549462244200380311080269401117310030185710416150176213305461488191113558321180700360136461022301020010707177669393425849178661454077936372182785376153147824613245015919801272389478734113521997702215612887280141220387043134013406511151231769868539546144355248524022191190401186640118946036726576679619624811000281710362313543164891101265745366231224209145444821125337614105222495118514442013336383638355351675341411658223412561048882130450047355475789815316112428518312443286376153186696216157267344136340015811180109417071383814497179845589528529389036916320521827376840149384423290
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGT......................................................................................................................22132129.003212900005520152521510012001812451561415500000000162416423732341814343421323767191300000000000000000000000272719207275182928444223244325411739458710174110618829871107759610112475156125570410000110201200000000604705434243783756158118555293450000010347439632598120501212361552340114337069117501204120059183701000434700215010595698249815521289336209476331405414129113272000019172838331023614327516626116727522920121123135192826358737100651035544372173130512215342973289117314934411064298446677492275784127337441043312553902565382518734731839110160815963701012894592145285803582897115739721237711500
.........................................................................................................................................CCCCTTGTTGCAAACCTCAC........................................................................................................................20130958.0030958000087933416041222410127141102244412131020283653112112222828119248400017310000000000000000025031118123738914513111810410299202814144626561461972763391182448382173228952231964349509352547334181940610000000727500010000003201181872314101019613141101001612691114129315701115561101213549369330116060216149161320060370100001000000775129542443911102159542211591128958793348155231245000011804712374312415201421441630622546126189132563627534029502891641653959562746152167692415401945907013335552521171214252241722816351326510141292128268650
...................................................................................................GTGTGATTTGTAGCAAAGTG..............................................................................................................................................................20123997.00239970000400000000324610050230641109362751636788483711111721910738252621113140038060000000000000000011935250323133011106153761100271911819314411230011412040712010002238126672061011429167181030172425129143492651576419157113798891222930901082511260813201462049276109105531803201115171029001301500610047516000242152112376025493211711584232296491431471200001042015356625864620312826239286084370106458281401153379147539104414224820733060326194831420623839931425442279559142018101222124710204315020637821470109141013379193184326114139810842115749058971194137661702152873746460
...................................................................................................GTGTGATTTGTAGCAAAGTGATA...........................................................................................................................................................23110031.001003100000000000100000000301000044902102411020411402416811200170190100000000000000000101201002358204207510000000552121300003012400000701112100120200003632161122962511714202715711505540101680815506100451310801004113126315313184411300517031000061391013113713339771291684986101592326710100550902126611803413381021142279843293221730227820244132410130402181339792721242631532192622182481227127391402164511197813493131122861776443201711117991201064165152153224110292462135120881343610
.........................................................................................................................................CCCCTTGTTGCAAACCTCA.........................................................................................................................1917609.007609000000000000000001003201420150248510421002011112002502100028311000000000000000007258495882732116285342878826275106735641021291141588989620464549614734621454608001000103237000000000022100241324015701000183525061342081018741021910270052720672078100103000000000000003018207610930155191072441325000052114223002329112241211200446611432011122902314561208021231534109022000100912111004136472700912100422170
..........................................................................................................................................CCCTTGTTGCAAACCTCACGC......................................................................................................................2114542.00454200001940454131821304004014001220000003713427113012233910610000000000000000000000010108532111495933311341249811823329368129979112632110064010015040510000000020145042972892101220011008821018110622188442132225110131065202310000000000000000000102740147012519110044817145925961496345000024602814201924871115509331312559111327101774241059191696104255608321582007031205020084342751344110222320121000314312160
..........................................................................................................................................CCCTTGTTGCAAACCTCACG.......................................................................................................................2013488.00348800009401141321810200065010010000000048101141782083351014102000000000000000000000005136503362124027113111068200371090851845513180110141701100010101014000000010031404448646371280000006020456032074140278000000324231000200000000200000004221013011831281065919613321720552231632000012012121816131919668072084212684114314141411948169196330185186061830331110500063415141300101945313262263329005104212111313340
...................................................................................................GTGTGATTTGTAGCAAAGTGATT...........................................................................................................................................................2312980.002980000000010000000000000010000000000000000220410030023000000000000000000000000015150407120101210110100000020250600211000100000502020001000000005813057330125713220200510037028130481322000000000001100000000000471003000234781414715385556272144121820600001002147199142093711124581237660724289111160011130013615832443326414510212588879255348753933233022765710810657311674250901440763418591261221539930
....................................................................................................TGTGATTTGTAGCAAAGTGAT............................................................................................................................................................2112322.0023220000000000000000000001310041000000026112011101123531121000010000000000000000004242100001250012002320001013820140000010800101120401000000210500344239115354710011201170220859070116311090270020201432120001043000003100000002913651635403124925749138113311000005200321188241450441764111354114183224112414114543486754124191611151017272316141110183165512301532912524204826102621519839373419564195125101691013671
...................................................................................................GTGTGATTTGTAGCAAAGT...............................................................................................................................................................1912100.002100000000000000000020002020040400000000010000201000214020002000000000000000000054450000001000000000000002000220000000003000000100020108120000021520425022730000171241008007210917602200017520814020250312030030003241311010010005161381148144541051292760000013103656107031022307556615901023471116267020000006752315323121284892125313311287346268222261423123423124108229243221391969101881181214370
.........................................................................................................................................CCCCTTGTTGCAAACCTCACT.......................................................................................................................2111651.00165100000000010002000000000600400000000011001501103201012000000000000000000000002435041912529734202101334000013183241288103153010102950110000000212400000000000110001212300010000091100230001003001010100032013000000000000000000000000021010113351041523242615122200000003007641341150207032021000010014130716958141421210121141101600301000026010010000000000000011000460
....................................................................................................TGTGATTTGTAGCAAAGTGATA...........................................................................................................................................................2211568.001568000000010000000000000100001100000021130002111014354150203400000000000000000000000000300100100000100100010042300000000003201002800020000000000031146030327387452401000000550111221501040000103031100010330000312002000611151031372111494436114521001700003105114960323304340320441108513729462422012336408101553489102618851621938939412411272504254224485532183011610106811575767430
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGA......................................................................................................................2211285.0012850000125481173323103300010410000000000010010006000006160100000000000000000000000454519045824263082153824001314437435785109361352061000212020220000000000000101110110000000001032008120412510208212400130321020100102500000010000000010000474523235970427340041010001010021501100110000002010022646119201121244580500000210000012100110134200010100000101001000001200
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--TC.................................................................................................................2511082.0010820000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000901181000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................G---GTACCGGGCATTTTGGGT..................................................................................................................................................................................1911020.00102000000000000000000000010000000000000021040010111000120000000000000000000000000000000000110000000100000001811101000100011000000000000000000000301402323114131000003000000100000000000000100000000000000000000000030001142310227599214149700100000102204147011013363325491615414121005000000200424063104421241901564112521402101765544177312331318142115534454521581126150
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.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--...................................................................................................................231877.00877000000010000000010000001000000000000100000002001000101000000000000000000000001601474010718110215914111110086222142023257405631602000010102013000000000000200000000001200000000000540200101020411000000026001000000100000002000000000210046202722713559424201134000100000211100001000000120001101051000170419460020200010000201101010166001202100302300120300001010
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.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--...................................................................................................................231856.00856000000002100000140000001500000000000000001010011100000000000000000000000000002333200161108261185025418005193411316234742901416180110001010101000000000000201000010001000000000001001500003204043730100018000100000100000001000000000100129232317321923125212100000010001317021101000320032003235841036032121801400000100011001002310622000025401023200000000212850
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--...................................................................................................................231782.0078200000012301100007000000200000000000000000100000000000000552160000000000000000011111215392464103113032130024001171727570150111002000000000000010000000000001220102001000000000001100000011000020000000010000000000000000000000002100672029248427411717897000010011401210102002002100121110521100000040100001010040001011010200163100311000111000000000110000
...........................................................................................................................................CCTTGTTGCAAACCTCACGC......................................................................................................................201689.0068900000000000003004200000500000000000001001102000102000000000000000000000000003202010020103002003223000001242532650201010010000000000101000000001000000201101000000032071002303001153011121040001001010000000000000000000161010044101616292436217345150000001100013010000110110030000202223263113352310101000100000002020000640200000102001000200000031240
...................................................................................................GTGTGATTTGTAGCAAAGTGAA............................................................................................................................................................221687.0068700000000000000000000100000000000001000000110000001010000000000000000000000003122010003232004000000000010000090110100000001000000000000010000410111101110214202222360000001210234025001200000000010210000000000013000000832002018513920136130352010010000101011000200001203422029544210413010025115351239201101111290500010141684689414162495110330011321620
.........................................................................................................................................CCCCTTGTTGCAAACCTC..........................................................................................................................181615.006150000000000000000520001010000000101000000000100000000000022100000000000000000911671107314221103202585003600576512645721214116603010000001900004800000000000000000000000000000000020010010002100000003000000000020000000000000201001040304021013100000000000000010100000400101100221435000000020800000100000000000000030000000000000000000000000110
.........................................................................................................................................CCCCTTGTTGCAAACCTCACC.......................................................................................................................211610.006100000100000000300000000050000000000011000021100010125020000000000000000000000011125218000112302150100000010810244223000015000000000010000000000000020001230212000000000013051210000100000000000003001300000010000000000000000000020986117151210000000000101014011022045110120001110015401356210141095130420200131000204020040000100200000000300101000003100
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...................................................................................................GTGTGATTTGTAGCAAAGTGT.............................................................................................................................................................211491.00491000000000000000000000000000000000000100010100000110100000000000000000000000001100000000020050010100000232400000000204100000000010001100000000000130210100300010010000562022200401440300000001000001000000000000000050200010226211301520000000003351030023000000432020651252020000000008163481313200160000021113120320737541473711052310511513860
....................................................................................................TGTGATTTGTAGCAAAGTGA.............................................................................................................................................................201476.0047600000000000000000000000100200000000001000000000000000000000000000000000000001200020000510000000000000104420000000000000000010003200000000000000000010100000131100600032011013210507000120010110001000000001010000102500400240202081233000030122211226113401022121240011350222702110028431791492343615305024721313253434513104352327402137022210
...................................................................................................GTGTGATTTGTAGCAAAG................................................................................................................................................................181465.004650000000000000000000010000101000000000000000001000002000010000000000000000000108390000003300310051000001100100300000001000000000000004200000100100010403000000132500200170231014005200301001000000000000111361000000006000131015401112715300000111011200101010010001314111523221130000000101513211136817002101041433001302520012003002035330113130000
.........................................................................................................................................CCCCTTGTTGCAAACCTCAT........................................................................................................................201464.0046400000001000002000000000200000000000000000000000000000000000000000000000000004233000100292150020111200000061681464122000034000000000000000000000000000000000000000000003000300300001000000000014100000000000000000000000000000100025010302411400000010000100000010000100000000000100000000000000000000000000000010000000000000000001000100000000
...................................................................................................GTGTGATTTGTAGCAAAGTGATG...........................................................................................................................................................231415.004150000000000000000000000000000000000000000010000000000000000000000000000000000000000000000002000100000000110230000000000000000000000002000001021000000010000000000001000000200020003000000001010100001000000010040000601200621210332214000020000213200109222101103152031500500000000008113504462103126030190110019116625936244521131771040612126110
...........................................................................................................................................CCTTGTTGCAAACCTCACG.......................................................................................................................191410.0041000000000000000000000000000000000000120000010000000110000000000000000000000001410030003561011001100011402173628112101000000000000000000000000000000000101322000000003030070100000202001100020000100200001000000000000000005000119118178271342720000101000103000001010002001001000211193800014150200100001000000100000081200000000000100000010011000
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.................................................................................GTACCGGGCATTTTGGGT..................................................................................................................................................................................181401.004010000000000000000000000000000000000003014000100000000100000000000000000000000000000001020000000000000000238002001010000000000000000000000000002012102001601000000091000000000100000200000000101000000210000000000001040000370013000500500000231021320011035041543322003313012000000002350300003200222043607170121223717030502300310310011442010
..................................................................................................TGTGTGATTTGTAGCAAAGTGAT............................................................................................................................................................231379.00379000010000000000000000000000000000000020000210000001000000000000000000000000001100000101000100000000000010200000000001000001100011000000000000000022111000001000300000010200020000010000103202100000110000001000000020140212621165513100200000100021042000000000000215211273212180442233461005443401501413216606467269733916620034452202112100
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............................................................................................................................................CTTGTTGCAAACCTCACGC......................................................................................................................191356.003560000000000000000000011020001000000010000100000001000000000000000000000000000110000053011102000012000100357180100113000000000000001000000000010160235515217000000000000210111142400300000001000100000000000000000000552110040201303014100001000001000000010012102000000234253316012212903101201302014002000011558152201300441001010000011010
........................................................................................................................................TCCCCTTGTTGCAAACCTCACGC......................................................................................................................231346.003460000001021000000000000030010000000000000000000000200000000000000000000000000010015081027401200204200339019132022622011630000000000000000000000000000001000000000000000000000000011010010003000100000000000000000000000000002002471213261217141023500001000001010002000000001000001110202000001121000000000000100000000010000000000000000010000000000
............................................................................................................................................CTTGTTGCAAACCTCACG.......................................................................................................................181323.0032300000000000000000000000000000000000001001000001000100000000000000000000000004925000002630010000110020011391041600001000000000000000000100000022106074673000100000000008100010022200100000200001000000000000000000000753020042210011100100000000000000000120100000101000111141926145255121620010033000000201010044222110210000000000100120120
...................................................................................................GTGTGATTTGTAGCAAAGTGC.............................................................................................................................................................211320.00320000010000000000000000000000000000000000002300010235000000000000000000000000000000000000000120000000000011000000000001300000000030001000000002210001000203100010001000120010002000400010000000010000000100000000000512000000000102000000000000115710000100110200030001653141130000001872620061010052822274014430161622301420200111001114230
...................................................................................................GTGTGATTTGTAGCAAAGTGATATG.........................................................................................................................................................251311.0031100000000000000000000003000000000000300000040003022011000301000000000000000000000000001000000000000000000000000000030000000000000000000000010410010212010020000000000000000000000000000000000000000000000000400000002020011220211100000000001000000000000000000000001003000000000000000200002300021011010020002145480100502500202404114102100
..................................................................................................TGTGTGATTTGTAGCAAAGTGA.............................................................................................................................................................221293.0029300000000000000000000000000000000000200000000000120000000010000000000000000002000000000010000000000000100000000000000000000000000000000000000010000010020000001010000000000000001000100001000000000000000000200000000411000020514141001000000001012102102200113003102101451121701061859402652631313003282742050564465215823008302004249100
...................................................................................................GTGTGATTTGTAGCAAAGTGAC............................................................................................................................................................221249.002490000000000000000000000000000000000000000000000000030000000000000000000000000010000000000000100000000000010000000010000000010000000000000000000000000000000000000000000301000010011200010000000050000000000000000000720111020103212030100000000000101010211000001242001251003010000001871741425600021324131700170374403631230322010120310320
.........................................................................................................................................CCCCTTGTTGCAAACCTCAA........................................................................................................................201240.002400000200000010000000010029001000000000000000200000000000000000000000000000000020010407021101011010380010101694000000000000000000000000000000000000000000000000000000900004000010000000000000000000000010000000000000000000006184010335121001100000000000000000100000000000000000002711412100000000010000100000000010011000000000000000000000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGTT--...................................................................................................................231218.0021800000000000002000100000120000000000000000010000001000000000000000000000000000100210000171000002112000100917151236000030001000000000100000000000020000000000000000000400001100002100001300000042010000100000000000000002000001410101314300110000000021023130000000310000001030110010102100400010010010000100100103200000101010000210000011450
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCC--...................................................................................................................221214.002140000000000000000000000000000100000000100000000000000000010000000000000000000112100000010000000100000000234110100002000000000000000000000000000000000100020000000000000000000000112000000000000000000000000000000000001000401210544161231542000000000000000000000000001100000101000000000000001101110001001000000140000000000100000100000000100
..........................................................................................................................................CCCTTGTTGCAAACCTCAC........................................................................................................................191210.0021000000000000000000000000000100000000000000000010001100000000000000000000000001105000000410000001030000001010195400000200000000000101000000000000000001100001000000000610102000011000010000000120000000000000000000000001202000131232156147214100000000010000020000100000001001010100140012010100000000000000000000012000000100000100000100000010
...................................................................................................GTGTGATTTGTAGCAAAGTGAATC..........................................................................................................................................................241204.00204000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000013271000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGAT--C..................................................................................................................241177.00177000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000014828000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................GTGTGATTTGTAGCAAAGTGATC...........................................................................................................................................................231150.0015000000000000000000000000000000000000000000000000000100000000000000000000000001101000000100000000000000000000000000000000000000000000010000000010000000000100000020000000010000100010000000000001000000000000000000000100002010000213111919000100000200000100000200001000101010000000011031210003000401300190010024024610411112141110112130
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCA--...................................................................................................................221150.00150000000000000000000000000000000000000000000000000000000000000000000000000000011010020017310200102100001043320001000000000000000001000000000000000000000000000000200000100020112101330010004000000000000000000000000000000017222961270621000000000010200000010000000000010000000000000000000110100000000000000131000100000100000000000000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGG......................................................................................................................221140.001400000000000000100100000000000000000000000000000010010000000000000000000000000030221010003100101001000080043300001010000000000000000000000000001000000000010000000100010100021000042300004040000000000000000000000001000000120022250003000000010000100001000000001000001110102510212401221000110100000100101210000000200000000000000011220
...................................................................................................GTGTGATTTGTAGCAAAGTGATAA..........................................................................................................................................................241128.0012800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110020000000000000000000000000000200011000050010000000000000000000000000000010000000000000000000000020020001113611300001100000000000000000000000001000122211001010000000210000210121012603000031021185111431100000000011030
...................................................................................................GTGTGATTTGTAGCAAAGTGAG............................................................................................................................................................221125.001250000000000000000000000000200000000000000000001000000000000000000000000000000001000000001400000000000200000000000000000000000000000000000000111000100000000100000000000101120040173100000010000100000000000010000001100000000010001210000000000001000000000000000000002100100000000003584235310001211010702300000120012000001100020100010
...................................................................................................GTGTGATTTGTAGCAAAGTGATAATC........................................................................................................................................................261120.0012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000008040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................GTGTGATTTGTAGCAAAGTT..............................................................................................................................................................201118.001180000000000000000000000000000000000000010000000001000000000000000000000000000011000000000000000000000000000000000000000000000000100000000000000000030010000000001000003170200000000000000000000000000000000000000000000200000010000000100000000101920100200540403011002170230000000000303111120100510000010010000200100100002200000001030
...........................................................................................................................................CCTTGTTGCAAACCTCACGCA--...................................................................................................................211116.001160000000000000000000000000000000000000000000000000000000000000000000000000000011010000043000101001000030215000000000010000000000000000000000011000100000000010001000002100330130105010000000000000000000000000000000000000313863520570000010000000000000001000000100000000000000000000000001000000000000000150010000100000000000000000020
...................................................................................................GTGTGATTTGTAGCAAAGTGG.............................................................................................................................................................211111.00111000000000000000000000000000000000000100000100000110000000000000000000000000000000000000100010000000001000010100000000000000000010000100000001000000000000000100000200000100000003700000000000010000000000000000000010200000000000030000000000002100100210000000210100111020000000000044301041001300000020060010313411912100010000100220
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...................................................................................................GTGTGATTTGTAGCAAAGTGATATC.........................................................................................................................................................251110.0011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000006842000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................TCCCCTTGTTGCAAACCTCAC........................................................................................................................211100.001000000000000000000000000000000000000000000002000000000000000000000000000000000000000001014000000011000000612957200001000000000000000000000000001010000000030000000000000000000000000000000001000000000000000000000000000000058335722100100000000000100010000000000000000100000010000000000000000000000000000000001000000000000000000000000
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCT--...................................................................................................................22195.00950000000000000000000000000000000000000000000000000000000000000000000000000000100100000020000000011000000103503000010000000002000000000000000001000000100000000000000001000000020000100000040000000000000000000000000000100123427263104100000010000020000000000000000000101210000002000000000000000100000000012000000000001000000000200010
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.........................................................................................................................................CCCCTTGTTGCAAACCTCACTT......................................................................................................................22177.00770000000000000000000010020030000000002100010100000100000000000000000000000000000001111010000000000000000109200000001000000000000000000000000000000000010000100000300011000000000000000000000000000000000000000000000010000001010402000000001000000001100000000000000000000000120002001410101101000000000001000000000000000000100100000010
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--A..................................................................................................................24174.00740000000000000000000000000000000000000000000000000000000093300000000000000000000000000000000000000000000000100001000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000924321573000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000
droSim2
CT---A-CTAGAGA---ACAT---T-----T---T-------------TGA----TG-----------G-------CG---GTACCGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGAT-CTG--AGAA---------ATACA----CAGT------------------GATATGAA-------------------------------------------ACAAASizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
...................................................................................................GTGTGATTTGTAGCAAAGTGAT............................................................................................................................................................2216017.00601745213215334423325498485163312753952145138314
.........................................................................................................................................CCCCTTGTTGCAAACCTCACG.......................................................................................................................2115486.00548647080169471148179730717654482662401110213000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGC......................................................................................................................2214981.0049815757525538313321883785453538529721164159000
...................................................................................................GTGTGATTTGTAGCAAAGTGA.............................................................................................................................................................2112476.0024761062516173483082451964664561071117156002
.........................................................................................................................................CCCCTTGTTGCAAACCTCAC........................................................................................................................2012028.002028651716366809355870465732727000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--...................................................................................................................2311854.0018542190738110110110000000
...................................................................................................GTGTGATTTGTAGCAAAGTG..............................................................................................................................................................2011410.001410521611518635516393215193713245000
...................................................................................................GTGTGATTTGTAGCAAAGTGATA...........................................................................................................................................................2311053.0010531336214831918147120248111261044000
.........................................................................................................................................CCCCTTGTTGCAAACCTCA.........................................................................................................................191780.00780133172814285113917200000
.........................................................................................................................................CCCCTTGTTGCAAACCTC..........................................................................................................................181747.00747811027244842119000000
....................................................................................................TGTGATTTGTAGCAAAGTGATA...........................................................................................................................................................221276.00276371622013595444249511000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGT......................................................................................................................221269.002691746100084231412624330000
...................................................................................................GTGTGATTTGTAGCAAAG................................................................................................................................................................181265.002653196010010023248000000
...................................................................................................GTGTGATTTGTAGCAAAGT...............................................................................................................................................................191234.002341919245066176151814121000
....................................................................................................TGTGATTTGTAGCAAAGTGAT............................................................................................................................................................211227.00227112067202540475010225000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGA......................................................................................................................221223.00223703100482790363008000
...................................................................................................GTGTGATTTGTAGCAAAGTGATT...........................................................................................................................................................231192.00192341414100231453265008000
..........................................................................................................................................CCCTTGTTGCAAACCTCACGC......................................................................................................................21185.008550127146111681104000
...................................................................................................GTGTGATTTGTAGCA...................................................................................................................................................................15181.008100000040195512000000
..........................................................................................................................................CCCTTGTTGCAAACCTCACG.......................................................................................................................20170.0070000380363324812000
...................................................................................................GTGTGATTTGTAGCAAAGTGAA............................................................................................................................................................22161.006112000044161721410000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--...................................................................................................................23152.005230100091114120011000
.........................................................................................................................................CCCCTTGTTGCAAACC............................................................................................................................16142.0042000000001041000000
...................................................................................................GTGTGATTTGTAGCAAAGTGT.............................................................................................................................................................21141.0041500000322100028000
....................................................................................................TGTGATTTGTAGCAAAGTGA.............................................................................................................................................................20138.003831013462731007000
....................................................................................................TGTGATTTGTAGCAAAGTGATAA..........................................................................................................................................................23135.00350000003220100000000
....................................................................................................TGTGATTTGTAGCAAAGTGATAAA.........................................................................................................................................................24135.00350000005513120000000
...................................................................................................GTGTGATTTGTAGCAAAGTGAC............................................................................................................................................................22130.0030165400001013000000
...................................................................................................GTGTGATTTGTAGCAAAGTGG.............................................................................................................................................................21123.0023183100010000000000
..................................................................................................TGTGTGATTTGTAGCAAAGTGAT............................................................................................................................................................23123.002340101034550000000
...................................................................................................GTGTGATTTGTAGCAAAGTGATAAA.........................................................................................................................................................25122.002200000070861000000
..................................................................................................TGTGTGATTTGTAGCAAAGTGA.............................................................................................................................................................22121.002111000038420011000
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCC--...................................................................................................................22120.0020100071200000000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--...................................................................................................................23120.002071200021202201000
............................................................................................................................................CTTGTTGCAAACCTCACG.......................................................................................................................18119.0019000000140014000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--A..................................................................................................................24118.0018000071100000000000
............................................................................................................................................CTTGTTGCAAACCTCACGC......................................................................................................................19117.001700020052015011000
.........................................................................................................................................CCCCTTGTTGCAAAC.............................................................................................................................15117.0017000000200015000000
...................................................................................................GTGTGATTTGTAGCAAAGTGATAA..........................................................................................................................................................24116.001600000011750011000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACA.......................................................................................................................21116.001610000035511000000
...................................................................................................GTGTGATTTGTAGCAAAGTGATG...........................................................................................................................................................23116.001631400041102000000
...................................................................................................GTGTGATTTGTAGCAA..................................................................................................................................................................16115.001500000040434000000
...................................................................................................GTGTGATTTGTAGCAAA.................................................................................................................................................................17114.001400000024143000000
.........................................................................................................................................CCCCTTGTTGCAAACCT...........................................................................................................................17114.0014000000100013000000
...........................................................................................................................................CCTTGTTGCAAACCTCACGCC--...................................................................................................................21114.001441016200000000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGTT--...................................................................................................................23114.001432020000000007000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACT.......................................................................................................................21114.001441120013001001000
.............................................................................................................................................TTGTTGCAAACCTCACG.......................................................................................................................17113.0013000000000012001000
........................................................................................................................................TCCCCTTGTTGCAAACCTCACG.......................................................................................................................22113.001300021010203310000
...............................................................................................................................................GTTGCAAACCTCACG.......................................................................................................................15113.0013000000000013000000
...........................................................................................................................................CCTTGTTGCAAACCTCACG.......................................................................................................................19112.001201023011112000000
....................................................................................................TGTGATTTGTAGCAAAGTGATATG.........................................................................................................................................................24112.001200400041020100000
....................................................................................................TGTGATTTGTAGCAAAGTGATT...........................................................................................................................................................22112.001240000001610000000
...................................................................................................GTGTGATTTGTAGCAAAGTGATC...........................................................................................................................................................23111.001140300020110000000
...........................................................................................................................................CCTTGTTGCAAACCTCACGC......................................................................................................................2019.00900012002010300000
..........................................................................................................................................CCCTTGTTGCAAACCTCAC........................................................................................................................1919.00900013400100000000
.............................................................................G---GTACCGGGCATTTTGGGT..................................................................................................................................................................................1919.00900000000008100000
........................................................................................................ATTTGTAGCAAAGTGAT............................................................................................................................................................1718.00800000000008000000
.............................................................................................................................................TTGTTGCAAACCTCACGC......................................................................................................................1818.00810100000004002000
....................................................................................................TGTGATTTGTAGCAAAGTGATAAAA........................................................................................................................................................2518.00800000001520000000
...................................................................................................GTGTGATTTGTAGCAAAGTGTA............................................................................................................................................................2218.00800000001000007000
.....................................................................................................GTGATTTGTAGCAAAGTGAT............................................................................................................................................................2017.00700001011013000000
...................................................................................................GTGTGATTTGTAGCAAAGTGAG............................................................................................................................................................2217.00710000001113000000
....................................................................................................TGTGATTTGTAGCAAAGTG..............................................................................................................................................................1917.00700021111010000000
..............................................................................................................................................TGTTGCAAACCTCACG.......................................................................................................................1616.00600000000015000000
..........................................................................................................................................CCCTTGTTGCAAACCTCACGT......................................................................................................................2116.00600020000002200000
..................................................................................................TGTGTGATTTGTAGCAAAGTGATA...........................................................................................................................................................2416.00600000032100000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGG......................................................................................................................2216.00630200000001000000
..................................................................................................TGTGTGATTTGTAGCAAAGTG..............................................................................................................................................................2116.00600000014010000000
.......................................................................................................GATTTGTAGCAAAGTGAT............................................................................................................................................................1815.00500000000005000000
....................................................................................................TGTGATTTGTAGCAAAGT...............................................................................................................................................................1815.00500001100003000000
..........................................................................................................................................CCCTTGTTGCAAACCTCA.........................................................................................................................1815.00500010400000000000
.....................................................................................................GTGATTTGTAGCAAAGTGA.............................................................................................................................................................1914.00400000001003000000
...........................................................................................................................................CCTTGTTGCAAACCTCACGCA--...................................................................................................................2114.00400020002000000000
........................................................................................................................................TCCCCTTGTTGCAAACCTCACGC......................................................................................................................2314.00400001001100100000
........................................................................................................................................TCCCCTTGTTGCAAACCTCA.........................................................................................................................2014.00400001300000000000
....................................................................................................TGTGATTTGTAGCAAAGTGATAT..........................................................................................................................................................2314.00400000100110001000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGAA--...................................................................................................................2314.00420000000020000000
.........................................................................................................TTTGTAGCAAAGTGAT............................................................................................................................................................1613.00300000000003000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCAA........................................................................................................................2013.00300010000110000000
........................................................................................................................................TCCCCTTGTTGCAAACCTCACGCC--...................................................................................................................2413.00300003000000000000
...................................................................................................GTGTGATTTGTAGCAAAGTGC.............................................................................................................................................................2113.00320000010000000000
........................................................................................................ATTTGTAGCAAAGTGA.............................................................................................................................................................1613.00300000000003000000
...........................................................................................................................................CCTTGTTGCAAACCTCAC........................................................................................................................1813.00300001200000000000
...................................................................................................GTGTGATTTGTAGCAAAGTGATAAAA........................................................................................................................................................2613.00300000010110000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACC.......................................................................................................................2113.00300010001000100000
.........................................................................................................................................CCCCTTGTTGCAAACCTCAT........................................................................................................................2013.00330000000000000000
....................................................................G-------CG---GTACCGGGCATTTTGGGT..................................................................................................................................................................................2113.00300000000003000000
...................................................................................................GTGTGATTTGTAGCAAAGTT..............................................................................................................................................................2013.00302000000000001000
...................................................................................................GTGTGATTTGTAGCAAAGTGATATG.........................................................................................................................................................2513.00300000001100010000
...................................................................................................GTGTGATTTGTAGCAAAA................................................................................................................................................................1813.00300000010020000000
..............................................................................................................................................TGTTGCAAACCTCACGT......................................................................................................................1713.00300000000003000000
................................................................................................................................................TTGCAAACCTCACGC......................................................................................................................1512.00200000000002000000
...................................................................................................GTGTGATTTGTAGCAAAGTA..............................................................................................................................................................2012.00200000001000001000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCG--GT.................................................................................................................2512.00200000000002000000
........................................................................................................................................TCCCCTTGTTGCAAACCT...........................................................................................................................1812.00200002000000000000
....................................................................................................TGTGATTTGTAGCAAAGTGATG...........................................................................................................................................................2212.00201000000001000000
...................................................................................................GTGTGATTTGTAGCAAAGTGATATGTAT......................................................................................................................................................2812.00200000000000002000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCG--...................................................................................................................2312.00210000000100000000
..........................................................................................................................................CCCTTGTTGCAAACCTCACA.......................................................................................................................2012.00200010000100000000
....................................................................................................TGTGATTTGTAGCAAAGTGAA............................................................................................................................................................2112.00200000000110000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGAT--T..................................................................................................................2412.00200000000000002000
................................................................................................GGTGTGTGATTTGTAGCAAAGTG..............................................................................................................................................................2312.00200000002000000000
......................................................................................................TGATTTGTAGCAAAGTGATA...........................................................................................................................................................2012.00211000000000000000
...................................................................................................GTGTGATTTGTAGCAAAGTGATAT..........................................................................................................................................................2412.00200000100000001000
...................................................................................................GTGTGATTTGTAGCAAAGTGATATGTA.......................................................................................................................................................2712.00200000001000010000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACTT......................................................................................................................2212.00200020000000000000
.............................................................................................................................................TTGTTGCAAACCTCACGT......................................................................................................................1812.00200000000001001000
...................................................................................................GTGTGATTTGTAGCAAAGTGATTAA.........................................................................................................................................................2512.00200000000200000000
...........................................................................................................................................CCTTGTTGCAAACCTCACGCC--T..................................................................................................................2212.00220000000000000000
............................................................................CG---GTACCGGGCATTTTGGGT..................................................................................................................................................................................2012.00200000000002000000
...................................................................................................GTGTGATTTGTAGCAAAGTGATTC..........................................................................................................................................................2412.00200000000000002000
.......................................................................................................................................ATCCCCTTGTTGCAAACCT...........................................................................................................................1912.00200000200000000000
...........................................................................................................................................CCTTGTTGCAAACCTCACGCC--C..................................................................................................................2212.00220000000000000000
...............................................................................................................................................GTTGCAAACCTCACGC......................................................................................................................1612.00200000000002000000
.................................................................................GTACCGGGCATTTTGGGT..................................................................................................................................................................................1812.00200000000002000000
...............................................................................................................................................GTTGCAAACCTCACGT......................................................................................................................1622.00400000000004000000
...................................................................................................GTGTGATTTGTAGCAAAGTGACT...........................................................................................................................................................2312.00200100000010000000
...................................................................................................GTGTGATTTGTAGCAAAAA...............................................................................................................................................................1931.67500000000000005000
...................................................................................................GTGTGATTTGTAGCAAT.................................................................................................................................................................1721.50300000000120000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCATT.......................................................................................................................2111.00100000000001000000
...................................................................................................GTGTGATTTGTAGCAAAGTGATGGT.........................................................................................................................................................2511.00100000000001000000
.......................................................................................................GATTTGTAGCAAAGTGATA...........................................................................................................................................................1911.00100000000001000000
.......................................................................................................GATTTGTAGCAAAGTGA.............................................................................................................................................................1711.00100000000001000000
...........................................................................................................................................CCTTGTTGCAAACCTCACGCT--G..................................................................................................................2211.00100010000000000000
droSec2
CT---G-CTAGAGA---ACAT---T-----T---T-------------TGA----TG-----------G-------CG---GTACCGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGATGAT-CTG--CGAA---------ATACA----CAGT------------------GTTTTGGA-------------------------------------------A--CASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.........................................................................................................................................CCCCTTGTTGCAAACCTCACG.......................................................................................................................2114137.004137246165675936
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGC......................................................................................................................2213734.003734277547397515
...................................................................................................GTGTGATTTGTAGCAAAGTGAT............................................................................................................................................................2211339.001339250588143358
...................................................................................................GTGTGATTTGTAGCAAAGTGA.............................................................................................................................................................211840.0084014931790284
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGT......................................................................................................................221685.00685119101114351
...................................................................................................GTGTGATTTGTAGCAAAGTG..............................................................................................................................................................201629.0062912315312341
..........................................................................................................................................CCCTTGTTGCAAACCTCACGC......................................................................................................................211252.002522311614
.........................................................................................................................................CCCCTTGTTGCAAACCTCAC........................................................................................................................201210.0021015412827
..........................................................................................................................................CCCTTGTTGCAAACCTCACG.......................................................................................................................201210.0021018121314
...................................................................................................GTGTGATTTGTAGCAAAGTGATA...........................................................................................................................................................231141.0014121662628
....................................................................................................TGTGATTTGTAGCAAAGTGAT............................................................................................................................................................211107.0010730202532
...................................................................................................GTGTGATTTGTAGCAAAGTGATT...........................................................................................................................................................23171.00711830617
...................................................................................................GTGTGATTTGTAGCAAAGT...............................................................................................................................................................19157.0057420429
.........................................................................................................................................CCCCTTGTTGCAAACCTCA.........................................................................................................................19154.00541341324
....................................................................................................TGTGATTTGTAGCAAAGTGATA...........................................................................................................................................................22148.00481413156
.........................................................................................................................................CCCCTTGTTGCAAACCTCACT.......................................................................................................................21142.004239012
....................................................................................................TGTGATTTGTAGCAAAGTGA.............................................................................................................................................................20140.0040118318
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGA......................................................................................................................22136.003633201
.............................................................................G---GTACCGGGCATTTTGGGT..................................................................................................................................................................................19133.0033131910
...................................................................................................GTGTGATTTGTAGCAAAGTGT.............................................................................................................................................................21129.0029215012
............................................................................................................................................CTTGTTGCAAACCTCACGC......................................................................................................................19120.002018011
..........................................................................................................................................CCCTTGTTGCAAACCTCACGT......................................................................................................................21120.002010244
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--...................................................................................................................23117.001713112
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--...................................................................................................................23116.001614011
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGTT--...................................................................................................................23115.00156207
...........................................................................................................................................CCTTGTTGCAAACCTCACGC......................................................................................................................20115.001514001
....................................................................................................TGTGATTTGTAGCAAAGTG..............................................................................................................................................................19113.001311101
........................................................................................................................................TCCCCTTGTTGCAAACCTCACG.......................................................................................................................22111.00119110
............................................................................................................................................CTTGTTGCAAACCTCACG.......................................................................................................................18111.00118111
..........................................................................................................................................CCCTTGTTGCAAACCTCAC........................................................................................................................19110.00109001
..................................................................................................TGTGTGATTTGTAGCAAAGTGAT............................................................................................................................................................23110.00102224
.............................................................................................................................................TTGTTGCAAACCTCACGC......................................................................................................................1819.0099000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--...................................................................................................................2319.0099000
...........................................................................................................................................CCTTGTTGCAAACCTCACG.......................................................................................................................1919.0097020
...................................................................................................GTGTGATTTGTAGCAAAGTGATG...........................................................................................................................................................2318.0080215
.........................................................................................................................................CCCCTTGTTGCAAACCTCACC.......................................................................................................................2118.0087001
...................................................................................................GTGTGATTTGTAGCAAAGTGAA............................................................................................................................................................2218.0086110
..................................................................................................TGTGTGATTTGTAGCAAAGTGA.............................................................................................................................................................2216.0062121
...................................................................................................GTGTGATTTGTAGCAAAGTGATATG.........................................................................................................................................................2516.0060411
...................................................................................................GTGTGATTTGTAGCAAAG................................................................................................................................................................1816.0062004
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCA--...................................................................................................................2215.0055000
...........................................................................................................................................CCTTGTTGCAAACCTCACGCA--...................................................................................................................2115.0055000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACTT......................................................................................................................2214.0043100
.....................................................................................................GTGATTTGTAGCAAAGTGAT............................................................................................................................................................2014.0043001
........................................................................................................................................TCCCCTTGTTGCAAACCTCACGC......................................................................................................................2314.0044000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACA.......................................................................................................................2114.0043001
.....................................................................................................GTGATTTGTAGCAAAGTGA.............................................................................................................................................................1913.0031011
...................................................................................................GTGTGATTTGTAGCAAAGTAT.............................................................................................................................................................2113.0031200
..........................................................................................................................................CCCTTGTTGCAAACCTCACGA......................................................................................................................2113.0033000
....................................................................................................TGTGATTTGTAGCAAAGTGATT...........................................................................................................................................................2213.0031101
...................................................................................................GTGTGATTTGTAGCAAAGTGATAAA.........................................................................................................................................................2513.0031110
..................................................................................................TGTGTGATTTGTAGCAAAGTG..............................................................................................................................................................2113.0030102
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCC--...................................................................................................................2213.0033000
...................................................................................................GTGTGATTTGTAGCAAAGTC..............................................................................................................................................................2013.0030003
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGG......................................................................................................................2213.0032001
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCT--...................................................................................................................2213.0032001
.................................................................................GTACCGGGCATTTTGGGT..................................................................................................................................................................................1813.0030030
...........................................................................................................................................CCTTGTTGCAAACCTCACGT......................................................................................................................2012.0021001
....................................................................................................TGTGATTTGTAGCAAAGTGATATG.........................................................................................................................................................2412.0021100
............................................................................CG---GTACCGGGCATTTTGGGT..................................................................................................................................................................................2012.0021001
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGTT--T..................................................................................................................2412.0021010
.....................................................................................................GTGATTTGTAGCAAAGTG..............................................................................................................................................................1812.0022000
...................................................................................................GTGTGATTTGTAGCAAAGTGATAA..........................................................................................................................................................2412.0021100
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--T..................................................................................................................2412.0021010
...........................................................................................................................................CCTTGTTGCAAACCTCACGCC--...................................................................................................................2112.0022000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACAT......................................................................................................................2212.0022000
..........................................................................................................................................CCCTTGTTGCAAACCTCACT.......................................................................................................................2012.0022000
...........................................................................................................................................CCTTGTTGCAAACCTCACGCC--A..................................................................................................................2212.0020002
.........................................................................................................................................CCCCTTGTTGCAAACCTC..........................................................................................................................1812.0021001
.........................................................................................................................................CCCCTTGTTGCAAACCTCAA........................................................................................................................2012.0022000
..........................................................................................................................................CCCTTGTTGCAAACCTCACGTT--...................................................................................................................2212.0022000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCG--...................................................................................................................2312.0022000
....................................................................................................TGTGATTTGTAGCAAAGTGATAA..........................................................................................................................................................2311.0010010
.................................................................................................GTGTGTGATTTGTAGCAAAGTGT.............................................................................................................................................................2311.0010001
...........................................................................................................................................CCTTGTTGCAAACCTCACGCT--TT.................................................................................................................2311.0011000
...................................................................................................GTGTGATTTGTAGCAAAGTGATC...........................................................................................................................................................2311.0010100
.....................................................................................................GTGATTTGTAGCAAAGTGATA...........................................................................................................................................................2111.0011000
..........................................................................................................................................CCCTTGTTGCAAACCTCACC.......................................................................................................................2011.0011000
............................................................................................................................................CTTGTTGCAAACCTCACGCC--A..................................................................................................................2111.0011000
...................................................................................................GTGTGATTTGTAGCAAAGTT..............................................................................................................................................................2011.0010100
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--A..................................................................................................................2411.0011000
...........................................................................................................................................CCTTGTTGCAAACCTCACGCA--C..................................................................................................................2211.0011000
.......................................................................................................GATTTGTAGCAAAGTGAT............................................................................................................................................................1811.0011000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGTA--T..................................................................................................................2411.0011000
.......................................................................................................................................ATCCCCTTGTTGCAAACCTCACGC......................................................................................................................2411.0010001
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--AT.................................................................................................................2511.0010010
...........................................................................................................................................CCTTGTTGCAAACCTCACGTT--...................................................................................................................2111.0011000
.......................................................................................................................................ATCCCCTTGTTGCAAACCTCACG.......................................................................................................................2311.0011000
droYak3
CT---T-CTAAATA---ACAT---T-----T---T-------------TCA----TG-----------G-------CG---TTACTGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--AAAGGTGAC-CTG--CGAA---------ATACA----CAGG------------------GATATGTAAAAAAGAC---A----GTGC-------------------------TTTSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGC......................................................................................................................22117535.001753521872119440232155253241010
.........................................................................................................................................CCCCTTGTTGCAAACCTCACG.......................................................................................................................2116807.00680710542851534342189312400000
..........................................................................................................................................CCCTTGTTGCAAACCTCACGC......................................................................................................................211757.0075716965160300000
.........................................................................................................................................CCCCTTGTTGCAAACCTCAC........................................................................................................................201456.004561719822216840000
...................................................................................................GTGTGATTTGTAGCAAAGTGAT............................................................................................................................................................221423.00423859095231127920000
..........................................................................................................................................CCCTTGTTGCAAACCTCACG.......................................................................................................................201378.0037803491681400000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGT......................................................................................................................221323.0032331517232934220000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--...................................................................................................................231251.0025167315934510000
...................................................................................................GTGTGATTTGTAGCAAAGTGA.............................................................................................................................................................211185.0018519511313536480000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--...................................................................................................................231121.001217610620000000
............................................................................................................................................CTTGTTGCAAACCTCACGC......................................................................................................................19174.00740433010000000
...................................................................................................GTGTGATTTGTAGCAAAGTGATA...........................................................................................................................................................23163.00632871750150000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGA......................................................................................................................22161.00611262922100000
...........................................................................................................................................CCTTGTTGCAAACCTCACGC......................................................................................................................20161.00610421700110000
.............................................................................................................................................TTGTTGCAAACCTCACGC......................................................................................................................18160.00600332610000000
...................................................................................................GTGTGATTTGTAGCAAAGTG..............................................................................................................................................................20147.00470136639100000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--...................................................................................................................23147.00470271910000000
...................................................................................................GTGTGATTTGTAGCAAAGTGATT...........................................................................................................................................................23147.0047972160130000
...........................................................................................................................................CCTTGTTGCAAACCTCACG.......................................................................................................................19141.0041036500000000
....................................................................................................TGTGATTTGTAGCAAAGTGAT............................................................................................................................................................21138.0038115702760000
.........................................................................................................................................CCCCTTGTTGCAAACCTCA.........................................................................................................................19127.0027331811100000
........................................................................................................................................TCCCCTTGTTGCAAACCTCACGC......................................................................................................................23125.0025019600000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACT.......................................................................................................................21124.0024011800410000
..........................................................................................................................................CCCTTGTTGCAAACCTCAC........................................................................................................................19123.0023021200000000
............................................................................................................................................CTTGTTGCAAACCTCACG.......................................................................................................................18122.0022012720010000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGG......................................................................................................................22122.0022021100000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--T..................................................................................................................24121.0021071300010000
....................................................................................................TGTGATTTGTAGCAAAGTGATA...........................................................................................................................................................22120.002015631040000
........................................................................................................................................TCCCCTTGTTGCAAACCTCACG.......................................................................................................................22120.0020013700000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACA.......................................................................................................................21117.001719400300000
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCT--...................................................................................................................22115.0015011300100000
...................................................................................................GTGTGATTTGTAGCAAAGT...............................................................................................................................................................19115.001515002070000
...................................................................................................GTGTGATTTGTAGCAAAGTGAC............................................................................................................................................................22114.0014101300000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGTT--...................................................................................................................23112.001207400010000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACC.......................................................................................................................21111.0011001100000000
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCA--...................................................................................................................2219.00908100000000
.............................................................................G---TTACTGGGCATTTTGGGT..................................................................................................................................................................................1917.00701320010000
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCC--...................................................................................................................2217.00702500000000
..........................................................................................................................................CCCTTGTTGCAAACCTCACGT......................................................................................................................2116.00605000010000
....................................................................................................TGTGATTTGTAGCAAAGTGA.............................................................................................................................................................2016.00615000000000
...........................................................................................................................................CCTTGTTGCAAACCTCACGCT--T..................................................................................................................2215.00503200000000
.........................................................................................................................................CCCCTTGTTGCAAACCTC..........................................................................................................................1815.00503100100000
...................................................................................................GTGTGATTTGTAGCAAAGTGATATG.........................................................................................................................................................2515.00503010010000
...........................................................................................................................................CCTTGTTGCAAACCTCACGCC--...................................................................................................................2114.00401300000000
...................................................................................................GTGTGATTTGTAGCAAAGTGATC...........................................................................................................................................................2314.00420200000000
........................................................................................................................................TCCCCTTGTTGCAAACCTCACGT......................................................................................................................2314.00403100000000
............................................................................CG---TTACTGGGCATTTTGGGT..................................................................................................................................................................................2014.00401110010000
...........................................................................................................................................CCTTGTTGCAAACCTCAC........................................................................................................................1813.00302100000000
...................................................................................................GTGTGATTTGTAGCAAAG................................................................................................................................................................1813.00320100000000
...................................................................................................GTGTGATTTGTAGCAAAGTGG.............................................................................................................................................................2113.00330000000000
....................................................................................................TGTGATTTGTAGCAAAGTGATT...........................................................................................................................................................2213.00301200000000
........................................................................................................................................TCCCCTTGTTGCAAACCTCAC........................................................................................................................2112.00202000000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--T..................................................................................................................2412.00201100000000
...................................................................................................GTGTGATTTGTAGCAAAGTGATG...........................................................................................................................................................2312.00210010000000
..........................................................................................................................................CCCTTGTTGCAAACCTCACT.......................................................................................................................2012.00202000000000
.............................................................................G---TTACTGGGCATTTTGGGC..................................................................................................................................................................................1912.00200200000000
...........................................................................................................................................CCTTGTTGCAAACCTCACGCA--...................................................................................................................2112.00202000000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--TT.................................................................................................................2512.00202000000000
..................................................................................................TGTGTGATTTGTAGCAAAGTGA.............................................................................................................................................................2212.00200100100000
...................................................................................................GTGTGATTTGTAGCAAAGTGAA............................................................................................................................................................2212.00201001000000
.....................................................................................................GTGATTTGTAGCAAAGTGA.............................................................................................................................................................1911.00100100000000
......................................................................................................................................CATCCCCTTGTTGCAAACCTCACG.......................................................................................................................2411.00101000000000
droEre2
TC---A-GAAAAAC---A--T---A-----T---T-------------TGA----TG-----------A-------CG---GTACCGGGCATTTTGGGTGTGTGATTTGTAGCAAAGTGATATGTATTTGAT--CATCCCCTTGTTGCAAACCTCACGCC--GAAGGTGAC-CTG--CGAA---------ATACA----CAGT------------------GTTATGGAAAAAAGAA---A----GTGCTCTTCAAGGGATATAGAATCCCTTTAATSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGC......................................................................................................................22111100.001110078252239169106726890
.........................................................................................................................................CCCCTTGTTGCAAACCTCACG.......................................................................................................................2117009.00700952363761401441179960
...................................................................................................GTGTGATTTGTAGCAAAGTGAT............................................................................................................................................................221915.009151397361035934420
..........................................................................................................................................CCCTTGTTGCAAACCTCACGC......................................................................................................................211677.006776461424380
...................................................................................................GTGTGATTTGTAGCAAAGTGA.............................................................................................................................................................211500.005004702742052170
..........................................................................................................................................CCCTTGTTGCAAACCTCACG.......................................................................................................................201416.004163923240150
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGT......................................................................................................................221408.0040814810226591630
...................................................................................................GTGTGATTTGTAGCAAAGTG..............................................................................................................................................................201355.00355370150792240
.........................................................................................................................................CCCCTTGTTGCAAACCTCAC........................................................................................................................201295.00295205394215300
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--...................................................................................................................23184.0084374212020
..................................................................................................TGTGTGATTTGTAGCAAAGTGA.............................................................................................................................................................22180.0080602022500
...................................................................................................GTGTGATTTGTAGCAAAGTGATA...........................................................................................................................................................23165.0065715324250
.........................................................................................................................................CCCCTTGTTGCAAACCTCACT.......................................................................................................................21162.006254000080
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--...................................................................................................................23161.0061401131060
...................................................................................................GTGTGATTTGTAGCAAAGT...............................................................................................................................................................19156.0056901032140
....................................................................................................TGTGATTTGTAGCAAAGTGAT............................................................................................................................................................21155.00551616017150
...........................................................................................................................................CCTTGTTGCAAACCTCACGC......................................................................................................................20149.0049381100000
.........................................................................................................................................CCCCTTGTTGCAAACCTCA.........................................................................................................................19146.004629210860
...................................................................................................GTGTGATTTGTAGCAAAGTGATT...........................................................................................................................................................23139.0039101211690
............................................................................................................................................CTTGTTGCAAACCTCACGC......................................................................................................................19136.003625900110
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--...................................................................................................................23132.003230100010
...........................................................................................................................................CCTTGTTGCAAACCTCACG.......................................................................................................................19126.002622100030
........................................................................................................................................TCCCCTTGTTGCAAACCTCACG.......................................................................................................................22125.002519401010
....................................................................................................TGTGATTTGTAGCAAAGTGA.............................................................................................................................................................20123.002380002130
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGA......................................................................................................................22123.002316420010
..................................................................................................TGTGTGATTTGTAGCAAAGTG..............................................................................................................................................................21122.002220208100
.........................................................................................................................................CCCCTTGTTGCAAACCTCACA.......................................................................................................................21120.002017100020
....................................................................................................TGTGATTTGTAGCAAAGTGATA...........................................................................................................................................................22119.00198101720
..........................................................................................................................................CCCTTGTTGCAAACCTCACGT......................................................................................................................21119.00199100360
.............................................................................................................................................TTGTTGCAAACCTCACGC......................................................................................................................18118.001814200020
..........................................................................................................................................CCCTTGTTGCAAACCTCAC........................................................................................................................19117.001717000000
..................................................................................................TGTGTGATTTGTAGCAAAGTGAT............................................................................................................................................................23117.00172020670
............................................................................................................................................CTTGTTGCAAACCTCACG.......................................................................................................................18116.001613201000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACC.......................................................................................................................21114.001413100000
........................................................................................................................................TCCCCTTGTTGCAAACCTCACGC......................................................................................................................23112.001211100000
..............................T---T-------------TGA----TG-----------A-------CG---GTACCGGGCATTTTGGGT..................................................................................................................................................................................28111.001100000011
...................................................................................................GTGTGATTTGTAGCAAAGTGT.............................................................................................................................................................21110.00100010630
...................................................................................................GTGTGATTTGTAGCAAAG................................................................................................................................................................1819.0090010260
....................................................................................................TGTGATTTGTAGCAAAGTG..............................................................................................................................................................1916.0066000000
...................................................................................................GTGTGATTTGTAGCAAAGTGAA............................................................................................................................................................2216.0063001110
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGG......................................................................................................................2216.0065100000
.........................................................................................................................................CCCCTTGTTGCAAACCTCAA........................................................................................................................2016.0066000000
...................................................................................................GTGTGATTTGTAGCAAAGTGATATG.........................................................................................................................................................2515.0051000400
...................................................................................................GTGTGATTTGTAGCAAAGTT..............................................................................................................................................................2015.0052000120
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCT--...................................................................................................................2215.0054010000
...................................................................................................GTGTGATTTGTAGCAAAGTGATG...........................................................................................................................................................2315.0050001130
....................................................................................................TGTGATTTGTAGCAAAGTGATATG.........................................................................................................................................................2414.0041000120
...........................................................................................................................................CCTTGTTGCAAACCTCACGCC--...................................................................................................................2114.0043100000
.....................................................................................................GTGATTTGTAGCAAAGTGAT............................................................................................................................................................2013.0033000000
.....................................................................................................GTGATTTGTAGCAAAGTGA.............................................................................................................................................................1913.0032000010
.......................................................................................................................................ATCCCCTTGTTGCAAACCTCACGC......................................................................................................................2413.0032000010
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGTT--...................................................................................................................2313.0032010000
..........................................................................................................................................CCCTTGTTGCAAACCTCACGA......................................................................................................................2113.0033000000
..........................................................................................................................................CCCTTGTTGCAAACCTCACGG......................................................................................................................2113.0033000000
.............................................................................G---GTACCGGGCATTTTGGGT..................................................................................................................................................................................1913.0030000030
.................................................GA----TG-----------A-------CG---GTACCGGGCATTTTGGGT..................................................................................................................................................................................2512.0020000002
.........................................................................................................................................CCCCTTGTTGCAAACCTCACTT......................................................................................................................2212.0022000000
............................................................................CG---GTACCGGGCATTTTGGGT..................................................................................................................................................................................2012.0020000110
..........................................................................................................................................CCCTTGTTGCAAACCTCACT.......................................................................................................................2012.0022000000
........................................................................................................................................TCCCCTTGTTGCAAACCTCAC........................................................................................................................2112.0021100000
...........................................................................................................................................CCTTGTTGCAAACCTCACGCC--A..................................................................................................................2212.0022000000
...........................................................................................................................................CCTTGTTGCAAACCTCACGCT--T..................................................................................................................2212.0022000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCA--A..................................................................................................................2412.0020100010
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCT--T..................................................................................................................2412.0022000000
.................................................................................GTACCGGGCATTTTGGGT..................................................................................................................................................................................1812.0020000200
.........................................................................................................................................CCCCTTGTTGCAAACCTCAT........................................................................................................................2012.0021100000
...........................................................................................................................................CCTTGTTGCAAACCTCACGCT--...................................................................................................................2112.0022000000
......................................................................................................TGATTTGTAGCAAAGTGAT............................................................................................................................................................1912.0022000000
..........................................................................................................................................CCCTTGTTGCAAACCTCACGCA--...................................................................................................................2212.0022000000
..........................................................................................................................................CCCTTGTTGCAAACCTCA.........................................................................................................................1812.0022000000
.........................................................................................................................................CCCCTTGTTGCAAACCTCACGCC--A..................................................................................................................2412.0022000000
...........................................................................................................................................CCTTGTTGCAAACCTCACGT......................................................................................................................2012.0020000020
...........................................................................................................................................CCTTGTTGCAAACCTCACGCC--T..................................................................................................................2212.0022000000
...................................................................................................GTGTGATTTGTAGCAAAGTTT.............................................................................................................................................................2112.0020000110
....................................................................................................TGTGATTTGTAGCAAAGTGATT...........................................................................................................................................................2212.0022000000
....................................................................................................TGTGATTTGTAGCAAAGTGAG............................................................................................................................................................2111.0011000000

Generated: 10/20/2015 at 07:34 PM