ID:

dgr_14

 Coordinate:

scaffold_15252:13386244-13386305 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-53.5 -53.4 -53.3

Flybase annnotation

intergenic

No Repeatable elements found

Sense Strand Reads

GTTCTAAGAAACACACACAACACACGCCCCGCCCACACATATACACTGTATAAAGTATAGTGCCAGTATTTCGTGTAATTGATAAGTGAAATGCTGGCACTATATTTTATACAGCGTATATGTGTGCTAAACATATATCTATATTCTATGTTAACTCTGTGT
***********************************(((((((((.(((((((((((((((((((((((((((((((.....)))..)))))))))))))))))))))))))))).)))))))))..************************************ 		Read size # Mismatch Hit Count Total Norm Total M041
female body
 V109
male body
..................................................TAAAGTATAGTGCCAGTATTTC.......................................................................................... 22 0 1 3492.00 3492 3434 58
...................................................AAAGTATAGTGCCAGTATTTC.......................................................................................... 21 0 1 279.00 279 279 0
..................................................TAAAGTATAGTGCCAGTATTT........................................................................................... 21 0 1 228.00 228 215 13
.........................................................................................AATGCTGGCACTATATTTTATA................................................... 22 0 1 204.00 204 197 7
..................................................TAAAGTATAGTGCCAGTATT............................................................................................ 20 0 1 45.00 45 43 2
..................................................TAAAGTATAGTGCCAGTA.............................................................................................. 18 0 1 42.00 42 42 0
..........................................................................................ATGCTGGCACTATATTTTATA................................................... 21 0 1 24.00 24 24 0
..................................................TAAAGTATAGTGCCAGTATTTCT......................................................................................... 23 1 1 24.00 24 24 0
.........................................................................................AATGCTGGCACTATATTTTAT.................................................... 21 0 1 21.00 21 21 0
...................................................AAAGTATAGTGCCAGTATTT........................................................................................... 20 0 1 17.00 17 17 0
....................................................AAGTATAGTGCCAGTATTTC.......................................................................................... 20 0 1 16.00 16 16 0
...............................CCCACACATATACACTGTA................................................................................................................ 19 0 1 15.00 15 15 0
......................................................GTATAGTGCCAGTATTTC.......................................................................................... 18 0 1 13.00 13 13 0
.................................................CTAAAGTATAGTGCCAGTATTTC.......................................................................................... 23 1 1 12.00 12 12 0
..................................................TAAGGTATAGTGCCAGTATTTC.......................................................................................... 22 1 1 12.00 12 12 0
..................................................TAAAGTATAGTGCCAGTATTTCG......................................................................................... 23 0 1 10.00 10 10 0
..................................................TAAAGTATAGTGCCAGTATTTCTG........................................................................................ 24 2 1 7.00 7 7 0
..................................................TAAAGTATAGTGCCAGTATTTCC......................................................................................... 23 1 1 7.00 7 7 0
.....................................................AGTATAGTGCCAGTATTTC.......................................................................................... 19 0 1 7.00 7 7 0
.................................................TTAAAGTATAGTGCCAGTATTTC.......................................................................................... 23 1 1 6.00 6 6 0
..................................................TAAAGTATGGTGCCAGTATTTC.......................................................................................... 22 1 1 6.00 6 6 0
..................................................TAAAGTATAGTGCCAGTAT............................................................................................. 19 0 1 5.00 5 5 0
..................................................TAAAGAATAGTGCCAGTATTTC.......................................................................................... 22 1 1 4.00 4 4 0
..................................................TAAAGTATATTGCCAGTATTTC.......................................................................................... 22 1 1 4.00 4 4 0
..................................................TGAAGTATAGTGCCAGTATTTC.......................................................................................... 22 1 1 3.00 3 3 0
...................................................AAAGTATAGTGCCAGTATT............................................................................................ 19 0 1 3.00 3 3 0
..................................................TAAAGTATAGTGCCAGTATTTCA......................................................................................... 23 1 1 3.00 3 3 0
.................................................ATAAAGTATAGTGCCAGTATTTC.......................................................................................... 23 0 1 3.00 3 3 0
..............................GCCCACACATATACACTGTA................................................................................................................ 20 0 1 2.00 2 2 0
.........................................................................................AATGCTGGCACTATATTTTA..................................................... 20 0 1 2.00 2 2 0
..................................................TAGAGTATAGTGCCAGTATTTC.......................................................................................... 22 1 1 2.00 2 2 0
..................................................TAAAGTATAGTGCCAGTATTTCCTG....................................................................................... 25 1 1 2.00 2 2 0
..................................................TAAAGTATAGTGCCAGTGTTTC.......................................................................................... 22 1 1 2.00 2 1 1
..................................................CAAAGTATAGTGCCAGTATTTC.......................................................................................... 22 1 1 2.00 2 2 0
................................CCACACATATACACTGTA................................................................................................................ 18 0 1 2.00 2 2 0
..................................................TAAAGTATAGTGCCAGTATTTCGG........................................................................................ 24 1 1 2.00 2 2 0
..................................................TAAGGTATAGTGCCAGTATTT........................................................................................... 21 1 1 2.00 2 2 0
..................................................TAAAGTATAGTGCCAGTATTTTG......................................................................................... 23 1 1 2.00 2 2 0
.................................................CTAAAGTATAGTGCCAGTATTT........................................................................................... 22 1 1 2.00 2 2 0
..................................................TAAAGTATAGTGCCAGTATTTT.......................................................................................... 22 1 1 2.00 2 2 0
...................................................AAAGTATAGTGCCAGTATTTCT......................................................................................... 22 1 1 2.00 2 2 0
..................................................TAAAGTATAGTGCCAGTATTTA.......................................................................................... 22 1 1 2.00 2 1 1
.................................................GTAAAGTATAGTGCCAGTATTTC.......................................................................................... 23 1 1 2.00 2 2 0
.........................................................................................AATGCTGGCACTATATTTT...................................................... 19 0 1 2.00 2 2 0
..................................................TAAAGTATAGTGCCAGTATTA........................................................................................... 21 1 1 2.00 2 2 0
..................................................TAAAGTGTAGTGCCAGTATTTC.......................................................................................... 22 1 1 2.00 2 2 0
..................................................TAAAGTATAGTGCCAGTATTTCCT........................................................................................ 24 1 1 2.00 2 2 0
..................................................TAAAGTATAGTGCTAGTATTTC.......................................................................................... 22 1 1 2.00 2 2 0
...............................................................................................................CAGCGTATATGTGTGCTAAACATA........................... 24 0 1 1.00 1 0 1
..................................................TAAAGTATAGTGCCAGTATTTCGTAC...................................................................................... 26 2 1 1.00 1 0 1
...............................................................................................................CAGCGTATATGTGTGCTAAAC.............................. 21 0 1 1.00 1 1 0
..................................................TAAAGTATAGTGCCAGTATTTCCA........................................................................................ 24 2 1 1.00 1 1 0
.................................................CTAAAGTATAGTGCCAGTAT............................................................................................. 20 1 1 1.00 1 1 0
................................................AGTAAAGTATAGTGCCAGTATTT........................................................................................... 23 2 1 1.00 1 1 0
..................................................TAAAGTATGGTGCCAGTA.............................................................................................. 18 1 1 1.00 1 1 0
...................................................AAAGTATAGTGCCAATATTTC.......................................................................................... 21 1 1 1.00 1 1 0
..................................................TAAAGTATACTGCCAGTATTTC.......................................................................................... 22 1 1 1.00 1 1 0
...................................................AAGGTATAGTGCCAGTATT............................................................................................ 19 1 1 1.00 1 1 0
....................................................AAGTATAGTGCCAGTATTTCG......................................................................................... 21 0 1 1.00 1 1 0
..................................................TAAAGTATAGTCCCAGTATTTC.......................................................................................... 22 1 1 1.00 1 0 1
..............................................CTAATAAAGTATAGTGCCAGTATTTC.......................................................................................... 26 3 1 1.00 1 1 0
..................................................TAAAGTATAGTGCCAGTATTCC.......................................................................................... 22 1 1 1.00 1 1 0
.....................................................TGTATAGTGCCAGTATTTC.......................................................................................... 19 1 1 1.00 1 1 0
..................................................TAAAGTATGGTGCCAGTATTT........................................................................................... 21 1 1 1.00 1 1 0
..............................................TATGTAAAGTATAGTGCCAGTATTTC.......................................................................................... 26 2 1 1.00 1 1 0
...............................................ATTTAAAGTATAGTGCCAGTATTTC.......................................................................................... 25 2 1 1.00 1 1 0
........................................................................................AAATGCTGGCACTATATTTTAT.................................................... 22 0 1 1.00 1 1 0
..................................................TAAAGTATAGTGCCAGTAA............................................................................................. 19 1 1 1.00 1 1 0
................................................AGTAAAGTATAGTGCCAGTATTTC.......................................................................................... 24 2 1 1.00 1 1 0
..................................................TAAACTATAGTGCCAGTATTT........................................................................................... 21 1 1 1.00 1 1 0
..............................ACCCACACATATACACTGTA................................................................................................................ 20 1 1 1.00 1 1 0
..................................................TAAAGTATGGTGCCAGTATTTCG......................................................................................... 23 1 1 1.00 1 1 0
..................................................TAAAGTATAGTGCCAGTATTTAT......................................................................................... 23 2 1 1.00 1 1 0
......................................................CTATAGTGCCAGTATTTC.......................................................................................... 18 1 1 1.00 1 1 0
..............................................GCAATAAAGTATAGTGCCAGTATTTC.......................................................................................... 26 3 1 1.00 1 1 0
.........................................................................................AATGCTGGCACTATATTTTATAA.................................................. 23 1 1 1.00 1 1 0
..................................................TAAAGTATAGTGCCAGTATTTCGCCTC..................................................................................... 27 3 1 1.00 1 1 0
...........................................................................................TGCTGGCACTATATTTTATA................................................... 20 0 1 1.00 1 1 0
..................................................TAAAGTATAGAGCCAGTATTTC.......................................................................................... 22 1 1 1.00 1 1 0
...............................................GCCTAAAGTATAGTGCCAGTATTT........................................................................................... 24 2 1 1.00 1 1 0
...............................................AGGTAAAGTATAGTGCCAGTATTTC.......................................................................................... 25 3 1 1.00 1 1 0
..................................................TAAAGTATAGTGCCAGTATTTCGGAC...................................................................................... 26 3 1 1.00 1 1 0
.......................................................TATAGTGCCAGTATTTCTT........................................................................................ 19 1 1 1.00 1 1 0
...................................................AAAGTATAGTGCCAGTATTTCG......................................................................................... 22 0 1 1.00 1 1 0
..................................................TAAAGTATAGTGCCAGTATTTCTA........................................................................................ 24 2 1 1.00 1 1 0
.......................................................................................AAAATGCTGGCACTATATTTTATA................................................... 24 1 1 1.00 1 1 0
..................................................TAAAGTATAGTGGCAGTATTTC.......................................................................................... 22 1 1 1.00 1 1 0
..................................................TAAAGTATAGTGCCAGTATTTCTAC....................................................................................... 25 3 1 1.00 1 0 1
.........................................................................................AATGCTGGCACTATATTTTATAGTGC............................................... 26 2 1 1.00 1 1 0
...............................................................................................................CAGCGTATATGTGTGCTA................................. 18 0 1 1.00 1 1 0
...................................................AAAGTATAGTGCCAGTATTTCTAGC...................................................................................... 25 3 1 1.00 1 1 0
......................................................................................TGAAATGCTGGCACTATATTTT...................................................... 22 0 1 1.00 1 1 0
...........................................CTCTATCTAAAGTATAGTGCCAGTATTTC.......................................................................................... 29 3 1 1.00 1 1 0
.........................................................................................AATGCTGGCACTATGTTTTATA................................................... 22 1 1 1.00 1 1 0
..................................................TAAAGTATAGTGCCAGTATTTCGAAC...................................................................................... 26 3 1 1.00 1 1 0
..................................................TAAAGTATAGTGCCGGTA.............................................................................................. 18 1 1 1.00 1 1 0
.........................................................................................AATGCTGGCACTATATTTTATAG.................................................. 23 1 1 1.00 1 1 0
...............................CCCACACATATACACTGTAG............................................................................................................... 20 1 1 1.00 1 1 0
..............................................TATCTAAAGTATAGTGCCAGTATTT........................................................................................... 25 2 1 1.00 1 1 0
..................................................TAAAGTATAGTGCCAGTAGTGTG......................................................................................... 23 3 1 1.00 1 1 0
................................................GTTAAAGTATAGTGCCAGTATTTC.......................................................................................... 24 2 1 1.00 1 1 0
.................................................ATAAAGTATAGTGCCAGTATTTG.......................................................................................... 23 1 1 1.00 1 1 0
...................................................AAAGTATAGTGCCAGTAT............................................................................................. 18 0 1 1.00 1 1 0
..................................................TAAAGTATAGTGCCAGTCTTTC.......................................................................................... 22 1 1 1.00 1 0 1
..................................................TAAAGTATAGTGCCAGTATTTCACG....................................................................................... 25 2 1 1.00 1 1 0
..................................................TAAAGTATGGTGCCAGTATT............................................................................................ 20 1 1 1.00 1 1 0
..................................................TAAAGTATAGTGCCAGTATTTTT......................................................................................... 23 2 1 1.00 1 1 0
..................................................TAAAGTATAGTGCCAGTATTTCGGGA...................................................................................... 26 2 1 1.00 1 1 0
...................................................AAAGTATAGTGCCAGTATTTCC......................................................................................... 22 1 1 1.00 1 1 0
..................................................TGAGGTATGGTGCCAGTATTTC.......................................................................................... 22 3 1 1.00 1 1 0
...............................................CTATAAAGTATAGTGCCAGT............................................................................................... 20 1 1 1.00 1 1 0
....................................................AAGTATAGTGCCAGTATTT........................................................................................... 19 0 1 1.00 1 1 0
........................................................................................AAATGCTGGCACTATATTTTATA................................................... 23 0 1 1.00 1 1 0
...................................................AAGGTATAGTGCCAGTATTTC.......................................................................................... 21 1 1 1.00 1 1 0
...............................................CTTTAAAGTATAGTGCCAGTATTTC.......................................................................................... 25 2 1 1.00 1 1 0
................................................CATAAAGTATAGTGCCAGTATTTC.......................................................................................... 24 1 1 1.00 1 1 0
..................................................TAAAGTATAGTTCCAGTATTTC.......................................................................................... 22 1 1 1.00 1 1 0
.................................................CTAAGGTATAGTGCCAGTATTTC.......................................................................................... 23 2 1 1.00 1 1 0
.........................................................................................AATGCTGGCACTATATTTTT..................................................... 20 1 1 1.00 1 1 0
..................................................TAAAGTATAATGCCAGTATTT........................................................................................... 21 1 1 1.00 1 1 0
................................................ACTAAAGTATAGTGCCAGTATTTC.......................................................................................... 24 2 1 1.00 1 1 0
..................................................TAAAGTATAGTGCCAGTATTTCGATA...................................................................................... 26 3 1 1.00 1 1 0
........................................................................................AAATGCTGGCACTATATT........................................................ 18 0 1 1.00 1 1 0
..................................................TAAAGTATAGTGCCAGTATTTCGGT....................................................................................... 25 2 1 1.00 1 1 0
...............................................AGTTAAAGTATAGTGCCAGTATTTC.......................................................................................... 25 3 1 1.00 1 1 0
.........................................................................................AATGCTGGCACTATATTTTATAAA................................................. 24 1 1 1.00 1 1 0
.........................................................................................AATGCTGGCACTATATTTTATAT.................................................. 23 1 1 1.00 1 1 0
..................................................TAAAGTATAGTGCCAGTATTTCCTC....................................................................................... 25 2 1 1.00 1 1 0
..................................................TAAAGTATAGTGCCAGTTTT............................................................................................ 20 1 1 1.00 1 0 1
.................................................TTAAAGCATAGTGCCAGTATTTC.......................................................................................... 23 2 1 1.00 1 1 0
.................................................TTAAAGTATAGTGCCAGT............................................................................................... 18 1 1 1.00 1 1 0
.............................................CTAGCTAAAGTATAGTGCCAGTATTTC.......................................................................................... 27 3 1 1.00 1 1 0
...............................................ATCTAAAGTATAGTGCCAGTATTTC.......................................................................................... 25 2 1 1.00 1 1 0
............................................................................................GCTGGCACTATATTTTATA................................................... 19 0 1 1.00 1 1 0
..................................................TAAAGTATAGCGCCAGTATTTC.......................................................................................... 22 1 1 1.00 1 1 0
..................................................TAAAGTATAGTGCCAGTATTTCGA........................................................................................ 24 1 1 1.00 1 1 0
..................................................TAAAGTATAGTGCAAGTATTTC.......................................................................................... 22 1 1 1.00 1 1 0
..................................................TAAAGTATAGTGCCAGCATTTC.......................................................................................... 22 1 2 1.00 2 2 0
..................................................TAAAGTATAGTGCCAGTATTTCAC........................................................................................ 24 2 2 0.50 1 1 0
.............................TACCCACACATATACACTGTA................................................................................................................ 21 2 4 0.25 1 1 0
..................................................TAAAGTATAGTGCCAGTAAAA........................................................................................... 21 3 10 0.10 1 1 0

Anti-sense strand reads

CAAGATTCTTTGTGTGTGTTGTGTGCGGGGCGGGTGTGTATATGTGACATATTTCATATCACGGTCATAAAGCACATTAACTATTCACTTTACGACCGTGATATAAAATATGTCGCATATACACACGATTTGTATATAGATATAAGATACAATTGAGACACA
************************************(((((((((.(((((((((((((((((((((((((((((((.....)))..)))))))))))))))))))))))))))).)))))))))..*********************************** 		Read size # Mismatch Hit Count Total Norm Total M041
female body
.......................................................................................CTTTACGACCGTGATATGAAAT..................................................... 22 1 2 1.00 2 2
.....................................................................................CACTTTATGACCGTGATATGAAAT..................................................... 24 2 2 0.50 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droGri2 scaffold_15252:13386194-13386355 - dgr_14 GTTCT------AAGAAACACACACAACACACGCCCCGCCCACACATATACACTGTATAAAGTATAGTGCCAGTATTTCGTGTAA-------------------------T-TGATAAGTGAAATGCTGGCACTATATTTTATA-CAGCGTATATGTGTGCTAAACATATATCTATATTCTATGTTAACTCTGTGT
droVir3 scaffold_12963:15955760-15955866 - GCCTAACTAATTAGGCAT------A--------GTCGCCCACACAATCA--TCTC----CTTACAGTGACAGCATTTCGTATAA-------------------------ATCATTAAGTTA----TA-ATACTAC-----------------------------------TTAAAGCTCTATCTT---TATATGA
droMoj3 scaffold_6500:5400061-5400214 - GTTGT------TAAGCATTCACTCAACCC-------------------ATATTGCCTAGTGTTTAGTGTCCGCATTTCGTATATACATACATACACACATATGCCTGTAC-TATTAAGTAC-ATATT-GTACTATATTTTCTAAGAATGAATAT---------TCATATATGTATGTTCTCTATG---TATATG-

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droGri2
GTTCT------AAGAAACACACACAACACACGCCCCGCCCACACATATACACTGTATAAAGTATAGTGCCAGTATTTCGTGTAA-------------------------T-TGATAAGTGAAATGCTGGCACTATATTTTATA-CAGCGTATATGTGTGCTAAACATATATCTATATTCTATGTTAACTCTGTGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
........................................................TAAAGTATAGTGCCAGTATTTC.....................................................................................................................2213492.003492343458
.........................................................AAAGTATAGTGCCAGTATTTC.....................................................................................................................211279.002792790
........................................................TAAAGTATAGTGCCAGTATTT......................................................................................................................211228.0022821513
.........................................................................................................................AATGCTGGCACTATATTTTATA-...................................................221204.002041977
........................................................TAAAGTATAGTGCCAGTATT.......................................................................................................................20145.0045432
........................................................TAAAGTATAGTGCCAGTA.........................................................................................................................18142.0042420
..........................................................................................................................ATGCTGGCACTATATTTTATA-...................................................21124.0024240
........................................................TAAAGTATAGTGCCAGTATTTCT....................................................................................................................23124.0024240
.........................................................................................................................AATGCTGGCACTATATTTTAT.....................................................21121.0021210
.........................................................AAAGTATAGTGCCAGTATTT......................................................................................................................20117.0017170
..........................................................AAGTATAGTGCCAGTATTTC.....................................................................................................................20116.0016160
.....................................CCCACACATATACACTGTA...........................................................................................................................................19115.0015150
............................................................GTATAGTGCCAGTATTTC.....................................................................................................................18113.0013130
........................................................TAAAGTATAGTGCCAGTATTTCG....................................................................................................................23110.0010100
........................................................TAAAGTATAGTGCCAGTATTTCTG...................................................................................................................2417.00770
........................................................TAAAGTATAGTGCCAGTATTTCC....................................................................................................................2317.00770
...........................................................AGTATAGTGCCAGTATTTC.....................................................................................................................1917.00770
........................................................TAAAGTATAGTGCCAGTAT........................................................................................................................1915.00550
.........................................................AAAGTATAGTGCCAGTATT.......................................................................................................................1913.00330
........................................................TAAAGTATAGTGCCAGTATTTCA....................................................................................................................2313.00330
.......................................................ATAAAGTATAGTGCCAGTATTTC.....................................................................................................................2313.00330
....................................GCCCACACATATACACTGTA...........................................................................................................................................2012.00220
.........................................................................................................................AATGCTGGCACTATATTTTA......................................................2012.00220
......................................CCACACATATACACTGTA...........................................................................................................................................1812.00220
........................................................TAAAGTATAGTGCCAGTATTTCGG...................................................................................................................2412.00220
........................................................TAAAGTATAGTGCCAGTATTTT.....................................................................................................................2212.00220
.........................................................AAAGTATAGTGCCAGTATTTCT....................................................................................................................2212.00220
........................................................TAAAGTATAGTGCCAGTATTTA.....................................................................................................................2212.00211
.........................................................................................................................AATGCTGGCACTATATTTT.......................................................1912.00220
........................................................TAAAGTATAGTGCCAGTATTA......................................................................................................................2112.00220
................................................................................................................................................CAGCGTATATGTGTGCTAAACATA...........................2411.00101
........................................................TAAAGTATAGTGCCAGTATTTCGTAC.................................................................................................................2611.00101
................................................................................................................................................CAGCGTATATGTGTGCTAAAC..............................2111.00110
........................................................TAAAGTATAGTGCCAGTATTTCCA...................................................................................................................2411.00110
..........................................................AAGTATAGTGCCAGTATTTCG....................................................................................................................2111.00110
........................................................................................................................AAATGCTGGCACTATATTTTAT.....................................................2211.00110
........................................................TAAAGTATAGTGCCAGTAA........................................................................................................................1911.00110
........................................................TAAAGTATAGTGCCAGTATTTAT....................................................................................................................2311.00110
.........................................................................................................................AATGCTGGCACTATATTTTATA-A..................................................2311.00110
...........................................................................................................................TGCTGGCACTATATTTTATA-...................................................2011.00110
........................................................TAAAGTATAGTGCCAGTATTTCGGAC.................................................................................................................2611.00110
.........................................................AAAGTATAGTGCCAGTATTTCG....................................................................................................................2211.00110
........................................................TAAAGTATAGTGCCAGTATTTCTA...................................................................................................................2411.00110
........................................................TAAAGTATAGTGCCAGTATTTCTAC..................................................................................................................2511.00101
................................................................................................................................................CAGCGTATATGTGTGCTA.................................1811.00110
......................................................................................................................TGAAATGCTGGCACTATATTTT.......................................................2211.00110
........................................................TAAAGTATAGTGCCAGTATTTCGAAC.................................................................................................................2611.00110
.........................................................................................................................AATGCTGGCACTATATTTTATA-G..................................................2311.00110
.....................................CCCACACATATACACTGTAG..........................................................................................................................................2011.00110
.......................................................ATAAAGTATAGTGCCAGTATTTG.....................................................................................................................2311.00110
.........................................................AAAGTATAGTGCCAGTAT........................................................................................................................1811.00110
........................................................TAAAGTATAGTGCCAGTATTTTT....................................................................................................................2311.00110
.........................................................AAAGTATAGTGCCAGTATTTCC....................................................................................................................2211.00110
..........................................................AAGTATAGTGCCAGTATTT......................................................................................................................1911.00110
........................................................................................................................AAATGCTGGCACTATATTTTATA-...................................................2311.00110
.........................................................................................................................AATGCTGGCACTATATTTTT......................................................2011.00110
........................................................TAAAGTATAGTGCCAGTATTTCGATA.................................................................................................................2611.00110
........................................................................................................................AAATGCTGGCACTATATT.........................................................1811.00110
........................................................TAAAGTATAGTGCCAGTATTTCGGT..................................................................................................................2511.00110
.........................................................................................................................AATGCTGGCACTATATTTTATA-T..................................................2311.00110
............................................................................................................................GCTGGCACTATATTTTATA-...................................................1911.00110
........................................................TAAAGTATAGTGCCAGTATTTCGA...................................................................................................................2411.00110
........................................................TAAAGTATAGTGCCAGTATTTCAC...................................................................................................................2420.50110
........................................................TAAAGTATAGTGCCAGTAAAA......................................................................................................................21100.10110
droVir3
GCCTAACTAATTAGGCAT------A--------GTCGCCCACACAATCA--TCTC----CTTACAGTGACAGCATTTCGTATAA-------------------------ATCATTAAGTTA----TA-ATACTAC-----------------------------------TTAAAGCTCTATCTT---TATATGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................................................................GACAGCATTTCGTATAA-------------------------ATCATTAA..............................................................................2511.001000000000000000100000000000000000000000000000000000000000000000
...................................CGCCCACACAATCA--TCTC----CTTACA..................................................................................................................................2411.001000000000000001000000000000000000000000000000000000000000000000
...................................................................................................................................CTAC-----------------------------------TTAAAGCTCTAT.............1611.001000000000000000000000000000000000000000000000000000000000000001
....................................GCCCACACAATCA--TCTC----CTTACAGT................................................................................................................................2511.001000000000000001000000000000000000000000000000000000000000000000
droMoj3
GTTGT------TAAGCATTCACTCAACCC-------------------ATATTGCCTAGTGTTTAGTGTCCGCATTTCGTATATACATACATACACACATATGCCTGTAC-TATTAAGTAC-ATATT-GTACTATATTTTCTAAGAATGAATAT---------TCATATATGTATGTTCTCTATG---TATATG-SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
................ATTCACTCAACCC-------------------ATATTGC............................................................................................................................................2011.001000010

Generated: 05/17/2015 at 07:55 PM