ID:

dgr_1

 Coordinate:

scaffold_8129:810-869 -

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

intergenic

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-38.0

Flybase annnotation

intergenic

No Repeatable elements found

mature

  1. dgr_1  scaffold_8129:811-832 -
  2. dgr_5  scaffold_14906:1491755-1491776 -
star

  1. dgr_1  scaffold_8129:848-869 -
  2. dgr_5  scaffold_14906:1491792-1491813 -

Sense Strand Reads

CCAGCCCACAATGGATAAGGACAAGAGACAGCAGTCGCTCAATTACCATGACATAGTCGTACGGTGAATGTTGTGTTTGGAGTCCAATGTTAACTGTAAGACTGTGTCTTGGTGGTTGCCAGCCAAGCAACAAACGATGACCACCCAAAACGGAAGCCAA

***********************************.((((((((((((.(((((((((.((((((.(((((((...........))))))).)))))).))))))))).)))))))))..))).************************************ 		Read size # Mismatch Hit Count Total Norm Total V109

male body		 M041

female body
.......................................................................................TGTTAACTGTAAGACTGTGTCT................................................... 22 0 2 1880.00 3760 2305 1455
........................................................................................GTTAACTGTAAGACTGTGTCT................................................... 21 0 2 89.00 178 8 170
.......................................................................................TGTTAACTGTGAGACTGTGTCT................................................... 22 1 2 65.00 130 80 50
.......................................................................................TGTTAACTGTAAGACTGTGTC.................................................... 21 0 2 56.00 112 82 30
.......................................................................................TGTTAACTGTAAGACTGTGT..................................................... 20 0 2 47.00 94 70 24
.......................................................................................TGTTAACTGTAAGACTGTGTCTT.................................................. 23 0 2 23.00 46 33 13
.......................................................................................TGTTAACTGTAAGACTGAGTCT................................................... 22 1 2 13.00 26 26 0
.......................................................................................TGTTAACTGTAAGACTGCGTCT................................................... 22 1 2 13.00 26 26 0
.......................................................................................TGTTAACTGTAAGACTGTGTCC................................................... 22 1 2 6.50 13 12 1
..................................................ACATAGTCGTACGGTGAATGTT........................................................................................ 22 0 2 6.00 12 2 10
.......................................................................................TGTTAACTCTAAGACTGTGTCT................................................... 22 1 2 5.50 11 11 0
.......................................................................................TGTTAAATGTAAGACTGTGTCT................................................... 22 1 2 5.50 11 10 1
.........................................................................................TTAACTGTAAGACTGTGTCT................................................... 20 0 2 5.50 11 2 9
.......................................................................................TGTTAACTGTAAGACTGGGTCT................................................... 22 1 2 5.00 10 9 1
.......................................................................................TGTTAACTGTAAGACTGTGTCTA.................................................. 23 1 2 5.00 10 9 1
.......................................................................................TGTTAACTGTAAGACTGTGCCT................................................... 22 1 2 4.50 9 7 2
.......................................................................................TGTTACCTGTAAGACTGTGTCT................................................... 22 1 2 4.50 9 9 0
......................................................................................ATGTTAACTGTAAGACTGTGTCT................................................... 23 0 2 4.00 8 4 4
........................................................................................GTTAACTGTGAGACTGTGTCT................................................... 21 1 2 3.50 7 0 7
.......................................................................................TGTTAACTATAAGACTGTGTCT................................................... 22 1 2 3.50 7 7 0
.......................................................................................TGATAACTGTAAGACTGTGTCT................................................... 22 1 2 3.50 7 7 0
.......................................................................................TGTTAGCTGTAAGACTGTGTCT................................................... 22 1 2 3.50 7 6 1
.......................................................................................TGTTAACTGTAAGACTGTCT..................................................... 20 1 2 3.00 6 4 2
........................................................................................TTTAACTGTAAGACTGTGTCT................................................... 21 1 2 3.00 6 6 0
.......................................................................................TGCTAACTGTAAGACTGTGTCT................................................... 22 1 2 3.00 6 6 0
.......................................................................................TGTTAACTGTAAGACTGTGTCTTT................................................. 24 1 2 3.00 6 6 0
.......................................................................................TGTCAACTGTAAGACTGTGTCT................................................... 22 1 2 2.50 5 5 0
.......................................................................................TGTTAACTGTAAGACTGTTTCT................................................... 22 1 2 2.50 5 4 1
.......................................................................................TGTTAACTTTAAGACTGTGTCT................................................... 22 1 2 2.00 4 4 0
.......................................................................................TGTTAATTGTAAGACTGTGTCT................................................... 22 1 2 2.00 4 3 1
.......................................................................................TGTTAACTGTAAGACTGTCTCT................................................... 22 1 2 2.00 4 4 0
.......................................................................................TGTTAACTGTACGACTGTGTCT................................................... 22 1 2 2.00 4 4 0
...............................CAGTCGCTCAATTACCATG.............................................................................................................. 19 0 2 2.00 4 0 4
.......................................................................................TGTTAACTGCAAGACTGTGTCT................................................... 22 1 2 2.00 4 3 1
.......................................................................................TGTTAACTGTAGGACTGTGTCT................................................... 22 1 2 2.00 4 3 1
.......................................................................................TGTTATCTGTAAGACTGTGTCT................................................... 22 1 2 2.00 4 4 0
.......................................................................................TGTTAACTGTGGGACTGTGTCT................................................... 22 2 2 1.50 3 2 1
.......................................................................................TGTTAACTGTAAGACTATGTCT................................................... 22 1 2 1.50 3 3 0
.......................................................................................TGTTGACTGTAAGACTGTGTCT................................................... 22 1 2 1.50 3 2 1
.......................................................................................TGTTAACTGTAAGACTTTGTCT................................................... 22 1 2 1.50 3 2 1
..................................................ACATAGTCGTACGGTGAATGTTG....................................................................................... 23 0 2 1.50 3 3 0
.......................................................................................CGTTAACTGTAAGACTGTGTCT................................................... 22 1 2 1.50 3 3 0
.......................................................................................TGTTAACTGTAAGACTGTGTCTC.................................................. 23 1 2 1.50 3 3 0
.......................................................................................TGTTAAGTGTAAGACTGTGTCT................................................... 22 1 2 1.50 3 3 0
........................................................................................GTTAACTGTAAGACTGTGTC.................................................... 20 0 2 1.50 3 0 3
.......................................................................................TGTTAACTGTAAGGCTGTGTCT................................................... 22 1 2 1.50 3 2 1
.......................................................................................TGTTAACTGTGAGACTGAGTCT................................................... 22 2 2 1.50 3 3 0
.......................................................................................TGTTAACTGTAACACTGTGTCT................................................... 22 1 2 1.00 2 2 0
.......................................................................................TGTTAACTGTAAGACCGTGTCT................................................... 22 1 2 1.00 2 1 1
.......................................................................................TGCTAATTGTAAGACTGTGTCT................................................... 22 2 2 1.00 2 2 0
.......................................................................................TGTTAACTGTAAGACTGGGTC.................................................... 21 1 2 1.00 2 2 0
........................................................................................GTTAACTGTAAGACTGTGT..................................................... 19 0 2 1.00 2 0 2
.......................................................................................TGTTAACTGTAAGCCTGTGTCT................................................... 22 1 2 1.00 2 2 0
........................................................................................GTTAACTGTGGGACTGTGTCT................................................... 21 2 2 1.00 2 0 2
.......................................................................................TGCTAACTGTAAGACTGTGTC.................................................... 21 1 2 1.00 2 2 0
.......................................................................................TGTTGACTGTGAGACTGTGTCT................................................... 22 2 2 1.00 2 2 0
.......................................................................................TGTTAACTGTAAGACTGTGTAT................................................... 22 1 2 1.00 2 2 0
.......................................................................................AGTTAACTGTAAGACTGTGTCT................................................... 22 1 2 1.00 2 2 0
.......................................................................................TGTTAACTGTAAGACTGTGTCTG.................................................. 23 1 2 1.00 2 0 2
.........................................................................................TTAACTGTAAGACTGTGTCC................................................... 20 1 2 1.00 2 1 1
.......................................................................................TGGTAACTGTAAGACTGTGTCT................................................... 22 1 2 1.00 2 2 0
.......................................................................................TGTTAACTGTAAGACTGTGTCTCC................................................. 24 2 2 1.00 2 2 0
.......................................................................................TCTTAACTGTAAGACTGTGTCT................................................... 22 1 2 1.00 2 2 0
.......................................................................................TGTTAACCGTAAGACTGTGTCT................................................... 22 1 2 0.50 1 1 0
........................................................................................GTTAACTGTAAGACTGTATCT................................................... 21 1 2 0.50 1 0 1
.......................................................................................TGTTAACTGTAAGACTGAGTC.................................................... 21 1 2 0.50 1 1 0
......................................................................................CTGTTAACTGTAAGACTGTGTCT................................................... 23 1 2 0.50 1 0 1
.......................................................................................TGTTAACTGCAAGACTGTGTC.................................................... 21 1 2 0.50 1 1 0
........................................................................................GTTAACTGTAAGACTGTGCCT................................................... 21 1 2 0.50 1 0 1
.......................................................................................TCTTAACTGTGAGACTGTGTCT................................................... 22 2 2 0.50 1 1 0
.......................................................................................TGTTAACTGTGATACTGTGTCT................................................... 22 2 2 0.50 1 1 0
.......................................................................................TGTTAACAGTAAGACTGTGTCT................................................... 22 1 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAGACTGTGTCTTAA................................................ 25 2 2 0.50 1 0 1
.......................................................................................TGTTAAATGTAAGACTGTGTCTT.................................................. 23 1 2 0.50 1 1 0
........................................................................................TGTAACTGTAAGACTGTGTCT................................................... 21 2 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAGACTGCGT..................................................... 20 1 2 0.50 1 1 0
.......................................................................................TGTTACCTGTAAGACTGTGT..................................................... 20 1 2 0.50 1 1 0
.......................................................................................TGTTAACTGTCAGACTGTGTCT................................................... 22 1 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAGACTCTGTCT................................................... 22 1 2 0.50 1 1 0
.......................................................................................TGCTAACTGTGAGACTGTGTCT................................................... 22 2 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAGACTGTTTC.................................................... 21 1 2 0.50 1 1 0
.......................................................................................TGTTGACTGTAAGACTGGGTCT................................................... 22 2 2 0.50 1 1 0
.......................................................................................TGCTAACTGTAAGACTGTCT..................................................... 20 2 2 0.50 1 1 0
.......................................................................................TGTTAACTGTGAGACTGTGTCTGGGTG.............................................. 27 2 2 0.50 1 0 1
.......................................................................................TGTTAACTGTAATACTGTGTCT................................................... 22 1 2 0.50 1 1 0
................................................................................AATCTAGTGTTAACTGTAAGACTGTGTCT................................................... 29 3 2 0.50 1 0 1
.......................................................................................TGATAACTGTGAGACTGTGTCT................................................... 22 2 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAAACTGTGTCT................................................... 22 1 2 0.50 1 1 0
.......................................................................................TGTAAACTGTAAGACTGTGTCT................................................... 22 1 2 0.50 1 1 0
..............................GCAGTCGCTCAATTACCATG.............................................................................................................. 20 0 2 0.50 1 0 1
.......................................................................................TGTTAACTGTAAGTCTGTGTCT................................................... 22 1 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAGACTGGGTCTT.................................................. 23 1 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAGAATGTGTCT................................................... 22 1 2 0.50 1 1 0
........................................................................................GTTGACTGTGAGACTGTGTCT................................................... 21 2 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAGACTGAGT..................................................... 20 1 2 0.50 1 1 0
.......................................................................................TTTTAACTGTAAGACTGTGTCT................................................... 22 1 2 0.50 1 1 0
.......................................................................................GGTTAACTGTAAGACTGTGTCT................................................... 22 1 2 0.50 1 1 0
......................................................................................ATGTTAACTGTAAGACTGTGCCT................................................... 23 1 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAGACTGCGTC.................................................... 21 1 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAGACTGTGTGT................................................... 22 1 2 0.50 1 0 1
.......................................................................................TGTTAACTGTGAGACTGTGTCTTAG................................................ 25 2 2 0.50 1 0 1
.......................................................................................TGTTAACTGTAAGGCTGTGT..................................................... 20 1 2 0.50 1 1 0
......................................................................................TTGTTAACTGTAAGACTGTGTCT................................................... 23 1 2 0.50 1 0 1
.......................................................................................TGTTTACTGTAAGACTGTGTCT................................................... 22 1 2 0.50 1 1 0
........................................................................................GTTAACTGTAAGACTGTGTCTGC................................................. 23 2 2 0.50 1 0 1
.......................................................................................TGTTAACTCTAAGACTGTGT..................................................... 20 1 2 0.50 1 1 0
........................................................................................GTTAACTGTAAGACTGAGTCT................................................... 21 1 2 0.50 1 0 1
.......................................................................................TGTTAACTGTAAGACTGTGTCA................................................... 22 1 2 0.50 1 0 1
......................................................................................ATGTTAACTGTGAGACTGTGTCT................................................... 23 1 2 0.50 1 0 1
.......................................................................................TGTTCACTGTAAGACTGCGTCT................................................... 22 2 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAGACTGTGTCTCCC................................................ 25 3 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAGACGGTGTCT................................................... 22 1 2 0.50 1 1 0
.......................................................................................TGTTAACTGTCAGACTGTGTC.................................................... 21 1 2 0.50 1 1 0
.......................................................................................TGTTAACTGCAAGACTGTGTCC................................................... 22 2 2 0.50 1 1 0
..................................................ACATACTCGTACGGTGAATGTT........................................................................................ 22 1 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAGACTGT....................................................... 18 0 2 0.50 1 0 1
.......................................................................................TGGTAACTGTAAGACTCTGTCT................................................... 22 2 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAGACTGTGTTCT.................................................. 23 2 2 0.50 1 1 0
..................................................ACATAGTCGTACGGTGAATG.......................................................................................... 20 0 2 0.50 1 0 1
.......................................................................................TGTTAACTGTGAGACTGTCTCT................................................... 22 2 2 0.50 1 1 0
.......................................................................................TGTTAACTGTAAGACTGTGTCTACA................................................ 25 3 2 0.50 1 0 1
.......................................................................................TGTTAACTATAAGACTGTGTCTT.................................................. 23 1 2 0.50 1 1 0
.......................................................................................TGTTCACTGTAAGACTGTGT..................................................... 20 1 2 0.50 1 1 0
.......................................................................................TGTTAACTGTGAGACTGTGT..................................................... 20 1 3 0.33 1 1 0
.......................................................................................TGCTAACTGTGGGACTGTGTCT................................................... 22 3 4 0.25 1 1 0
.......................................................................................TGTTGACTGTGGGACTGTGTCT................................................... 22 3 5 0.20 1 1 0
.......................................................................................TGTTAACTGTGAGACTGTC...................................................... 19 2 6 0.17 1 1 0

Anti-sense strand reads

GGTCGGGTGTTACCTATTCCTGTTCTCTGTCGTCAGCGAGTTAATGGTACTGTATCAGCATGCCACTTACAACACAAACCTCAGGTTACAATTGACATTCTGACACAGAACCACCAACGGTCGGTTCGTTGTTTGCTACTGGTGGGTTTTGCCTTCGGTT

************************************.((((((((((((.(((((((((.((((((.(((((((...........))))))).)))))).))))))))).)))))))))..))).*********************************** 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droGri2 scaffold_8129:760-919 - dgr_1 confident CCA--GCCCACA---------------------------------------A-----TGGATAAGGACAAGAGAC---------------------------------------AGCAG--TCGCTCAATTACCATGACATAGTCGTACGGTGAATGTTGTGT-TTGGAGTCCAATGTTAACTGTAAGACTGTGTCTTGGTGGTTGCCAGCCAAGCAACAAA-------------CGAT--GACCACCCAAAACGGAAG--------------CCAA
droVir3 scaffold_12822:3936707-3936869 - dvi-mir-999 Known_mirbase ATAT-----------------------------------------------ATATATGGGATAAGGACA---GCG---------------------------------------AGTCG--CCGCTCAATTACCGTGACATAGTCGTACGGTGAATGTTGTGTA-TGGAGTCCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGTTAGCTAATCAACAG--CGACACATGAGACGCT--GAC----GGAAACGCAAG--------------TGAA
droMoj3 scaffold_6540:17209612-17209772 - dmo_1 confident GCT--GGCAGC----------------------------------------AT----T--AAAAGGGCA---GTG---------------------------------------AGTCG--CCGCTCAATTACCGTGACATAGTCGTACGGTGAATGTTGTTTA-TGGAGTCCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTG-CAGCCAAACAACAG--CGACCCCCAAAACACTTTGAC------AAACGGATG--------------TGGA
droWil2 scf2_1100000004943:11672692-11672871 - dwi_2 confident ACGCCGCCGACAACGAAAAGGACGACGACGACGACGACGC---------CAACG-------------------ACA---GCA----------------------------GCAAAGATGTCCCGCTCAATTACCATGACATAGTCGTACGGTGAATGTTGTTTA-TGGAGTCCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCAAACAACAAT-------------------AGC----TGGAACTCCAA--------------TCAA
dp5 2:6480682-6480794 - dps_134 candidate-rescued ------------------------------------------------------------------------------------------------------------------------------------------CATAGTCGTACGGTGAATGTTGTGTATTGG--ACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGTCAGCCAAGCAGCAAGCCGAA--CCGAACCGC-------------ACCGGAAG---TGGAAGTGT------
droPer2 scaffold_0:305992-306159 - dpe_7 confident CCGCCGCCGCA------------------------GCCGCCGC--CAGGAGATG---T---------------GAAGGAGCC----------------------------CAAAGGATG-CCCGCTCAATTACCATGACATAGTCGTACGGTGAATGTTGTGTATTGG--ACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGTCAGCCAAGCAGCAAGCCGAA--C------------------CGAACCGGAAG--------------TGGA
droAna3 scaffold_13340:8622510-8622625 - dan_3 confident AA-------------------------------------------------------------------------GGACCAA----------------------------AAAAGGATG--CCGCTCAATTACCCCGACATAGTCGTACGGTGAATGTTGTGTATTGGAAAGCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCTAGCCTAC----------------------------------------------------------
droKik1 scf7180000302388:1457996-1458127 + G--------------------------------------------------ATG-------------------AACGGGGAAAGGCAGCATCGGATCCACAGATC--CC-----AGCCA--TTGTTC------------------AGCTGATAAGGGAGCCCGACTGGCAAC---TATTACCTGGA---------------GCCCAACTGTCAATCAATAG--CATCCATCGACGTCC---------------TGGCCC--------------CGTT
droFic1 scf7180000454106:760385-760536 - CCGCCGAC---------------------------------------------G-------------------AACGGAGAATGGAAAAAGTAGAAAGG---AGAGAGGAGAAAGGATG--CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCATCAACAA--------------------------------------------------------
droEle1 scf7180000491212:2051737-2051863 - AAG-----------------------------------------------------------------------------------------------------------AAAAGGATG--CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGCTTGCCAGCCAGCC--CAG--CAA------------------------------------TACAA-TGTATCCAC
droEug1 scf7180000409490:921833-921968 - CCGCTGCCGTC------------------------GCCGC---------CCATG-------------------AAC---GAA----------------------------GAAAGGATG--CCGCTCAATTACCCTGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCAACAA--------------------------------------------------------
dm3 chr3R:17623948-17624091 - dme-mir-999 Known_mirbase CCGCCGCCGCC------------------------GACGC---TGTAGCCGATG-------------------AACGGAGAA----------------------------GAAAGGATG--CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACA---------------------------------------------------------
droSim2 3r:17135830-17135970 - dsi-mir-999 Known_mirbase CCGCCGCCGCC------------------------AC------TGTAGCCGATG-------------------AACGGAGAA----------------------------GAAAGGATG--CCGCTCAATTACCCCGACATAGTCGTACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACA---------------------------------------------------------
droSec2 scaffold_0:17996316-17996462 - dse_7 confident CCGCCGCCGCC------------------------GCCGCCACTGTAGTCGATG-------------------AACGGAGAA----------------------------GAAAGGATG--CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACA---------------------------------------------------------
droYak3 3R:18443913-18444063 - dya_4 confident CCGCTGA------------------------------------------------------------------AATCGAGAA----------------------------GAAAGGATG--CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCACAC--CAG--CCACAT---------------CAGCCACATCGGCCACAA-----------ACCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droGri2
CCA--GCCCACA---------------------------------------A-----TGGATAAGGACAAGAGAC---------------------------------------AGCAG--TCGCTCAATTACCATGACATAGTCGTACGGTGAATGTTGTGT-TTGGAGTCCAATGTTAACTGTAAGACTGTGTCTTGGTGGTTGCCAGCCAAGCAACAAA-------------CGAT--GACCACCCAAAACGGAAG--------------CCAASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCT................................................................................2221880.00376014552305
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCT................................................................................21289.001781708
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTC.................................................................................21256.001123082
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGT..................................................................................20247.00942470
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT...............................................................................23223.00461333
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCC................................................................................2226.5013112
.........................................................................................................................................ACATAGTCGTACGGTGAATGTT......................................................................................................................2226.0012102
.................................................................................................................................................................................TTAACTGTAAGACTGTGTCT................................................................................2025.501192
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA...............................................................................2325.001019
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT................................................................................2324.00844
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT..............................................................................2423.00606
....................................................................................................................CAG--TCGCTCAATTACCATG............................................................................................................................................1922.00440
.........................................................................................................................................ACATAGTCGTACGGTGAATGTTG.....................................................................................................................2321.50303
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC...............................................................................2321.50303
................................................................................................................................................................................GTTAACTGTAAGACTGTGTC.................................................................................2021.50330
................................................................................................................................................................................GTTAACTGTAAGACTGTGT..................................................................................1921.00220
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG...............................................................................2321.00220
.................................................................................................................................................................................TTAACTGTAAGACTGTGTCC................................................................................2021.00211
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCC..............................................................................2421.00202
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTAA.............................................................................2520.50110
...................................................................................................................GCAG--TCGCTCAATTACCATG............................................................................................................................................2020.50110
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCTGC..............................................................................2320.50110
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCA................................................................................2220.50110
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCCC.............................................................................2520.50101
...............................................................................................................................................................................TGTTAACTGTAAGACTGT....................................................................................1820.50110
.........................................................................................................................................ACATAGTCGTACGGTGAATG........................................................................................................................2020.50110
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTACA.............................................................................2520.50110
droVir3
ATAT-----------------------------------------------ATATATGGGATAAGGACA---GCG---------------------------------------AGTCG--CCGCTCAATTACCGTGACATAGTCGTACGGTGAATGTTGTGTA-TGGAGTCCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGTTAGCTAATCAACAG--CGACACATGAGACGCT--GAC----GGAAACGCAAG--------------TGAASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCT................................................................................221507491.0050749114535103173129494499420137670110348373964291907132727141433493107911505254949201177113678072420341691124314475641620907321700164588391240970247511039167535181048821767144290717671371825108584451534830757178304314395412769681206520145122917152231692270515116128282116414697755218848186553740139539
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCC................................................................................22110087.001008712564991220005710287103222010014311463101415121028528179113100000000000110100015229704122318290535432276237354851114146
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA...............................................................................2317866.0078662154416012174323744715587510325201401100318214486225155252212391471115322027819719314100000000000000000191261307053669653280908366717596219242247395463
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTC.................................................................................2115111.005111248437721792623222138951729281811312013381424391524392756573585362729451926153916742976133141371045320451024664051231537416215615311310415711410610599234233
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT...............................................................................2314027.0040273776428562412118146471141562653924144820119306079565210010930318354212416276478111020201001010011002470211580584723921813211411274799396654655134144
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCG................................................................................2212008.00200857154000000000000100000000000011101000000011410022202004210208200146020673263428173647216214841
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA..............................................................................2411837.0018370080185401424239693101000020046392969286511492154123227799940000000000000000000333201991371254471002553245407476
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT................................................................................2311786.0017861548115370196589131239410164314155136734732213542110011012628832310430107932073756738118115505996831715144443
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCT................................................................................2111384.0013847687419105010113166631362313334242247273411041111011010000000021521260233546263932251430211114103035
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGT..................................................................................2011340.00134012716323881814903143014421562417738783115511397425141345900000000100000000000416242012154340150200221013103025
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCA................................................................................2211192.001192199115014210005421021113181272295241124015181817193001000010010000000151960153218224856744354348429787
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAAA.............................................................................2511086.001086001801001008011225000001000183617651922025412875168318930000000000000000000300030891112160011101319214044
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTA..............................................................................241560.0056000110000000000000000000001100000002010000001211000000000001100002103934017211810971121406787
.................................................................................................................................................................................TTAACTGTAAGACTGTGTCT................................................................................201553.005539378402021001001001000111111000100000000011010000000000000630006300077212204164830223
.........................................................................................................................................ACATAGTCGTACGGTGAATGTT......................................................................................................................221410.0041026171321217030000024571197581377277623100120016400000011100100211042174091922315241610191812000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC...............................................................................231268.0026810406149105202123001113016114418710223100011324000000000000000000061120131115312312512756
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT..............................................................................241226.00226055010533500322114101232319833337037335100000000000000000001978025584710658231447
...............................................................................................................................................................................TGTTAACTGTAAGACTGTG...................................................................................191148.00148033001030610001102005000001210161226060100090010001020000000013010001142002113200121
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTC..............................................................................241123.001232221121002001000000070131000103390300000600100000000000000000100003624655101114040
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCAA...............................................................................231109.00109002010000000000000000002335203001024554000000000000000000001000402613300100133354
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCC..............................................................................241109.0010991401910000000000000110020102110211030000390000000000000000000002000010211045400000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG...............................................................................23199.009901202050201000000000300711101201102303400000000000000000000090010139100100012478
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTAA.............................................................................25172.007200200000000000000000001002520000703610620000000000000000000000000394101110010230
..................................................................................................................................................................................TAACTGTAAGACTGTGTCT................................................................................19170.0070119110201001001030000000221000000000000100000000000000000010001003031244302000001
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCC................................................................................23166.006625707000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................AACTGTAAGACTGTGTCT................................................................................18163.006301370103000000010000000010010000000110100000000000000000010002100055300322420012
.................................................................................................................................................................................TTAACTGTAAGACTGTGTCC................................................................................20161.006115703000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCCA...............................................................................23157.00570000000010001000000030030110100100233100000000000000000000001000079200000002357
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAT..............................................................................24155.005500001020000000000000100132100300102152200000000000000000000100000710000000031123
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCCT...............................................................................23149.00490000000000000000000000000010000000010020000000000000000000001000042158114611424
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTTA.............................................................................25144.00440000000010000000000000000110000010231000000000000000000000010000025039205110131
...............................................................................................................................................................................TGTTAACTGTAAGACTG.....................................................................................17144.004400000000000000000000000000000000000000000112120211310033021200000021100000030020
.........................................................................................................................................ACATAGTCGTACGGTGAATGTTG.....................................................................................................................23142.00420011001120000040112301200110101001110100000000000000000000008201010000000010001
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCA..............................................................................24136.00360000011000011000000010011011000000043032000000000000000000020000013400010011002
...............................................................................................................................................................................TGTTAACTGTAAGACTGT....................................................................................18134.00340600001000000100000000101001210000010001000000000000000000003000033401000100012
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTC.................................................................................22129.002901202000000000001010000000000000000000000000000000000000000005001000012130000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTTT.............................................................................25124.00240010001000000000010000210114000001010000000000000000000000001000010111200000021
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTATA.............................................................................25122.00220000000000101000000000000100000010000010000000000000000000000000045110011020011
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCG................................................................................23120.002001800000000000000000000000000000000000000000000000000000000000000000001010000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCAA.............................................................................25117.00170000000000001000000000000001100020131120000000000000000000010000000000000011001
...............................................................................................................................................................................TGTTAACTGTAAGACTGTCC..................................................................................20116.001601302000000000000000000000000000100000000000000000000000000000000000000000000000
.........................................................................................................................................ACATAGTCGTACGGTGAATGT.......................................................................................................................21115.00150040001000000000000000000010000000000000000000000000000000110000400020010000000
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCC................................................................................21114.00141931000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCTT...............................................................................22114.00140050000010001000000000000000000000000000000000000000000000001000002200000020000
................................................................................................................................................................................GTTAACTGTAAGACTGTGTC.................................................................................20113.00130061000000000000001000000000000000000000000000000000000000001000001020100000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCAAA..............................................................................24213.00260020000000000000000000020000000020007020000000000000000000000000033200000001002
.................................................................................................................................................................................TTAACTGTAAGACTGTGTCG................................................................................20112.001201200000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................TCG--CCGCTCAATTACCGTG............................................................................................................................................19112.00120100000000000010000000000011100100000001000000010000100000010000000011000000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTAA................................................................................22112.00120000000000000000000010000000000100001100000000000000000000000000012300000000011
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCCC.............................................................................25110.00104000010000000000000010000000010000000000000000000000000000000100000000002000000
....................................................................................................................................................................................ACTGTAAGACTGTGTCT................................................................................17110.00100000000000000000000000000000000000000000000000000000000101000000111200000020001
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTCA.............................................................................25110.00100000000000000000000000000000000100010000000000000000000000000000000020100100220
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAC..............................................................................24110.00100000001000000000000000000000000000000020000000000000000000000000020120000010010
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTT.................................................................................21110.00100000000000000100010000000000000000010000000000000000000000003100010020000000000
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCTA...............................................................................2219.0090020000000101200000000000000000000000010000000000000000000000001000000000000001
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGA..................................................................................2019.0090000000101000000000000000000010000000000000000000000000000002000010000000011100
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCT..............................................................................2419.0090010000000000000000000000000001000000000000010000000000000001000000000010010120
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGG..................................................................................2019.0090800000000000000000000000000000000000000000000000000000000000000000010000000000
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCTA...............................................................................2418.0080000003000000100000000000100000000001000000000000000000000010000000000000000010
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCCA.............................................................................2518.0080000010000000000000010010000000000000002000000000000000000000000000020000000100
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTA.................................................................................2118.0080002001000000000000000000000101100010000000000000000000000000000010000000000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCCT.............................................................................2518.0081100000000000000000000000000000000000000000000000000000000000000010002001200000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTCC.............................................................................2517.0070100000000000000000000000000020200000001000000000000000000000000000000001000000
droMoj3
GCT--GGCAGC----------------------------------------AT----T--AAAAGGGCA---GTG---------------------------------------AGTCG--CCGCTCAATTACCGTGACATAGTCGTACGGTGAATGTTGTTTA-TGGAGTCCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTG-CAGCCAAACAACAG--CGACCCCCAAAACACTTTGAC------AAACGGATG--------------TGGASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCT................................................................................22172344.00723441316820481064218663213746449
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCC................................................................................2215784.0057841821526571310
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCT................................................................................2111394.00139412621119273837
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTC.................................................................................2111178.001178799160305510115
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT...............................................................................231996.0099688802724533469
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGT..................................................................................201515.00515175143271772
.........................................................................................................................................ACATAGTCGTACGGTGAATGTT......................................................................................................................221312.003122812172720424
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA...............................................................................231262.00262735636461338
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC...............................................................................231177.0017737820374530
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT................................................................................231125.0012518418383116
.................................................................................................................................................................................TTAACTGTAAGACTGTGTCT................................................................................20196.009666034167
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT..............................................................................24168.006805193806
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCA................................................................................22163.0063152816175
....................................................................................................................TCG--CCGCTCAATTACCGTG............................................................................................................................................19157.0057191466120
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG...............................................................................23150.005080132513
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA..............................................................................24143.004313160239
...............................................................................................................................................................................TGTTAACTGTAAGACTGTG...................................................................................19132.00327171421
..................................................................................................................................................................................TAACTGTAAGACTGTGTCT................................................................................19130.00301602372
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAAA.............................................................................25125.00251800007
.........................................................................................................................................ACATAGTCGTACGGTGAATGT.......................................................................................................................21120.0020701291
...............................................................................................................................................................................TGTTAACTGTAAGACTGTCC..................................................................................20116.00160000160
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCC................................................................................21115.00151000122
................................................................................................................................................................................GTTAACTGTAAGACTGTGTC.................................................................................20113.00131000111
.........................................................................................................................................ACATAGTCGTACGGTGAATGTC......................................................................................................................22113.00130000130
.....................................................................................................................CG--CCGCTCAATTACCGTG............................................................................................................................................18112.0012602040
...................................................................................................................................................................................AACTGTAAGACTGTGTCT................................................................................18112.0012600051
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCG................................................................................22111.0011102521
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCTT...............................................................................2219.009900000
.........................................................................................................................................ACATAGTCGTACGGTGAATG........................................................................................................................2017.007200113
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTGC................................................................................2217.007010060
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTAC................................................................................2217.007000250
.................................................................................................................................................................................TTAACTGTAAGACTGTGTCC................................................................................2016.006100050
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCTA...............................................................................2216.006600000
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCC................................................................................2315.005000050
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCTAA..............................................................................2315.005500000
...............................................................................................................................................................................TGTTAACTGTAAGACTGT....................................................................................1815.005002300
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTC..............................................................................2414.004010102
...................................................................................................................GTCG--CCGCTCAATTACCGTG............................................................................................................................................2014.004020110
droWil2
ACGCCGCCGACAACGAAAAGGACGACGACGACGACGACGC---------CAACG-------------------ACA---GCA----------------------------GCAAAGATGTCCCGCTCAATTACCATGACATAGTCGTACGGTGAATGTTGTTTA-TGGAGTCCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCAAACAACAAT-------------------AGC----TGGAACTCCAA--------------TCAASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCT................................................................................221482108.00482108354576914074671599494931
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCC................................................................................22131935.003193531701281749140
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCG................................................................................2215759.00575957480236
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTC.................................................................................2114948.004948396968107179625
.................................................................................................................................................................................TTAACTGTAAGACTGTGTCT................................................................................2013791.003791357272817122
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT...............................................................................2311888.00188841130452371165
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCT................................................................................2111631.0016313718831924334
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT................................................................................2311033.00103377591684149
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA...............................................................................231848.008481054922345327
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGT..................................................................................201509.005095297761310
.........................................................................................................................................ACATAGTCGTACGGTGAATGTT......................................................................................................................221433.00433188144122105
.................................................................................................................................................................................TTAACTGTAAGACTGTGTCC................................................................................201342.003423420000
..................................................................................................................................................................................TAACTGTAAGACTGTGTCT................................................................................191321.00321248103258
...................................................................................................................................................................................AACTGTAAGACTGTGTCT................................................................................181203.0020314343548
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCA................................................................................221104.0010438101946
...............................................................................................................................................................................TGTTAACTGTAAGACTGTCC..................................................................................20188.0088880000
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCC................................................................................23180.0080790010
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT..............................................................................24177.0077604859
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA..............................................................................24167.0067051601
.................................................................................................................................................................................TTAACTGTAAGACTGTGTCG................................................................................20166.0066651000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC...............................................................................23137.00371610515
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAAA.............................................................................25130.0030072210
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCC................................................................................21128.0028271000
..................................................................................................................................................................................TAACTGTAAGACTGTGTCC................................................................................19128.0028280000
...............................................................................................................................................................................TGTTAACTGTAAGACTGT....................................................................................18124.0024184110
.................................................................................................................................................................................TTAACTGTAAGACTGTGTC.................................................................................19121.0021190002
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCG................................................................................23118.0018180000
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCTT...............................................................................22118.001819026
...............................................................................................................................................................................TGTTAACTGTAAGACTGTCG..................................................................................20118.0018180000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG...............................................................................23117.0017420011
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTC.................................................................................22117.0017100034
...............................................................................................................................................................................TGTTAACTGTAAGACTGTG...................................................................................19116.001661117
...................................................................................................................................................................................AACTGTAAGACTGTGTCC................................................................................18114.0014131000
.........................................................................................................................................ACATAGTCGTACGGTGAATGT.......................................................................................................................21114.001444222
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTGG................................................................................22113.0013130000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTAC................................................................................22113.0013130000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGG..................................................................................20112.0012110001
.........................................................................................................................................ACATAGTCGTACGGTGAATGTTG.....................................................................................................................23111.001100083
................................................................................................................................................................................GTTAACTGTAAGACTGTGTC.................................................................................2019.00926001
...............................................................................................................................................................................TGTTAACTGTAAGACTGTC...................................................................................1918.00850111
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCCT...............................................................................2317.00740201
.............................................................................................................................................................................AATGTTAACTGTAAGACTGTGTCT................................................................................2416.00660000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTTCT...............................................................................2316.00600015
..................................................................................................................................................................................TAACTGTAAGACTGTGTCG................................................................................1916.00660000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTA.................................................................................2116.00610005
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTGC................................................................................2215.00550000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTAA................................................................................2215.00520210
..................................................................................................................................................................................TAACTGTAAGACTGTGTC.................................................................................1815.00550000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCT..............................................................................2415.00510013
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTTC................................................................................2215.00550000
dp5
------------------------------------------------------------------------------------------------------------------------------------------CATAGTCGTACGGTGAATGTTGTGTATTGG--ACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGTCAGCCAAGCAGCAAGCCGAA--CCGAACCGC-------------ACCGGAAG---TGGAAGTGT------SizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCT................................................................................22182830.0082830717258473778209623464153493359267813815295
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTC.................................................................................2118683.008683711991232134813212565266737541700
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCC................................................................................2216526.0065263417510894997164222597220
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGT..................................................................................2013474.003474790258734616587246420570
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCT................................................................................2112643.002643424617601641277416
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT...............................................................................231450.00450019741229705333448
...............................................................................................................................................................................TGTTAACTGTAAGACTGTG...................................................................................191346.003460750122241017161
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCA................................................................................221321.00321015351410191358445
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT................................................................................231245.00245541995652191512
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA...............................................................................231241.002410135023721152380
.................................................................................................................................................................................TTAACTGTAAGACTGTGTCT................................................................................201217.002174181017246003
................................................................................................................................................................................GTTAACTGTAAGACTGTGTC.................................................................................201201.00201018603123006
................................................................................................................................................................................GTTAACTGTAAGACTGTGT..................................................................................19168.006806600100001
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC...............................................................................23155.005508578710163
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA..............................................................................24149.0049028001400700
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGC..................................................................................20145.004501040111010
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCC................................................................................21144.0044126214001000
..................................................................................................................................................................................TAACTGTAAGACTGTGTCT................................................................................19137.003703001311010
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTT.................................................................................21136.003608000312193
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAAA.............................................................................25130.003012010200600
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCTT...............................................................................22124.002402400000000
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCC................................................................................23123.002300419000000
...................................................................................................................................................................................AACTGTAAGACTGTGTCT................................................................................18122.002201605100000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCG................................................................................22122.00221321132360
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT..............................................................................24122.00220600136150
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCA................................................................................21117.001701600000100
...............................................................................................................................................................................TGTTAACTGTAAGACTGT....................................................................................18116.00160500011261
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTA.................................................................................21115.00150206100042
...............................................................................................................................................................................TGTTAACTGTAAGACT......................................................................................16112.00120000000507
.................................................................................................................................................................................TTAACTGTAAGACTGTGTC.................................................................................19111.00110800001011
...............................................................................................................................................................................TGTTAACTGTAAGACTGTCC..................................................................................20111.001101010000000
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCTA...............................................................................22111.001101100000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCAA...............................................................................23111.00110900000110
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG...............................................................................23111.001101100000000
................................................................................................................................................................................GTTAACTGTAAGACTGTG...................................................................................18110.00100900000001
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTC.................................................................................2219.0090403010010
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGA..................................................................................2018.0080201030011
.................................................................................................................................................................................TTAACTGTAAGACTGTGTCC................................................................................2017.0070115000000
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGT..................................................................................2117.0070001022110
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTAA................................................................................2216.0060400000200
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCAAA..............................................................................2416.0060600000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTTT.............................................................................2515.0050000000050
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTAC................................................................................2215.0050023000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCCA...............................................................................2315.0050200120000
.................................................................................................................................................................................TTAACTGTAAGACTGTGT..................................................................................1814.0040300000001
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTAA.............................................................................2514.0040200000020
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTGC................................................................................2214.0040004000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCCT...............................................................................2314.0040102001000
..........................................................................................................................................CATAGTCGTACGGTGAATGTT......................................................................................................................2114.0040300010000
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCAA...............................................................................2214.0040400000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTA..............................................................................2414.0040010000021
...............................................................................................................................................................................TGTTAACTGTAAGACTGTT...................................................................................1913.0030200010000
droPer2
CCGCCGCCGCA------------------------GCCGCCGC--CAGGAGATG---T---------------GAAGGAGCC----------------------------CAAAGGATG-CCCGCTCAATTACCATGACATAGTCGTACGGTGAATGTTGTGTATTGG--ACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGTCAGCCAAGCAGCAAGCCGAA--C------------------CGAACCGGAAG--------------TGGASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCT................................................................................22150473.005047369954956116115536160155810
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTC.................................................................................2114470.0044703153494512681944549
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGT..................................................................................2013077.0030779154115831385935
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCC................................................................................221737.00737520438487345
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCT................................................................................211676.00676124924503484
.........................................................................................................................................ACATAGTCGTACGGTGAATGTT......................................................................................................................221338.003381417312916015
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT...............................................................................231327.00327624149110785
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT................................................................................231214.0021438116459024
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCG................................................................................221209.0020918491681
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCA................................................................................221152.001522462286212
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA...............................................................................231134.0013411472518267
.................................................................................................................................................................................TTAACTGTAAGACTGTGTCT................................................................................201133.00133793601044
...............................................................................................................................................................................TGTTAACTGTAAGACTGTG...................................................................................19159.005901208345
................................................................................................................................................................................GTTAACTGTAAGACTGTGTC.................................................................................20140.00400290137
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC...............................................................................23134.00340304261
...................................................................................................................................................................................AACTGTAAGACTGTGTCT................................................................................18134.00342160232
.........................................................................................................................................ACATAGTCGTACGGTGAATGTTG.....................................................................................................................23133.00330008223
...............................................................................................................................................................................TGTTAACTGTAAGACTGT....................................................................................18127.00271641213
..................................................................................................................................................................................TAACTGTAAGACTGTGTCT................................................................................19123.0023761522
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA..............................................................................24123.00230149000
................................................................................................................................................................................GTTAACTGTAAGACTGTGT..................................................................................19123.00230170114
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGC..................................................................................20115.00152001102
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAAA.............................................................................25114.0014275000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT..............................................................................24111.0011100424
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTA.................................................................................21110.0010000451
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTT.................................................................................2119.009020151
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCAA...............................................................................2318.008070010
.................................................................................................................................................................................TTAACTGTAAGACTGTGTCC................................................................................2017.007700000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG...............................................................................2317.007020140
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGA..................................................................................2017.007000421
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGT..................................................................................2116.006000213
.........................................................................................................................................ACATAGTCGTACGGTGAATGT.......................................................................................................................2115.005010130
...............................................................................................................................................................................TGTTAACTGTAAGACTGTC...................................................................................1915.005210002
.................................................................................................................................................................................TTAACTGTAAGACTGTGTC.................................................................................1915.005120011
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCTT...............................................................................2215.005050000
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCTA...............................................................................2214.004030010
.................................................................................................................................................................................TTAACTGTAAGACTGTGT..................................................................................1814.004020002
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCCA...............................................................................2314.004031000
droAna3
AA-------------------------------------------------------------------------GGACCAA----------------------------AAAAGGATG--CCGCTCAATTACCCCGACATAGTCGTACGGTGAATGTTGTGTATTGGAAAGCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCTAGCCTAC----------------------------------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCT................................................................................22191653.009165336182745461153491072658754
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT...............................................................................2315606.00560610523498127123905
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTC.................................................................................2111066.00106639944190153586
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT..............................................................................2411060.001060712134183733
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCC................................................................................2211012.001012129111241351
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCT................................................................................211956.0095634614150173372
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA...............................................................................231596.0059610241885151272
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGT..................................................................................201572.00572103212680351
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT................................................................................231517.0051781006146392
.................................................................................................................................................................................TTAACTGTAAGACTGTGTCT................................................................................201131.00131321132866
.........................................................................................................................................ACATAGTCGTACGGTGAATGTT......................................................................................................................22197.00977111401226
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTTT.............................................................................25154.0054500251311
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCTT...............................................................................22151.005111012334
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA..............................................................................24144.00442429126
..................................................................................................................................................................................TAACTGTAAGACTGTGTCT................................................................................19139.00396203820
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCA................................................................................22136.0036862947
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG...............................................................................23132.00322008418
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC...............................................................................23125.00251111633
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCG................................................................................22124.00248001213
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCTTT..............................................................................23122.00221000219
...................................................................................................................................................................................AACTGTAAGACTGTGTCT................................................................................18118.00182100411
................................................................................................................................................................................GTTAACTGTAAGACTGTGTC.................................................................................20114.0014101165
...............................................................................................................................................................................TGTTAACTGTAAGACTGT....................................................................................18114.0014020309
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTC..............................................................................24112.0012010155
...............................................................................................................................................................................TGTTAACTGTAAGACTGTG...................................................................................19112.0012100533
.........................................................................................................................................ACATAGTCGTACGGTGAATGT.......................................................................................................................21111.0011130115
.........................................................................................................................................ACATAGTCGTACGGTGAATGTTG.....................................................................................................................23111.0011200414
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTA.................................................................................2119.009000036
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAAA.............................................................................2519.009017010
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCC................................................................................2118.008250001
................................................................................................................................................................................GTTAACTGTAAGACTGTGT..................................................................................1917.007000142
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCCT...............................................................................2317.007000313
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTA..............................................................................2417.007061000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTT.................................................................................2117.007100312
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCT..............................................................................2416.006100005
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTTCT...............................................................................2316.006000015
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTC.................................................................................2216.006100113
.................................................................................................................................................................................TTAACTGTAAGACTGTGTCTT...............................................................................2115.005200003
...............................................................................................................................................................................TGTTAACTGTAAGACTGTTCT.................................................................................2154.20211000218
..............................................................................................................................................................TGTGTATTGGAAAGCAATGTTAACT..............................................................................................2514.004010111
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAC..............................................................................2414.004003100
droKik1
G--------------------------------------------------ATG-------------------AACGGGGAAAGGCAGCATCGGATCCACAGATC--CC-----AGCCA--TTGTTC------------------AGCTGATAAGGGAGCCCGACTGGCAAC---TATTACCTGGA---------------GCCCAACTGTCAATCAATAG--CATCCATCGACGTCC---------------TGGCCC--------------CGTTSizeHit CountTotal NormTotal
No Reads
droFic1
CCGCCGAC---------------------------------------------G-------------------AACGGAGAATGGAAAAAGTAGAAAGG---AGAGAGGAGAAAGGATG--CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCATCAACAA--------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
AAG-----------------------------------------------------------------------------------------------------------AAAAGGATG--CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGCTTGCCAGCCAGCC--CAG--CAA------------------------------------TACAA-TGTATCCACSizeHit CountTotal NormTotal
No Reads
droEug1
CCGCTGCCGTC------------------------GCCGC---------CCATG-------------------AAC---GAA----------------------------GAAAGGATG--CCGCTCAATTACCCTGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCAACAA--------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
CCGCCGCCGCC------------------------GACGC---TGTAGCCGATG-------------------AACGGAGAA----------------------------GAAAGGATG--CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACA---------------------------------------------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCT................................................................................2211396801.0013968010000284117237198354961537125606112052642012970111026670016587206067783237947637745627196799122332318240951431368894814544611991781556651661000000000000000000833823665593926231261662131082233405030234144125390240923862748291492941053589155301483534114205633201151237426750013239649511845303434363604174812568206665122268672000195181101029910231296818466834156512342179108617989521278138847663551851918224730285017792710722675330625022389251123529023333757178523008778168110853037046066067381808637839911167953812122764711151883167144237822733495003371005123513529901952235976411111172844219479151911510982445095162495091516392290168001782141523105376509469551385681546312491380332439121526155419861926180661810632584154288520131737331387311432396128971073639525861440029571514126451652020521417676757462261174731333800847659455194774260902008120842122612394320741018861447369771558737961964220817756966097815556130184841613977516336498668971138861754096100771128106352211681580374871274698251066195913870228973531814026
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA...............................................................................23132602.003260200000010000000100100792110570000000038159744184584924654929903938218000000000000000000000002210190001011000204403001080101010313004113450180161593113313150000312000011930320729514112184240719429106608133000000002002529016201828221055151002013084111063211732051146211000008835500300091676732181846174543774432108200059035000109033547712454123747315915720515458484516820656356932834972530516314212572976427211359323307332205394936221973677246531063156241101366685616651967538837719451782849726223160527338410583027566225161391030
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTC.................................................................................21126690.00266900000400001000010302020442130434102128271201690149617822347771210720373414419005110000000000000000028421827110002120037043601000076011432001000133190779170117051520473010359164116000014000020385986172527194437173449831852201341332375243317013418104822032292271854721873271541602293735424640015025304821920113501200025311737752592986374110160101451921331357510526210017302541122211192721794383512162091622094181335218398309223141311593976131510156387519918722406994093775310461459621511544721593431001172457125125625135323153648810183466911515856339917141252619917817610316912747889282080
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT...............................................................................23124983.002498300000000000000100400611530423000000001223101511218451413162314454073101401500000000000000000000022550100000100010010000005000100010100001220090212815122944226000003000042766244222730494732674151722901000106700851050633056727651913184120202201682326421000014345340000125270000001924129377346181219111886421884170028594323002328053173416076261272593087195141933383098712393521458212415441843232278935211517961197448342984017223506525895696822950773771582073872123292689023430247338613423132071811239954118341736120215162163141422823411320115515724061969510
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTATC.............................................................................25121859.00218590000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000140107849000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCC................................................................................22121698.00216980000200000001000002045136009000000001815161820125401161513122476722017010000000000000000000003040223261020163101701455001019011540321200102814080894201442218000004000012416334236250867589233570762911283118856482046666052223237137046148304265014912101137900016114581101040950000002520225586253030511830328335818513925941655364001060223012132491438311146814235246514312227913947696181262161245281149924915422541634105526314319317312620523775495145504469303895841161746714323366309820718526558255391122213259851385135330265692001692922823240
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCT................................................................................21119448.0019448000000000000001000201503021504613188290120911611249115461041015131042600000000000000000000026352531202001310001100120100003816466432100104136632360433417121061513012800000300001123920111426222816222572831022169028192219454472029664763391520781465221001115292320310783002061807170514000000176192731414916291960104583021706044210043172565427518183126102611319613752153111558424363114658925333262212389912683897658674691728976361441402221692229093105741072776291102402871238811929161294993711192432982201091703981911323142989749876811899101569170145961345
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT................................................................................23115148.001514800003200000000000040100100201699980123547204332510591025420410010000000000000000002815710011000301105111111251141017811001111459331170281879211015100000010000411414071113189141371033650211004001562240151004911761121169026420212101703596000306101819018118150000001115314235131052340921025139116200230001521027113712997012364012031518275135222910111221337265752314417125342412414017643972766885174591412331224911336264215647174258463173236102830334939537758212917192526498223401074911480123511774459927
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGT..................................................................................20110714.001071400001000000000500000021905141923286880522912211217523422310340100660000000000000000008101211000000000000005110000110000000000000109122457056139709740156742000000000047171855645816811184105007761107614506347252010233852885308848030720901253012700412326020002400420013191010171038101569913639221222800005304704760201634228425353912546810185925146931894105715131118147891731373281344564521058331148163020291363113814143156667383719113715388931811020986034394759521542914660
.........................................................................................................................................ACATAGTCATACGGTGAATGTT......................................................................................................................2214914.0049140000800112101101002020020200145477001334110912120751827100008830000000000000000076613953129155171912520421651841217352623212645584130312848026140150641302151200200000002120062018422622610115000007057346201511611801270079245717441014935280076566000106400000200030007941182436411423524158133162005900002616045101197541010311882131161043191741642912915762192828310241319213263530522772241349416881451213920220145941111620232314221113925397373548412951131030
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA..............................................................................2414350.0043500000000000000000000011100000000000034166311612516341442200000000000000000000000000000000010000000000100000000000000000301000011100001000000000029885756172376010402111700000000000002501000300160300002039231215000502150000029670000000002120524891628000001002101000104404100106100000010100000143654874069068198602000231271262621064449363117707110011229333010221011002038921861455004010
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCA................................................................................2213137.00313700001200301110000030010010150000000011412083004005972101000000000000000000000363440000200300800200000010100100000100001330301121201011770000010000110201553387163759010001200210292702203112902402103520060043414590006051000000161700000010044281610256311711447007211300220481101333151100116022114101113111054178281663519420148060227685911224141418123349263823713171112255860742181101232627215272012288018050
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTC..............................................................................2412123.00212300000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000010000000000010000000000001000010000000000000300000000000000000000000000000000000000000001327766000000000100100101000000000000000000010001000000011000000001100000000000000000000000100210005110
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAAA.............................................................................2511910.001910000000000000000000000100000000000002110100124105004130200000000000000000000000000101800200000000000000000000000000000000000000000000000000000444292871503911803010000000000000000000000000010000001721720000180000010790000000001021641291735727000000000100000001000000000000000000000000392754017857351714010003110132000421127245201010078513700000000000100718115000000
.................................................................................................................................................................................TTAACTGTAAGACTGTGTCT................................................................................2011234.00123400000000000000000000000000110000000001000010000020200000000000000000000000000012000000010001000000001100100000000000010000000102100000000000100002011000000000020380134712018010844981104004900600000000004000000000000010101015161410558100110001000020001200711103200130100300111157451832011352602736294770562630010232371131111014116637229142336741181837140
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCATC..............................................................................2411220.0012200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000863357000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCG................................................................................2211075.00107500000000010000000110000100100000000000000000000021201000000000000000000000000000000000004001000000000300000000000000410301018051320000000000000000110000000000000010101226012022160718501062000102011100000005000000000000000001120001200810000000000160210360600011911100000100101224332424282549414213946124301432602534829000100021112002001726311212120
.........................................................................................................................................ACATAGTCATACGGTGAATGT.......................................................................................................................2111035.001035000000000000000000001200002000000000001000100011101110001000000000000000000002220000000100210150010010000300000000002000000000002000000000022200052633100300000000110899081013030145136004017243400001100000022200000222313642230233113131012000030011410004010131062225132307144065540505160553421117492320123215062111225785185142171242864781214101367310033823830
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT..............................................................................2411031.00103100001000000000000000000200100000000000110020102000211000000000000000000000001000000000000001000000000000000000000000000200120003000000000002220113012000000000000000004020032000308200010030410001050000001000000014003011101100110012000010122440314221503418911204602141612101711211207029015191216130120235264227404247129544471140125534813912141027491060
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC...............................................................................231897.008970000100000000000010000110010000000000000022001007120000011100000000000000000010120001000003000011000010001000001000228050148010900000000000041021411040111102000000000710060044190705000000150000000100000000010000001003411951595272000381800330210021041201410306410100011111021024309286464123540220231931101355151181214142710272101031443433120545655320115390
...............................................................................................................................................................................TGTTAACTGTAAGACTGT....................................................................................181841.0084100000000000000010000010000079119112026000000000000000000000000000000000000000000201010000000000000000000030000500000000061000000013851100000000000000001000000000000000000024011372120197011340000060000000000003000000000001000000002200000010000000001000001000000000000010011111010204061101100025570000000000101010000010100000000500001101010
...............................................................................................................................................................................TGTTAACTGTAAGACTGTG...................................................................................191762.0076200000000000000000000000000133182333500000000000000100000000100000000000000000413000000000000000000000000000000000000020000000002422001000000002100001102004110200100100217058404923446310501011010010000000022012000000000001204144444144104393610000011000001101010400201300042421103011000403050015141728101000110011006014001010010011013020001031230
.........................................................................................................................................ACATAGTCATACGGTGAATGTTG.....................................................................................................................231688.0068800001000000000000000000000000000000020001231001110110000010000000000000000000010000701200013106000001501340030000100120100140000000000000000000312351630020000010200067060011101004070020004000000000100000000000000211573002010311000010000020031521420101220211021102001531100305011011534572319439242310173374101137702014205248252111341537313061311020
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG...............................................................................231613.00613000000000000000000000000000000000000001000000200000000000000000000000000000000000000000000000000000000000000000000004101021302110000000000002371002130200000000000000440200130109010000000913000000000000000100000000003021010000300000300000040000180100100800000000403010121621101213110000494430612033015345172882201112010200300103109132040019110
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCCA...............................................................................231552.0055200000100000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000857211013000020000000030000000000000000000000027030000108000001500000000000002154932200002000000000000000000000000000000020000084510731052103701120521424120131218141612000772528000202400002411721603000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAT..............................................................................241544.0054400000000000000000000000000000000000000100000000010001000000000000000000000000000000000000001000000000002000000000000000000000000000000000002400000011000300000000006002010000000102000000010210002020000000000000000003022112210200012541430000000000012010000010000000000110000605017230100021641010053244102001022100000000201400012000000
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGT..................................................................................211505.00505000000000000001000000000000000000011000000200000000000000000000000000000000010010000000000000000000000000000000000000100050701012000000000000000000011010000000000300118011021040100140000104000100000000000000000000010011002022110000000001000200001800000002000000001000011171027031200221142445217501160160670119600002020010416933132214020
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTC.................................................................................221483.0048300000000000000000000000200100000000000000100001000100000000000000000000000000241000000000000000000000000000000000000310010231911000000000000000000000020100000000000000960300321402150000107101000000200000001000000210212100122022440050000100030001210200000110000100016010105040120406401272425342120310601802811317912320011302035723424101040
..................................................................................................................................................................................TAACTGTAAGACTGTGTCT................................................................................191300.00300000000000000000000000000000000000000100000000010010000000000000000000000000011200000100000010000000000000000000100004000001101009600000000000000002100100000000020001557160300117122020000601021000000000000000000000000100100101100001000000001001000001001200010010000020001000721011208101058913311041111154020312141020002123420110201020
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAC..............................................................................241299.00299000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000001100000000000000000000000000000000002000000000000000000100000000000000000010000101010000016898000000000000100000000000000000000000040100010000001021000102022000100011000000000000100000000010
................................................................................................................................................................................GTTAACTGTAAGACTGTGTC.................................................................................201279.002790000000000000000000010000120010300000110000000000011000001100000000000000000111000000000000010000000000030000000000001000001319022100000000000000000010100200000002000003301001411030100001030001000001000000000000002020011020121101521000000010213000110003001000210002220110609270023102121330001011020520300921357141324300512410710030
...................................................................................................................................................................................AACTGTAAGACTGTGTCT................................................................................181261.00261000000000000000000000000011000000000000000000000000000000000000000000000000032300000000000000000000000000000000000001000000001001000000000010100111000000000000200001321008002101905010000511311000000000000000000000000010020110100100000000000000000000000000000000010202000031426040501601231041428210101012112080010101002010022211000000010
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCTT...............................................................................221241.002410000000000000000000000000000000000000000000000000000000000000000000000000000102010000000000000100000000000000000000000000001000000000000000001000000112002000000000005303000123010500000000100000001000000000000001003021000100000000320000002020020113002136001201000111013417040425201053340000101401111142041112421510100410010329330
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCC................................................................................211238.002380000000000000000000000000010000000000000000000001001000000000000000000000000002100000000000000000000000000000000000000000110010000000000000111000000300030000100052000100002000011300000040100000000000000000000007021000301220030002000000000112000000000002000011000101105285263821310001011050010001426230002528130022302001100000210210
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCAA...............................................................................231178.001780000000000000000000000000000000000000201010000000000100000000000000000000000010000000000000000000000000000000000000000000000010000000010000050001030200000000000000000000000001000300000001304000000000000030000000000000112002200000000001000000001000000000000000000100003262213290900000101210000312410010001111000000000002001412000000
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCTA...............................................................................221166.001660000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030001112002120000000000000001000001010200000000001000000000000000000000000000000000000000730010000000000002000000000000000000007264170707101002000000000010160001101114020200700000502301001130
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCCT...............................................................................231155.0015500000000000000000000000000000000000001000000000001000000000000000000000000000000000000000000000000000000000000000000100000000200000000000000110300001100000000000000010000000000000000000100010000000000001000000000000001101001100011000000001000100120000000000100402000016120131501011411050010043341112023121200001001011243122108010
droSim2
CCGCCGCCGCC------------------------AC------TGTAGCCGATG-------------------AACGGAGAA----------------------------GAAAGGATG--CCGCTCAATTACCCCGACATAGTCGTACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACA---------------------------------------------------------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCT................................................................................221710080.007100805108171993030119347233455586479462154417150111212761868855114
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCC................................................................................22169628.0069628637871912329018001798614412083333000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTC.................................................................................21121010.00210109156361398231917540623307180215177792480000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCG................................................................................22112616.001261610906665103510022112100000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA...............................................................................2318424.0084242944357370026421986186012162394352000
.................................................................................................................................................................................TTAACTGTAAGACTGTGTCT................................................................................2014602.0046024126802831800353710102001000
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT................................................................................2313656.00365629571222532001011115629101500000
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCT................................................................................2111965.00196553875803310032933614210315810106
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA..............................................................................2411930.001930205800440302713406341550000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGT..................................................................................2011792.00179233190512747840226823525209000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT...............................................................................2311632.0016325315514210044127811480722105000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAAA.............................................................................2511012.00101200090018713543023213231000
.................................................................................................................................................................................TTAACTGTAAGACTGTGTCC................................................................................201554.00554503143700000000000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCA................................................................................221488.0048883611500504614212614212000
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCC................................................................................231383.0038335452400000000000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCG..............................................................................241371.0037100002035100000000000
..................................................................................................................................................................................TAACTGTAAGACTGTGTCT................................................................................191336.0033629031410033886000000
.........................................................................................................................................ACATAGTCGTACGGTGAATGTT......................................................................................................................221289.00289946281124925201751541246
...................................................................................................................................................................................AACTGTAAGACTGTGTCT................................................................................181288.0028823165000658126000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTG...................................................................................191286.00286303014128423225126012000
...............................................................................................................................................................................TGTTAACTGTAAGACTGT....................................................................................181282.0028281840917202042000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC...............................................................................231133.001332816309222518200100000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTCC..................................................................................201123.001231150700000010000000
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCC................................................................................211107.001078311810011101000000
.................................................................................................................................................................................TTAACTGTAAGACTGTGTCG................................................................................20193.0093854400000000000000
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTC.................................................................................22192.00926204013108121000000
...............................................................................................................................................................................TGTTAACTGTAAGACT......................................................................................16191.009100000011851849000000
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCG................................................................................23172.0072593900001000000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCCA...............................................................................23156.00560222008319172100000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCAA...............................................................................23155.00550000003229191100000
................................................................................................................................................................................GTTAACTGTAAGACTGTGTC.................................................................................20154.005413201021311372000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGG..................................................................................20153.0053493100000000000000
.................................................................................................................................................................................TTAACTGTAAGACTGTGTC.................................................................................19148.0048382100041020000000
....................................................................................................................................................................................ACTGTAAGACTGTGTCT................................................................................17145.00450000003123027000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGC..................................................................................20140.0040362200000000000000
..................................................................................................................................................................................TAACTGTAAGACTGTGTCC................................................................................19139.0039380100000000000000
...................................................................................................................................................................................AACTGTAAGACTGTGTCC................................................................................18134.0034292200000001000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG...............................................................................23126.002650010042851000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT..............................................................................24124.0024530100122100000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTCG..................................................................................20123.0023182300000000000000
.........................................................................................................................................ACATAGTCGTACGGTGAATG........................................................................................................................20122.0022600021400000000000
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGT..................................................................................21121.002160200025240000000
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCTT...............................................................................22120.0020510100010111000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTAC................................................................................22119.0019162000000001000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTT.................................................................................21119.0019100000051111000000
.........................................................................................................................................ACATAGTCGTACGGTGAATGTTG.....................................................................................................................23118.001800001325212200000
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCG................................................................................21118.0018121500000000000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCAAA..............................................................................24116.001600000041920000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCCT...............................................................................23116.001638000021200000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTGG................................................................................22115.0015130200000000000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGG....................................................................................18115.0015132000000000000000
.........................................................................................................................................ACATAGTCGTACGGTGAATGT.......................................................................................................................21115.001550201510001000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGC....................................................................................18114.0014140000000000000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAT..............................................................................24114.001410100011370000000
.....................................................................................................................................................................................CTGTAAGACTGTGTCT................................................................................16113.001300000017212000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAC..............................................................................24113.001350100021211000000
.........................................................................................................................................ACATAGTCGTACGGTGAAT.........................................................................................................................19112.001230001601000000100
......................................................................................................................................................................................TGTAAGACTGTGTCT................................................................................15111.001100000000029000000
...................................................................................................................................................................................AACTGTAAGACTGTGTCTA...............................................................................19110.0010000000000010000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTAA.............................................................................25110.001000000021610000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTTCT.................................................................................2129.501930000024621010000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTTC................................................................................2219.00990000000000000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTGC................................................................................2219.00990000000000000000
..................................................................................................................................................................................TAACTGTAAGACTGTGTCG................................................................................1919.00970200000000000000
.........................................................................................................................................ACATAGTCGTACGGTGAA..........................................................................................................................1819.00950000300001000000
droSec2
CCGCCGCCGCC------------------------GCCGCCACTGTAGTCGATG-------------------AACGGAGAA----------------------------GAAAGGATG--CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCCAGCCACA---------------------------------------------------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCT................................................................................221105273.001052731300212625914770499
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCT................................................................................2111750.001750123017651293
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTC.................................................................................2111578.001578123183861186
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT...............................................................................2311478.001478812591031035
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT................................................................................2311328.00132857164115992
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGT..................................................................................2011006.0010062311726840
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA...............................................................................231687.006872617042449
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCC................................................................................221412.00412678236227
.................................................................................................................................................................................TTAACTGTAAGACTGTGTCT................................................................................201180.0018090131166
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCA................................................................................221104.001041112279
.........................................................................................................................................ACATAGTCATACGGTGAATGTT......................................................................................................................22166.0066814017
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT..............................................................................24158.0058517333
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGT..................................................................................21140.004005134
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA..............................................................................24138.00380101117
.........................................................................................................................................ACATAGTCATACGGTGAATGTTG.....................................................................................................................23134.0034331117
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC...............................................................................23131.003176513
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTC.................................................................................22130.003016122
.........................................................................................................................................ACATAGTCATACGGTGAATGT.......................................................................................................................21127.002705220
...............................................................................................................................................................................TGTTAACTGTAAGACTGTG...................................................................................19125.002541020
................................................................................................................................................................................GTTAACTGTAAGACTGTGTC.................................................................................20124.002416422
..................................................................................................................................................................................TAACTGTAAGACTGTGTCT................................................................................19123.002314216
...................................................................................................................................................................................AACTGTAAGACTGTGTCT................................................................................18116.00163247
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCG................................................................................22114.001440010
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCC................................................................................21112.00128400
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG...............................................................................2318.0082105
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCTA...............................................................................2218.0084112
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCTT...............................................................................2217.0072104
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCG................................................................................2117.0077000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCCA...............................................................................2316.0061311
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTT.................................................................................2116.0061005
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCT..............................................................................2416.0060105
................................................................................................................................................................................GTTAACTGTAAGACTGTGT..................................................................................1915.0053101
.................................................................................................................................................................................TTAACTGTAAGACTGTGTC.................................................................................1915.0053002
...............................................................................................................................................................................TGTTAACTGTAAGACTGT....................................................................................1815.0051004
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAAA.............................................................................2514.0040031
...............................................................................................................................................................................TGTTAACTGTAAGACTGTC...................................................................................1914.0040013
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCA..............................................................................2413.0030012
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTTCT...............................................................................2323.0064002
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGA..................................................................................2013.0030003
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCA................................................................................2312.0020002
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAT..............................................................................2412.0020200
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCTA...............................................................................2412.0020110
...............................................................................................................................................................................TGTTAACTGTAAGACTGTCC..................................................................................2012.0021001
....................................................................................................................ATG--CCGCTCAATTACCCCG............................................................................................................................................1912.0020002
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCAA...............................................................................2312.0020101
droYak3
CCGCTGA------------------------------------------------------------------AATCGAGAA----------------------------GAAAGGATG--CCGCTCAATTACCCCGACATAGTCATACGGTGAATGTTGTGTATTGGAGACCAATGTTAACTGTAAGACTGTGTCTCGGTGGTTGCCAGCCACAC--CAG--CCACAT---------------CAGCCACATCGGCCACAA-----------ACCASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCT................................................................................221181089.001810891010937958317571600942421832739802160
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCC................................................................................22124376.00243761442028985751535160000
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCT................................................................................2312821.00282120763918515113323700000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTC.................................................................................2112746.0027461554446254110328800100
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCG................................................................................2212439.002439239127514920000
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCT................................................................................2111160.0011602057794891261460000
.................................................................................................................................................................................TTAACTGTAAGACTGTGTCT................................................................................2011011.0010119393814224120000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTT...............................................................................231793.00793186573736932761080000
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCC................................................................................231362.0036229606600000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGT..................................................................................201287.002872831264162270000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTA...............................................................................231252.0025277245243259310000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTC...............................................................................231158.00158355699132430000
.................................................................................................................................................................................TTAACTGTAAGACTGTGTCC................................................................................201144.001441400400000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCA................................................................................221111.00111222326172750000
..................................................................................................................................................................................TAACTGTAAGACTGTGTCT................................................................................19180.008057101000210000
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTC.................................................................................22153.0053411202610000
.........................................................................................................................................ACATAGTCATACGGTGAATGTT......................................................................................................................22153.00530222261440120
...............................................................................................................................................................................TGTTAACTGTAAGACTGTCC..................................................................................20152.00523401800000000
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGTCG................................................................................23149.0049470200000000
...................................................................................................................................................................................AACTGTAAGACTGTGTCT................................................................................18145.0045352204200000
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCC................................................................................21137.00372331100000000
.................................................................................................................................................................................TTAACTGTAAGACTGTGTCG................................................................................20130.0030300000000000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTTT..............................................................................24125.002512223870000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTAA..............................................................................24121.002102292420000
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCTC...............................................................................22121.0021112610100000
.........................................................................................................................................ACATAGTCATACGGTGAATGTTG.....................................................................................................................23119.001903123550000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTG...............................................................................23118.001813006800000
..............................................................................................................................................................................ATGTTAACTGTAAGACTGTGT..................................................................................21116.0016000041020000
................................................................................................................................................................................GTTAACTGTAAGACTGTGTCTT...............................................................................22116.001636021130000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTG...................................................................................19112.001221001800000
.........................................................................................................................................ACATAGTCATACGGTGAATGT.......................................................................................................................21111.001110013600000
...............................................................................................................................................................................TGTTAACTGTAAGACTGT....................................................................................18111.001160003200000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGTCTCT..............................................................................24110.001050102200000
...............................................................................................................................................................................TGTTAACTGTAAGACTGTGG..................................................................................2018.00880000000000

Generated: 10/20/2015 at 07:36 PM