ID:

dgr-mir-79

 Coordinate:

scaffold_14978:831100-831175 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intron

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-40.6 -40.4 -40.2

Flybase annnotation

intron [Dgri\GH25199-in]; utr5 [utr5_plus_2210]; pre_miRNA [Dgri\mir-79-RM]; miRNA [Dgri\miR-79-RA]

No Repeatable elements found

Sense Strand Reads

TTTGTGTTACATCTATACGGTTATTTAAAGTGCTTCTTCTTGGTGCCACATTGCCGTCGCTTTGGCGCTTTAGCTGTATGATAGATTTGAATACTTCATAAAGCTAGATTACCAAAGCATCGGCGCCTGTGGCCAGCTTAACAAACGTTTTCATGAAATTGATATATATATATATA

*******************************************.((((((.(((((..(((((((...(((((((.(((((..............))))).)))))))...)))))))..)))))..))))))..***************************************** 		Read size # Mismatch Hit Count Total Norm Total M041

female body

 V109

male body
..................................................................................................TAAAGCTAGATTACCAAAGCAT........................................................ 22 0 1 3023.00 3023 1687 1336
.................................................................................................ATAAAGCTAGATTACCAAAGCAT........................................................ 23 0 1 1738.00 1738 1097 641
..................................................................................................TAAAGCTAGATTACCAAAGCA......................................................... 21 0 1 235.00 235 222 13
.................................................................................................ATAAAGCTAGATTACCAAAGCA......................................................... 22 0 1 200.00 200 185 15
.................................................................................................ATAAAGCTAGATTACCAAAGC.......................................................... 21 0 1 120.00 120 111 9
..................................................................................................TAAAGCTAGATTACCAAAGC.......................................................... 20 0 1 99.00 99 92 7
...................................................................................................AAAGCTAGATTACCAAAGCAT........................................................ 21 0 1 67.00 67 62 5
.................................................................................................ATAAAGCTAGATTACCAAAG........................................................... 20 0 1 39.00 39 35 4
..................................................................................................TAAAGCTAGATTACCAACGCAT........................................................ 22 1 1 22.00 22 0 22
..................................................................................................TAAAGCTAGATTACCAAAGCATT....................................................... 23 1 1 20.00 20 19 1
..................................................................................................TAAAGCTAGATTACCAAAG........................................................... 19 0 1 16.00 16 15 1
.................................................................................................ATAAAGCTAGATTACCAAAGCATT....................................................... 24 1 1 15.00 15 14 1
..........................................................GCTTTGGCGCTTTAGCTGTATG................................................................................................ 22 0 1 14.00 14 7 7
.................................................................................................ATAAAGCTAGATTACCACAGCAT........................................................ 23 1 1 14.00 14 0 14
...................................................................................................AAAGCTAGATTACCAAAGCATT....................................................... 22 1 1 12.00 12 11 1
..........................................................GCTTTGGCGCTTTAGCTGTATGA............................................................................................... 23 0 1 12.00 12 10 2
..................................................................................................TAAAGCTAGATTACCAATGCAT........................................................ 22 1 1 9.00 9 1 8
..................................................................................................TAAAGCTGGATTACCAAAGCAT........................................................ 22 1 1 8.00 8 3 5
.................................................................................................ATAAAGCTAGATTACCAAAGCAC........................................................ 23 1 1 8.00 8 2 6
..................................................................................................TAAAGCCAGATTACCAAAGCAT........................................................ 22 1 1 6.00 6 0 6
..................................................................................................TACAGCTAGATTACCAAAGCAT........................................................ 22 1 1 6.00 6 0 6
..................................................................................................TAAAGCTAGATTACCAAAGCATG....................................................... 23 1 1 6.00 6 6 0
.................................................................................................ATAAAGCTAGATTACCAAAGCAG........................................................ 23 1 1 5.00 5 0 5
..................................................................................................TAAAGCTAGATTACCAAGGCAT........................................................ 22 1 1 5.00 5 1 4
..................................................................................................TAAAGCTACATTACCAAAGCAT........................................................ 22 1 1 5.00 5 0 5
....................................................................................................AAGCTAGATTACCAAAGCAT........................................................ 20 0 1 5.00 5 5 0
...................................................................................................AAAGCTAGATTACCAAAGCA......................................................... 20 0 1 4.00 4 4 0
...................................................................................................AAAGCTAGATTACCAAAGC.......................................................... 19 0 1 4.00 4 4 0
..................................................................................................TAGAGCTAGATTACCAAAGCAT........................................................ 22 1 1 4.00 4 1 3
.................................................................................................CTAAAGCTAGATTACCAAAGCAT........................................................ 23 1 1 4.00 4 2 2
..................................................................................................TAAAGCTAGATTACCAAA............................................................ 18 0 1 4.00 4 4 0
..................................................................................................TAAAGCTAGATTACCAAAGCAC........................................................ 22 1 1 4.00 4 2 2
.................................................................................................ATAAAGCTAGATTACCAAA............................................................ 19 0 1 4.00 4 4 0
..................................................................................................TAAAGATAGATTACCAAAGCAT........................................................ 22 1 1 4.00 4 0 4
.................................................................................................ATAAAGCTAGATTACCAAAGCAA........................................................ 23 1 1 4.00 4 0 4
..................................................................................................TAAAGCTAGATTACCAAAGCATA....................................................... 23 1 1 3.00 3 3 0
.................................................................................................ATAAAGCTGGATTACCAAAGCAT........................................................ 23 1 1 3.00 3 1 2
..................................................................................................TAAAGCTAGATTACCAAAGCATC....................................................... 23 0 1 3.00 3 3 0
..................................................................................................TAAAGCGAGATTACCAAAGCAT........................................................ 22 1 1 3.00 3 0 3
.................................................................................................ATAACGCTAGATTACCAAAGCAT........................................................ 23 1 1 3.00 3 0 3
.................................................................................................ATAAAGCTAGATTACCATAGCAT........................................................ 23 1 1 3.00 3 0 3
................................................................................................AATAAAGCTAGATTACCAAAGCAT........................................................ 24 1 1 3.00 3 3 0
.................................................................................................ATAAAGCTAGATTACCAAAGCATGG...................................................... 25 1 1 3.00 3 3 0
.................................................................................................TTAAAGCTAGATTACCAAAGCAT........................................................ 23 1 1 3.00 3 3 0
.................................................................................................ATAAATCTAGATTACCAAAGCAT........................................................ 23 1 1 3.00 3 1 2
..................................................................................................TAAAGCTAGATTACCAAAGCATGG...................................................... 24 1 1 3.00 3 3 0
..................................................................................................TAAAGGTAGATTACCAAAGCAT........................................................ 22 1 1 3.00 3 0 3
..................................................................................................TAAAGCTAGATTACCAAAGCATTG...................................................... 24 1 1 3.00 3 3 0
.................................................................................................ATAAAGATAGATTACCAAAGCAT........................................................ 23 1 1 3.00 3 0 3
..................................................................................................TAAACCTAGATTACCAAAGCAT........................................................ 22 1 1 3.00 3 0 3
................................................................................................CATAAAGCTAGATTACCAAAGCAT........................................................ 24 0 1 2.00 2 2 0
..................................................................................................TAAAGCTAGATCACCAAAGCAT........................................................ 22 1 1 2.00 2 0 2
..................................................................................................TAACGCTAGATTACCAAAGCAT........................................................ 22 1 1 2.00 2 0 2
..................................................................................................AAAAGCTAGATTACCAAAGCAT........................................................ 22 1 1 2.00 2 0 2
.................................................................................................ATAAAGCTAGATTACCAGAGCAT........................................................ 23 1 1 2.00 2 0 2
..................................................................................................TAAAGCTAGATTAACAAAGCAT........................................................ 22 1 1 2.00 2 0 2
.................................................................................................ATAAAGCTAGATTAGCAAAGCAT........................................................ 23 1 1 2.00 2 0 2
..................................................................................................TATAGCTAGATTACCAAAGCAT........................................................ 22 1 1 2.00 2 0 2
............................................................TTTGGCGCTTTAGCTGTATGA............................................................................................... 21 0 1 2.00 2 2 0
..................................................................................................TAAATCTAGATTACCAAAGCAT........................................................ 22 1 1 2.00 2 1 1
.................................................................................................ATAAAGCTAGATTACCAAACCAT........................................................ 23 1 1 2.00 2 2 0
.................................................................................................ATAAACCTAGATTACCAAAGCAT........................................................ 23 1 1 2.00 2 0 2
.................................................................................................ATAAAGCTAGATTACCAAAGCATA....................................................... 24 1 1 2.00 2 2 0
..................................................................................................TAAAGCTAGATTACCAAAGCATCC...................................................... 24 1 1 2.00 2 1 1
...................................................................................................AAAGCTAGATTACCAAAGCATG....................................................... 22 1 1 2.00 2 2 0
..................................................................................................TAAAGCTAGATTATCAAAGCAT........................................................ 22 1 1 2.00 2 0 2
.................................................................................................ATAAAGCTAGATTACCAAAGCT......................................................... 22 1 1 2.00 2 1 1
..................................................................................................TAAAGCTAGATTACCAAAGAAT........................................................ 22 1 1 2.00 2 1 1
..................................................................................................TAAAGCTAGATTCCCAAAGCAT........................................................ 22 1 1 2.00 2 0 2
..................................................................................................TAAAGCTAGATTACCCAAGCAT........................................................ 22 1 1 2.00 2 0 2
.................................................................................................ATAAAGCTAGATTACCAAAGAAT........................................................ 23 1 1 2.00 2 0 2
..............................................................................................CGCATAAAGCTAGATTACCAAAGCAT........................................................ 26 2 1 1.00 1 1 0
..................................................................................................TAAAGCTAGATTACCAAAGCATCCG..................................................... 25 1 1 1.00 1 1 0
..................................................................................................TAAAGCTAGATTACCAAAGCATCGCCA................................................... 27 2 1 1.00 1 1 0
..........................................................GCCTTGGCGCTTTAGCTGTATG................................................................................................ 22 1 1 1.00 1 1 0
.................................................................................................ATAAAGCTACATTCCCAAACCAT........................................................ 23 3 1 1.00 1 0 1
.................................................................................................ATAAAGCTAGAATACCAAAGCA......................................................... 22 1 1 1.00 1 1 0
..................................................................................................TAAAGCTAGATTACCAAAGCT......................................................... 21 1 1 1.00 1 1 0
.................................................................................................ATAAAGCTAGATTACCAAAGCATG....................................................... 24 1 1 1.00 1 1 0
..................................................................................................TAAAGCTAAATTACCAAAGCAT........................................................ 22 1 1 1.00 1 0 1
.................................................................................................TTAAAGCTAGATTACCAAAGCA......................................................... 22 1 1 1.00 1 1 0
..................................................................................................TAAAGCTAGATTACCAAAGCATGGCA.................................................... 26 3 1 1.00 1 1 0
.................................................................................................ATAAAGCTTGATTACCAAAGCAT........................................................ 23 1 1 1.00 1 0 1
................................................................................................TATAAAGCTAGATTACCAAAGC.......................................................... 22 1 1 1.00 1 1 0
...................................................................................................AAAGCTAGATTACCAAAGCATA....................................................... 22 1 1 1.00 1 1 0
..........................................................GCTTTGGCGCTTTAGCTGTAT................................................................................................. 21 0 1 1.00 1 1 0
..................................................................................................TAAATCTAGATTACCAAAGCA......................................................... 21 1 1 1.00 1 0 1
..................................................................................................TAAAGCTATATTACCAAAGCAT........................................................ 22 1 1 1.00 1 0 1
..................................................................................................TAAAGCTAGATTACCAAAGCATTC...................................................... 24 2 1 1.00 1 1 0
.................................................................................................ACAAAGCTAGATTACCAAAGCAT........................................................ 23 1 1 1.00 1 0 1
...............................................................................................GCATAAAGCTAGATTACCAAAGC.......................................................... 23 1 1 1.00 1 1 0
..................................................................................................TAAGGCTAGATTACCAAAGCAT........................................................ 22 1 1 1.00 1 0 1
..................................................................................................TAAAGCTAGACTACCAAAG........................................................... 19 1 1 1.00 1 1 0
..................................................................................................TAAAGCTAGATTACCAAAGCATCTTTG................................................... 27 3 1 1.00 1 1 0
.................................................................................................GTAAAGCTAGATTACCAAAGC.......................................................... 21 1 1 1.00 1 1 0
...............................................................................................CCATAAAGCTAGATTACCAAAGCAT........................................................ 25 1 1 1.00 1 1 0
..................................................................................................TAAAGCTAGGTTACCAAAGCAT........................................................ 22 1 1 1.00 1 0 1
................................................................................................CTTAAAGCTAGATTACCAAAGCAT........................................................ 24 1 1 1.00 1 1 0
...................................................................................................AAAGCTAGATTACCAAATCATG....................................................... 22 2 1 1.00 1 1 0
.................................................................................................ATAAAACTAGATTACCAAAGCAT........................................................ 23 1 1 1.00 1 0 1
..................................................................................................TAAAGCTAGATTACAAAAGCAT........................................................ 22 1 1 1.00 1 1 0
...........................................................CTTTGGCGCTTTAGCTGTATGA............................................................................................... 22 0 1 1.00 1 1 0
.................................................................................................ATAAAGCTAGATTACCAAAGCATGGTT.................................................... 27 3 1 1.00 1 1 0
.................................................................................................ATAAAGCTAGAATACCAAAGCAT........................................................ 23 1 1 1.00 1 0 1
..................................................................................................TAAAGCTAGATTACCAAAGCG......................................................... 21 1 1 1.00 1 1 0
.................................................................................................ATAAAGCTAGATTACCAAGT........................................................... 20 2 1 1.00 1 1 0
..................................................................................................TAAAACTACATTACCAAAGCAT........................................................ 22 2 1 1.00 1 1 0
.................................................................................................ATAAAGCTAGATTACCAAATCA......................................................... 22 1 1 1.00 1 1 0
..................................................................................................TAAAGCTAGATTACCAAAGCAA........................................................ 22 1 1 1.00 1 1 0
..................................................................................................TAAAGCTAGATTACCAAAGCATCCA..................................................... 25 2 1 1.00 1 1 0
.................................................................................................ATAAATCTAGATTACCAAAGCA......................................................... 22 1 1 1.00 1 0 1
.................................................................................................ATAAAGCTAGATTACCAAAGTAT........................................................ 23 1 1 1.00 1 1 0
.................................................................................................ATAAAGCTAGATTACCAAAACAT........................................................ 23 1 1 1.00 1 0 1
.................................................................................................ATAAAGTTAGATTACCAAAGCAT........................................................ 23 1 1 1.00 1 0 1
..................................................................................................TAAAGCTAGCTTACCAAACCAT........................................................ 22 2 1 1.00 1 0 1
..................................................................................................TAAAGCTAGATTACCAAAGCTA........................................................ 22 2 1 1.00 1 1 0
..................................................................................................TAAAGCTAGATTACCAAATCAT........................................................ 22 1 1 1.00 1 1 0
.................................................................................................ATCAAGCTAGATTACCAAAGCAT........................................................ 23 1 1 1.00 1 0 1
...............................................................................................AATTAAAGCTAGATTACCAAAGCAT........................................................ 25 3 1 1.00 1 1 0
..................................................................................................TAAAGCTAGATTACCAAAACAT........................................................ 22 1 1 1.00 1 0 1
...............................................................................................AGATAAAGCTAGATTACCAAAGCAT........................................................ 25 2 1 1.00 1 1 0
..................................................................................................CAAAGCTAGATTACCAAAGCAT........................................................ 22 1 1 1.00 1 0 1
..................................................................................................TAAAGCTAGATTACCAAAGCATGGAA.................................................... 26 3 1 1.00 1 1 0
..................................................................................................TAAAGCTAGATTACCAGAGCAT........................................................ 22 1 1 1.00 1 0 1
..................................................................................................TAAAGCTAGATTACCAAAGCATGC...................................................... 24 2 1 1.00 1 1 0
..................................................................................................TAAAGTTAGATTACCAAAGCAT........................................................ 22 1 1 1.00 1 0 1
..........................................................GCATTGGCGCTTTAGCTGTATG................................................................................................ 22 1 1 1.00 1 0 1
..................................................................................................TAAAGCTAGATTACCAAAGTAT........................................................ 22 1 1 1.00 1 0 1
..............................................................................................ATCATAAAGCTAGATTACCAAAGCAT........................................................ 26 1 1 1.00 1 0 1
.................................................................................................ATAAAGCTAGATTACCTAAGCAT........................................................ 23 1 1 1.00 1 1 0
..................................................................................................TAAAGCTAGATTACCAAAGCC......................................................... 21 1 1 1.00 1 1 0
.................................................................................................ATAAAGCTAGATTACCAAGGCAT........................................................ 23 1 1 1.00 1 1 0
..................................................................................................TAAAGCTAGATTACCAAAA........................................................... 19 1 1 1.00 1 1 0
..................................................................................................TATAGCTAGCTTACCAAAGCAT........................................................ 22 2 1 1.00 1 0 1
.................................................................................................ATAAAGCTCGATTACCAAAGCAT........................................................ 23 1 1 1.00 1 0 1
......................................................................................................GCTAGATTACCAAAGCAT........................................................ 18 0 1 1.00 1 1 0
.....................................................................................................AGCTAGATTACCAAAGCAT........................................................ 19 0 1 1.00 1 1 0
.................................................................................................ATAAAGCTAGATTACCAAAGCATGTT..................................................... 26 3 1 1.00 1 1 0
..................................................................................................TAAAGCTAGATTACCAAAGCATCG...................................................... 24 0 1 1.00 1 1 0
.................................................................................................ATCACGCTAGATTACCAAAGCAT........................................................ 23 2 1 1.00 1 0 1
...................................................................................................AACGCTAGATTACCAAAGCAT........................................................ 21 1 1 1.00 1 0 1
.................................................................................................GTAAAGCTAGATTACCAAAGCAT........................................................ 23 1 1 1.00 1 0 1
..................................................................................................TAAAGCTAGATTACCAAACCAT........................................................ 22 1 1 1.00 1 0 1
..................................................................................................ATAAACTAGATTACCAAAGCAT........................................................ 22 3 1 1.00 1 0 1
..................................................................................................TAAAGCTAGATTACCAAAC........................................................... 19 1 1 1.00 1 0 1
..........................................................GCTTTGGCGCTTTAGCTGTATGAT.............................................................................................. 24 0 1 1.00 1 1 0
..............................................................................................TTTATAAAGCTAGATTACCAAAGCAT........................................................ 26 1 1 1.00 1 1 0
.................................................................................................ATAAAGCTGGATTACCAAAGC.......................................................... 21 1 1 1.00 1 1 0
.................................................................................................ATACAGCTAGATTACCAAAGCAT........................................................ 23 1 1 1.00 1 0 1
.......................................................GTCCCTTTGGCGCGTGAGCTG.................................................................................................... 21 3 2 0.50 1 1 0
.................................................................................................ATAAAGCTAGATTACCAAACAT......................................................... 22 3 3 0.33 1 0 1
..............................................................TGGCGCTTAAGTTGTATG................................................................................................ 18 2 20 0.15 3 2 1
..................................................................................................TAAAGCTAGATTACCAAACAT......................................................... 21 3 12 0.08 1 0 1

Anti-sense strand reads

AAACACAATGTAGATATGCCAATAAATTTCACGAAGAAGAACCACGGTGTAACGGCAGCGAAACCGCGAAATCGACATACTATCTAAACTTATGAAGTATTTCGATCTAATGGTTTCGTAGCCGCGGACACCGGTCGAATTGTTTGCAAAAGTACTTTAACTATATATATATATAT

*****************************************.((((((.(((((..(((((((...(((((((.(((((..............))))).)))))))...)))))))..)))))..))))))..******************************************* 		Read size # Mismatch Hit Count Total Norm Total V109

male body		 M041

female body
..............................................................................................AAGTATTTCGATCTATTGGTTTCT.......................................................... 24 2 2 1.00 2 2 0
.................................................................................................TATTTCGATCTATTGGTTTC........................................................... 20 1 2 0.50 1 0 1
................................................................................................GTATTTCGATCTACTGGTTTCT.......................................................... 22 2 2 0.50 1 1 0
.................................................................................................TATTTCGATCTATTGGTTTT........................................................... 20 2 5 0.20 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droGri2 scaffold_14978:831050-831225 + dgr-mir-79 Known_mirbase TTTGTGTTACA----------------------TC-------TATACG-GTTATTTAA--------AG-------------------TGCTTCTT---CTTGGTGCCACATTGCCGTCGCTTTGGCGCTTTAGCTGTATGATAGATTTGAA-TACTTCATAAAGCTAGATTACCAAAGCATCGGCG-CCTGTGGCCAGCTTAAC----A-----AA---------------CGTTTTCATGAAAT----TGATAT---ATAT--ATATATA
droVir3 scaffold_12963:12863007-12863156 - dvi-mir-79 Known_mirbase GTGTAATAGCC-------------------------------------AG-GAT-TAG----------------------------------------ATGAACGCCGCACTGCCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTGAA-TACTTCATAAAGCTAGATTACCAAAGCATTGGCT-C-TGTGGCCAGCT----TAGCAA---A-------------GTTG--------TGAAACGATTTA---C---AT-----AATTTA
droMoj3 scaffold_6500:7202087-7202261 + dmo-mir-79 Known_mirbase ATACAAGTGCA-------------------------------------AGTGTCTTGTAATGTAAACG-------------------TGTTTTTAA--ATATTCGCCCCATTGCCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAA-TACTTCATAAAGCTAGATTACCAAAGCATTGGCT-C-TGTGG-----CCAAACCCCAGCGAA-------------CTTG--------TGAAATA-A-TCGAAC---ATG----CATGTA
droWil2 scf2_1100000004945:873524-873687 - dwi-mir-79-2 ATAGTGACATA----------------------TT-------ATTATA-GT-----AA----------------------------------------TGGATAATGGTCTTGCCTATGCTTTGGCGCTTTAGCTGTATGATAGATTTG-ACTACTTCATAAAGCTAGATTACCAAAGCATGGGCT-CTGGCTGA---CTTAATCAACTC---AAG---------------TGTTTTCTCGAAAA----AGTGGC---AAAT--TTAAATT
dp5 4_group3:8443940-8444111 + dps-mir-79 Known_mirbase AATAA--------------------AAG-----TGTTTTATCGA---AAGTGTTTAAA----------AGTACAACAATCT--AATCTGTGCTTAA----G--CCCTGCTCTGCTTCTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAAATACTTCATAAAGCTAGATTACCAAAGCATTGGCT-C-TGTGGA----AACTTCATCCA---A-------------ACAA--------TGAAAT-----------------------CCG
droPer2 scaffold_1:9895060-9895230 + dpe-mir-79 Known_mirbase TTTAGAGT--------------------------GTTATATCGA---AAGTGTTTAAA----------AGTACGACAATCT--AATCTGTGCTTAA----G--CCCTGCTCTGCTTCTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAAATACTTCATAAAGCTAGATTACCAAAGCATTGGCT-C-TGTGGA----AACTTCATCCA---A-------------ACAA--------TGAAAT-----------------------CCG
droAna3 scaffold_12916:15864681-15864843 - dan-mir-79 Known_mirbase ATTGTTT-----------------------------------AAAATATATGGTATAT--------AG-------------------TGTTC--------TATAGCTGCTTAACCGATGCTTTGGCGCTTTAGCTGTATGATAGATTTAAA-TACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TCCGCAGG----CCTGTCTTCAA---GG--------------AATAAA--------ATA-A-TAATTC---ATTT--ATATCCT
droBip1 scf7180000396717:103424-103553 - AATAT-----------------------------------------------------------------------------------------------AGTATCTGTTCTACCTGTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAA-TACTTCATAAAGCTAGATTACCAAAGCATGGGTT-TTCGCAGG----TTAATCTTCAT---TAA---------------ATAA------------T-ATACTC---A------TATATA
droKik1 scf7180000302382:529457-529624 + TACATCAAT-TAAATTATT------------AAAT-------TAAATTA-------------------------------------CTGTTTTT-T----G--GACTGCTCTTCTGACGCTTTGGCGCTTTAGCTGTATGATAGATTTTTACTACTTCATAAAGCTAGATTACCAAAGCATTGGCGGTCTGCAGG---GTAAATCATCAT---AAA-------------TACAAA------------A-TATAGA---A--T--TCGTAGA
droFic1 scf7180000454078:624162-624337 + AAAGTGTTAAA---------------------------------AATAAGTTGATTA---------------CAACAGGTTACAACCAGTGCTAAAAGAAATAACCTGCTTTGCCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TGTGCAGA----TTAACCATCAA---ATAGACCAC-CACCACA--------------------------------------ATG
droEle1 scf7180000490579:645371-645532 - CACAACCAA----------------------CATG-------TTAAAAAGTGTTTAAA---------------------------------------GAATGTGGCTGCTTGACCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TTTGCAGA----TCAATCATCCA---AAA---------------TAAG----TG----------AGATGTAT--T--TCTTTCA
droRho1 scf7180000768553:9505-9662 + CTATAATTGCA------ATAA----AAGCAATATG-------TGAACTAGTTTTTAAA---------------------------------------TAAAGTAGCTGCCTTGCCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TTTGCAGA----TCAATCATCAA---G-----------------------------------------------T--TTAACTA
droBia1 scf7180000301468:858147-858315 + TCTATGTT------------------------TTT-------G-------------AA----------------------------------------AAGGAAGCTGCCTTGCCGCTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TCTGCAGA----TCAATCATCAG---TTACAACTTGAAACGGAGTGATTACTTGATAT----TAATAT----TAT--AAATTAT
droTak1 scf7180000415914:422778-422917 + AATAAGT------------------------AAAT-------ATAAGAAGTGATTTAA------------------------------------------GGCAGCTGCTTTGCCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TTGGCAGA----TCAATCAACGA---ATA---------------TATC-----------------------------------T
droEug1 scf7180000408961:272466-272605 + TACA-----------------------------TA-------TCAACAAGTGATTAAA----------------------------------------AGAGAAACTGCTCTGCCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TTGGTAGA----TCAATCATCAA---AAA---------------TAAC----TG---------A-------------------A
dm3 chr2L:16698512-16698685 + dme-mir-79 Known_mirbase TCAGTGATATC-----AGTGAAATA------CATT-------GCAATGAGTGCCTTAG----------------------------------------AGTGAAGCTGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TCTGCAGG----TCAATCGTCAG---AAA---------------CAAT------------T-TAAGAT---ATGCTTGTTTATT
droSim2 2l:16265346-16265504 + dsi_275 confident TGAATTA------------------------CATT-------GAAATGAGTGCCTCAG----------------------------------------AGTGTAGCTGACTTACCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TGTGCAGA----TCAATCGTCGG---AAA---------------CAAA------------T-TAAGCC---ATGT--TTAGTTA
droSec2 scaffold_7:345536-345694 + dse-mir-79 Known_mirbase TGAATAA------------------------CATT-------GAAATGAGTGCCTCAG----------------------------------------AGTGTAGCTGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TGTGCAGA----TCAATCGTCAG---AAA---------------CAAA------------T-TAAGCC---ATGT--TTATTTA
droYak3 2R:4404392-4404531 - dya-mir-79 Known_mirbase ATAAGTGA------------------------ATT-------G-------------AG----------------------------------------AGTGTAGCTGCCTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTATACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TCTGCAGA----TCAATCATCAG---A-----------------CAAA------------T-TAGGCC---ATGC--T----TA
droEre2 scaffold_4845:19768174-19768329 + der-mir-79 Known_mirbase ATTGCA---------------------------TT-------GGAATAAGTGACTTAG----------------------------------------AGTGCAGCTGCCTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TCTGCAGA----TCAATCTTCAG---AAA---------------GAAA------------C-TAGGCC---CTGC--TTATTCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droGri2
TTTGTGTTACA----------------------TC-------TATACG-GTTATTTAA--------AG-------------------TGCTTCTT---CTTGGTGCCACATTGCCGTCGCTTTGGCGCTTTAGCTGTATGATAGATTTGAA-TACTTCATAAAGCTAGATTACCAAAGCATCGGCG-CCTGTGGCCAGCTTAAC----A-----AA---------------CGTTTTCATGAAAT----TGATAT---ATAT--ATATATASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAT..........................................................................................2213023.00302316871336
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAT..........................................................................................2311738.0017381097641
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCA...........................................................................................211235.0023522213
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCA...........................................................................................221200.0020018515
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGC............................................................................................211120.001201119
...............................................................................................................................................................TAAAGCTAGATTACCAAAGC............................................................................................20199.0099927
................................................................................................................................................................AAAGCTAGATTACCAAAGCAT..........................................................................................21167.0067625
..............................................................................................................................................................ATAAAGCTAGATTACCAAAG.............................................................................................20139.0039354
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATT.........................................................................................23120.0020191
...............................................................................................................................................................TAAAGCTAGATTACCAAAG.............................................................................................19116.0016151
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATT.........................................................................................24115.0015141
......................................................................................................................GCTTTGGCGCTTTAGCTGTATG...................................................................................................................................22114.001477
................................................................................................................................................................AAAGCTAGATTACCAAAGCATT.........................................................................................22112.0012111
......................................................................................................................GCTTTGGCGCTTTAGCTGTATGA..................................................................................................................................23112.0012102
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAC..........................................................................................2318.00826
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATG.........................................................................................2316.00660
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAG..........................................................................................2315.00505
.................................................................................................................................................................AAGCTAGATTACCAAAGCAT..........................................................................................2015.00550
................................................................................................................................................................AAAGCTAGATTACCAAAGCA...........................................................................................2014.00440
................................................................................................................................................................AAAGCTAGATTACCAAAGC............................................................................................1914.00440
...............................................................................................................................................................TAAAGCTAGATTACCAAA..............................................................................................1814.00440
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAC..........................................................................................2214.00422
..............................................................................................................................................................ATAAAGCTAGATTACCAAA..............................................................................................1914.00440
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAA..........................................................................................2314.00404
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATA.........................................................................................2313.00330
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATC.........................................................................................2313.00330
.............................................................................................................................................................CATAAAGCTAGATTACCAAAGCAT..........................................................................................2412.00220
........................................................................................................................TTTGGCGCTTTAGCTGTATGA..................................................................................................................................2112.00220
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATA.........................................................................................2412.00220
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATCC........................................................................................2412.00211
................................................................................................................................................................AAAGCTAGATTACCAAAGCATG.........................................................................................2212.00220
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCT...........................................................................................2212.00211
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCT...........................................................................................2111.00110
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATG.........................................................................................2411.00110
................................................................................................................................................................AAAGCTAGATTACCAAAGCATA.........................................................................................2211.00110
......................................................................................................................GCTTTGGCGCTTTAGCTGTAT....................................................................................................................................2111.00110
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATTC........................................................................................2411.00110
.......................................................................................................................CTTTGGCGCTTTAGCTGTATGA..................................................................................................................................2211.00110
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCG...........................................................................................2111.00110
..............................................................................................................................................................ATAAAGCTAGATTACCAAGT.............................................................................................2011.00110
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAA..........................................................................................2211.00110
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATCCA.......................................................................................2511.00110
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCTA..........................................................................................2211.00110
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATGC........................................................................................2411.00110
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCC...........................................................................................2111.00110
...............................................................................................................................................................TAAAGCTAGATTACCAAAA.............................................................................................1911.00110
...................................................................................................................................................................GCTAGATTACCAAAGCAT..........................................................................................1811.00110
..................................................................................................................................................................AGCTAGATTACCAAAGCAT..........................................................................................1911.00110
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATGTT.......................................................................................2611.00110
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATCG........................................................................................2411.00110
...............................................................................................................................................................TAAAGCTAGATTACCAAAC.............................................................................................1911.00101
......................................................................................................................GCTTTGGCGCTTTAGCTGTATGAT.................................................................................................................................2411.00110
..............................................................................................................................................................ATAAAGCTAGATTACCAAACAT...........................................................................................2230.33101
...............................................................................................................................................................TAAAGCTAGATTACCAAACAT...........................................................................................21120.08101
droVir3
GTGTAATAGCC-------------------------------------AG-GAT-TAG----------------------------------------ATGAACGCCGCACTGCCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTGAA-TACTTCATAAAGCTAGATTACCAAAGCATTGGCT-C-TGTGGCCAGCT----TAGCAA---A-------------GTTG--------TGAAACGATTTA---C---AT-----AATTTASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAT..........................................................................................221293890.0029389001489211710220486837147682134411455881415665956316259913302566325615867958460745201851983656197141611724395247699427213653813265219043108831221174291925412382010001101002001100032812752386231393025461541295527491731414840681930
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAT..........................................................................................231182171.0018217101398086870718318725400780535377120559529287314846591287173911564003264930501122468375236130091309763824702231073886639331756656949986659731300651990000201010010001013152110214523450601562114773234382922442423361113
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCA...........................................................................................2116534.00653400802984611424817426630215258120162691052241881491461352272265024351895031458017718816411714919000000000000000000004703805982510631120231000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCA...........................................................................................2215160.005160005831069143277660421085021646941549674971861533022215514061363891268015218115613182106000000000000000000034226019491615200101131101
................................................................................................................................................................AAAGCTAGATTACCAAAGCAT..........................................................................................2112034.0020340021713941945137204257301932341333633371403610596727033103562861558044846700000000000000000002171101382501000000000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGC............................................................................................2111737.0017371234470222341826339471715322687282430505111068554114586456558954122140001020000000010001053410172210891110711211101020
..............................................................................................................................................................ATAAAGCTAGATTACCAAAG.............................................................................................2011524.00152411221816442516241721516181181212611121238302472421039939146361742649031292900001000000000000004226011131213653355061104
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATT.........................................................................................2311504.001504001008697762321020281814211562323289760299812631302376421728614041902700000000000000000000890674913300001010000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGC............................................................................................2011490.0014901013242322611218841301369329335027135935312727453554432852316283243173427001110310101100011137219041612701384118861051
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAA..........................................................................................2311118.0011180012431414000005420001052317642686271717213730764513651451000000000000000000010302093231000000030011
................................................................................................................................................................AAAGCTAGATTACCAAAGCATT.........................................................................................221849.00849006942101700101002499166421117412627819120149172232338402531600000000000000000001410734100001000100020
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATA.........................................................................................231825.008250021184250030110610111103227232438615037156353135547835628160000000000000000000100036611100000000010
......................................................................................................................GCTTTGGCGCTTTAGCTGTATG...................................................................................................................................221646.006460027314761362914051321201121718191119331113719419171064910000000000000000000042132011633310002410100
......................................................................................................................GCTTTGGCGCTTTAGCTGTATGA..................................................................................................................................231619.0061900524727849020400143142011432731304757201151154464328600011203000000000004310383210110226000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAG.............................................................................................191555.0055523571931871720112212414127520162015522162623737111013512813100000000000000001000115610111151160110240011
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATT.........................................................................................241549.00549003341707002001182286281781416135844111473019421271120211200000000000000000002570422100020000200000
...................................................................................................................................................................GCTAGATTACCAAAGCAT..........................................................................................181453.0045300603719982130010264431105353116139661661622510439230000000000000000000000010200000000000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAA..........................................................................................221449.00449004513110000000310002117321325132912949161423832551719400000000000000000000110271611000000020000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAC..........................................................................................221370.00370012181635011310012303222234247716195931512769111120140000000000000000000261012320100000100000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATA.........................................................................................241361.00361009240301100001000001200715132217819715363214134201800000000000000000000200023022010000001001
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATC.........................................................................................231305.00305003463221100100011010113811143135171973201900016380000000000000000100001102100000000200001
..............................................................................................................................................................ATAAAGCTAGATTACCAAA..............................................................................................191276.00276002201411111100205343325742510612171441539104213177000000000000000000002109601000000000000
...................................................................................................TGAACGCCGCACTGCCGTT.........................................................................................................................................................191267.002673131100001100000010001000123413010022050000010000000000000000000000004137944404900000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATC.........................................................................................241233.00233001552124000000003000027006333417236391160110824000000000000000000010800000001000000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAC..........................................................................................231186.00186007415314000011002020152313939723316835561760000000000000000000020013101001000000011
..................................................................................................ATGAACGCCGCACTGCCGTT.........................................................................................................................................................201179.001790000000010101000000001000010201100111010000110112210000000000000101041361723181900001
.............................................................................................................................................................CATAAAGCTAGATTACCAAAGCAT..........................................................................................241173.0017300802030000000311121153113816233837112710121032000000000000000000000001200000000000000
.................................................................................................................................................................AAGCTAGATTACCAAAGCAT..........................................................................................201158.001580019174800000301211311112343102615816564550000000000000000000010025100000010000000
...............................................................................................................................................................TAAAGCTAGATTACCAAA..............................................................................................181156.00156000010210010100055100342284513101012398361176000000000000000000000005700000000010000
........................................................................................................................TTTGGCGCTTTAGCTGTATGA..................................................................................................................................211143.001430018042901000000011000007731111554500024044000000000000000000000001633420121431013
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATAA........................................................................................241124.0012400401010001000000000000212105210610082029923000000000000000000000006100000000000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAAA.........................................................................................241116.001160081000000000100000000018710112214079256720000000000000000000000012100000000000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATAAA.......................................................................................261102.00102001100000010000000000000971212001110218151000000000000000000000000007310000000000000
......................................................................................................................GCTTTGGCGCTTTAGCTGTAT....................................................................................................................................211100.001000021215001000011323021346353642932123223000000000000000000002003123000000010000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATAAA.......................................................................................25196.00960020000000010000000000005695020117161415420000000000000000000000004200000000000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATTA........................................................................................24188.008800301000000010000001001253131014803178940000000000000000000000009200000000000001
................................................................................................................................................................AAAGCTAGATTACCAAAGCA...........................................................................................20177.007700330000000000013213104001032214310001001000000000000000000003007000000000000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATAA........................................................................................25175.0075004000000000000000000000122101111103189500000000000000000000000009700000000000000
................................................................................................................................................................AAAGCTAGATTACCAAAGCATC.........................................................................................22171.007100124058000000000000050102221650803000016000000000000000000000000000000000000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAG..........................................................................................22169.006900007412100000111110070172001000202131142000000000000000000012002100000000000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATTT........................................................................................24151.00510020113000000030112002112282140021012300000000000000000000000004100000000000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAA.............................................................................................20150.005000151100000000010000000011000300401409123000000000000000000001100001000000000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATTAAA......................................................................................26149.00490000001000000000000000001262000080687100000000000000000000000005200000000000000
..................................................................................................................................................................AGCTAGATTACCAAAGCAT..........................................................................................19147.00470040112000001010100051032142031321051200000000000000000000000000000000000000000
......................................................................................................................GCTTTGGCGCTTTAGCTGTATGAA.................................................................................................................................24147.004700320000000000000000000000210010001110000000001000000000000000100137300000012124
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAG..........................................................................................23141.00410000212000101000000010074001100010001062000000000000000000010008100000000000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAAA.........................................................................................23137.003700300000000000000000000010500102101212321000000000000000000000002001000000000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGA............................................................................................21134.003400100001100300000000010011111100100014120000000000000000000002000001000000000000
........................................................................................................................TTTGGCGCTTTAGCTGTATGAA.................................................................................................................................22134.00340011000000000000000000002021000010020100000000000000000000000000015300200313122
................................................................................................................................................................AAAGCTAGATTACCAAAGCATTT........................................................................................23133.00330010100000000010000001003020102400231121000000000000000000000005200000000000000
................................................................................................................................................................AAAGCTAGATTACCAAAGCATA.........................................................................................22131.00310051100000000000200001122025010200001020000000000000000000000002100000000000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATTT........................................................................................25131.00310042001000000000000000011064100321310100000000000000000000000000000000000000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATG.........................................................................................23131.00310090121000000000010000021122120000002110000000000000000000000002000000000000000
........................................................................................................................TTTGGCGCTTTAGCTGTATG...................................................................................................................................20130.00300020153000100000000020001122002100010011000000000000000000000000020002000000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATTA........................................................................................25130.00300010100000000000000010020122020101264200000000000000000000000002000000000000000
................................................................................................................................................................AAAGCTAGATTACCAAAGCATTA........................................................................................23130.00300010000000000000000000000070002010821100000000000000000000000003400000000000000
..............................................................................................................................................................ATAAAGCTAGATTACCAA...............................................................................................18129.00290010101000000020001000320021222110002050000000000000000000000000000000000000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATTAA.......................................................................................25128.00280000000000000000000000004111000040167210000000000000000000000000000000000000000
......................................................................................................................GCTTTGGCGCTTTAGCTGTA.....................................................................................................................................20127.00270005405000000000000000010020000100001010000000000001000000011000000021010000000
......................................................................................................................GCTTTGGCGCTTTAGCTG.......................................................................................................................................18126.00260000104020400000000000010000000000000000000100000000000000000000000004206100000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCC...........................................................................................22125.00250060101000000000000020010000111401000024000000000000000000000000000000000000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAAA............................................................................................21220.504100200000000000000000000003000211000023050000000000000000000000000031000000000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATTAAA......................................................................................27120.00200010000000000000000000000021000010234300000000000000000000000003000000000000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAA.............................................................................................19119.00190030100000000002000000001001112200110011000000000000000000001000000000000000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATAT........................................................................................24119.00190000110000000000000110010120031200000122000000000000000000000000000000000000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCT...........................................................................................22119.00190043000000000001000103010000000100001010000000000001000000000000200000000000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATCC........................................................................................24119.00190030000000000000000010000000212201000007000000000000000000000000000000000000000
................................................................................................................................................................AAAGCTAGATTACCAAAGC............................................................................................19119.00190080000000000011000000000220100300000000000000000000000000001000000000000000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCC...........................................................................................21118.00180010102000000002011011010010220100000001000000000000000000000000000000000000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAAAA........................................................................................25118.00180000000000000000000000001050000020203120000000000000000000000000200000000000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATAT........................................................................................25117.00170000200000000000000000011212101110101110000000000000000000000000000000000000000
......................................................................................................................GCTTTGGCGCTTTAGCTGT......................................................................................................................................19117.00170010107000000010010000010000000000000030000000000000000000001000000010000000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCCC..........................................................................................22116.001600000010000000000010140000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................AAAGCTAGATTACCAAAGCATTAA.......................................................................................24116.00160020000000000000000000001001000020342010000000000000000000000000000000000000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATG.........................................................................................24115.00150030000000000000000000000021000400102000000000000000000000000000000000020000000
.............................................................................................................................................................CATAAAGCTAGATTACCAAAGCA...........................................................................................23114.00140010000000000000000000000002231110101001000000000000000000000000000000000000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATTG........................................................................................24113.00130030000000000000000000010021100100031000000000000000000000000000000000000000000
.........................................................G----------------------------------------ATGAACGCCGCACTGCCGTT.........................................................................................................................................................21113.00130000000000000000000000000000000000000000000000000000000000000000100032012400000
.................................................................................................................................................................AAGCTAGATTACCAAAGCATT.........................................................................................21112.00120040000000000000000000001020000000000000000000000000000000000005000000000000000
................................................................................................................................................................AAAGCTAGATTACCAAAGCATTAAA......................................................................................25112.00120030000000000100000000000120000000011000000000000000000000000003000000000000000
......................................................................................................................GCTTTGGCGCTTTAGCTGTATT...................................................................................................................................22112.00120000202000100000000100000001000000000000000000000000000000050000000000000000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGT............................................................................................21111.00110011000201000000000000001100010000001200000000000000000000000000000000000000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATTAA.......................................................................................26111.00110000000000000000000000001001000030111000000000000000000000000003000000000000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATCT........................................................................................24111.00110020010000000001000020010000000201000001000000000000000000000000000000000000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCT...........................................................................................21111.00110020000000000011101000110000000000000001000000000000000000001100000000000000000
............................................................................................................................................................TCATAAAGCTAGATTACCAAAGCAT..........................................................................................25111.00110000001000000000000000001011031010110000000000000000000000000000000000000000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATCA........................................................................................24110.00100010000000000000000000000001011101010200000000000000000000000100000000000000000
.......................................................TAG----------------------------------------ATGAACGCCGCACTGCCGTT.........................................................................................................................................................23110.00100000000000000000000000000000000000010000000000000000000000000000000033020100000
.......................................................................................................................CTTTGGCGCTTTAGCTGTATGA..................................................................................................................................22110.00100060000000000000000000000111000000000010000000000000000000000000000000000000000
........................................................AG----------------------------------------ATGAACGCCGCACTGCCGTT.........................................................................................................................................................2219.0090000000000000000000000000000000000000000000000000000000000000000000030032100000
................................................................................................................................................................AAAGCTAGATTACCAAAGCATG.........................................................................................2218.0080020000000000000000001000110010010000100000000000000000000000000000000000000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGA............................................................................................2018.0080030000001000001000000000000000001001010000000000000000000000000000000000000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATCT........................................................................................2518.0080010001000000000000000010000100102000100000000000000000000000000000000000000000
...................................................................................................TGAACGCCGCACTGCCGT..........................................................................................................................................................1817.0070000000000000000000000000000000000000000000000000000000000000000000003020200000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATTTA.......................................................................................2517.0070000000000000000000000000010000120120000000000000000000000000000000000000000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATCC........................................................................................2517.0070000000000000000000000000010010202000001000000000000000000000000000000000000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATCA........................................................................................2517.0070000000000000000000000000000100000041100000000000000000000000000000000000000000
droMoj3
ATACAAGTGCA-------------------------------------AGTGTCTTGTAATGTAAACG-------------------TGTTTTTAA--ATATTCGCCCCATTGCCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAA-TACTTCATAAAGCTAGATTACCAAAGCATTGGCT-C-TGTGG-----CCAAACCCCAGCGAA-------------CTTG--------TGAAATA-A-TCGAAC---ATG----CATGTASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAT..........................................................................................22119266.00192668086729977276142212492
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAT..........................................................................................23112976.00129765940398682204426071305
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCA...........................................................................................211816.0081653310317415117
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAC..........................................................................................221557.00557881044622
......................................................................................................................GCTTTGGCGCTTTAGCTGTATGA..................................................................................................................................231515.00515329434652
......................................................................................................................GCTTTGGCGCTTTAGCTGTATG...................................................................................................................................221495.004951511691432120
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCA...........................................................................................221485.0048532051748869
................................................................................................................................................................AAAGCTAGATTACCAAAGCAT..........................................................................................211441.00441277325516223
...............................................................................................................................................................TAAAGCTAGATTACCAAAGC............................................................................................201433.0043310914132825217
................................................................................................................................................................AAAGCTAGATTACCAAAGCATT.........................................................................................221407.0040715247182233
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATT.........................................................................................231399.00399149135521710
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAC..........................................................................................231249.00249290082111
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATC.........................................................................................231181.00181950166811
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGC............................................................................................211154.0015456014912
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATA.........................................................................................231151.0015178302671
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATT.........................................................................................241114.0011430124770
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATC.........................................................................................241107.00107540123911
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATA.........................................................................................24169.006928101381
...............................................................................................................................................................TAAAGCTAGATTACCAAAG.............................................................................................19167.00675004634
..............................................................................................................................................................ATAAAGCTAGATTACCAAAG.............................................................................................20161.006132021359
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAA..........................................................................................22157.005735102181
......................................................................................................................GCTTTGGCGCTTTAGCTGTA.....................................................................................................................................20149.00491300441
.............................................................................................................................................................CATAAAGCTAGATTACCAAAGCAT..........................................................................................24142.004211001300
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAA..........................................................................................23136.00362700081
......................................................................................................................GCTTTGGCGCTTTAGCTGTAT....................................................................................................................................21135.00353010301
................................................................................................................................................................AAAGCTAGATTACCAAAGCATC.........................................................................................22135.00359001250
................................................................................................................................................................AAAGCTAGATTACCAAAGCATA.........................................................................................22133.003318000150
.................................................................................................................................................................AAGCTAGATTACCAAAGCAT..........................................................................................20133.003317020131
................................................................................................................................................................AAAGCTAGATTACCAAAGCA...........................................................................................20119.00191501120
......................................................................................................................GCTTTGGCGCTTTAGCTGT......................................................................................................................................19115.00150120120
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATAA........................................................................................24113.00131100020
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATG.........................................................................................23112.0012800220
......................................................................................................................GCTTTGGCGCTTTAGCTGTATGAA.................................................................................................................................24112.00122000100
..............................................................................................................................................................ATAAAGCTAGATTACCAAA..............................................................................................19111.0011801200
...................................................................................................................................................................GCTAGATTACCAAAGCAT..........................................................................................18111.0011100091
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATAAA.......................................................................................26110.00101000000
........................................................................................................................TTTGGCGCTTTAGCTGTATGA..................................................................................................................................21110.0010400141
................................................................................................................................................................AAAGCTAGATTACCAAAGC............................................................................................19110.0010500050
.................................................................................................................................................................AAGCTAGATTACCAAAGCATT.........................................................................................2119.009401040
......................................................................................................................GCTTTGGCGCTTTAGCTG.......................................................................................................................................1819.009101070
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATAA........................................................................................2519.009800010
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATTT........................................................................................2418.008200051
...................................................................................................TATTCGCCCCATTGCCGTT.........................................................................................................................................................1918.008412010
................................................................................................................................................................AAAGCTAGATTACCAAAGCATG.........................................................................................2218.008700010
................................................................................................................................................................AAAGCTAGATTACCAAAGCATTT........................................................................................2317.007300040
..................................................................................................................................................................AGCTAGATTACCAAAGCAT..........................................................................................1917.007300040
...............................................................................................................................................................TAAAGCTAGATTACCAAAGT............................................................................................2017.007300004
......................................................................................................................GCTTTGGCGCTTTAGCTGTAC....................................................................................................................................2117.007000070
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATAAA.......................................................................................2526.50131300000
................................................................................................................................................................AAAGCTAGATTACCAAAGCAC..........................................................................................2116.006100050
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAG..........................................................................................2316.006210030
.......................................................................................................................CTTTGGCGCTTTAGCTGTATGA..................................................................................................................................2216.006400020
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAAA.........................................................................................2415.005500000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATG.........................................................................................2415.005500000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAG..........................................................................................2215.005012200
................................................................................................................................................................AAAGCTAGATTACCAAAGCATTA........................................................................................2315.005210020
..................................................................................................ATATTCGCCCCATTGCCGTT.........................................................................................................................................................2014.004020020
.............................................................................................................................................................CATAAAGCTAGATTACCAAAGCA...........................................................................................2314.004100030
.................................................................................................................................................................AAGCTAGATTACCAAAGCAC..........................................................................................2014.004000040
............................................................................................................................................................TCATAAAGCTAGATTACCAAAGCAT..........................................................................................2513.003000030
................................................................................................................................................................AAAGCTAGATTACCAAAGCATTC........................................................................................2313.003100011
......................................................................................................................GCTTTGGCGCTTTAGCTGTATGG..................................................................................................................................2313.003000030
..............................................................................................................................................................ATAAAGCTAGATTACCAA...............................................................................................1813.003100020
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATTAA.......................................................................................2513.003300000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAAA.........................................................................................2323.006400020
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATTT........................................................................................2513.003200010
......................................................................................................................GCTTTGGCGCTTTAGCTGTATT...................................................................................................................................2213.003012000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATTAAA......................................................................................2613.003300000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATCA........................................................................................2413.003300000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATTC........................................................................................2413.003200001
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATAT........................................................................................2513.003100020
........................................................................................................................TTTGGCGCTTTAGCTGTATG...................................................................................................................................2013.003011010
.........................................................................................................................TTGGCGCTTTAGCTGTATGA..................................................................................................................................2012.002100010
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCCC..........................................................................................2312.002000020
droWil2
ATAGTGACATA----------------------TT-------ATTATA-GT-----AA----------------------------------------TGGATAATGGTCTTGCCTATGCTTTGGCGCTTTAGCTGTATGATAGATTTG-ACTACTTCATAAAGCTAGATTACCAAAGCATGGGCT-CTGGCTGA---CTTAATCAACTC---AAG---------------TGTTTTCTCGAAAA----AGTGGC---AAAT--TTAAATTSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAT..........................................................................................2228632.501726513195678498294683
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAT..........................................................................................2325047.00100941594135146044183
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCA...........................................................................................222461.5092303588446111
......................................................................................................................GCTTTGGCGCTTTAGCTGTATG...................................................................................................................................222420.008403142575246
..............................................................................................................................................................ATAAAGCTAGATTACCAAAG.............................................................................................202416.508332824567178
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCA...........................................................................................212353.00706122813315149
...............................................................................................................................................................TAAAGCTAGATTACCAAAGC............................................................................................202197.0039427503169145
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGC............................................................................................212185.00370578124442
...............................................................................................................................................................TAAAGCTAGATTACCAAAG.............................................................................................192101.50203233254112
......................................................................................................................GCTTTGGCGCTTTAGCTGTATGA..................................................................................................................................23288.50177246110523
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAA..........................................................................................23281.001620691911
................................................................................................................................................................AAAGCTAGATTACCAAAGCAT..........................................................................................21271.0014204933951
................................................................................................................................................................AAAGCTAGATTACCAAAGCATT.........................................................................................22220.504101101911
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAC..........................................................................................22216.50330160116
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATT.........................................................................................23213.5027014193
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATA.........................................................................................23212.0024012093
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAA..........................................................................................22212.0024081141
..............................................................................................................................................................ATAAAGCTAGATTACCAAA..............................................................................................19211.5023050153
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATT.........................................................................................2429.501907075
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAAA.........................................................................................2429.0018070110
.......................................................................................................................CTTTGGCGCTTTAGCTGTATGA..................................................................................................................................2228.0016111040
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAC..........................................................................................2327.001407115
.................................................................................................................................................................AAGCTAGATTACCAAAGCAT..........................................................................................2026.501303136
.............................................................................................................................................................CATAAAGCTAGATTACCAAAGCAT..........................................................................................2425.501105123
........................................................................................................................TTTGGCGCTTTAGCTGTATGA..................................................................................................................................2125.001005050
......................................................................................................................GCTTTGGCGCTTTAGCTGT......................................................................................................................................1924.50910062
.......................................................................................................................CTTTGGCGCTTTAGCTGTATG...................................................................................................................................2124.50903051
......................................................................................................................GCTTTGGCGCTTTAGCTGTA.....................................................................................................................................2024.00831040
................................................................................................................................................................AAAGCTAGATTACCAAAGCA...........................................................................................2024.00804013
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATA.........................................................................................2424.00802150
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAAA.........................................................................................2323.50703040
......................................................................................................................GCTTTGGCGCTTTAGCTGTAT....................................................................................................................................2123.00601032
...........................................................................................................................................................TTCATAAAGCTAGATTACCAAA..............................................................................................2223.00600060
...........................................................................................................................................................TTCATAAAGCTAGATTACCA................................................................................................2023.00600024
..............................................................................................................................................................ATAAAGCTAGATTACCAAAT.............................................................................................2023.00600033
..................................................................................................................................................................AGCTAGATTACCAAAGCAT..........................................................................................1922.50501013
..............................................................................................................................................................ATAAAGCTAGATTACCAAACAT...........................................................................................2222.50500014
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCT...........................................................................................2222.50500050
...............................................................................................................................................................TAAAGCTAGATTACCAAA..............................................................................................1822.50501022
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGA............................................................................................2122.50500050
..............................................................................................................................................................ATAAAGCTAGATTACCAAAA.............................................................................................2022.50501031
........................................................................................................................TTTGGCGCTTTAGCTGTATG...................................................................................................................................2022.00400013
..............................................................................................................................................................ATAAAGCTAGATTACCAAAAA............................................................................................2122.00402110
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGT............................................................................................2122.00401021
......................................................................................................................GCTTTGGCGCTTTAGCTG.......................................................................................................................................1822.00431000
......................................................................................................................GCTTTGGCGCTTTAGCTGTATT...................................................................................................................................2221.50300021
...............................................................................................................................................................TAAAGCTAGATTACCAAAGA............................................................................................2021.50300012
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATC.........................................................................................2421.50302001
...........................................................................................................................................................TTCATAAAGCTAGATTACC.................................................................................................1921.50310002
...................................................................................................................TATGCTTTGGCGCTTTAGCTG.......................................................................................................................................2121.50301011
...............................................................................................................................................................TAAAGCTAGATTACCAAACAT...........................................................................................2141.50600033
..............................................................................................................................................................ATAAAGCTAGATTACCAA...............................................................................................1821.00201010
...............................................................................................................................................................TAAAGCTAGATTACCAAAGT............................................................................................2021.00200101
...............................................................................................................................................................TAAAGCTAGATTACCAAAA.............................................................................................1921.00200011
......................................................................................................................GCTTTGGCGCTTTAGCTGTATGAA.................................................................................................................................2421.00200020
................................................................................................................................................................AAAGCTAGATTACCAAAGCATA.........................................................................................2221.00201010
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAAAA........................................................................................2521.00200020
...........................................................................................................................................................TTCATAAAGCTAGATTACCAA...............................................................................................2121.00201010
................................................................................................................................................................AAAGCTAGATTACCAAAG.............................................................................................1821.00201010
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATAA........................................................................................2421.00201010
.......................................................................................................................CTTTGGCGCTTTAGCTGTATGAA.................................................................................................................................2321.00202000
................................................................................................................................................................AAAGCTAGATTACCAAAGCAC..........................................................................................2121.00201010
................................................................................................................................................................AAAGCTAGATTACCAAAGC............................................................................................1921.00201001
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATTT........................................................................................2521.00202000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATG.........................................................................................2321.00201010
..............................................................................................................................................................ATAAAGCTAGATTACCAT...............................................................................................1841.00400004
...............................................................................................................................................................TAAAGCTAGATTACCAAAGAT...........................................................................................2121.00200002
.........................................................................................................................TTGGCGCTTTAGCTGTATGATA................................................................................................................................2221.00200020
.......................................................................................................................CTTTGGCGCTTTAGCTGTAT....................................................................................................................................2021.00202000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCACCA........................................................................................2420.50101000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATGG........................................................................................2420.50101000
................................................................................................................................................................AAAGCTAGATTACCAAAGCATTA........................................................................................2320.50100010
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATC.........................................................................................2320.50100001
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAAT.........................................................................................2420.50100010
dp5
AATAA--------------------AAG-----TGTTTTATCGA---AAGTGTTTAAA----------AGTACAACAATCT--AATCTGTGCTTAA----G--CCCTGCTCTGCTTCTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAAATACTTCATAAAGCTAGATTACCAAAGCATTGGCT-C-TGTGGA----AACTTCATCCA---A-------------ACAA--------TGAAAT-----------------------CCGSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAT..........................................................................................22116371.0016371083097531201475207312651061785530
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAT..........................................................................................23110400.0010400062744871067071284534580218210
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCA...........................................................................................211943.009430726279179319172411
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCA...........................................................................................221857.00857069424131460112588
...............................................................................................................................................................TAAAGCTAGATTACCAAAGC............................................................................................201541.0054112925010712371811310
......................................................................................................................GCTTTGGCGCTTTAGCTGTATGA..................................................................................................................................231509.0050902245514181106123103
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGC............................................................................................211500.005000318596582741243
......................................................................................................................GCTTTGGCGCTTTAGCTGTATG...................................................................................................................................221446.0044609155816132124866
................................................................................................................................................................AAAGCTAGATTACCAAAGCAT..........................................................................................211370.003700284349261711106
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAC..........................................................................................221274.0027401411216130200
..............................................................................................................................................................ATAAAGCTAGATTACCAAAG.............................................................................................201263.0026302254211431220
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATT.........................................................................................231140.0014007818721065122
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATA.........................................................................................231133.001330922403001310
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAC..........................................................................................231131.00131043727060300
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAA..........................................................................................231103.0010309720011200
...............................................................................................................................................................TAAAGCTAGATTACCAAAG.............................................................................................19192.009207240220525
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATA.........................................................................................24174.007405451111650
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATT.........................................................................................24148.0048032111300100
................................................................................................................................................................AAAGCTAGATTACCAAAGCATT.........................................................................................22146.004603075020200
................................................................................................................................................................AAAGCTAGATTACCAAAGCA...........................................................................................20142.004204001000010
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAA..........................................................................................22137.003703510001000
..............................................................................................................................................................ATAAAGCTAGATTACCAAA..............................................................................................19130.003002220130110
.................................................................................................................................................................AAGCTAGATTACCAAAGCAT..........................................................................................20127.002701020112632
........................................................................................................................TTTGGCGCTTTAGCTGTATGA..................................................................................................................................21126.002601310020352
......................................................................................................................GCTTTGGCGCTTTAGCTGTAT....................................................................................................................................21123.002301351120010
......................................................................................................................GCTTTGGCGCTTTAGCTGTATGAA.................................................................................................................................24123.002301520000303
................................................................................................................................................................AAAGCTAGATTACCAAAGCATA.........................................................................................22118.001801610000010
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGA............................................................................................21117.001701310100200
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATAAA.......................................................................................26114.00140900000500
................................................................................................................................................................AAAGCTAGATTACCAAAGC............................................................................................19114.001401211000000
......................................................................................................................GCTTTGGCGCTTTAGCTGTA.....................................................................................................................................20114.00140045310001
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAAA.........................................................................................24113.001301100000200
.............................................................................................................................................................CATAAAGCTAGATTACCAAAGCAT..........................................................................................24112.00120720010200
.............................................................................................TAA----G--CCCTGCTCTGCTTCT.........................................................................................................................................................19112.001201110000000
.......................................................................................................................CTTTGGCGCTTTAGCTGTATGA..................................................................................................................................22112.001201200000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATC.........................................................................................2319.0090330000030
..................................................................................................................................................................AGCTAGATTACCAAAGCAT..........................................................................................1919.0090600020100
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATTT........................................................................................2418.0080400001030
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATG.........................................................................................2318.0080710000000
................................................................................................................................................................AAAGCTAGATTACCAAAGCAC..........................................................................................2118.0080700001000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATAA........................................................................................2418.0080500000300
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATAAA.......................................................................................2517.0070700000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCT...........................................................................................2217.0070312001000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAG..........................................................................................2317.0070120220000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAA.............................................................................................2017.0070600001000
.......................................................................................................................CTTTGGCGCTTTAGCTGTATG...................................................................................................................................2116.0060600000000
..............................................................................................................................................................ATAAAGCTAGATTACCAA...............................................................................................1816.0060400010100
......................................................................................................................GCTTTGGCGCTTTAGCTGT......................................................................................................................................1916.0060040200000
........................................................................................................................TTTGGCGCTTTAGCTGTATG...................................................................................................................................2016.0060200010300
...............................................................................................................................................................TAAAGCTAGATTACCAAA..............................................................................................1815.0050110000012
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAAA.........................................................................................2315.0050500000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAG..........................................................................................2215.0050100130000
................................................................................................................................................................AAAGCTAGATTACCAAAGCATC.........................................................................................2215.0050103000100
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGT............................................................................................2115.0050100013000
...............................................................................................................................................................TAAAGCTAGATTACCAAAA.............................................................................................1914.0040300100000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGT............................................................................................2014.0040110002000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGA............................................................................................2014.0040300001000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATAA........................................................................................2514.0040400000000
......................................................................................................................GCTTTGGCGCTTTAGCTGTATGT..................................................................................................................................2314.0040210000100
...........................................................................................................................................................TTCATAAAGCTAGATTACCA................................................................................................2014.0040101020000
.............................................................................................................................................................CATAAAGCTAGATTACCAAAGC............................................................................................2213.0030120000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATC.........................................................................................2413.0030120000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCT...........................................................................................2113.0030200100000
................................................................................................................................................................AAAGCTAGATTACCAAAG.............................................................................................1813.0030300000000
.................................................................................................................................................................AAGCTAGATTACCAAAGCA...........................................................................................1913.0030300000000
...................................................................................................................................................................GCTAGATTACCAAAGCAT..........................................................................................1813.0030100000110
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATTA........................................................................................2413.0030300000000
........................................................................................................................TTTGGCGCTTTAGCTGTATGAA.................................................................................................................................2213.0030200100000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATG.........................................................................................2413.0030300000000
......................................................................................................................GCTTTGGCGCTTTAGCTGTATT...................................................................................................................................2213.0030000300000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCACA.........................................................................................2313.0030300000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCACC.........................................................................................2313.0030210000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAAA............................................................................................2122.5050500000000
................................................................................................................................................................AAAGCTAGATTACCAAAGCATTT........................................................................................2312.0020200000000
.........................................................................................................................TTGGCGCTTTAGCTGTATGA..................................................................................................................................2012.0020100000001
............................................................................................TTAA----G--CCCTGCTCTGCTTCT.........................................................................................................................................................2012.0020200000000
.............................................................................................................................................................CATAAAGCTAGATTACCAAAGCA...........................................................................................2312.0020110000000
........................................................................................................................TTTGGCGCTTTAGCTGTATGAT.................................................................................................................................2212.0020101000000
......................................................................................................................GCTTTGGCGCTTTAGCTGTAC....................................................................................................................................2112.0020020000000
...........................................................................................................................................................TTCATAAAGCTAGATTACC.................................................................................................1912.0020001010000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCCC..........................................................................................2312.0020110000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAAAA........................................................................................2512.0020200000000
.......................................................................................................................CTTTGGCGCTTTAGCTGTAT....................................................................................................................................2012.0020200000000
.........................................................................................................................TTGGCGCTTTAGCTGTATGAT.................................................................................................................................2111.0010100000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATAAT.......................................................................................2511.0010100000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCCA..........................................................................................2211.0010000100000
droPer2
TTTAGAGT--------------------------GTTATATCGA---AAGTGTTTAAA----------AGTACGACAATCT--AATCTGTGCTTAA----G--CCCTGCTCTGCTTCTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAAATACTTCATAAAGCTAGATTACCAAAGCATTGGCT-C-TGTGGA----AACTTCATCCA---A-------------ACAA--------TGAAAT-----------------------CCGSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAT..........................................................................................22111229.00112297440740517274135548
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAT..........................................................................................2318143.0081430325019711783261257
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCA...........................................................................................211552.0055203515781117
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCA...........................................................................................221396.0039602784337011
................................................................................................................................................................AAAGCTAGATTACCAAAGCAT..........................................................................................211180.00180086229585
...............................................................................................................................................................TAAAGCTAGATTACCAAAGC............................................................................................201154.00154378128404
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGC............................................................................................211130.00130086315251
......................................................................................................................GCTTTGGCGCTTTAGCTGTATG...................................................................................................................................221120.0012001937193213
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAC..........................................................................................22179.007906014140
......................................................................................................................GCTTTGGCGCTTTAGCTGTATGA..................................................................................................................................23168.006803951572
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATA.........................................................................................23156.00560542000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAG.............................................................................................20149.00490314491
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATT.........................................................................................23148.00480341571
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAA..........................................................................................23146.00460421120
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAC..........................................................................................23139.003902501130
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATA.........................................................................................24133.00330312000
...............................................................................................................................................................TAAAGCTAGATTACCAAAG.............................................................................................19125.00251112632
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAA..........................................................................................22125.00250250000
..............................................................................................................................................................ATAAAGCTAGATTACCAAA..............................................................................................19120.0020090371
................................................................................................................................................................AAAGCTAGATTACCAAAGCA...........................................................................................20118.00180130230
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAG..........................................................................................22117.00170110060
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATAA........................................................................................24113.00130130000
................................................................................................................................................................AAAGCTAGATTACCAAAGCATT.........................................................................................22112.0012061230
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATT.........................................................................................24111.0011080111
.............................................................................................TAA----G--CCCTGCTCTGCTTCT.........................................................................................................................................................19111.0011920000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATAAA.......................................................................................2619.009081000
........................................................................................................................TTTGGCGCTTTAGCTGTATGA..................................................................................................................................2119.009050040
..............................................................................................................................................................ATAAAGCTAGATTACCAA...............................................................................................1818.008020060
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATG.........................................................................................2318.008080000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATAA........................................................................................2518.008080000
.............................................................................................................................................................CATAAAGCTAGATTACCAAAGCAT..........................................................................................2417.007040030
................................................................................................................................................................AAAGCTAGATTACCAAAGCATA.........................................................................................2216.006060000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAG..........................................................................................2315.005021110
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGA............................................................................................2115.005050000
........................................................................................................................TTTGGCGCTTTAGCTGTATG...................................................................................................................................2015.005000140
...............................................................................................................................................................TAAAGCTAGATTACCAAA..............................................................................................1814.004040000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATAAA.......................................................................................2514.004040000
.................................................................................................................................................................AAGCTAGATTACCAAAGCAT..........................................................................................2014.004040000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATC.........................................................................................2414.004020020
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGT............................................................................................2113.003010011
................................................................................................................................................................AAAGCTAGATTACCAAAGCAC..........................................................................................2113.003030000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAA.............................................................................................2013.003010002
......................................................................................................................GCTTTGGCGCTTTAGCTGTAT....................................................................................................................................2113.003000030
.....................................................................................................................................................................................TGGCT-C-TGTGGA----AACTTCATCCA---A-------------AC..........................................2613.003300000
......................................................................................................................GCTTTGGCGCTTTAGCTGTA.....................................................................................................................................2013.003011010
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATG.........................................................................................2413.003030000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCTC..........................................................................................2213.003000030
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCT...........................................................................................2112.002010100
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAAAA........................................................................................2512.002020000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAAA.........................................................................................2412.002020000
......................................................................................................................GCTTTGGCGCTTTAGCTGT......................................................................................................................................1912.002000110
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATC.........................................................................................2312.002010010
.....................................................................................................................................................................................TGGCT-C-TGTGGA----AACTTCAT................................................................2012.002200000
..................................................................................................................................................................AGCTAGATTACCAAAGCAT..........................................................................................1912.002010010
......................................................................................................................GCTTTGGCGCTTTAGCTGTATT...................................................................................................................................2212.002000110
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATTC........................................................................................2412.002000002
..............................................................................................................................................................ATAAAGCTAGATTACCAAAAA............................................................................................2112.002011000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCC...........................................................................................2211.001000100
......................................................................................................................GCTTTGGCGCTTTAGCTGTATGAA.................................................................................................................................2411.001010000
droAna3
ATTGTTT-----------------------------------AAAATATATGGTATAT--------AG-------------------TGTTC--------TATAGCTGCTTAACCGATGCTTTGGCGCTTTAGCTGTATGATAGATTTAAA-TACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TCCGCAGG----CCTGTCTTCAA---GG--------------AATAAA--------ATA-A-TAATTC---ATTT--ATATCCTSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAT..........................................................................................22110051.001005116261337809239215692318
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAT..........................................................................................2315616.00561699590536212295061619
...............................................................................................................................................................TAAAGCTAGATTACCAAAGC............................................................................................201496.004966422721299146
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCA...........................................................................................211447.004472306712651162
......................................................................................................................GCTTTGGCGCTTTAGCTGTATG...................................................................................................................................221289.00289716781250
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCA...........................................................................................221266.0026611556537845
..............................................................................................................................................................ATAAAGCTAGATTACCAAAG.............................................................................................201162.0016295496129
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGC............................................................................................211160.001602610239218
................................................................................................................................................................AAAGCTAGATTACCAAAGCAT..........................................................................................211154.0015449166361037
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAC..........................................................................................221136.0013671180731
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATT.........................................................................................231123.001232954612616
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAC..........................................................................................231107.001074970213
...............................................................................................................................................................TAAAGCTAGATTACCAAAG.............................................................................................191104.001049384179
................................................................................................................................................................AAAGCTAGATTACCAAAGCATT.........................................................................................22195.00952738216012
......................................................................................................................GCTTTGGCGCTTTAGCTGTATGA..................................................................................................................................23188.0088262115134
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATT.........................................................................................24176.0076381017614
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATA.........................................................................................24159.005910462100
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATA.........................................................................................23149.00497400002
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAA..........................................................................................23118.00181132101
........................................................................................................................TTTGGCGCTTTAGCTGTATGA..................................................................................................................................21117.00171400111
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAA..........................................................................................22117.0017581210
................................................................................................................................................................AAAGCTAGATTACCAAAGCA...........................................................................................20115.00151100211
.....................................................................................................................TGCTTTGGCGCTTTAGCTGTAT....................................................................................................................................22112.0012720300
.................................................................................................................................................................AAGCTAGATTACCAAAGCAT..........................................................................................20112.0012450021
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAG..........................................................................................22111.0011401600
........................................................................................................................TTTGGCGCTTTAGCTGTATG...................................................................................................................................20111.0011410114
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATTT........................................................................................25110.0010500104
..............................................................................................................................................................ATAAAGCTAGATTACCAAA..............................................................................................1919.009200304
..................................................................................................................................................................AGCTAGATTACCAAAGCAT..........................................................................................1919.009143100
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATC.........................................................................................2319.009090000
......................................................................................................................GCTTTGGCGCTTTAGCTGTAT....................................................................................................................................2119.009050121
......................................................................................................................GCTTTGGCGCTTTAGCTGTATGAA.................................................................................................................................2418.008160001
......................................................................................................................GCTTTGGCGCTTTAGCTGTA.....................................................................................................................................2018.008050102
.............................................................................................................................................................CATAAAGCTAGATTACCAAAGCAT..........................................................................................2417.007070000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAG..........................................................................................2317.007040201
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCT...........................................................................................2215.005230000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGT............................................................................................2015.005100004
................................................................................................................................................................AAAGCTAGATTACCAAAGCATA.........................................................................................2215.005320000
................................................................................................................................................................AAAGCTAGATTACCAAAGCAC..........................................................................................2115.005050000
................................................................................................................................................................AAAGCTAGATTACCAAAGCATC.........................................................................................2215.005050000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCT...........................................................................................2115.005010103
.........................................................................................................................TTGGCGCTTTAGCTGTATGA..................................................................................................................................2014.004310000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATC.........................................................................................2414.004120010
...................................................................................................................................................................GCTAGATTACCAAAGCAT..........................................................................................1814.004021100
................................................................................................................................................................AAAGCTAGATTACCAAAGCATTT........................................................................................2314.004100201
......................................................................................................................GCTTTGGCGCTTTAGCTGTATT...................................................................................................................................2214.004001003
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATTTT.......................................................................................2613.003100002
..........................................................................................TC--------TATAGCTGCTTAACCGAT.........................................................................................................................................................2013.003000003
.......................................................................................................................CTTTGGCGCTTTAGCTGTATGA..................................................................................................................................2213.003300000
........................................................................................................................TTTGGCGCTTTAGCTGTATGAA.................................................................................................................................2213.003120000
...............................................................................................................................................................TAAAGCTAGATTACCAAA..............................................................................................1813.003200100
...............................................................................................................................................................TAAAGCTAGATTACCAAAT.............................................................................................1912.002000002
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATTT........................................................................................2412.002100100
..............................................................................................................................................................ATAAAGCTAGATTACCAA...............................................................................................1812.002100100
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCTG..........................................................................................2312.002000200
................................................................................................................................................................AAAGCTAGATTACCAAAGC............................................................................................1912.002100001
.............................................................................................................................................................CATAAAGCTAGATTACCAAAGCAC..........................................................................................2412.002020000
.........................................................................................................................TTGGCGCTTTAGCTGTATG...................................................................................................................................1912.002100001
..............................................................................................................................................................ATAAAGCTAGATTACCAAACAT...........................................................................................2221.503100011
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATTA........................................................................................2411.001010000
.........................................................................................TTC--------TATAGCTGCTTAACCGAT.........................................................................................................................................................2111.001000001
droBip1
AATAT-----------------------------------------------------------------------------------------------AGTATCTGTTCTACCTGTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAA-TACTTCATAAAGCTAGATTACCAAAGCATGGGTT-TTCGCAGG----TTAATCTTCAT---TAA---------------ATAA------------T-ATACTC---A------TATATASizeHit CountTotal NormTotal
No Reads
droKik1
TACATCAAT-TAAATTATT------------AAAT-------TAAATTA-------------------------------------CTGTTTTT-T----G--GACTGCTCTTCTGACGCTTTGGCGCTTTAGCTGTATGATAGATTTTTACTACTTCATAAAGCTAGATTACCAAAGCATTGGCGGTCTGCAGG---GTAAATCATCAT---AAA-------------TACAAA------------A-TATAGA---A--T--TCGTAGASizeHit CountTotal NormTotal
No Reads
droFic1
AAAGTGTTAAA---------------------------------AATAAGTTGATTA---------------CAACAGGTTACAACCAGTGCTAAAAGAAATAACCTGCTTTGCCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TGTGCAGA----TTAACCATCAA---ATAGACCAC-CACCACA--------------------------------------ATGSizeHit CountTotal NormTotal
No Reads
droEle1
CACAACCAA----------------------CATG-------TTAAAAAGTGTTTAAA---------------------------------------GAATGTGGCTGCTTGACCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TTTGCAGA----TCAATCATCCA---AAA---------------TAAG----TG----------AGATGTAT--T--TCTTTCASizeHit CountTotal NormTotal
No Reads
droRho1
CTATAATTGCA------ATAA----AAGCAATATG-------TGAACTAGTTTTTAAA---------------------------------------TAAAGTAGCTGCCTTGCCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TTTGCAGA----TCAATCATCAA---G-----------------------------------------------T--TTAACTASizeHit CountTotal NormTotal
No Reads
droBia1
TCTATGTT------------------------TTT-------G-------------AA----------------------------------------AAGGAAGCTGCCTTGCCGCTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TCTGCAGA----TCAATCATCAG---TTACAACTTGAAACGGAGTGATTACTTGATAT----TAATAT----TAT--AAATTATSizeHit CountTotal NormTotal
No Reads
droTak1
AATAAGT------------------------AAAT-------ATAAGAAGTGATTTAA------------------------------------------GGCAGCTGCTTTGCCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TTGGCAGA----TCAATCAACGA---ATA---------------TATC-----------------------------------TSizeHit CountTotal NormTotal
No Reads
droEug1
TACA-----------------------------TA-------TCAACAAGTGATTAAA----------------------------------------AGAGAAACTGCTCTGCCGTTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TTGGTAGA----TCAATCATCAA---AAA---------------TAAC----TG---------A-------------------ASizeHit CountTotal NormTotal
No Reads
dm3
TCAGTGATATC-----AGTGAAATA------CATT-------GCAATGAGTGCCTTAG----------------------------------------AGTGAAGCTGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TCTGCAGG----TCAATCGTCAG---AAA---------------CAAT------------T-TAAGAT---ATGCTTGTTTATTSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAT..........................................................................................2212137785.002137785000013558183166965168240661196003302270559153115827656662629011963732223433423953918102469318626492034103961945641173014874445269347785930112121151443872053399703128517387950000000000000000043895461063463539775243405790518021575319918683144365222137944729813096831166850684420062449293711627173680859510832238228722731086126323971826841960331817522014051824281050691257941010084715741469252547591939053092768868913866128131274482418030517857529517423300000402264698531999024933066336602431649326719388170334581331351292175893510633752139932451721583521894672386518946135515071081991263800100100402467286765531122526703335292350135821899979151067841011594176052788762101475186411891106051627129118238000054420011371108401178328441252173646851173251517625603473035205848549808722379110364263765453101415973996488757118474616334818822203814183534196162370281541851791947210118326814004578022291146718331948144016386281189413581151630786822892605161364034687197610728176017261160820170333291533791158547084254946700212275631088399705471139681341645287696024075225346124271048036711144561028511118
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAT..........................................................................................2311069013.0010690130000173122419463161021004010721796245354229302571131227026431610117151096136565689468517552239983514237219602120276140433989233110142917202151643400000000000000000114161329185171566122511151342228217782611929988626150117128734417323044991192163531082161233217561732192927216814811151707035114410598000047492933162012813808423118711069285076616360487943373320340227684155236811100876972876921001561924231801495632877030421432487791804372579101347014022812218531712783628215315127383112863733063240410100583012322231410425011332697410671478081739287743441502259863169456261088185678993783122843866000021577634470307476129157566425741733028482035661115699430824801767274114181831932414806450728064456588119598334041401410773010299653461623813435483926360167119052269139127911921228819502452372613347995323095341105933788148951647411015515911922168328271662200624168811430729461200496425555641455720326970467353280341310082773175611762869104759082527259245
................................................................................................................................................................AAAGCTAGATTACCAAAGCAT..........................................................................................21131438.003143800007003000202000010194032210145991251091251014122315131285837141525262451759337180003522179000000000000000001659196012762216318517816133032481174098201614441314966116162135404140139000610302406900000111303362693033389686856363692870340000066582420313389990562791914225117148118133228120125127134385211002124432000005410801810058232119014143885018234246481416875255113930000375911423193285961115454013826713872942255757194803248212641737230149322317211621198735042185844433549452319135761675697029020102930351085051209256856211957113076553569115389242114171253793481010
......................................................................................................................GCTTTGGCGCTTTAGCTGTATG...................................................................................................................................22130443.003044300001003000000000000619420130211360022326162330178312343418221537911927333010000100000000000000000106541375349669242305844401263013082727143338711203100001901033700001231001629591003847171841768624221122151147229152808810379081019115250229014930713212014490307800000161800000073281924830918932164115215815474119157831213400002629059121752742001791326391935126111127318512146918468641013284192022584396844111238353776446754383639564761479986500792787656135332931325300128611621626301360619181611193237043452486189285154694312566208140547457521025161211966054274652370
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...............................................................................................................................................................TAAAGCTAGATTACCAAAGT............................................................................................201100.001000000000000000000000000000000000000000000000000100000000000000000000000000000000200000000000000000000000000000000000000000000000200000000001001000000000000000000000000100000000010000000100000000001000000000000000002000001000000012000000001010000000000001000011000202000003010000012210200001000000100310018440013001109100212013410
droSim2
TGAATTA------------------------CATT-------GAAATGAGTGCCTCAG----------------------------------------AGTGTAGCTGACTTACCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TGTGCAGA----TCAATCGTCGG---AAA---------------CAAA------------T-TAAGCC---ATGT--TTAGTTASizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAT..........................................................................................22181388.0081388162186520010551057220026516551581730974300134
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAT..........................................................................................23137458.00374589334940058362462676533458398206288001
...................................................................................................................................................................GCTAGATTACCAAAGCAT..........................................................................................1816663.00666300000000006662100000
.....................................................................................................................................................................TAGATTACCAAAGCAT..........................................................................................1611717.00171700000000241711000000
......................................................................................................................................................................AGATTACCAAAGCAT..........................................................................................1511317.00131700000020011314000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCA...........................................................................................2111174.00117410642001117518232537415934000
................................................................................................................................................................AAAGCTAGATTACCAAAGCAT..........................................................................................2111076.001076000150032513819148170000
...............................................................................................................................................................TAAAGCTAGATTACCAAA..............................................................................................181894.0089400000013121762789010000
...............................................................................................................................................................TAAAGCTAGATTACCAAAG.............................................................................................191811.00811161020017151015729600000
....................................................................................................................................................................CTAGATTACCAAAGCAT..........................................................................................171806.008060000000001805000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGC............................................................................................201776.007769411290061719275681427000
...............................................................................................................................................................TAAAGCTAGATTACCA................................................................................................161757.007570000000435745000000
..............................................................................................................................................................ATAAAGCTAGATTACCA................................................................................................171534.005340000000712524000000
..............................................................................................................................................................ATAAAGCTAGATTACC.................................................................................................161463.004630000003001459000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCA...........................................................................................221459.00459101160047576584174815000
..............................................................................................................................................................ATAAAGCTAGATTACCAAA..............................................................................................191397.003970000001514636325100000
...............................................................................................................................................................TAAAGCTAGATTACC.................................................................................................151374.003740000001122368000000
......................................................................................................................GCTTTGGCGCTTTAGCTGTATGA..................................................................................................................................231370.003700014001061203628601500000
......................................................................................................................GCTTTGGCGCTTTAGCTGTATG...................................................................................................................................221267.00267003300141321479301000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAG.............................................................................................201264.002641320100191547201101000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATA.........................................................................................231245.0024500050017949466122531000
...............................................................................................................................................................TAAAGCTAGATTACCAA...............................................................................................171213.00213000000314313180000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATT.........................................................................................231191.0019100080025639921551000
................................................................................................................................................................AAAGCTAGATTACCAAAGCATT.........................................................................................221172.00172000500210311222423000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGC............................................................................................211168.001689004006243139010000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAA..........................................................................................221163.001630013001213237221432000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAC..........................................................................................221135.001350014001002118135000
......................................................................................................................GCTTTGGCGCTTTAGCT........................................................................................................................................171110.0011000000057383210000000
..............................................................................................................................................................ATAAAGCTAGATTACCAA...............................................................................................181101.001010001001116379000000
..................................................................................................................................................................AGCTAGATTACCAAAGCAT..........................................................................................19198.0098000000000098000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAA..........................................................................................23192.00920004004289470108000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATA.........................................................................................24178.007800140084161715157000
........................................................................................................................TTTGGCGCTTTAGCTGTATGA..................................................................................................................................21176.007600010021261557001000
.................................................................................................................................................................AAGCTAGATTACCAAAGCAT..........................................................................................20170.0070000000100069000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAC..........................................................................................23169.0069100000011066000000
...................................................................................................................................................................GCTAGATTACCAAAGCA...........................................................................................17152.0052000000000052000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAG..........................................................................................22151.0051000000001047012000
......................................................................................................................GCTTTGGCGCTTTAGCTG.......................................................................................................................................18135.0035103000100030000000
.......................................................................................................................CTTTGGCGCTTTAGCTGTATGA..................................................................................................................................22135.0035000400611157100000
......................................................................................................................GCTTTGGCGCTTTAGCTGTA.....................................................................................................................................20132.00320020005100015000000
......................................................................................................................GCTTTGGCGCTTTAGCTGTAT....................................................................................................................................21127.002700000036348300000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATT.........................................................................................24127.0027000100000022103000
................................................................................................................................................................AAAGCTAGATTACCAAAGCATA.........................................................................................22126.0026000100000013084000
................................................................................................................................................................AAAGCTAGATTACCAAA..............................................................................................17124.0024000000120021000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATAA........................................................................................24122.0022000300100030510000
...................................................................................................................................................................GCTAGATTACCAAAGCATT.........................................................................................19120.0020000000000020000000
........................................................................................................................TTTGGCGCTTTAGCTGTATGAA.................................................................................................................................22120.002000100012952000000
..............................................................................................................................................................ATAAAGCTAGATTAC..................................................................................................15119.0019000000100018000000
...................................................................................................................................................................GCTAGATTACCAAAGC............................................................................................16116.0016000000000016000000
................................................................................................................................................................AAAGCTAGATTACCAAAGCA...........................................................................................20116.001600020000036113000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAG..........................................................................................23115.0015000000000015000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCT...........................................................................................21114.0014100000000013000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATC.........................................................................................23114.0014000000000014000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAA.............................................................................................19113.001300000001155100000
........................................................................................................................TTTGGCGCTTTAGCTGTATG...................................................................................................................................20112.001200000021008001000
................................................................................................................................................................AAAGCTAGATTACCAAAGC............................................................................................19112.0012000000100011000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAAA.........................................................................................24112.001200020001124002000
......................................................................................................................GCTTTGGCGCTTTAGCTGT......................................................................................................................................19111.0011000000100010000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATAAA.......................................................................................25111.001100000030421010000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATAA........................................................................................25111.001100020010103013000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAAA.........................................................................................23111.001100000010324010000
......................................................................................................................GCTTTGGCGCTTTAGCTGTATGAA.................................................................................................................................24111.001100000035210000000
..........................................................................................................................TGGCGCTTTAGCTGTATG...................................................................................................................................18110.0010000000000010000000
...................................................................................................................................................................GCTAGATTACCAAAG.............................................................................................15210.0020000000000020000000
...................................................................................................................................................................GCTAGATTACCAAAGCAC..........................................................................................18110.0010000000000010000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATC.........................................................................................2418.00800000000106001000
.....................................................................................................................................................................TAGATTACCAAAGCATT.........................................................................................1718.00800000000008000000
...................................................................................................................................................................GCTAGATTACCAAAGCAG..........................................................................................1818.00800000000008000000
................................................................................................................................................................AAAGCTAGATTACCAAAG.............................................................................................1818.00800000011006000000
................................................................................................................................................................AAAGCTAGATTACCA................................................................................................1517.00700000000007000000
.............................................................................................................................................................CATAAAGCTAGATTACCAAAGCAT..........................................................................................2417.00700020000005000000
...................................................................................................................................................................GCTAGATTACCAAAGCAA..........................................................................................1817.00700000000007000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCT...........................................................................................2216.00600010000005000000
..........................................................................................................................TGGCGCTTTAGCTGTATGA..................................................................................................................................1916.00600000000006000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAA.............................................................................................2016.00600000021201000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGA............................................................................................2015.00500000000310001000
.......................................................................................................................CTTTGGCGCTTTAGCTGTATG...................................................................................................................................2115.00500000002011100000
.....................................................................................................................................................................TAGATTACCAAAGCA...........................................................................................1515.00500000000113000000
................................................................................................................................................................AAAGCTAGATTACCAA...............................................................................................1615.00500000000005000000
....................................................................................................................................................................CTAGATTACCAAAGC............................................................................................1515.00500000000005000000
................................................................................................................................................................AAAGCTAGATTACCAAAGCATAA........................................................................................2315.00500000000013001000
................................................................................................................................................................AAAGCTAGATTACCAAAGCATC.........................................................................................2215.00500000000004001000
.......................................................................................................................CTTTGGCGCTTTAGCTGTATGAA.................................................................................................................................2315.00500000020120000000
................................................................................................................................................................AAAGCTAGATTACCAAAGCATTT........................................................................................2314.00400000000000013000
................................................................................................................................................................AAAGCTAGATTACCAAAGCAA..........................................................................................2114.00400000000001003000
.........................................................................................................................TTGGCGCTTTAGCTGTATG...................................................................................................................................1914.00400000000004000000
......................................................................................................................................................................AGATTACCAAAGCATT.........................................................................................1614.00400000000004000000
....................................................................................................................................................................CTAGATTACCAAAGCA...........................................................................................1614.00400000000004000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATAAA.......................................................................................2614.00400010010002000000
...................................................................................................................................................................GCTAGATTACCAAAGCATA.........................................................................................1914.00400000000004000000
......................................................................................................................GCTTTGGCGCTTTAGCTGTATT...................................................................................................................................2214.00400000000001300000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCTC..........................................................................................2213.00300000000003000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCTA..........................................................................................2213.00300000000003000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATG.........................................................................................2313.00300010000002000000
.................................................................................................................................................................AAGCTAGATTACCAA...............................................................................................1513.00300000002001000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCG...........................................................................................2113.00300000000003000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATTA........................................................................................2513.00300000000000003000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATAT........................................................................................2513.00300000000003000000
....................................................................................................................................................................CTAGATTACCAAAGCATA.........................................................................................1813.00300000000101001000
............................................................................................................................................ATAGATTTAAACTACTTCAA...............................................................................................................2012.00200010000000010000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATGCT.......................................................................................2512.00200000000002000000
......................................................................................................................GCTTTGGCGCTTTAGCTGTAA....................................................................................................................................2112.00200000001100000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATTA........................................................................................2412.00200000000010001000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAAAA........................................................................................2512.00200010001000000000
................................................................................................................................................................AAAGCTAGATTACCAAAGA............................................................................................1912.00200000020000000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATAT........................................................................................2412.00200000000001001000
...................................................................................................GTGTAGCTGACTTACCATT.........................................................................................................................................................1912.00200200000000000000
......................................................................................................................GCTTTGGCGCTTTAGCTGTATC...................................................................................................................................2212.00200000001001000000
...............................................................................................................................................................TAAAGCTAGATTACCAAT..............................................................................................1812.00200000000002000000
................................................................................................................................................................AAAGCTAGATTACCAAAGCAC..........................................................................................2112.00200000000001001000
droSec2
TGAATAA------------------------CATT-------GAAATGAGTGCCTCAG----------------------------------------AGTGTAGCTGACTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TGTGCAGA----TCAATCGTCAG---AAA---------------CAAA------------T-TAAGCC---ATGT--TTATTTASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAT..........................................................................................22118227.00182276466345035254786
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAT..........................................................................................23111479.00114794145167215754087
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCA...........................................................................................211909.009095715370215
................................................................................................................................................................AAAGCTAGATTACCAAAGCAT..........................................................................................211502.005022528041129
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCA...........................................................................................221471.004712573032152
......................................................................................................................GCTTTGGCGCTTTAGCTGTATG...................................................................................................................................221387.0038715829272
...............................................................................................................................................................TAAAGCTAGATTACCAAAGC............................................................................................201340.00340922124203
...............................................................................................................................................................TAAAGCTAGATTACCAAAG.............................................................................................191244.002443348199
..............................................................................................................................................................ATAAAGCTAGATTACCAAAG.............................................................................................201144.0014417135109
......................................................................................................................GCTTTGGCGCTTTAGCTGTATGA..................................................................................................................................231117.00117364725
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGC............................................................................................21190.0090356643
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATT.........................................................................................23183.0083498620
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAC..........................................................................................22159.005942287
................................................................................................................................................................AAAGCTAGATTACCAAAGCATT.........................................................................................22156.0056304148
................................................................................................................................................................AAAGCTAGATTACCAAAGCA...........................................................................................20149.004937219
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATA.........................................................................................23136.003623445
........................................................................................................................TTTGGCGCTTTAGCTGTATGA..................................................................................................................................21123.002312092
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAA..........................................................................................22123.002314153
.................................................................................................................................................................AAGCTAGATTACCAAAGCAT..........................................................................................20120.00207463
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATT.........................................................................................24120.00209416
...................................................................................................GTGTAGCTGACTTGCCATT.........................................................................................................................................................19118.001815021
......................................................................................................................GCTTTGGCGCTTTAGCTGTATGAA.................................................................................................................................24118.001813140
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATA.........................................................................................24115.001513011
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAA..........................................................................................23114.00147016
...............................................................................................................................................................TAAAGCTAGATTACCAAAGT............................................................................................20113.00130418
......................................................................................................................GCTTTGGCGCTTTAGCTGTAT....................................................................................................................................21113.00133055
........................................................................................................................TTTGGCGCTTTAGCTGTATG...................................................................................................................................20111.00113224
..............................................................................................................................................................ATAAAGCTAGATTACCAAA..............................................................................................19110.00101018
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAC..........................................................................................2319.0095112
................................................................................................................................................................AAAGCTAGATTACCAAAGCATA.........................................................................................2219.0095013
.......................................................................................................................CTTTGGCGCTTTAGCTGTATGA..................................................................................................................................2219.0097020
................................................................................................................................................................AAAGCTAGATTACCAAAGC............................................................................................1918.0086002
......................................................................................................................GCTTTGGCGCTTTAGCTGTA.....................................................................................................................................2016.0062040
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAG..........................................................................................2216.0064011
.......................................................................................................................CTTTGGCGCTTTAGCTGTATG...................................................................................................................................2115.0052102
................................................................................................................................................................AAAGCTAGATTACCAAAGCATC.........................................................................................2215.0054001
......................................................................................................................GCTTTGGCGCTTTAGCTGT......................................................................................................................................1915.0051040
..............................................................................................................................................................ATAAAGCTAGATTACCAA...............................................................................................1815.0052003
.............................................................................................................................................................CATAAAGCTAGATTACCAAAGCAT..........................................................................................2415.0054100
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATG.........................................................................................2314.0044000
................................................................................................................................................................AAAGCTAGATTACCAAAGCAC..........................................................................................2113.0033000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCT...........................................................................................2213.0030201
......................................................................................................................GCTTTGGCGCTTTAGCTGTATGATAG...............................................................................................................................2613.0030120
...............................................................................................................................................................TAAAGCTAGATTACCAAA..............................................................................................1813.0031020
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATAA........................................................................................2513.0031020
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCT...........................................................................................2113.0031101
........................................................................................................................TTTGGCGCTTTAGCTGTATGAA.................................................................................................................................2212.0021100
..............................................................................................................................................................ATAAAGCTAGATTACCAAAT.............................................................................................2012.0020002
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGT............................................................................................2112.0020002
...............................................................................................................................................................TAAAGCTAGATTACCAAGC.............................................................................................1912.0021001
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATC.........................................................................................2312.0022000
..................................................................................................AGTGTAGCTGACTTGCCATT.........................................................................................................................................................2012.0020110
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAAA.........................................................................................2312.0022000
.........................................................................................................................TTGGCGCTTTAGCTGTATGA..................................................................................................................................2012.0022000
....................................................................................................TGTAGCTGACTTGCCATT.........................................................................................................................................................1812.0021010
..................................................................................................................................................................AGCTAGATTACCAAAGCAT..........................................................................................1912.0021010
...................................................................................................................................................................GCTAGATTACCAAAGCAT..........................................................................................1812.0021100
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAAA.........................................................................................2412.0021010
..............................................................................................................................................................ATAAAGCTAGATTACCAAACAT...........................................................................................2222.0044000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAA.............................................................................................2012.0020002
.........................................................G----------------------------------------AGTGTAGCTGACTTGCCATT.........................................................................................................................................................2112.0020002
.......................................................CAG----------------------------------------AGTGTAGCTGACTTGCCATT.........................................................................................................................................................2312.0020101
................................................................................................................................................................AAAGCTAGATTACCAAAG.............................................................................................1812.0021001
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATAA........................................................................................2412.0022000
......................................................................................................................GCTTTGGCGCTTTAGCTGTATC...................................................................................................................................2211.0010010
.............................................................................................................................................................CATAAAGCTAGATTACCAAAGCA...........................................................................................2311.0011000
................................................................................................................................................................AAAGCTAGATTACCAAAGCAG..........................................................................................2111.0011000
................................................................................................................................................................AAAGCTAGATTACCAAAGCATTA........................................................................................2311.0011000
.................................................................................................................................................................AAGCTAGATTACCAAAGCA...........................................................................................1911.0011000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGA............................................................................................2011.0010001
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCACC.........................................................................................2311.0011000
.........................................................................................................................TTGGCGCTTTAGCTGTATG...................................................................................................................................1911.0011000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAAAA........................................................................................2511.0010010
........................................................AG----------------------------------------AGTGTAGCTGACTTGCCATT.........................................................................................................................................................2211.0010001
..................................................................................................AGTGTAGCTGACTTGCCA...........................................................................................................................................................1811.0011000
droYak3
ATAAGTGA------------------------ATT-------G-------------AG----------------------------------------AGTGTAGCTGCCTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTATACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TCTGCAGA----TCAATCATCAG---A-----------------CAAA------------T-TAGGCC---ATGC--T----TASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAT..........................................................................................2219063.00906332693879462752307811930030
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAT..........................................................................................2315795.0057955194338219054122534800010
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCA...........................................................................................211474.004741288201134108120000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCA...........................................................................................221292.002920167102199040000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGC............................................................................................201275.0027520561308545110000
......................................................................................................................GCTTTGGCGCTTTAGCTGTATG...................................................................................................................................221269.002690241457691140000
......................................................................................................................GCTTTGGCGCTTTAGCTGTATGA..................................................................................................................................231253.00253043193103400000
................................................................................................................................................................AAAGCTAGATTACCAAAGCAT..........................................................................................211216.002160951552262170000
................................................................................................................................................................AAAGCTAGATTACCAAAGCATT.........................................................................................221107.001070534222800000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATT.........................................................................................231105.001050524032710000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAC..........................................................................................22194.0094078111400000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGC............................................................................................21166.006621426121920000
......................................................................................................................GCTTTGGCGCTTTAGCTGTA.....................................................................................................................................20161.0061065410000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAC..........................................................................................23148.0048024000510000
...............................................................................................................................................................TAAAGCTAGATTACCAAAG.............................................................................................19132.00320170021300000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAG.............................................................................................20129.0029212301920000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATA.........................................................................................24126.0026016700210000
......................................................................................................................GCTTTGGCGCTTTAGCTGTAT....................................................................................................................................21124.0024151301400000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATA.........................................................................................23122.0022013700200000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATT.........................................................................................24120.002008422310000
......................................................................................................................GCTTTGGCGCTTTAGCTGTATGAA.................................................................................................................................24114.0014011210000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAG..........................................................................................22114.001409010400000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATC.........................................................................................23112.001203900000000
................................................................................................................................................................AAAGCTAGATTACCAAAGCA...........................................................................................20111.0011010000100000
......................................................................................................................GCTTTGGCGCTTTAGCTGT......................................................................................................................................19110.001000721000000
........................................................................................................................TTTGGCGCTTTAGCTGTATGA..................................................................................................................................2119.00904210200000
.......................................................................................................................CTTTGGCGCTTTAGCTGTATGA..................................................................................................................................2219.00904301010000
.................................................................................................................................................................AAGCTAGATTACCAAAGCAT..........................................................................................2019.00904100040000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAA..........................................................................................2218.00806200000000
.............................................................................................................................................................CATAAAGCTAGATTACCAAAGCAT..........................................................................................2418.00802310110000
................................................................................................................................................................AAAGCTAGATTACCAAAGCATC.........................................................................................2217.00700600100000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAA..........................................................................................2315.00501200200000
...................................................................................................................................................................GCTAGATTACCAAAGCAT..........................................................................................1815.00502200100000
......................................................................................................................GCTTTGGCGCTTTAGCTGTAC....................................................................................................................................2115.00500500000000
......................................................................................................................GCTTTGGCGCTTTAGCTGC......................................................................................................................................1914.00400400000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATG.........................................................................................2414.00403001000000
..................................................................................................................................................................AGCTAGATTACCAAAGCAT..........................................................................................1914.00402000200000
......................................................................................................................GCTTTGGCGCTTTAGCTGTATGT..................................................................................................................................2314.00401210000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATG.........................................................................................2314.00403000100000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCT...........................................................................................2213.00300000300000
...............................................................................................................................................................TAAAGCTAGATTACCAAA..............................................................................................1813.00302000100000
......................................................................................................................GCTTTGGCGCTTTAGCTG.......................................................................................................................................1812.00200200000000
......................................................................................................................GCTTTGGCGCTTTAGCTGTATT...................................................................................................................................2212.00200002000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATC.........................................................................................2412.00200100100000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAG..........................................................................................2312.00200001100000
................................................................................................................................................................AAAGCTAGATTACCAAAGCATA.........................................................................................2212.00201100000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCT...........................................................................................2112.00200000200000
.........................................................................................................................TTGGCGCTTTAGCTGTATGA..................................................................................................................................2012.00201100000000
...................................................................................................GTGTAGCTGCCTTGCCATT.........................................................................................................................................................1912.00200200000000
..............................................................................................................................................................ATAAAGCTAGATTACCAA...............................................................................................1812.00202000000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGA............................................................................................2012.00200000020000
................................................................................................................................................................AAAGCTAGATTACCAAAGCATG.........................................................................................2212.00202000000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAA..............................................................................................1912.00200000200000
.................................................................................................................................................................AAGCTAGATTACCAAAGCATT.........................................................................................2112.00202000000000
.....................................................................................................................TGCTTTGGCGCTTTAGCTGTAT....................................................................................................................................2212.00202000000000
.................................................................................................................................................................AAGCTAGATTACCAAAGCAC..........................................................................................2011.00100100000000
....................................................................................................................TTGCTTTGGCGCTTTAGCTG.......................................................................................................................................2011.00110000000000
droEre2
ATTGCA---------------------------TT-------GGAATAAGTGACTTAG----------------------------------------AGTGCAGCTGCCTTGCCATTGCTTTGGCGCTTTAGCTGTATGATAGATTTAAACTACTTCATAAAGCTAGATTACCAAAGCATTGGCT-TCTGCAGA----TCAATCTTCAG---AAA---------------GAAA------------C-TAGGCC---CTGC--TTATTCASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAT..........................................................................................22115240.00152406221147376273458536362
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAT..........................................................................................2319882.00988235788123011929472753174
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCA...........................................................................................2111142.0011428019295932050
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCA...........................................................................................221538.005383145171531462
...............................................................................................................................................................TAAAGCTAGATTACCAAAGC............................................................................................201414.0041411817125362260
......................................................................................................................GCTTTGGCGCTTTAGCTGTATG...................................................................................................................................221307.0030715171230192140
................................................................................................................................................................AAAGCTAGATTACCAAAGCAT..........................................................................................211256.0025615224142550
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGC............................................................................................211154.001544210912900
...............................................................................................................................................................TAAAGCTAGATTACCAAAG.............................................................................................191139.001393113016880
......................................................................................................................GCTTTGGCGCTTTAGCTGTATGA..................................................................................................................................231134.0013459148582416
..............................................................................................................................................................ATAAAGCTAGATTACCAAAG.............................................................................................201133.001332001016960
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATT.........................................................................................23198.009880300780
................................................................................................................................................................AAAGCTAGATTACCAAAGCATT.........................................................................................22180.0080631005110
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAC..........................................................................................22178.0078581201520
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAC..........................................................................................23166.0066198000381
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAA..........................................................................................23149.0049160001320
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATA.........................................................................................23138.003832000222
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAA..........................................................................................22129.002924111020
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATA.........................................................................................24124.002421000120
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAG..........................................................................................23121.002120000190
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATT.........................................................................................24120.002016011020
..............................................................................................................................................................ATAAAGCTAGATTACCAAA..............................................................................................19114.00146000080
................................................................................................................................................................AAAGCTAGATTACCAAAGCA...........................................................................................20114.001412010010
......................................................................................................................GCTTTGGCGCTTTAGCTGTAT....................................................................................................................................21112.00124011240
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATG.........................................................................................23112.001212000000
................................................................................................................................................................AAAGCTAGATTACCAAAGCATA.........................................................................................2218.0085110100
.................................................................................................................................................................AAGCTAGATTACCAAAGCAT..........................................................................................2018.0084100210
.......................................................................................................................CTTTGGCGCTTTAGCTGTATGA..................................................................................................................................2217.0075000200
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCG...........................................................................................2117.0077000000
................................................................................................................................................................AAAGCTAGATTACCAAAGCATC.........................................................................................2216.0063100110
......................................................................................................................GCTTTGGCGCTTTAGCTGTATT...................................................................................................................................2216.0060006000
................................................................................................................................................................AAAGCTAGATTACCAAAGC............................................................................................1916.0064000020
.............................................................................................................................................................CATAAAGCTAGATTACCAAAGCAT..........................................................................................2416.0065100000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCT...........................................................................................2116.0061000050
......................................................................................................................GCTTTGGCGCTTTAGCTGTATGAA.................................................................................................................................2415.0053100010
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCAG..........................................................................................2215.0053011000
......................................................................................................................GCTTTGGCGCTTTAGCTGTA.....................................................................................................................................2014.0041200010
...................................................................................................................................................................GCTAGATTACCAAAGCAT..........................................................................................1814.0041000030
...............................................................................................................................................................TAAAGCTAGATTACCAAAGT............................................................................................2014.0040000400
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATC.........................................................................................2314.0042010100
........................................................................................................................TTTGGCGCTTTAGCTGTATGA..................................................................................................................................2114.0042010010
..............................................................................................................................................................ATAAAGCTAGATTACCAA...............................................................................................1814.0043000010
................................................................................................................................................................AAAGCTAGATTACCAAAGCATG.........................................................................................2213.0031000020
..............................................................................................................................................................ATAAAGCTAGATTACCAAACAT...........................................................................................2213.0030000030
......................................................................................................................GCTTTGGCGCTTTAGCTGT......................................................................................................................................1913.0030000120
.................................................................................................................................................................AAGCTAGATTACCAAAGCATT.........................................................................................2113.0033000000
..............................................................................................................................................................ATAAAGCTAGATTACCAT...............................................................................................1812.0020000020
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATTA........................................................................................2412.0022000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATAT........................................................................................2512.0021000010
.......................................................................................................................CTTTGGCGCTTTAGCTGTATG...................................................................................................................................2112.0022000000
.................................................................................................................................................................AAGCTAGATTACCAAAGCA...........................................................................................1912.0022000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATAAA.......................................................................................2512.0022000000
......................................................................................................................GCTTTGGCGCTTTAGCTGTATGAT.................................................................................................................................2412.0021100000
.........................................................................................................................TTGGCGCTTTAGCTGTATGA..................................................................................................................................2012.0022000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCATAAA.......................................................................................2612.0022000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATTT........................................................................................2412.0022000000
...............................................................................................................................................................TAAAGCTAGATTACCAAAGCATAA........................................................................................2412.0022000000
........................................................................................................................TTTGGCGCTTTAGCTGTATG...................................................................................................................................2012.0020000020
......................................................................................................................GCTTTGGCGCTTTAGCTGTATGT..................................................................................................................................2312.0021010000
......................................................................................................................GCTTTGGCGCTTTAGCTGTATGATAGT..............................................................................................................................2711.0011000000
........................................................................................................................................................TACTTCATAAAGCTAGATTACCAAAGCAT..........................................................................................2911.0011000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAGCAAA.........................................................................................2411.0011000000
..............................................................................................................................................................ATAAAGCTAGATTACCAAAA.............................................................................................2011.0010000010

Generated: 10/20/2015 at 11:45 PM