dgr-mir-7

intron [Dgri\GH21981-in]; utr5 [utr5_plus_5311]; pre_miRNA [Dgri\mir-7-RM]; miRNA [Dgri\miR-7-RA]

TCTGCAAATCATCATCAATCAATCAATGCCTGAAACTAACTATCGGTTTAAATGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGTTAATAACAATAAATCCCTTGTCTCCTAACGGCGCGCATTGTGCTCTTCATTATTTCTTAACGGTGGTGCCACTAACAACAATGATAACA **********************************************..(((((...((((..(((.(((.((.((((((((((((...........)))))))..))))).)).))))))..))))...)))))....********************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M041 female body	V109 male body
...............................................................TGGAAGACTAGTGATTTTGTT......................................................................................................	21	0	1	368.00	368	232	136
...............................................................TGGAAGACTAGTGATTTTGTTGTT...................................................................................................	24	0	1	321.00	321	243	78
...............................................................TGGAAGACTAGTGATTTTGTTG.....................................................................................................	22	0	1	297.00	297	181	116
...............................................................TGGAAGACTAGTGATTTTGTTGT....................................................................................................	23	0	1	89.00	89	60	29
...............................................................TGGAAGACTAGTGATTTTGT.......................................................................................................	20	0	1	88.00	88	42	46
................................................................GGAAGACTAGTGATTTTGTTGTT...................................................................................................	23	0	1	31.00	31	31	0
................................................................GGAAGACTAGTGATTTTGTT......................................................................................................	20	0	1	21.00	21	21	0
................................................................GGAAGACTAGTGATTTTGTTG.....................................................................................................	21	0	1	19.00	19	19	0
...............................................................TGGAAGACTAGTGATTTTGTTT.....................................................................................................	22	1	1	14.00	14	10	4
...............................................................TGGAAGACTAGTGATTTTGTTGTTT..................................................................................................	25	0	1	10.00	10	5	5
................................................................GGAAGACTAGTGATTTTGTTGT....................................................................................................	22	0	1	5.00	5	5	0
...............................................................TGGAAGACTAGTGATTTTGTTA.....................................................................................................	22	1	1	4.00	4	1	3
...............................................................TGGAAGACTAGTGATTTCGTTG.....................................................................................................	22	1	1	3.00	3	0	3
...............................................................TGGAAGACTAGTGATTTTGTTGCT...................................................................................................	24	1	1	3.00	3	1	2
...............................................................TGGAAGACTAGCGATTTTGTT......................................................................................................	21	1	1	3.00	3	2	1
...............................................................TGGAAGACTAGTGATTTTGTTGTTA..................................................................................................	25	1	1	3.00	3	3	0
.......................................................................................................CAATAAATCCCTTGTCTCCTAA.............................................................	22	0	1	3.00	3	3	0
...............................................................TGGAAGACTAGTGATTTTG........................................................................................................	19	0	1	2.00	2	1	1
................................................................GGAAGACTAGTGATTTTGT.......................................................................................................	19	0	1	2.00	2	2	0
...............................................................TGGAAGACTAGTGATTTTGTCG.....................................................................................................	22	1	1	2.00	2	0	2
...............................................................TGGAAGACTAGTGATTTTGTTGTC...................................................................................................	24	1	1	2.00	2	0	2
...............................................................TGGAAGACTAGTGATTTAGTT......................................................................................................	21	1	1	1.00	1	0	1
................................................................GGAAGACTAGTGATTTTGCTG.....................................................................................................	21	1	1	1.00	1	1	0
..............................................................CTGGAAGACTAGTGATTTTGTT......................................................................................................	22	1	1	1.00	1	0	1
...............................................................TGTAAGACTAGTGATTTTGTT......................................................................................................	21	1	1	1.00	1	0	1
...............................................................TGGAAGACAAGTGATTTTGTTGTT...................................................................................................	24	1	1	1.00	1	0	1
.........................................................................................................ATAAATCCCTTGTCTCCTAAT............................................................	21	1	1	1.00	1	1	0
...............................................................TGGAAGACTAGTGATTTAGTTGTT...................................................................................................	24	1	1	1.00	1	0	1
...............................................................TGGAAGACTTGTGATTTTGTT......................................................................................................	21	1	1	1.00	1	0	1
...............................................................TGGAAGACTAGTGATTTCGTTGT....................................................................................................	23	1	1	1.00	1	0	1
...............................................................TGGAAGACTAGTGATTTTGTCGTT...................................................................................................	24	1	1	1.00	1	0	1
...............................................................TGGATGACTAGTGATTTTGTT......................................................................................................	21	1	1	1.00	1	0	1
...............................................................TGGAAGGCTAGTGATTTTGTTGT....................................................................................................	23	1	1	1.00	1	0	1
.............................................................ATTGGAAGACTAGTGATTTTGTTGT....................................................................................................	25	2	1	1.00	1	1	0
...............................................................CGGAAGACTAGTGATTTTGTTG.....................................................................................................	22	1	1	1.00	1	0	1
...............................................................TGGACGACTAGTGATTTTGTTG.....................................................................................................	22	1	1	1.00	1	0	1
.......................................................................................................CAATAAATCCCTTGTCTCCTA..............................................................	21	0	1	1.00	1	1	0
...............................................................TGGAAGACTAGTCATTTTGTT......................................................................................................	21	1	1	1.00	1	0	1
................................................................GGAAGACTAGTGATTTTG........................................................................................................	18	0	1	1.00	1	1	0
........................................................................................................AATAAATCCCTTGTCTCCTAA.............................................................	21	0	1	1.00	1	1	0
...............................................................TGCAAGACTAGTGATTTTGTTGTT...................................................................................................	24	1	1	1.00	1	0	1
.................................................................GAAGACTAGTGATTTTGTTGTT...................................................................................................	22	0	1	1.00	1	1	0
...............................................................TGGAAGACTAGTGATTTTGTAA.....................................................................................................	22	2	1	1.00	1	0	1
................................................................GGAAGACTAGTGATTTTGTTATT...................................................................................................	23	1	1	1.00	1	1	0
...............................................................TGGAAGACTAGTGATTTAGTTG.....................................................................................................	22	1	1	1.00	1	0	1
................................................................TGAAGACTAGTGATTTTGTTG.....................................................................................................	21	1	1	1.00	1	0	1
..............................................................TTGGAAGACTAGTGATTTTGTTG.....................................................................................................	23	1	1	1.00	1	1	0
...............................................................TGGAAGACGAGTGATTTTGTT......................................................................................................	21	1	1	1.00	1	0	1
...............................................................TGGAAGACTAGTGATTTTGTTGGCA..................................................................................................	25	3	1	1.00	1	1	0
...............................................................TGGAAGACTAGTAATTTTGT.......................................................................................................	20	1	1	1.00	1	0	1
...............................................................TGGAAGACTAGTGATTTTGTTGTTG..................................................................................................	25	1	1	1.00	1	1	0
................................................................GGAAGACTGGTGATTTTGTTGTT...................................................................................................	23	1	1	1.00	1	1	0
...............................................................TAGAAGACTAGTGATTTTGT.......................................................................................................	20	1	1	1.00	1	0	1
................................................................TGAAGACTAGTGATTTTGTT......................................................................................................	20	1	1	1.00	1	1	0
...............................................................TGTAAGACTAGTGATTTTGTTG.....................................................................................................	22	1	1	1.00	1	1	0
...............................................................TGCAAGACTAGTGATTTTGTTG.....................................................................................................	22	1	1	1.00	1	0	1
...............................................................TGGAAGACTAGTGATTTTGTGGATA..................................................................................................	25	3	1	1.00	1	1	0
...............................................................TGGAAGACTAGTGATTCTGTTGTT...................................................................................................	24	1	1	1.00	1	0	1
...............................................................TGGAAGACTAGTGATTTGGTTT.....................................................................................................	22	2	1	1.00	1	0	1
...............................................................TGGAAGACTAGTGATTTTGTCGT....................................................................................................	23	1	1	1.00	1	0	1
..............................................................CTGGAAGACTAGTGATTTTGTTGTT...................................................................................................	25	1	1	1.00	1	0	1
...............................................................TGGAAGACTAATGATTTTGTTG.....................................................................................................	22	1	1	1.00	1	0	1
...............................................................TGGAAGACTAGTGATTTTGTAAA....................................................................................................	23	3	1	1.00	1	1	0
...............................................................TGGAAGACTAGTGATTTTGTTGTTAAA................................................................................................	27	3	1	1.00	1	1	0
...............................................................TGGAAGACTAGTGATTTTGTTGTTAA.................................................................................................	26	2	1	1.00	1	1	0
...............................................................TGGAAGACTAGTGATTTTGTTGTA...................................................................................................	24	1	1	1.00	1	1	0
...............................................................TGGAAGACTAGAGATTTTGTTGTT...................................................................................................	24	1	1	1.00	1	0	1
...............................................................TGGAAGACTAGTGATATTGTTGAT...................................................................................................	24	2	1	1.00	1	0	1
...............................................................TGGAGGACTAGTGATTTTGTT......................................................................................................	21	1	1	1.00	1	0	1
...............................................................TGCAAGACTAGTGATTTTGTT......................................................................................................	21	1	1	1.00	1	0	1
...............................................................TGCAAGACTAGTGATTTTGTTGT....................................................................................................	23	1	1	1.00	1	0	1
.................................................................TAAGACTAGTGATTTTGTT......................................................................................................	19	1	1	1.00	1	1	0
..................................................................AAGACTAGTGATTTTGTT......................................................................................................	18	0	1	1.00	1	1	0
................................................................GGAAGACTAGTGATTTTGTTA.....................................................................................................	21	1	1	1.00	1	1	0
........................................................................................................AATAAATCCCTTGTCTCCT...............................................................	19	0	1	1.00	1	1	0
...............................................................TGGAAGACTAGTGATTTCGTTGTT...................................................................................................	24	1	1	1.00	1	0	1
................................................................CGAAGACTAGTGATTTTGTTGTT...................................................................................................	23	1	1	1.00	1	0	1
...............................................................TGGAAGACTAGTGATTTTGTTGTAA..................................................................................................	25	2	1	1.00	1	1	0
...............................................................TGGAAGACTAGTGATTTCGT.......................................................................................................	20	1	1	1.00	1	0	1
..................................................................AAGACTAGTGATTTTGTTG.....................................................................................................	19	0	1	1.00	1	1	0
..............................................................GTGGAAGACTAGTGATTTTGTTGTT...................................................................................................	25	1	1	1.00	1	1	0
...............................................................TGGAATACTAGTGATTTTGTTG.....................................................................................................	22	1	1	1.00	1	1	0
...............................................................TGGAAGACTAATGATTTTGTT......................................................................................................	21	1	1	1.00	1	0	1
...............................................................TGCAAGACTAGTGCTTTTGTTGTT...................................................................................................	24	2	1	1.00	1	0	1
...............................................................TGGAAGACTAGTGATTTTGTTGTTTT.................................................................................................	26	1	1	1.00	1	1	0
..............................................................ATGGAAGACTAGTGATTTTGTT......................................................................................................	22	0	1	1.00	1	1	0
...............................................................TGGAAGACTAGTGATTTTGTTGTAACG................................................................................................	27	3	1	1.00	1	1	0
...............................................................TGGACGACTAGTGATTTTGTTGT....................................................................................................	23	1	1	1.00	1	1	0
...............................................................TTGAAGACTAGTGATTTTGTTG.....................................................................................................	22	1	1	1.00	1	0	1
...............................................................TCGAAGACTAGTGATTTTGTTGTT...................................................................................................	24	1	1	1.00	1	0	1
....................................................................................................TAACAATAAATCCCTTGTCTCCT...............................................................	23	0	1	1.00	1	1	0
...............................................................TGGAAGACTAGTGATTTTTTTGTT...................................................................................................	24	1	1	1.00	1	1	0
...............................................................TGGAAGACTAGTGATTTTGTTC.....................................................................................................	22	1	1	1.00	1	0	1
................................................................GGAAGACTAGTGATTTTGTTGTC...................................................................................................	23	1	1	1.00	1	1	0
....................................................................GACTAGTGATTTTGTTGTT...................................................................................................	19	0	2	0.50	1	1	0
.....................................................................ACTAGCGATTTTGTTGTT...................................................................................................	18	1	3	0.33	1	1	0
.............................................................................TATTGTTGTTTGGTCTATG..........................................................................................	19	2	16	0.06	1	1	0

Species	Coordinate	ID	Type	Alignment
droGri2	scaffold_15245:15782168-15782353 +	dgr-mir-7	Known_mirbase	TCT----GC------------AAA---------------------------------TCATCATCAATCAATCAATGCCTGAAACTAAC-----T-ATCGGT--------------------TT--------------AAATGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGTTAA---TAACAATAAATCCCTTGTCTCCTAACGGCGCGCAT-TG-TGCTCTTCATTA-------TTTCTTAACGGTGGTGCCAC-----------TAACA-A-CAATGA--------------------TAACA
droVir3	scaffold_12823:2295116-2295317 -	dvi-mir-7	Known_mirbase	TCA----AT----CAATCAGCCAAT-------------------------C--------------AATCAGCCAATGCCTCAAACTAAC-----CG---------------------------TCGT------C-TCCAAATGCTTTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTCTGCTAA---TAACAATAAATCCCTTGTCTTCTTATGGCGCGCAT-TC-TGCTCTTCATTTATAATAAT-----TTCGGTGGTGCCACAAAACAATAAATAATA-A-TAACAA--------------------TAACA
droMoj3	scaffold_6496:1650000-1650178 -	dmo-mir-7	Known_mirbase	TACTCAAGTGCTT--------------------------------TGCAT-----------CATT-----------------AACAAACCTAACCGT-------------------------TCGTC-GTA-----TCGAGTGCTTGCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTCTGCTAA---TAACAATAAATCCCTTGTCTTCTTATGGCTCGCAT-TG-AGCTCTTCATTTCAAATC--TCGTTAACGGTGGTGCCA----------------CAA-CT-----AA---------------------C
droWil2	scf2_1100000004513:3423567-3423757 -	dwi-mir-7	Known_mirbase	TCT----TA----CCAACTGCTAACTAAC--TC-----TTAACTCTCTAA---------------------------------CTTAAC-----T-CTGGGTTAACAAAATAAAATCAAAAATTGTG-T-GTGG-T-GGAATGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTAATAAAATTAACAATAAATCCCTTGTCTTCTTATGGCGTGTATTTAAAGCTCTTCATTT----------------GTTG-T----------------T--------------------------------------
dp5	3:8655602-8655797 -	dps-mir-7	Known_mirbase	C------GC------------AAAT-------CAAATCG---C--TCCATCCA-AAC-------T-----------------AACTAAC-----CGA-------------------------TTGGC-CTCTCC-TGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTCTGCTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATCTG-TGCTCTTCATTC-------T-----ATCGATGGT----------------TAACCAAATT-----AAACGGAACTCGACATTCAAAAAA
droPer2	scaffold_4:2540040-2540233 -	dpe-mir-7	Known_mirbase	C------GC------------AAAT-------CAAATCG---C--TCCATCCA-AAC-------T-----------------AACTAAC-----CGA-------------------------TTGGC-CTCTCC-TGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTCTGCTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATCTG-TGCTCTTCATTC-------T-----ATCGATGGT----------------TAACCAAATT-----AAACGGAACTCGACATTC--AACA
droAna3	scaffold_13266:4109351-4109492 -	dan-mir-7	Known_mirbase	CAT----T-------------------------------------------TG-AA-TTAAAACC-----------------AACTAAC-----C----------------------------TGGGAGTCCTG-TGGAAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTTTATGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTCG--GCTCATCACTC-------T-----ATC-------------------------------------------------------------
droBip1	scf7180000396427:2554443-2554591 -			TCT----GG------------AAAC-------GGTGTCT---C--TGCATCTG-GAT--GTAACC-----------------AACTAAC-----CGA-------------------------T---------CC-TGGGAGTGCTCTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCACTTG--GCTCATCACT------------------------------------------------------------------------------
droKik1	scf7180000302471:964144-964298 +			TC---------------------------CATC-----GTAAC--TCCATCCA-G----------------------------ACTAAC-----CGA-------------------------TTGGG-T-CTCCTTGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCACCTG-TGCTCTTCATTC-------T-----ATCGAT----------------------------T-----AA---------------------A
droFic1	scf7180000454039:1798022-1798201 +			------------------------------ATC-----GTAACTCTCCATCAA-AACTCGACAAT-----------------AACTAACT---CCGA-------------------------TTGGC-T-CTCC-TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAT---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------T-----ATCGATGGT----------------TAAT-AA-TAACAC----------------------ACA
droEle1	scf7180000491201:759711-759883 +			----------------------------------------AAC--TC-------AACTCAACAGT-----------------AACTAACCAAACCG----------------------GGGATTGGC-T-CTCC-TGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------T-----GTCGAAGGT----------------TAACCAA-TTAAACTA-----------------------
droRho1	scf7180000780104:106002-106175 +			T----------------------------GATC-----GTAAC--TCCATCCA-AACTCAATAAT-----------------AACTAAC-----CGA-------------------------TTGGC-T-CTCC-TGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCATCATTC-------T-----ATCGAAGGT----------------TAACCAA-TTAA---------------------------
droBia1	scf7180000302291:2793491-2793670 -			------------------------------ATC-----GTAACTCTCCATCCA-AACTCAACAAT-----------------AACTAAC-----CGA-------------------------TTGGC-C-CTCC-TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGATCTTCATTC-------T-----ATCGATGGT----------------TAACC-A-TAAAACTA--------------------AAC
droTak1	scf7180000415401:123935-124116 +			T----------------------------GATC-----GTAAC--TCCATCCA-AACTCAACAAT-----------------AACTAAC-----CGA-------------------------TTGGC-T-CTCC-TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------C-----ATCGATGGT----------------TAAC-------AACTAC-------TGG----C--TAATA
droEug1	scf7180000409474:1467511-1467691 -			T----------------------------GATCTA---GTAAC--TCCATCCAAAACTCAACAAT-----------------AACTAAC-----CGA-------------------------TTGGC-T-CTCC-TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCACCTG-TGCTCTGCATTC-------T-----AACGATGGT----------------TAACCAA-TAAGACTA-----------------------
dm3	chr2R:16493512-16493697 +	dme-mir-7	Known_mirbase	TAT----GTGCTT----------------GATC-----GTAAC--TCCATCCA-AACTCGATATT-----------------AACTAAC-----CGA-------------------------TTGGT-C-CTCC-TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------T-----ATCGATGGT----------------TAACCAA-TAAAACTA-----------------------
droSim2	2r:17063071-17063254 +	dsi-mir-7	Known_mirbase	T------GTGCTT----------------GATC-----GTAAC--TCCATCCA-AACTCGATATT-----------------AACTAAC-----CGA-------------------------TTGGT-C-CTCC-TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------T-----ATCGATGGT----------------TAACCAA-TAAAACTA-----------------------
droSec2	scaffold_1:14047816-14047999 +	dse-mir-7	Known_mirbase	T------GTGCTT----------------GATC-----GTAAC--TCCATCCA-AACTCGATATT-----------------AACTAAC-----CGA-------------------------TTGGT-C-CTCC-TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------T-----ATCGATGGT----------------TAACCAA-TAAAACTA-----------------------
droYak3	2R:12702725-12702869 -	dya-mir-7	Known_mirbase	-----------------------------------------------CATACA-AACTCGTTATT-----------------AACTAAC-----CGA-------------------------CTGGT-C-CTCC-TGGGAGTGCATTTCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------T-----ATC-------------------------------------------------------------
droEre2	scaffold_4845:10640137-10640313 +	der-mir-7	Known_mirbase	T----------------------------GATC-----GTAAC--CCCATCCA-AACTCGTTATT-----------------AACTAAC-----CGA-------------------------TTGGT-C-CTCC-TGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------T-----ATCGATGGT----------------TAACCAA-TAAAACT------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droGri2

TCT----GC------------AAA---------------------------------TCATCATCAATCAATCAATGCCTGAAACTAAC-----T-ATCGGT--------------------TT--------------AAATGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGTTAA---TAACAATAAATCCCTTGTCTCCTAACGGCGCGCAT-TG-TGCTCTTCATTA-------TTTCTTAACGGTGGTGCCAC-----------TAACA-A-CAATGA--------------------TAACA	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
........................................................................................................................................................TGGAAGACTAGTGATTTTGTT...................................................................................................................................................	21	1	368.00	368	232	136
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTT................................................................................................................................................	24	1	321.00	321	243	78
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTG..................................................................................................................................................	22	1	297.00	297	181	116
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGT.................................................................................................................................................	23	1	89.00	89	60	29
........................................................................................................................................................TGGAAGACTAGTGATTTTGT....................................................................................................................................................	20	1	88.00	88	42	46
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTT................................................................................................................................................	23	1	31.00	31	31	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTT...................................................................................................................................................	20	1	21.00	21	21	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTG..................................................................................................................................................	21	1	19.00	19	19	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTT..................................................................................................................................................	22	1	14.00	14	10	4
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTT...............................................................................................................................................	25	1	10.00	10	5	5
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGT.................................................................................................................................................	22	1	5.00	5	5	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTA..................................................................................................................................................	22	1	4.00	4	1	3
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTA...............................................................................................................................................	25	1	3.00	3	3	0
...................................................................................................................................................................................................CAATAAATCCCTTGTCTCCTAA.......................................................................................................	22	1	3.00	3	3	0
........................................................................................................................................................TGGAAGACTAGTGATTTTG.....................................................................................................................................................	19	1	2.00	2	1	1
.........................................................................................................................................................GGAAGACTAGTGATTTTGT....................................................................................................................................................	19	1	2.00	2	2	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTC................................................................................................................................................	24	1	2.00	2	0	2
.....................................................................................................................................................................................................ATAAATCCCTTGTCTCCTAAT......................................................................................................	21	1	1.00	1	1	0
...................................................................................................................................................................................................CAATAAATCCCTTGTCTCCTA........................................................................................................	21	1	1.00	1	1	0
.........................................................................................................................................................GGAAGACTAGTGATTTTG.....................................................................................................................................................	18	1	1.00	1	1	0
....................................................................................................................................................................................................AATAAATCCCTTGTCTCCTAA.......................................................................................................	21	1	1.00	1	1	0
..........................................................................................................................................................GAAGACTAGTGATTTTGTTGTT................................................................................................................................................	22	1	1.00	1	1	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTAA..................................................................................................................................................	22	1	1.00	1	0	1
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGGCA...............................................................................................................................................	25	1	1.00	1	1	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTG...............................................................................................................................................	25	1	1.00	1	1	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTAAA.................................................................................................................................................	23	1	1.00	1	1	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAA.............................................................................................................................................	27	1	1.00	1	1	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAA..............................................................................................................................................	26	1	1.00	1	1	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTA................................................................................................................................................	24	1	1.00	1	1	0
...........................................................................................................................................................AAGACTAGTGATTTTGTT...................................................................................................................................................	18	1	1.00	1	1	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTA..................................................................................................................................................	21	1	1.00	1	1	0
....................................................................................................................................................................................................AATAAATCCCTTGTCTCCT.........................................................................................................	19	1	1.00	1	1	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTAA...............................................................................................................................................	25	1	1.00	1	1	0
...........................................................................................................................................................AAGACTAGTGATTTTGTTG..................................................................................................................................................	19	1	1.00	1	1	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTT..............................................................................................................................................	26	1	1.00	1	1	0
.......................................................................................................................................................ATGGAAGACTAGTGATTTTGTT...................................................................................................................................................	22	1	1.00	1	1	0
................................................................................................................................................................................................TAACAATAAATCCCTTGTCTCCT.........................................................................................................	23	1	1.00	1	1	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTC..................................................................................................................................................	22	1	1.00	1	0	1
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTC................................................................................................................................................	23	1	1.00	1	1	0
.............................................................................................................................................................GACTAGTGATTTTGTTGTT................................................................................................................................................	19	2	0.50	1	1	0

droVir3

TCA----AT----CAATCAGCCAAT-------------------------C--------------AATCAGCCAATGCCTCAAACTAAC-----CG---------------------------TCGT------C-TCCAAATGCTTTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTCTGCTAA---TAACAATAAATCCCTTGTCTTCTTATGGCGCGCAT-TC-TGCTCTTCATTTATAATAAT-----TTCGGTGGTGCCACAAAACAATAAATAATA-A-TAACAA--------------------TAACA	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells	SRR2096013 Ovary_Strain_9_oxidized	SRR2096014 Ovary_Strain_160_oxidized	SRR2096026 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096038 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096050 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096055 Ovary_Min_43	SRR2096056 Ovary_Min_46	SRR2096057 Ovary_Min_50	SRR2096058 Ovary_Min_98	SRR2096059 Ovary_Min_164	SRR2096060 Ovary_Min_193	SRR2096061 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096072 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096079 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096080 embryo_0-2h from 15to16 day old nondysgenic mothers	SRR2096081 embryo_0-2h from 15to16 day old nondysgenic mothers
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTG..................................................................................................................................................	22	1	122595.00	122595	2	11	2319	507	314	1367	1457	2937	3329	5244	1492	433	1625	1066	1678	1062	695	1830	610	867	1702	638	1650	637	994	904	2248	2092	7759	7883	2774	8046	1033	607	922	1015	1912	1111	342	1386	2	11	10	5	7	10	4	10	13	9	27	15	12	13	13	2	4	10	31	381	3983	966	14	1281	1313	8255	7310	6260	3	1	3	1	13	3	3803	1585	1738	5372	5602
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGT.................................................................................................................................................	23	1	77980.00	77980	1	10	750	1446	224	163	456	1040	3325	907	2669	185	410	330	743	486	269	932	307	500	136	326	872	309	576	578	1788	1449	658	613	225	591	533	54	398	883	706	547	203	140	20	48	28	29	26	71	76	60	116	137	246	210	129	157	128	14	7	54	385	183	863	195	31	576	780	10258	9276	6428	14	15	10	8	11	5	3744	2253	2473	5872	6306
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTT................................................................................................................................................	24	1	66252.00	66252	2	4	2127	6553	535	230	495	388	2733	736	2228	9	51	22	1421	855	391	1579	829	900	132	745	1848	610	809	1211	3127	2989	1089	1242	432	1130	120	141	80	394	322	176	279	298	11	10	34	450	353	1431	1155	1215	2414	1508	2759	1183	795	802	603	85	80	144	1081	439	1374	437	216	739	1255	916	799	1488	33	16	33	20	32	25	870	479	470	559	677
........................................................................................................................................................TGGAAGACTAGTGATTTTGTT...................................................................................................................................................	21	1	40959.00	40959	0	22	1035	433	146	192	393	325	893	683	632	30	47	164	2785	1596	1160	2453	1078	1412	115	1497	2411	237	267	274	811	863	771	877	337	867	118	55	125	179	125	111	66	154	5	10	5	6	4	13	4	6	17	31	57	44	45	43	34	14	8	144	205	104	4880	483	2	147	372	1489	1366	1808	10	11	9	7	13	5	1116	267	296	1043	1097
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTC...............................................................................................................................................	25	1	24215.00	24215	0	0	228	711	36	404	45	1	16	859	61	5	7	12	13	19	2	12	12	36	311	10	65	22	25	47	58	50	1866	1801	686	1691	4	193	0	6	0	1	15	417	29	58	49	226	197	1032	890	555	1194	1434	2614	1323	835	814	625	28	23	94	1834	97	8	221	24	27	19	37	26	17	3	12	2	12	5	2	22	17	19	18	26
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTAA.................................................................................................................................................	23	1	13809.00	13809	0	0	89	14	18	1	24	9	80	7	42	36	162	66	4	1	5	2	1	4	1	2	3	25	105	91	283	143	13	24	6	19	181	0	139	253	460	182	54	0	0	1	1	1	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	30	11	2	0	217	97	3036	2664	1435	0	0	0	0	0	0	808	269	283	1105	1298
........................................................................................................................................................TGGAAGACTAGTGATTTTGT....................................................................................................................................................	20	1	8654.00	8654	0	12	345	62	13	73	29	192	255	197	213	20	26	62	379	262	162	334	166	137	20	202	390	28	31	23	76	63	36	66	23	52	16	23	23	22	30	19	3	23	4	5	2	2	4	8	5	12	19	15	26	19	12	15	16	3	4	99	50	29	1615	308	7	4	35	383	375	420	1	4	2	0	2	1	257	81	99	292	311
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAA..............................................................................................................................................	26	1	7879.00	7879	0	0	21	8	11	0	3	1	41	1	13	6	49	12	2	0	1	2	1	3	0	1	3	8	85	171	399	313	9	18	3	17	287	0	246	447	439	238	4	1	2	3	3	0	0	0	0	0	0	1	1	0	0	0	1	0	0	0	1	7	1	1	0	68	47	1155	1015	754	0	0	2	1	1	0	468	156	175	523	629
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTC..................................................................................................................................................	22	1	7867.00	7867	0	3	132	116	30	501	66	3	6	325	13	20	18	37	4	3	1	4	3	5	358	6	14	38	23	37	42	31	1332	1271	481	1241	3	119	0	4	1	6	14	296	31	30	34	22	11	28	22	15	16	26	40	41	15	19	16	1	0	30	141	16	18	156	0	33	34	82	89	66	1	2	0	4	1	3	49	28	26	52	62
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTA..................................................................................................................................................	22	1	7860.00	7860	0	0	67	15	24	8	54	89	219	76	136	81	158	284	22	11	17	33	11	16	12	11	23	30	73	88	178	223	60	98	31	85	95	3	103	104	174	112	18	10	2	3	5	1	1	2	3	1	3	1	8	1	3	1	1	0	0	0	1	13	64	18	0	87	109	846	832	926	1	1	0	2	3	2	577	138	150	588	614
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAA.............................................................................................................................................	27	1	6175.00	6175	0	0	20	5	3	0	1	0	26	0	14	10	35	8	0	0	0	0	0	0	0	0	0	0	41	112	287	202	2	3	0	5	216	0	215	301	354	175	4	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	60	33	1063	861	603	0	0	0	0	0	0	363	114	103	395	536
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTA...............................................................................................................................................	25	1	4787.00	4787	0	0	34	13	25	7	23	8	132	11	68	16	116	20	9	1	2	11	3	11	3	3	11	15	49	104	270	285	26	48	14	51	143	1	80	224	199	108	21	2	4	3	5	15	14	7	7	6	7	7	12	4	1	3	3	0	0	0	2	11	6	11	1	36	41	470	411	486	0	0	3	1	0	1	289	82	83	274	314
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTT...............................................................................................................................................	25	1	3643.00	3643	0	0	74	266	22	9	12	27	135	65	118	3	22	7	59	25	23	46	52	38	7	22	80	20	24	60	188	169	83	102	37	116	23	5	9	60	28	30	14	17	1	0	0	9	9	52	44	34	94	51	141	72	50	47	59	4	2	3	69	40	40	52	2	39	43	107	121	106	0	0	0	3	5	0	67	19	27	58	76
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTAA...............................................................................................................................................	25	1	3614.00	3614	0	0	12	4	5	0	2	0	9	0	7	8	37	5	1	2	0	1	1	0	0	0	0	6	48	42	126	85	7	10	1	7	108	0	87	168	178	103	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	30	16	698	652	346	0	0	0	0	0	0	168	61	71	217	275
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTAAA................................................................................................................................................	24	1	3236.00	3236	0	0	60	5	4	0	2	3	37	1	36	11	90	18	0	0	0	0	0	0	0	0	1	4	39	24	103	38	1	2	0	2	57	1	41	61	158	44	38	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	3	0	0	0	91	35	598	530	278	0	0	0	0	0	0	176	80	78	211	274
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTC................................................................................................................................................	24	1	2961.00	2961	0	0	25	663	5	97	7	0	5	70	7	7	3	0	2	2	0	5	1	3	104	1	3	5	3	6	4	3	473	409	134	310	3	47	0	6	0	3	6	58	7	12	11	2	3	9	6	1	10	12	18	11	3	8	7	0	2	4	42	5	5	29	2	13	11	49	56	24	0	1	2	0	0	2	8	29	23	21	33
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTAAA..............................................................................................................................................	26	1	2902.00	2902	0	0	8	3	5	0	0	0	18	0	11	1	33	2	0	0	0	0	0	0	0	0	0	0	24	33	116	39	2	2	0	2	69	0	51	90	113	62	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	1	0	29	14	575	519	266	0	0	0	0	0	0	157	61	75	234	277
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGA.................................................................................................................................................	23	1	2582.00	2582	0	0	15	20	5	12	4	18	23	24	23	3	12	7	15	15	4	22	9	6	5	14	22	5	11	17	37	19	63	81	34	57	20	7	15	38	60	26	12	6	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	2	38	4	1	13	16	513	389	223	0	0	0	0	0	0	134	40	59	146	216
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTCC...............................................................................................................................................	25	1	2301.00	2301	0	0	12	11	4	117	1	0	0	9	1	0	0	0	0	0	0	0	0	1	127	0	2	2	0	5	2	0	494	533	176	461	0	98	0	0	0	0	0	133	1	3	4	2	1	4	3	4	3	2	10	3	5	1	2	0	1	7	12	1	0	30	1	4	4	0	2	0	0	1	0	0	0	0	0	1	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTA................................................................................................................................................	24	1	1753.00	1753	0	0	4	36	1	0	1	3	6	5	5	7	19	3	1	1	0	1	2	2	3	1	2	3	9	17	36	30	11	13	8	2	23	0	11	61	50	31	4	3	1	1	0	5	0	2	2	2	3	3	6	2	3	1	3	0	0	1	3	2	3	0	0	3	16	307	265	198	2	0	0	1	0	0	126	33	48	124	172
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTT..................................................................................................................................................	22	1	1514.00	1514	0	2	47	26	2	8	10	60	47	79	27	5	8	14	50	30	22	67	24	42	25	32	51	14	4	4	19	29	30	51	16	41	5	4	6	4	11	8	4	9	0	3	1	3	0	1	1	1	3	3	0	3	2	3	4	0	2	12	6	37	139	46	0	10	15	60	59	41	0	0	0	0	0	0	35	11	6	35	35
........................................................................................................................................................TGGAAGACTAGTGATTTTG.....................................................................................................................................................	19	1	1049.00	1049	0	0	72	4	1	9	10	9	3	19	3	0	2	0	53	48	17	39	33	21	15	27	65	5	7	1	11	5	27	43	11	35	3	5	3	3	5	5	1	13	0	0	1	0	0	1	1	0	1	1	0	0	0	1	0	0	0	1	0	0	158	14	1	5	12	36	37	39	2	0	0	0	0	2	30	8	5	26	34
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTCC..............................................................................................................................................	26	1	838.00	838	0	0	18	5	3	42	6	0	0	8	0	0	0	0	0	4	0	0	1	3	22	0	12	0	0	6	4	4	160	183	67	155	0	27	0	0	0	0	0	62	0	0	0	0	0	0	2	0	0	4	1	2	0	0	0	0	0	0	1	0	0	5	3	4	7	0	0	0	3	4	2	3	3	2	0	0	0	0	0
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTCTTA.......................................................................................................	22	1	645.00	645	0	0	55	58	17	9	5	6	2	0	1	0	0	1	29	11	4	6	3	3	3	5	0	9	7	10	16	10	42	11	11	11	7	0	2	6	6	30	9	5	0	0	0	6	4	4	4	14	14	1	6	2	2	2	1	0	1	0	3	28	4	2	0	6	46	0	0	1	11	9	15	7	26	14	1	0	0	0	1
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTCA.................................................................................................................................................	23	1	642.00	642	0	0	9	1	4	17	13	0	0	36	7	8	10	13	0	0	0	0	0	0	14	0	0	4	2	4	5	3	59	63	19	50	1	5	2	15	13	10	4	16	1	2	1	0	0	0	1	0	3	1	1	1	1	0	1	0	0	0	1	2	0	4	0	3	4	53	46	39	0	0	0	0	0	0	14	8	10	14	24
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTCC.................................................................................................................................................	23	1	554.00	554	0	0	32	1	4	80	7	0	0	2	2	0	0	0	0	0	0	0	0	1	32	1	0	5	5	0	3	1	75	78	24	81	0	42	0	0	0	0	7	36	0	1	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	2	0	0	18	0	0	6	0	0	0	0	1	1	1	0	0	0	0	0	0	0
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTAT......................................................................................................	22	1	521.00	521	0	0	38	2	4	1	6	4	3	0	0	0	2	1	14	1	2	10	7	3	3	8	5	13	23	28	50	35	27	17	9	27	9	3	13	8	13	2	12	10	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	2	0	26	46	3	8	2	2	1	3	1	2	4	2	0	1	0	2
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTCA..............................................................................................................................................	26	1	458.00	458	0	0	1	2	1	5	3	1	1	20	0	1	3	2	0	0	0	0	0	1	6	0	0	1	2	3	8	3	90	98	26	79	2	7	2	19	16	11	0	19	0	0	2	1	0	1	0	0	0	2	0	0	0	0	0	0	0	0	2	0	0	3	0	0	3	3	2	1	0	0	0	0	1	0	0	0	1	2	1
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAT..............................................................................................................................................	26	1	426.00	426	0	0	1	1	2	0	1	0	0	1	0	0	0	0	1	0	0	0	1	1	0	0	0	1	5	4	16	16	2	1	1	4	10	0	6	20	13	7	1	0	0	1	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	62	73	43	0	0	0	0	0	0	26	13	14	35	39
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTCA...............................................................................................................................................	25	1	353.00	353	0	0	2	2	0	6	1	0	0	0	2	2	8	6	0	0	0	0	0	0	3	0	0	1	2	2	3	1	39	23	12	32	0	1	0	7	2	9	5	8	1	3	1	0	1	0	1	0	0	0	0	1	1	0	0	0	0	0	1	5	0	1	0	1	1	43	35	15	0	0	0	0	0	0	11	9	14	20	9
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGC.................................................................................................................................................	23	1	330.00	330	0	1	1	227	0	0	1	1	5	2	5	0	0	0	2	0	1	1	0	0	2	1	2	1	2	0	0	2	0	0	1	3	2	0	1	0	0	0	0	2	0	1	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	4	0	0	2	2	18	3	12	0	0	0	0	0	0	7	4	2	3	3
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGAA................................................................................................................................................	24	1	311.00	311	0	0	2	4	0	1	1	0	0	5	0	1	3	2	2	0	0	0	0	0	1	1	1	1	3	1	7	5	3	6	3	7	5	1	7	7	21	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	4	2	58	52	23	0	0	0	0	0	0	9	4	10	20	22
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTT..............................................................................................................................................	26	1	301.00	301	0	0	3	14	2	2	1	7	19	11	12	0	1	0	2	2	0	2	2	2	0	0	1	0	1	3	11	8	2	11	4	10	3	0	6	7	10	5	0	0	0	0	0	1	0	5	3	8	8	2	9	6	4	5	4	0	0	0	4	2	5	3	1	1	3	12	13	11	0	0	0	0	0	0	6	3	5	5	8
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTCT..............................................................................................................................................	26	1	298.00	298	0	0	1	6	4	2	1	0	0	10	0	0	0	0	0	0	0	1	1	2	6	1	2	1	0	1	0	0	38	44	27	55	0	2	0	0	0	0	0	12	0	0	1	0	1	5	2	4	7	5	18	9	2	7	2	1	0	0	8	0	0	2	0	4	0	1	0	0	0	0	0	0	0	0	0	1	0	0	1
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGAAA...............................................................................................................................................	25	1	284.00	284	0	0	19	1	0	0	0	1	1	0	2	1	2	0	0	0	0	0	0	0	0	0	0	1	4	1	12	4	1	1	0	2	4	0	2	4	11	0	4	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	1	56	64	17	0	0	0	0	0	0	11	3	5	20	23
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTG..................................................................................................................................................	21	1	241.00	241	0	1	218	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	3	0	0	0	1	0	0	0	0	0	6	4
........................................................................................................................................................TGGAAGACTAGTGATTTTGTC...................................................................................................................................................	21	1	236.00	236	0	2	10	51	1	3	3	2	3	7	1	0	2	2	1	4	2	1	0	4	6	3	4	2	1	1	4	0	15	21	6	17	0	2	0	0	1	1	0	3	0	0	0	0	0	1	0	0	0	1	0	0	0	1	0	0	0	2	6	0	11	5	0	0	1	2	5	6	0	0	0	0	0	0	1	0	3	3	2
........................................................................................................................................................TGGAAGACTAGTGATTTTGTAA..................................................................................................................................................	22	1	231.00	231	0	0	4	0	1	0	2	0	3	0	3	0	3	6	2	0	0	2	0	1	3	0	1	0	2	2	7	3	0	0	0	0	1	0	3	3	11	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	9	2	0	4	2	42	41	10	0	0	0	0	0	0	17	4	3	15	16
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTAA.............................................................................................................................................	27	1	221.00	221	0	0	1	0	0	0	0	0	1	0	1	0	2	0	0	0	0	0	0	0	0	0	0	1	0	5	13	10	0	2	0	1	6	0	14	27	12	12	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	32	26	21	0	0	0	0	0	0	5	2	2	7	15
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTA..............................................................................................................................................	26	1	217.00	217	0	0	1	0	0	0	0	0	2	1	1	2	3	0	1	1	0	0	0	0	1	0	0	1	1	3	12	4	1	8	0	5	5	0	7	13	9	5	0	0	0	1	1	0	1	0	0	1	1	1	1	0	0	0	0	0	0	0	0	1	0	0	0	1	2	25	28	18	0	0	0	0	0	0	9	2	3	16	18
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTA.......................................................................................................	21	1	200.00	200	0	0	16	11	2	0	1	7	10	1	2	0	1	0	3	1	4	2	3	2	0	3	0	4	5	6	5	7	26	19	8	18	2	3	1	2	2	0	2	4	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	3	2	2	0	0	4	0	0	0	1	0	0	1	2	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAT.............................................................................................................................................	27	1	193.00	193	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	4	2	0	0	0	0	4	0	3	5	7	5	0	0	0	0	1	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	45	39	19	0	0	0	0	0	0	12	3	9	13	16
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTAAA............................................................................................................................................	28	1	192.00	192	0	0	3	1	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	4	3	0	0	0	0	2	0	0	3	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	54	44	20	0	0	0	0	0	0	9	5	1	18	16
........................................................................................................................................................TGGAAGACTAGTGATTTT......................................................................................................................................................	18	1	189.00	189	0	0	6	0	4	7	7	4	4	11	2	0	1	0	11	6	1	5	4	6	3	1	6	7	3	3	5	4	7	11	2	8	0	4	1	3	2	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	0	2	1	2	3	4	5	0	0	0	0	0	0	2	1	0	3	3
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTT................................................................................................................................................	23	1	186.00	186	0	0	169	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	2	0	0	1	1	1	2	1	0	1	0	1	0	1	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTCC..................................................................................................................................................	22	1	180.00	180	0	0	16	1	1	11	0	0	0	7	0	0	0	0	0	0	0	0	0	1	19	0	0	1	1	0	1	1	22	24	9	33	0	4	0	0	0	0	0	13	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	1	0	0	4	0	0	3	3	0	0	0	0	0	0	0	0	0	0	1	0	1
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTAA......................................................................................................	22	1	144.00	144	0	0	8	2	0	0	1	2	1	0	0	0	1	0	0	3	0	1	1	0	0	2	2	7	6	9	12	12	15	4	5	13	2	1	2	3	2	1	0	3	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	5	10	0	0	0	1	0	5	0	1	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTC..............................................................................................................................................	26	1	141.00	141	0	0	0	12	1	1	0	0	1	1	1	0	2	0	0	0	0	0	2	0	0	0	0	1	1	1	1	0	8	8	3	6	0	1	0	0	0	1	0	1	0	0	0	1	3	4	7	2	9	9	15	10	7	2	3	0	0	0	9	0	0	2	0	0	0	1	0	1	0	0	0	1	0	0	0	0	1	0	1
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTCCC.............................................................................................................................................	27	1	130.00	130	0	0	2	0	1	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	2	0	1	3	1	23	37	7	26	0	2	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTAAA.................................................................................................................................................	23	1	118.00	118	0	0	3	0	1	0	0	0	0	1	2	0	2	2	0	0	0	0	0	0	0	0	0	0	5	1	3	0	0	0	0	0	2	0	0	1	9	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	21	19	15	0	0	0	0	0	0	5	2	4	7	9
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTG...............................................................................................................................................	25	1	116.00	116	0	0	3	7	0	0	1	0	5	6	3	0	0	0	1	0	1	1	0	0	0	0	0	0	1	7	4	8	0	5	1	3	4	0	1	1	2	1	0	0	0	0	0	0	0	0	0	1	2	1	1	3	1	2	1	0	0	0	1	0	1	2	0	1	3	5	6	4	0	0	0	0	0	0	2	1	1	4	7
..............................................................................................................................................................ACTAGTGATTTTGTTGTT................................................................................................................................................	18	1	112.00	112	0	0	3	1	1	2	13	5	31	12	18	0	0	0	2	0	0	1	0	0	0	0	2	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	3	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	3	1	0	0	0	0	1	0	0	0	1	1	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTA...................................................................................................................................................	21	1	110.00	110	0	0	0	0	0	0	0	0	0	1	1	1	2	2	0	4	1	3	0	1	1	0	3	0	2	0	1	1	4	4	0	1	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	4	2	0	1	1	15	14	13	0	0	0	0	0	0	5	2	3	7	6
............................................................................................................................................................AGACTAGTGATTTTGTTGTT................................................................................................................................................	20	1	110.00	110	0	0	1	1	7	5	11	1	11	4	21	0	0	0	3	2	5	3	0	0	1	0	2	5	0	1	1	4	0	0	0	0	0	1	0	0	0	0	3	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	6	1	0	0	1	0	0	0	0	2	0	1	0	1	0	0	0	0	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTT...................................................................................................................................................	20	1	109.00	109	0	2	103	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0
...........................................................................................................................................................AAGACTAGTGATTTTGTTG..................................................................................................................................................	19	1	104.00	104	0	3	1	0	1	3	5	8	8	15	3	1	2	4	0	0	0	0	0	0	11	0	1	1	2	1	3	1	3	2	1	2	1	3	1	0	0	0	1	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	3	0	1	0	0	2	0	2	0	1	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTATA.............................................................................................................................................	27	1	99.00	99	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	0	0	0	0	2	0	0	5	1	3	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	15	14	16	0	0	0	0	0	0	10	2	3	8	12
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTCAA................................................................................................................................................	24	1	93.00	93	0	0	1	0	0	0	0	0	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	1	0	2	2	0	4	12	1	8	1	1	0	5	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	5	2	12	9	2	0	0	0	0	0	0	2	0	4	5	6
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTCTT........................................................................................................	21	1	91.00	91	2	0	16	0	0	0	0	0	0	0	0	0	0	0	3	4	0	2	2	4	1	3	2	1	2	1	6	2	6	4	3	7	1	0	0	2	0	1	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	4	3	0	1	0	0	1	0	1	1	0	0	1	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTCCC................................................................................................................................................	24	1	90.00	90	1	0	7	0	0	18	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	1	0	1	0	0	1	1	7	10	5	12	0	5	0	0	0	0	1	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTCAA.............................................................................................................................................	27	1	89.00	89	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	3	2	1	9	9	5	5	2	0	2	14	3	10	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	5	4	4	0	0	0	0	0	0	0	0	0	1	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTCCA..............................................................................................................................................	26	1	86.00	86	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	1	1	0	18	17	5	26	0	1	0	0	0	0	0	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGT.................................................................................................................................................	22	1	86.00	86	0	0	69	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	1	0	0	0	0	0	2	1	1	2	3
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTCAA..............................................................................................................................................	26	1	85.00	85	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	2	6	6	1	9	2	0	0	4	1	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	4	2	6	9	5	0	0	0	0	0	0	1	4	1	1	7
..........................................................................................................................................................GAAGACTAGTGATTTTGTTG..................................................................................................................................................	20	1	84.00	84	1	8	15	0	1	1	2	0	2	6	2	3	3	4	0	0	0	0	0	0	4	0	0	0	1	0	1	1	2	9	0	1	0	2	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	1	0	0	3	0	0	0	7	0	0	0	0	0
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTT........................................................................................................	20	1	82.00	82	0	0	10	0	1	2	3	1	0	0	0	0	0	0	4	0	0	0	2	3	1	2	2	2	2	4	6	1	5	5	1	10	1	1	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	1	1	1	0	0	1	0	0	2	0	1	0	1	0	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAC.............................................................................................................................................	27	1	79.00	79	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	3	1	0	0	0	1	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	13	10	14	0	0	0	0	0	0	8	1	1	7	13
.............................................................................................................................................................GACTAGTGATTTTGTTGT.................................................................................................................................................	18	1	73.00	73	0	0	0	0	2	3	7	3	21	0	8	0	0	0	0	1	0	0	0	0	1	0	0	7	0	0	1	3	0	0	0	0	0	0	0	0	0	0	3	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTT.......................................................................................................................................................	17	1	68.00	68	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	1	0	2	1	0	0	0	6	3	0	0	0	0	0	1	7	11	16	0	0	0	0	0	0	11	1	2	2	1
..........................................................................................................................................................GAAGACTAGTGATTTTGTTGTT................................................................................................................................................	22	1	64.00	64	0	9	11	3	1	1	3	0	2	0	3	0	0	0	0	1	0	0	0	0	1	0	1	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	6	5	3	2	1	7	0	0	0	0	0
...........................................................................................................................................................AAGACTAGTGATTTTGTTGTT................................................................................................................................................	21	1	61.00	61	0	4	1	1	1	2	0	0	3	0	4	0	0	0	0	1	0	0	1	0	1	0	0	1	1	0	0	2	0	0	0	0	0	1	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	1	1	0	0	0	4	7	1	1	4	13	0	0	0	0	0
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTAAA.....................................................................................................	23	1	60.00	60	0	0	5	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	4	6	3	2	2	2	0	4	0	2	1	2	5	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	10	2	0	0	0	0	0	1	0	0	0	0	1	0	0	0
...........................................................................................................................................................AAGACTAGTGATTTTGTTGT.................................................................................................................................................	20	1	58.00	58	0	0	1	0	2	0	3	5	10	2	13	0	0	0	0	0	0	1	0	1	1	0	1	0	1	0	2	0	0	1	0	0	0	2	2	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	2	0	2	0	0	0	0	0	1	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTAG.................................................................................................................................................	23	1	54.00	54	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	1	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	14	5	5	0	0	0	0	0	0	4	1	1	6	10
.............................................................................................................................................................GACTAGTGATTTTGTTGTT................................................................................................................................................	19	1	54.00	54	0	0	2	2	4	6	4	0	5	0	4	0	0	0	1	1	0	0	0	0	1	0	0	3	0	0	1	1	0	0	0	0	0	0	0	0	0	0	3	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTCCC..............................................................................................................................................	26	1	51.00	51	0	0	1	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	11	14	4	7	0	1	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTACA.............................................................................................................................................	27	1	49.00	49	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	4	12	17	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	1	0	0	0	0	0	0	1	0	0	1	1
...........................................................................................................................................................AAGACTAGTGATTTTGTT...................................................................................................................................................	18	1	47.00	47	1	6	0	1	0	1	1	0	7	3	2	0	0	0	2	0	0	1	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	2	4	0	1	3	5	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGC....................................................................................................................................................	20	1	47.00	47	0	0	0	22	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	18	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGG.................................................................................................................................................	23	1	46.00	46	0	1	3	3	0	0	0	0	0	1	2	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	3	0	1	0	0	1	0	5	7	2	0	0	0	0	0	0	3	1	0	4	1
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTATC.....................................................................................................	23	1	46.00	46	0	0	5	3	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	12	2	3	4	0	0	0	0	0	0	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	1	0	0	0	3	2	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTG................................................................................................................................................	24	1	42.00	42	0	0	1	1	0	0	1	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	2	0	0	0	1	0	0	1	1	0	0	0	0	0	0	1	0	1	1	0	0	0	1	1	0	1	0	0	0	0	0	1	3	0	1	1	0	4	3	1	0	0	0	0	0	0	2	0	0	2	4
............................................................................................................................................................AGACTAGTGATTTTGTTGT.................................................................................................................................................	19	1	42.00	42	0	0	2	1	0	1	6	3	6	1	6	0	0	1	1	1	2	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAC..............................................................................................................................................	26	1	42.00	42	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	1	2	1	0	0	0	1	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	5	2	6	0	0	0	0	0	0	1	1	0	7	8
...............................................................................................................................................................CTAGTGATTTTGTTGTTC...............................................................................................................................................	18	1	40.00	40	0	1	0	0	0	5	3	0	0	3	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	3	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	7	3	2	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTAT.............................................................................................................................................	27	1	39.00	39	0	0	1	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	1	0	0	1	2	0	3	2	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	6	2	0	0	0	0	0	0	2	1	2	3	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTCTC.............................................................................................................................................	27	1	39.00	39	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	7	11	2	3	0	0	0	0	0	0	0	2	1	0	0	0	0	1	2	0	0	0	0	4	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTCCT..............................................................................................................................................	26	1	37.00	37	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	7	10	1	14	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTAG...............................................................................................................................................	25	1	37.00	37	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	1	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	4	6	0	0	0	0	0	0	1	3	2	3	2
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTTA.................................................................................................................................................	23	1	37.00	37	0	0	0	0	0	0	0	0	1	0	3	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	1	1	2	3	0	2	1	0	2	1	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	2	5	2	0	0	0	0	0	0	0	0	1	1	2
..........................................................................................................................................................GAAGACTAGTGATTTTGTTGT.................................................................................................................................................	21	1	37.00	37	0	0	6	0	0	0	1	2	6	0	3	0	1	0	0	0	0	0	1	0	0	0	0	1	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	1	0	3	1	0	0	6	0	0	0	0	0
............................................................................................................................................................AGACTAGTGATTTTGTTG..................................................................................................................................................	18	1	35.00	35	0	0	0	0	1	3	1	0	6	0	0	0	1	2	0	1	0	1	0	0	3	0	0	1	0	0	1	0	2	1	2	0	0	2	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0
..........................................................................................................................................................GAAGACTAGTGATTTTGTT...................................................................................................................................................	19	1	35.00	35	2	9	9	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	1	3	0	1	2	1	0	0	0	0	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTTC...............................................................................................................................................	24	1	34.00	34	0	0	19	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	0	0	0	0	0	1	1	0	0	0	3	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTCCA.............................................................................................................................................	27	1	34.00	34	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	6	9	2	6	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTTAA................................................................................................................................................	24	2	33.00	66	0	0	0	0	1	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	0	2	4	1	0	0	1	2	0	3	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	15	15	4	0	0	0	0	0	0	5	0	1	2	2
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTTT.............................................................................................................................................	27	1	33.00	33	0	0	0	1	0	0	0	0	2	0	1	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	1	0	0	3	0	2	1	0	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	2	1	0	0	0	1	1	0	4	0	0	1	0	0	2	0	0	0	0	0	0	1	1	0	0	1
........................................................................................................................................................TGGAAGACTAGTGATTTTGTCA..................................................................................................................................................	22	1	31.00	31	0	0	2	0	0	2	0	0	0	1	0	0	1	1	0	0	0	0	0	0	3	0	0	0	0	0	2	1	1	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	5	1	0	0	0	0	0	0	1	0	2	0	3
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTATA.....................................................................................................	23	1	31.00	31	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	3	1	1	1	0	1	0	0	0	0	1	2	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0	0	2	0	1	3	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTAAT..............................................................................................................................................	26	1	30.00	30	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	2	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	5	3	0	0	0	0	0	0	2	2	0	3	2
..........................................................................................................................................................GAAGACTAGTGATTTTGTTGTTC...............................................................................................................................................	23	1	29.00	29	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	2	1	6	3	8	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTTA.............................................................................................................................................	27	1	28.00	28	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	2	4	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	4	4	3	0	0	0	0	0	0	1	0	0	2	1
.........................................................................................................................................................GGAAGACTAGTGATTTTGT....................................................................................................................................................	19	1	27.00	27	0	0	27	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

TACTCAAGTGCTT--------------------------------TGCAT-----------CATT-----------------AACAAACCTAACCGT-------------------------TCGTC-GTA-----TCGAGTGCTTGCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTCTGCTAA---TAACAATAAATCCCTTGTCTTCTTATGGCTCGCAT-TG-AGCTCTTCATTTCAAATC--TCGTTAACGGTGGTGCCA----------------CAA-CT-----AA---------------------C	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTT................................................................................................................................................	24	1	135582.00	135582	4889	2869	592	1139	125021	1072
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGT.................................................................................................................................................	23	1	28983.00	28983	2143	925	452	795	24278	390
........................................................................................................................................................TGGAAGACTAGTGATTTTGTT...................................................................................................................................................	21	1	18326.00	18326	5914	293	3299	5490	1955	1375
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTC................................................................................................................................................	24	1	12176.00	12176	36	4	1	2	12067	66
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTG..................................................................................................................................................	22	1	11740.00	11740	3187	981	1676	2671	2379	846
........................................................................................................................................................TGGAAGACTAGTGATTTTGT....................................................................................................................................................	20	1	8617.00	8617	2624	259	1541	2286	965	942
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTT...............................................................................................................................................	25	1	7181.00	7181	144	311	37	61	6548	80
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGC.................................................................................................................................................	23	1	4426.00	4426	29	1	1	3	4368	24
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTC...............................................................................................................................................	25	1	1845.00	1845	266	27	11	12	1237	292
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTCTTA.......................................................................................................	22	1	1686.00	1686	103	460	4	13	1093	13
........................................................................................................................................................TGGAAGACTAGTGATTTTG.....................................................................................................................................................	19	1	941.00	941	517	12	137	177	73	25
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTA..................................................................................................................................................	22	1	897.00	897	411	139	44	62	183	58
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTAA.................................................................................................................................................	23	1	862.00	862	489	142	8	12	160	51
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTT..................................................................................................................................................	22	1	676.00	676	96	9	200	213	106	52
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTT................................................................................................................................................	23	1	581.00	581	411	0	0	0	170	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTT...................................................................................................................................................	20	1	528.00	528	526	0	0	0	2	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTA...............................................................................................................................................	25	1	524.00	524	140	55	5	9	293	22
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTAAA................................................................................................................................................	24	1	400.00	400	323	17	1	0	36	23
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTC..................................................................................................................................................	22	1	396.00	396	224	3	13	18	29	109
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTA................................................................................................................................................	24	1	365.00	365	19	2	1	3	337	3
........................................................................................................................................................TGGAAGACTAGTGATTTTGTC...................................................................................................................................................	21	1	360.00	360	55	1	7	14	264	19
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTT..............................................................................................................................................	26	1	349.00	349	8	27	2	2	305	5
........................................................................................................................................................TGGAAGACTAGTGATTTTGTAA..................................................................................................................................................	22	1	294.00	294	173	55	4	5	29	28
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTG..................................................................................................................................................	21	1	279.00	279	276	0	0	0	3	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGC....................................................................................................................................................	20	1	270.00	270	1	0	2	10	255	2
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTA.......................................................................................................	21	1	256.00	256	51	46	2	3	145	9
.........................................................................................................................................................GGAAGACTAGTGATTTTGT....................................................................................................................................................	19	1	230.00	230	229	0	0	0	1	0
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTAT......................................................................................................	22	1	225.00	225	109	23	0	3	77	13
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGT.................................................................................................................................................	22	1	200.00	200	169	0	0	0	31	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAA..............................................................................................................................................	26	1	197.00	197	134	18	0	1	36	8
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAA.............................................................................................................................................	27	1	140.00	140	123	2	0	0	10	5
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTC..............................................................................................................................................	26	1	111.00	111	16	2	0	3	72	18
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTG...............................................................................................................................................	25	1	106.00	106	5	6	1	3	89	2
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGA.................................................................................................................................................	23	1	92.00	92	28	1	13	20	29	1
........................................................................................................................................................TGGAAGACTAGTGATTTTGTAAA.................................................................................................................................................	23	3	88.00	264	212	7	0	0	22	23
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTG................................................................................................................................................	24	1	82.00	82	1	1	2	2	76	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTA...................................................................................................................................................	21	1	81.00	81	34	11	8	7	18	3
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTCTT........................................................................................................	21	1	75.00	75	17	5	2	8	42	1
........................................................................................................................................................TGGAAGACTAGTGATTTT......................................................................................................................................................	18	1	73.00	73	19	0	21	31	2	0
..........................................................................................................................................................GAAGACTAGTGATTTTGTTGTT................................................................................................................................................	22	1	69.00	69	21	0	0	0	47	1
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTT........................................................................................................	20	1	63.00	63	31	5	1	4	21	1
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTAAA..............................................................................................................................................	26	1	62.00	62	52	3	0	0	2	5
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTAA......................................................................................................	22	1	58.00	58	24	13	2	2	14	3
................................................................................................................................GTA-----TCGAGTGCTTGCCGTA........................................................................................................................................................................	19	1	56.00	56	1	17	0	0	38	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTAA...............................................................................................................................................	25	1	50.00	50	23	8	1	3	13	2
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGAC................................................................................................................................................	24	1	46.00	46	1	0	0	0	45	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTAA.................................................................................................................................................	22	1	43.00	43	43	0	0	0	0	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTA..................................................................................................................................................	21	1	42.00	42	42	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTTT.............................................................................................................................................	27	1	33.00	33	1	1	0	0	31	0
..............................................................................................................................C-GTA-----TCGAGTGCTTGCCGTA........................................................................................................................................................................	20	1	32.00	32	0	12	0	1	19	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTA..............................................................................................................................................	26	1	30.00	30	2	0	0	0	26	2
.................................................................................................................................TA-----TCGAGTGCTTGCCGTA........................................................................................................................................................................	18	1	30.00	30	1	14	0	0	15	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTAAA................................................................................................................................................	23	1	29.00	29	29	0	0	0	0	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTTC...............................................................................................................................................	24	1	28.00	28	26	0	0	0	2	0
.............................................................................................................................................................GACTAGTGATTTTGTTGTT................................................................................................................................................	19	1	28.00	28	4	2	1	2	18	1
.........................................................................................................................................................GGAAGACTAGTGATTTTG.....................................................................................................................................................	18	1	27.00	27	27	0	0	0	0	0
............................................................................................................................................................AGACTAGTGATTTTGTTGTT................................................................................................................................................	20	1	25.00	25	8	2	1	3	11	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGA....................................................................................................................................................	20	1	24.00	24	7	0	8	6	2	1
..........................................................................................................................................................GAAGACTAGTGATTTTGTT...................................................................................................................................................	19	1	23.00	23	14	0	0	2	5	2
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAT..............................................................................................................................................	26	1	23.00	23	3	3	0	0	16	1
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTC................................................................................................................................................	23	1	22.00	22	1	0	0	0	21	0
..........................................................................................................................................................GAAGACTAGTGATTTTGTTG..................................................................................................................................................	20	1	22.00	22	18	0	0	0	1	3
...........................................................................................................................................................AAGACTAGTGATTTTGTTGTT................................................................................................................................................	21	1	21.00	21	3	0	1	1	16	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGG.................................................................................................................................................	23	1	21.00	21	1	0	0	0	20	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTTT...............................................................................................................................................	24	1	20.00	20	11	0	0	0	9	0

droWil2

TCT----TA----CCAACTGCTAACTAAC--TC-----TTAACTCTCTAA---------------------------------CTTAAC-----T-CTGGGTTAACAAAATAAAATCAAAAATTGTG-T-GTGG-T-GGAATGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTAATAAAATTAACAATAAATCCCTTGTCTTCTTATGGCGTGTATTTAAAGCTCTTCATTT----------------GTTG-T----------------T--------------------------------------	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTG..................................................................................................................................................	22	1	22820.00	22820	56	2521	885	7006	12352
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTT................................................................................................................................................	24	1	22073.00	22073	53	2219	412	16233	3156
........................................................................................................................................................TGGAAGACTAGTGATTTTGTT...................................................................................................................................................	21	1	12162.00	12162	73	1114	606	1690	8679
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGT.................................................................................................................................................	23	1	7314.00	7314	28	900	222	3487	2677
........................................................................................................................................................TGGAAGACTAGTGATTTTGT....................................................................................................................................................	20	1	5436.00	5436	36	265	224	266	4645
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTCTTA.......................................................................................................	22	1	3332.00	3332	6	12	1	3017	296
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTT...............................................................................................................................................	25	1	1155.00	1155	3	74	38	813	227
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTA..................................................................................................................................................	22	1	572.00	572	0	57	21	280	214
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTT..................................................................................................................................................	22	1	364.00	364	4	19	35	38	268
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTA...............................................................................................................................................	25	1	359.00	359	0	59	4	261	35
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTAA.................................................................................................................................................	23	1	350.00	350	0	66	3	265	16
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTG..................................................................................................................................................	21	1	225.00	225	6	216	0	1	2
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAA..............................................................................................................................................	26	1	206.00	206	0	45	1	158	2
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTT................................................................................................................................................	23	1	188.00	188	2	186	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTG.....................................................................................................................................................	19	1	128.00	128	3	36	16	5	68
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGA.................................................................................................................................................	23	1	116.00	116	0	23	4	56	33
.........................................................................................................................................................GGAAGACTAGTGATTTTGTT...................................................................................................................................................	20	1	103.00	103	4	97	0	0	2
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTCTT........................................................................................................	21	1	93.00	93	0	9	0	44	40
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAA.............................................................................................................................................	27	1	90.00	90	0	34	0	56	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGT.................................................................................................................................................	22	1	83.00	83	0	82	0	1	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTAAA................................................................................................................................................	24	1	83.00	83	0	20	1	61	1
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTC...............................................................................................................................................	25	1	68.00	68	0	9	6	27	26
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTAA...............................................................................................................................................	25	1	65.00	65	0	15	0	50	0
..........................................................................................................................................................GAAGACTAGTGATTTTGTTG..................................................................................................................................................	20	1	62.00	62	30	12	2	7	11
..........................................................................................................................................................GAAGACTAGTGATTTTGTTGTT................................................................................................................................................	22	1	58.00	58	29	14	0	14	1
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTC..................................................................................................................................................	22	1	55.00	55	0	10	25	1	19
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTAAA..............................................................................................................................................	26	1	49.00	49	0	21	0	28	0
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTA.......................................................................................................	21	1	47.00	47	0	2	0	40	5
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTT..............................................................................................................................................	26	1	41.00	41	0	2	0	31	8
..........................................................................................................................................................GAAGACTAGTGATTTTGTT...................................................................................................................................................	19	1	40.00	40	25	7	0	0	8
...........................................................................................................................................................AAGACTAGTGATTTTGTTGTT................................................................................................................................................	21	1	37.00	37	9	2	0	24	2
............................................................................................................................................................AGACTAGTGATTTTGTTGTT................................................................................................................................................	20	1	33.00	33	3	3	0	27	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTA................................................................................................................................................	24	1	33.00	33	0	5	0	25	3
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTAT......................................................................................................	22	1	31.00	31	0	3	0	21	7
.........................................................................................................................................................GGAAGACTAGTGATTTTGT....................................................................................................................................................	19	1	28.00	28	2	25	0	0	1
...................................................................................................................................TGG-T-GGAATGCATTCCGTA........................................................................................................................................................................	19	1	27.00	27	0	0	0	27	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTA...................................................................................................................................................	21	1	27.00	27	0	0	0	5	22
........................................................................................................................................................TGGAAGACTAGTGATTTT......................................................................................................................................................	18	1	27.00	27	0	6	0	3	18
..........................................................................................................................................................GAAGACTAGTGATTTTGTTGT.................................................................................................................................................	21	1	26.00	26	16	3	0	5	2
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTC................................................................................................................................................	24	1	25.00	25	1	4	2	16	2
................................................................................................................................................................................TGGTCTTTAATAAAATTAA.............................................................................................................................	19	1	21.00	21	0	0	0	20	1
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTAA......................................................................................................	22	1	19.00	19	0	0	0	15	4
..................................................................................................................................GTGG-T-GGAATGCATTCCGTA........................................................................................................................................................................	20	1	19.00	19	0	0	0	19	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTG...............................................................................................................................................	25	1	18.00	18	0	0	1	16	1
...........................................................................................................................................................AAGACTAGTGATTTTGTT...................................................................................................................................................	18	1	17.00	17	15	1	0	0	1
........................................................................................................................................................TGGAAGACTAGTGATTTTGA....................................................................................................................................................	20	1	16.00	16	0	1	1	0	14
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTCT.........................................................................................................	20	1	15.00	15	5	1	0	1	8
..........................................................................................................................................................GAAGACTAGTGATTTTGT....................................................................................................................................................	18	1	14.00	14	11	1	0	1	1
..............................................................................................................................................................ACTAGTGATTTTGTTGTT................................................................................................................................................	18	1	13.00	13	2	2	0	8	1
........................................................................................................................................................TGGAAGACTAGTGATTTTGTC...................................................................................................................................................	21	1	13.00	13	0	0	1	3	9
...........................................................................................................................................................AAGACTAGTGATTTTGTTG..................................................................................................................................................	19	1	13.00	13	6	1	0	1	5
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGAAA...............................................................................................................................................	25	1	11.00	11	0	7	0	4	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGAA................................................................................................................................................	24	1	10.00	10	0	3	1	6	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGC....................................................................................................................................................	20	1	10.00	10	3	1	0	0	6
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGC.................................................................................................................................................	23	1	10.00	10	1	1	0	4	4
............................................................................................................................................................AGACTAGTGATTTTGTTG..................................................................................................................................................	18	1	9.00	9	1	1	0	2	5
........................................................................................................................................................TGGAAGACTAGTGATTTTGTAA..................................................................................................................................................	22	1	8.00	8	0	1	0	6	1
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTTT...............................................................................................................................................	24	1	7.00	7	0	6	0	1	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAT..............................................................................................................................................	26	1	7.00	7	0	1	0	6	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAT.............................................................................................................................................	27	1	7.00	7	0	0	0	7	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTA..............................................................................................................................................	26	1	7.00	7	0	1	0	6	0
............................................................................................................................................................AGACTAGTGATTTTGTTGT.................................................................................................................................................	19	1	7.00	7	1	0	0	4	2
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTCC..............................................................................................................................................	26	1	6.00	6	0	2	1	0	3
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTCC.................................................................................................................................................	23	1	6.00	6	0	4	2	0	0
.............................................................................................................................................................GACTAGTGATTTTGTTGTT................................................................................................................................................	19	1	6.00	6	0	0	0	5	1
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTTA...............................................................................................................................................	24	1	5.00	5	0	4	0	1	0
........................................................................................................................................................TGGAAGACTAGTGATTTTA.....................................................................................................................................................	19	1	5.00	5	0	0	1	0	4
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGG.................................................................................................................................................	23	1	5.00	5	0	1	0	2	2
.....................................................................................................................................................................................................ATAAATCCCTTGTCTTCTTA.......................................................................................................	20	1	5.00	5	0	0	0	5	0

dp5

C------GC------------AAAT-------CAAATCG---C--TCCATCCA-AAC-------T-----------------AACTAAC-----CGA-------------------------TTGGC-CTCTCC-TGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTCTGCTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATCTG-TGCTCTTCATTC-------T-----ATCGATGGT----------------TAACCAAATT-----AAACGGAACTCGACATTCAAAAAA	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTT................................................................................................................................................	24	1	31339.00	31339	0	6181	17652	1147	1031	849	357	144	248	3730
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTG..................................................................................................................................................	22	1	29649.00	29649	0	17587	1065	645	920	4353	938	187	1270	2684
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGT.................................................................................................................................................	23	1	16631.00	16631	0	8400	4110	611	587	625	296	225	208	1569
........................................................................................................................................................TGGAAGACTAGTGATTTTGTT...................................................................................................................................................	21	1	8250.00	8250	0	3360	551	1301	177	1937	363	39	106	416
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTC................................................................................................................................................	24	1	2509.00	2509	0	3	2354	135	1	2	2	0	12	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGT....................................................................................................................................................	20	1	2087.00	2087	0	793	89	280	24	425	144	15	61	256
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTG..................................................................................................................................................	21	1	1531.00	1531	0	1519	0	1	0	0	0	0	8	3
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTCTTA.......................................................................................................	22	1	1363.00	1363	0	31	530	17	768	5	2	0	3	7
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGC.................................................................................................................................................	23	1	1018.00	1018	0	6	847	156	2	6	0	0	1	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTT...............................................................................................................................................	25	1	761.00	761	0	187	352	35	40	21	25	2	22	77
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGT.................................................................................................................................................	22	1	721.00	721	0	717	0	0	0	1	0	0	0	3
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTT................................................................................................................................................	23	1	542.00	542	0	522	12	2	0	0	0	0	1	5
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTA..................................................................................................................................................	22	1	495.00	495	0	356	20	4	30	17	22	15	22	9
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTT..................................................................................................................................................	22	1	382.00	382	0	147	14	59	10	76	37	0	27	12
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTA...............................................................................................................................................	25	1	380.00	380	0	238	77	2	25	7	3	11	4	13
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTAA.................................................................................................................................................	23	1	352.00	352	0	316	2	0	13	3	5	6	7	0
........................................................................................................................................................TGGAAGACTAGTGATTTTG.....................................................................................................................................................	19	1	319.00	319	0	205	7	18	1	32	8	3	36	9
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGA.................................................................................................................................................	23	1	306.00	306	0	221	4	6	4	15	8	2	40	6
.........................................................................................................................................................GGAAGACTAGTGATTTTGTT...................................................................................................................................................	20	1	298.00	298	0	297	0	0	0	0	0	0	0	1
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAA..............................................................................................................................................	26	1	278.00	278	0	234	9	0	12	0	3	15	0	5
........................................................................................................................................................TGGAAGACTAGTGATTTTGTC...................................................................................................................................................	21	1	256.00	256	0	0	94	157	1	2	0	0	2	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTA................................................................................................................................................	24	1	195.00	195	0	64	106	15	3	0	2	0	3	2
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTC..................................................................................................................................................	22	1	166.00	166	0	7	11	11	0	4	6	0	127	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTAA...............................................................................................................................................	25	1	163.00	163	0	158	0	0	2	0	0	2	1	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAA.............................................................................................................................................	27	1	158.00	158	0	153	2	0	1	0	1	0	1	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTAAA................................................................................................................................................	24	1	144.00	144	0	134	0	0	3	0	4	2	1	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTAAA..............................................................................................................................................	26	1	120.00	120	0	110	1	0	1	0	2	6	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTC...............................................................................................................................................	25	1	97.00	97	0	9	59	3	1	0	10	0	15	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGC....................................................................................................................................................	20	1	96.00	96	0	1	27	67	0	1	0	0	0	0
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTA.......................................................................................................	21	1	88.00	88	0	17	31	1	36	0	0	0	2	1
...............................................................................................................................................................CTAGTGATTTTGTTGTT................................................................................................................................................	17	2	79.00	158	0	0	0	0	0	0	0	1	5	152
..........................................................................................................................................................GAAGACTAGTGATTTTGTTG..................................................................................................................................................	20	1	78.00	78	0	77	0	1	0	0	0	0	0	0
...............................................................................................................................................................CTAGTGATTTTGTTG..................................................................................................................................................	15	2	71.50	143	0	0	0	0	0	0	0	2	18	123
.........................................................................................................................................................GGAAGACTAGTGATTTTGT....................................................................................................................................................	19	1	71.00	71	0	69	0	0	0	0	0	0	0	2
..............................................................................................................................................................ACTAGTGATTTTGTTGTT................................................................................................................................................	18	2	70.50	141	0	2	0	0	0	0	0	1	4	134
..............................................................................................................................................................ACTAGTGATTTTGTTG..................................................................................................................................................	16	2	53.50	107	0	0	0	0	0	0	0	3	12	92
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTCTT........................................................................................................	21	1	47.00	47	0	18	16	7	6	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGAA................................................................................................................................................	24	1	46.00	46	0	34	0	0	0	0	0	1	11	0
..........................................................................................................................................................GAAGACTAGTGATTTTGTTGT.................................................................................................................................................	21	1	39.00	39	0	37	2	0	0	0	0	0	0	0
...............................................................................................................................................................CTAGTGATTTTGTTGT.................................................................................................................................................	16	2	36.00	72	0	0	0	0	0	0	0	1	3	68
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTG................................................................................................................................................	24	1	33.00	33	0	8	24	0	0	1	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGAC................................................................................................................................................	24	1	30.00	30	0	0	27	3	0	0	0	0	0	0
..............................................................................................................................................................ACTAGTGATTTTGTTGT.................................................................................................................................................	17	2	29.00	58	0	0	0	0	0	0	0	1	4	53
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTAA......................................................................................................	22	1	29.00	29	0	9	3	1	8	0	1	0	6	1
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTAT......................................................................................................	22	1	27.00	27	0	13	6	0	5	1	1	0	1	0
........................................................................................................................................................TGGAAGACTAGTGATTTT......................................................................................................................................................	18	1	27.00	27	0	12	0	1	0	10	0	1	1	2
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTA..................................................................................................................................................	21	1	26.00	26	0	26	0	0	0	0	0	0	0	0
............................................................................................................................................................AGACTAGTGATTTTGTTG..................................................................................................................................................	18	2	25.00	50	0	11	0	0	0	0	0	0	9	30
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTT..............................................................................................................................................	26	1	24.00	24	0	6	12	1	0	0	1	0	1	3
..........................................................................................................................................................GAAGACTAGTGATTTTGTTGTT................................................................................................................................................	22	1	24.00	24	0	23	1	0	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGG.................................................................................................................................................	23	1	23.00	23	0	14	5	2	1	1	0	0	0	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTTA...............................................................................................................................................	24	1	22.00	22	0	22	0	0	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGAAA...............................................................................................................................................	25	2	20.50	41	0	39	0	0	0	0	0	1	1	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTT..................................................................................................................................................	21	1	20.00	20	0	20	0	0	0	0	0	0	0	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTTAA..............................................................................................................................................	25	1	20.00	20	0	20	0	0	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTCA.................................................................................................................................................	23	1	19.00	19	0	0	0	0	0	0	1	0	18	0
.......................................................................................................................................................ATGGAAGACTAGTGATTTTGTTG..................................................................................................................................................	23	1	18.00	18	0	14	0	0	0	0	0	0	3	1
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGA.................................................................................................................................................	22	1	18.00	18	0	18	0	0	0	0	0	0	0	0
.........................................................................................................................................................GGAAGACTAGTGATTTTG.....................................................................................................................................................	18	1	17.00	17	0	17	0	0	0	0	0	0	0	0
............................................................................................................................................................AGACTAGTGATTTTGTTGTT................................................................................................................................................	20	2	16.50	33	0	1	0	0	0	0	0	0	1	31
........................................................................................................................................................TGGAAGACTAGTGATTTTGA....................................................................................................................................................	20	1	16.00	16	0	1	0	0	0	1	1	0	12	1
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTAA...............................................................................................................................................	24	1	16.00	16	0	16	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTT........................................................................................................	20	1	16.00	16	0	10	2	0	4	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTCC.................................................................................................................................................	23	1	15.00	15	0	2	0	1	0	0	1	0	11	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTTT...............................................................................................................................................	24	1	15.00	15	0	15	0	0	0	0	0	0	0	0
..........................................................................................................................................................GAAGACTAGTGATTTTGTT...................................................................................................................................................	19	1	15.00	15	0	14	0	1	0	0	0	0	0	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTAA.................................................................................................................................................	22	1	14.00	14	0	14	0	0	0	0	0	0	0	0
...........................................................................................................................................................AAGACTAGTGATTTTGTTG..................................................................................................................................................	19	1	14.00	14	0	10	0	0	0	2	0	0	0	2
.............................................................................................................................................................GACTAGTGATTTTGTTG..................................................................................................................................................	17	2	13.00	26	0	0	0	0	0	0	0	0	3	23
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTCT.........................................................................................................	20	1	13.00	13	0	4	6	2	0	1	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTA...................................................................................................................................................	21	1	12.00	12	0	3	1	4	1	2	1	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTG...............................................................................................................................................	25	1	10.00	10	0	6	2	1	0	1	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATT........................................................................................................................................................	16	1	9.00	9	0	0	0	0	0	0	0	4	1	4
.......................................................................................................................................................ATGGAAGACTAGTGATTTTGTTGTT................................................................................................................................................	25	1	9.00	9	0	4	0	0	0	0	0	4	1	0
..........................................................................................................................................................GAAGACTAGTGATTTTGT....................................................................................................................................................	18	1	8.00	8	0	8	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTCTTT.......................................................................................................	22	1	8.00	8	0	0	3	1	4	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTCC...............................................................................................................................................	25	1	8.00	8	0	1	0	0	0	0	4	0	3	0
...........................................................................................................................................................AAGACTAGTGATTTTGTTGTT................................................................................................................................................	21	1	8.00	8	0	3	3	0	0	0	0	0	1	1
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAT..............................................................................................................................................	26	1	7.00	7	0	5	2	0	0	0	0	0	0	0
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTAC......................................................................................................	22	1	7.00	7	0	0	6	1	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGCC................................................................................................................................................	24	1	7.00	7	0	0	7	0	0	0	0	0	0	0
.....................................................................................................................................................................................................ATAAATCCCTTGTCTTCTTA.......................................................................................................	20	1	7.00	7	0	4	2	1	0	0	0	0	0	0
............................................................................................................................................................AGACTAGTGATTTTGTTGT.................................................................................................................................................	19	2	7.00	14	0	2	0	0	0	0	0	1	0	11
........................................................................................................................................................TGGAAGACTAGTGATTTTGTAAA.................................................................................................................................................	23	1	7.00	7	0	6	0	0	0	0	1	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGGC................................................................................................................................................	24	1	7.00	7	0	1	6	0	0	0	0	0	0	0
.............................................................................................................................................................GACTAGTGATTTTGTTGT.................................................................................................................................................	18	2	6.50	13	0	4	0	0	1	0	0	0	1	7
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTAAA.....................................................................................................	23	1	6.00	6	0	3	0	0	1	0	0	0	2	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGAA................................................................................................................................................	23	1	6.00	6	0	6	0	0	0	0	0	0	0	0

droPer2

C------GC------------AAAT-------CAAATCG---C--TCCATCCA-AAC-------T-----------------AACTAAC-----CGA-------------------------TTGGC-CTCTCC-TGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTCTGCTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATCTG-TGCTCTTCATTC-------T-----ATCGATGGT----------------TAACCAAATT-----AAACGGAACTCGACATTC--AACA	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTG..................................................................................................................................................	22	1	15885.00	15885	0	3441	292	4788	3628	3736
........................................................................................................................................................TGGAAGACTAGTGATTTTGTT...................................................................................................................................................	21	1	5545.00	5545	1	547	53	1870	2147	927
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGT.................................................................................................................................................	23	1	4812.00	4812	3	1816	189	668	689	1447
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTT................................................................................................................................................	24	1	3828.00	3828	6	881	275	896	877	893
........................................................................................................................................................TGGAAGACTAGTGATTTTGT....................................................................................................................................................	20	1	1329.00	1329	2	90	13	379	471	374
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTG..................................................................................................................................................	21	1	309.00	309	0	309	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTT..................................................................................................................................................	22	1	196.00	196	0	16	3	50	79	48
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTA..................................................................................................................................................	22	1	176.00	176	0	101	13	12	27	23
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGT.................................................................................................................................................	22	1	161.00	161	0	161	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTT...............................................................................................................................................	25	1	155.00	155	3	31	9	16	32	64
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTCTTA.......................................................................................................	22	1	124.00	124	3	3	106	9	3	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAA..............................................................................................................................................	26	1	121.00	121	0	114	3	0	0	4
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGA.................................................................................................................................................	23	1	116.00	116	0	58	2	13	21	22
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTA...............................................................................................................................................	25	1	111.00	111	1	83	11	3	4	9
........................................................................................................................................................TGGAAGACTAGTGATTTTG.....................................................................................................................................................	19	1	96.00	96	0	15	0	31	38	12
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTT................................................................................................................................................	23	1	82.00	82	0	81	0	1	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTAA.................................................................................................................................................	23	1	79.00	79	0	63	6	2	2	6
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTAA...............................................................................................................................................	25	1	63.00	63	0	58	0	1	1	3
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTC..................................................................................................................................................	22	1	58.00	58	0	4	0	9	12	33
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAA.............................................................................................................................................	27	1	54.00	54	0	52	1	0	0	1
.........................................................................................................................................................GGAAGACTAGTGATTTTGTT...................................................................................................................................................	20	1	53.00	53	0	53	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTC...............................................................................................................................................	25	1	43.00	43	0	0	3	1	0	39
..........................................................................................................................................................GAAGACTAGTGATTTTGTTG..................................................................................................................................................	20	1	36.00	36	3	19	0	4	1	9
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTA................................................................................................................................................	24	1	31.00	31	0	25	2	1	1	2
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTAAA..............................................................................................................................................	26	2	26.00	52	0	48	3	0	0	1
........................................................................................................................................................TGGAAGACTAGTGATTTT......................................................................................................................................................	18	1	23.00	23	0	6	0	7	10	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTAAA................................................................................................................................................	24	1	22.00	22	0	22	0	0	0	0
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTCTT........................................................................................................	21	1	20.00	20	0	3	2	4	11	0
..........................................................................................................................................................GAAGACTAGTGATTTTGTTGT.................................................................................................................................................	21	1	17.00	17	1	11	0	3	0	2
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGC.................................................................................................................................................	23	1	14.00	14	0	1	0	5	4	4
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGAA................................................................................................................................................	24	1	13.00	13	0	6	0	0	1	6
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTAA.................................................................................................................................................	22	1	11.00	11	0	11	0	0	0	0
..........................................................................................................................................................GAAGACTAGTGATTTTGTTGTT................................................................................................................................................	22	1	11.00	11	6	3	0	0	1	1
..........................................................................................................................................................GAAGACTAGTGATTTTGTT...................................................................................................................................................	19	1	10.00	10	0	3	0	2	0	5
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTA.......................................................................................................	21	1	10.00	10	1	4	5	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTT..............................................................................................................................................	26	1	10.00	10	0	0	0	1	1	8
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTA..................................................................................................................................................	21	1	9.00	9	0	9	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGG.................................................................................................................................................	23	1	8.00	8	1	6	1	0	0	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTTAA..............................................................................................................................................	25	1	8.00	8	0	8	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTC...................................................................................................................................................	21	1	8.00	8	0	0	0	1	6	1
........................................................................................................................................................TGGAAGACTAGTGATTTTGTA...................................................................................................................................................	21	1	7.00	7	0	0	0	1	5	1
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGA.................................................................................................................................................	22	1	7.00	7	0	7	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGC....................................................................................................................................................	20	1	7.00	7	0	0	0	2	5	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTTA...............................................................................................................................................	24	1	7.00	7	0	7	0	0	0	0
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTAA......................................................................................................	22	1	7.00	7	0	4	0	0	2	1
...........................................................................................................................................................AAGACTAGTGATTTTGTTG..................................................................................................................................................	19	1	6.00	6	0	3	0	0	3	0
..........................................................................................................................................................GAAGACTAGTGATTTTGT....................................................................................................................................................	18	1	6.00	6	4	1	0	1	0	0
...........................................................................................................................................................AAGACTAGTGATTTTGTTGT.................................................................................................................................................	20	1	6.00	6	0	1	0	1	4	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTC................................................................................................................................................	24	1	5.00	5	0	0	0	2	0	3
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTCC.................................................................................................................................................	23	1	5.00	5	0	0	0	0	0	5
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTCA.................................................................................................................................................	23	1	5.00	5	0	0	0	0	0	5
.............................................................................................................................................................GACTAGTGATTTTGTTGTT................................................................................................................................................	19	2	4.00	8	0	1	2	1	4	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTTC.................................................................................................................................................	23	1	4.00	4	0	0	0	2	0	2
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTG...............................................................................................................................................	25	1	4.00	4	0	3	0	0	1	0
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTAT......................................................................................................	22	1	4.00	4	0	3	1	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTCC..................................................................................................................................................	22	1	4.00	4	0	0	0	1	1	2
........................................................................................................................................................TGGAAGACTAGTGATTTTGTAA..................................................................................................................................................	22	1	4.00	4	0	2	0	1	0	1
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTT..................................................................................................................................................	21	1	3.00	3	0	3	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTC..............................................................................................................................................	26	1	3.00	3	0	0	0	0	0	3
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTG................................................................................................................................................	24	1	3.00	3	0	3	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAT..............................................................................................................................................	26	1	3.00	3	0	2	0	0	1	0

droAna3

CAT----T-------------------------------------------TG-AA-TTAAAACC-----------------AACTAAC-----C----------------------------TGGGAGTCCTG-TGGAAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTTTATGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTCG--GCTCATCACTC-------T-----ATC-------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTG..................................................................................................................................................	22	1	17639.00	17639	2080	1329	231	2434	1416	10149
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTT................................................................................................................................................	24	1	15179.00	15179	2968	7295	143	823	1035	2915
........................................................................................................................................................TGGAAGACTAGTGATTTTGTT...................................................................................................................................................	21	1	12759.00	12759	1251	410	30	2327	1001	7740
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGT.................................................................................................................................................	23	1	10715.00	10715	1306	5336	136	636	653	2648
........................................................................................................................................................TGGAAGACTAGTGATTTTGT....................................................................................................................................................	20	1	6433.00	6433	389	135	22	774	711	4402
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTT..................................................................................................................................................	22	1	1289.00	1289	99	12	29	162	160	827
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTT...............................................................................................................................................	25	1	1259.00	1259	283	440	10	41	189	296
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGC.................................................................................................................................................	23	1	1177.00	1177	3	1167	1	2	0	4
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTC................................................................................................................................................	24	1	909.00	909	9	881	1	3	9	6
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTA...............................................................................................................................................	25	1	624.00	624	63	502	34	3	6	16
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAA..............................................................................................................................................	26	1	568.00	568	45	497	21	0	0	5
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTA..................................................................................................................................................	22	1	339.00	339	24	100	34	24	15	142
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTT................................................................................................................................................	23	1	267.00	267	251	15	0	0	0	1
........................................................................................................................................................TGGAAGACTAGTGATTTTG.....................................................................................................................................................	19	1	260.00	260	64	6	0	63	32	95
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTCTTA.......................................................................................................	22	1	215.00	215	37	59	31	6	2	80
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAA.............................................................................................................................................	27	1	199.00	199	29	165	5	0	0	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTG..................................................................................................................................................	21	1	186.00	186	182	3	0	0	0	1
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGA.................................................................................................................................................	23	1	155.00	155	15	41	3	18	11	67
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTAA.................................................................................................................................................	23	1	151.00	151	15	78	30	4	3	21
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTT..............................................................................................................................................	26	1	144.00	144	32	25	0	6	45	36
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTC...............................................................................................................................................	25	1	136.00	136	39	55	0	1	19	22
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGT.................................................................................................................................................	22	1	125.00	125	114	9	0	0	0	2
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTAA...............................................................................................................................................	25	1	124.00	124	9	110	5	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTA................................................................................................................................................	24	1	120.00	120	8	96	6	1	3	6
.........................................................................................................................................................GGAAGACTAGTGATTTTGTT...................................................................................................................................................	20	1	107.00	107	105	1	0	1	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTC...................................................................................................................................................	21	1	92.00	92	0	63	0	5	4	20
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAT..............................................................................................................................................	26	1	84.00	84	3	78	2	0	1	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTA...................................................................................................................................................	21	1	66.00	66	1	0	1	2	6	56
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTAAA..............................................................................................................................................	26	1	60.00	60	13	44	3	0	0	0
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTA.......................................................................................................	21	1	57.00	57	25	5	1	5	4	17
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTCTT........................................................................................................	21	1	45.00	45	17	10	1	1	0	16
........................................................................................................................................................TGGAAGACTAGTGATTTT......................................................................................................................................................	18	1	44.00	44	6	3	0	14	0	21
........................................................................................................................................................TGGAAGACTAGTGATTTTGC....................................................................................................................................................	20	1	38.00	38	0	32	0	3	0	3
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTTT...............................................................................................................................................	24	1	35.00	35	35	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTG...............................................................................................................................................	25	1	34.00	34	5	16	1	1	0	11
........................................................................................................................................................TGGAAGACTAGTGATTTTGTG...................................................................................................................................................	21	1	31.00	31	0	2	0	3	7	19
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAC..............................................................................................................................................	26	1	31.00	31	2	27	0	0	2	0
..........................................................................................................................................................GAAGACTAGTGATTTTGTTG..................................................................................................................................................	20	1	30.00	30	17	0	0	0	2	11
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAT.............................................................................................................................................	27	1	30.00	30	0	29	0	0	0	1
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTC..................................................................................................................................................	22	1	29.00	29	3	3	1	9	3	10
..........................................................................................................................................................GAAGACTAGTGATTTTGTTGTT................................................................................................................................................	22	1	25.00	25	19	2	0	0	2	2
.........................................................................................................................................................GGAAGACTAGTGATTTTGT....................................................................................................................................................	19	1	25.00	25	23	0	0	0	1	1
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTT........................................................................................................	20	1	21.00	21	8	4	1	2	2	4
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTG................................................................................................................................................	24	1	21.00	21	10	5	0	2	3	1
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTAAA................................................................................................................................................	24	1	20.00	20	3	13	3	0	0	1
..........................................................................................................................................................GAAGACTAGTGATTTTGTTGT.................................................................................................................................................	21	1	18.00	18	6	0	0	0	3	9
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAC.............................................................................................................................................	27	1	18.00	18	1	17	0	0	0	0
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTAA......................................................................................................	22	1	17.00	17	3	2	2	0	2	8
..........................................................................................................................................................GAAGACTAGTGATTTTGTT...................................................................................................................................................	19	1	16.00	16	5	0	0	0	0	11
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTA..............................................................................................................................................	26	1	15.00	15	4	7	1	0	2	1
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGG.................................................................................................................................................	23	1	14.00	14	2	8	0	1	0	3
........................................................................................................................................................TGGAAGACTAGTGATTTTGTAA..................................................................................................................................................	22	1	14.00	14	0	2	0	2	3	7
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTC..............................................................................................................................................	26	1	12.00	12	3	3	0	1	4	1
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGAA................................................................................................................................................	24	1	12.00	12	2	4	1	1	0	4
..........................................................................................................................................................GAAGACTAGTGATTTTGT....................................................................................................................................................	18	1	12.00	12	2	0	0	0	0	10
...........................................................................................................................................................AAGACTAGTGATTTTGTTGT.................................................................................................................................................	20	1	11.00	11	1	2	1	4	0	3
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTAT......................................................................................................	22	1	10.00	10	5	1	2	0	0	2
........................................................................................................................................................TGGAAGACTAGTGATTTTGTAT..................................................................................................................................................	22	1	9.00	9	0	0	1	0	2	6
.....................................................................................................................................................................................................ATAAATCCCTTGTCTTCTTA.......................................................................................................	20	1	9.00	9	4	1	0	1	0	3
...........................................................................................................................................................AAGACTAGTGATTTTGTTGTT................................................................................................................................................	21	1	9.00	9	5	2	0	2	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGAC................................................................................................................................................	24	1	9.00	9	0	8	0	0	1	0
.............................................................................................................................................................GACTAGTGATTTTGTTGT.................................................................................................................................................	18	1	9.00	9	0	0	0	4	0	5
........................................................................................................................................................TGGAAGACTAGTGATTTTGA....................................................................................................................................................	20	1	9.00	9	0	0	0	5	0	4
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTTA...............................................................................................................................................	24	1	8.00	8	7	1	0	0	0	0

droBip1

TCT----GG------------AAAC-------GGTGTCT---C--TGCATCTG-GAT--GTAACC-----------------AACTAAC-----CGA-------------------------T---------CC-TGGGAGTGCTCTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCACTTG--GCTCATCACT------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droKik1

TC---------------------------CATC-----GTAAC--TCCATCCA-G----------------------------ACTAAC-----CGA-------------------------TTGGG-T-CTCCTTGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCACCTG-TGCTCTTCATTC-------T-----ATCGAT----------------------------T-----AA---------------------A	Size	Hit Count	Total Norm	Total
No Reads

droFic1

------------------------------ATC-----GTAACTCTCCATCAA-AACTCGACAAT-----------------AACTAACT---CCGA-------------------------TTGGC-T-CTCC-TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAT---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------T-----ATCGATGGT----------------TAAT-AA-TAACAC----------------------ACA	Size	Hit Count	Total Norm	Total
No Reads

droEle1

----------------------------------------AAC--TC-------AACTCAACAGT-----------------AACTAACCAAACCG----------------------GGGATTGGC-T-CTCC-TGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------T-----GTCGAAGGT----------------TAACCAA-TTAAACTA-----------------------	Size	Hit Count	Total Norm	Total
No Reads

droRho1

T----------------------------GATC-----GTAAC--TCCATCCA-AACTCAATAAT-----------------AACTAAC-----CGA-------------------------TTGGC-T-CTCC-TGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCATCATTC-------T-----ATCGAAGGT----------------TAACCAA-TTAA---------------------------	Size	Hit Count	Total Norm	Total
No Reads

droBia1

------------------------------ATC-----GTAACTCTCCATCCA-AACTCAACAAT-----------------AACTAAC-----CGA-------------------------TTGGC-C-CTCC-TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGATCTTCATTC-------T-----ATCGATGGT----------------TAACC-A-TAAAACTA--------------------AAC	Size	Hit Count	Total Norm	Total
No Reads

droTak1

T----------------------------GATC-----GTAAC--TCCATCCA-AACTCAACAAT-----------------AACTAAC-----CGA-------------------------TTGGC-T-CTCC-TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------C-----ATCGATGGT----------------TAAC-------AACTAC-------TGG----C--TAATA	Size	Hit Count	Total Norm	Total
No Reads

droEug1

T----------------------------GATCTA---GTAAC--TCCATCCAAAACTCAACAAT-----------------AACTAAC-----CGA-------------------------TTGGC-T-CTCC-TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCACCTG-TGCTCTGCATTC-------T-----AACGATGGT----------------TAACCAA-TAAGACTA-----------------------	Size	Hit Count	Total Norm	Total
No Reads

dm3

TAT----GTGCTT----------------GATC-----GTAAC--TCCATCCA-AACTCGATATT-----------------AACTAAC-----CGA-------------------------TTGGT-C-CTCC-TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------T-----ATCGATGGT----------------TAACCAA-TAAAACTA-----------------------	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTG..................................................................................................................................................	22	1	730460.00	730460	1	0	1	0	180	9	23	54	38	34	8	70	8	2	625	10	2	71	7	0	369	282	201	786	0	36	35	30	180	237	7169	7180	100	95	375	499	344	921	547	507	89	427	554	373	476	544	148	501	1213	577	525	536	306	7	35	0	1118	1525	1027	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	21	18	7	8	186	609	56	682	487	358	18	19	64	99	206	948	41	623	1004	184	543	28	19	377	289	3794	50	14	61	196	69	111	59	55	738	266	119	23	459	804	5044	13409	62	5339	43	4853	5258	26728	398	3446	408	6202	3305	0	0	0	1	39	40	0	0	0	0	249	1387	1389	2122	1386	574	611	647	758	431	629	426	741	764	403	0	0	0	0	0	14	0	8	90	10	0	10036	14584	0	10409	48	36	6591	8898	280	8154	206	12772	159	18827	1663	21	0	1	347	16	16000	421	354	4127	1010	14	15	2	594	137	8247	6488	1	4	1	0	0	786	1603	16	3	55	7	0	32	261	294	222	1539	927	232	711	858	547	383	744	1203	921	515	1641	59	9	1	148	6	4	0	0	981	580	17	1381	11837	331	58	403	38	1848	4726	16	996	198	69	80	97	117	6681	164	18	17	146	52	911	421	32	2413	74	263	286	279	69	61	3349	25740	2096	12262	3707	31748	2212	16551	34	621	149	239	382	20739	21132	17396	27288	12692	7547	4017	2292	281	1567	4170	11858	6700	20311	12550	265	10389	16444	225	1027	12600	19650	22263	891	284	1558	256	526	566	504	546	126	781	48	1786	41269	2830	1911	2832	1935	2426	16	57	4407	42	296	281
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTT................................................................................................................................................	24	1	712821.00	712821	2	0	0	0	167	15	40	258	238	42	24	118	16	17	63	3	0	16	3	0	486	303	99	0	0	6	76	15	132	115	3905	4361	40	41	169	495	648	558	252	342	70	319	693	532	167	809	366	964	1650	712	774	1042	517	30	0	0	531	413	296	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	571	544	458	361	100	4990	995	5465	3764	662	208	128	78	150	606	468	99	945	2037	404	263	33	14	371	359	1965	30	142	250	540	271	223	81	56	732	1857	175	51	733	218	1830	3763	24	3270	46	1572	1617	8906	132	1679	117	2331	1489	0	0	0	0	49	53	1	2	0	0	97	992	2325	3300	319	355	1619	480	1271	396	832	467	1012	1073	649	0	0	0	0	0	154	71	168	760	56	80	4025	5699	0	4355	31	15	3150	4848	124	4148	148	4608	52	7534	569	0	44	53	3106	32	6686	192	154	1296	854	34	23	30	37	143	3727	3549	28	15	10	11	22	1992	1421	15	7	96	26	13	20	3504	3998	1729	3894	2417	231	420	5538	1481	3247	5508	6343	3131	3368	5224	3283	4	4	2406	12	11	0	0	2473	1224	37	1114	4000	367	528	1282	438	519	1119	217	376	1200	198	353	760	889	1491	914	266	451	1910	580	3280	1844	115	4282	700	2009	2816	1059	279	382	3784	28197	1260	7172	4565	36659	4895	34364	229	1777	1465	490	1333	6107	9155	6389	7814	92954	11943	2426	1809	3604	481	4581	12765	7493	22008	3404	1589	4311	7088	1500	10610	11659	18843	16816	4245	1848	11370	2522	993	2103	5001	5036	1743	3457	432	1013	10829	927	572	1358	1912	1014	529	492	5662	1045	645	663
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGT.................................................................................................................................................	23	1	371066.00	371066	0	0	0	0	101	6	12	25	35	13	15	41	7	6	55	2	0	7	5	0	226	138	91	6	0	12	54	9	74	71	2812	2931	34	34	71	236	205	519	181	209	43	175	249	228	137	412	111	446	820	389	273	415	213	0	42	0	674	704	421	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	87	95	84	67	97	384	67	718	435	314	81	60	31	76	174	420	43	544	1358	233	263	26	9	115	107	1653	33	129	130	186	144	102	79	63	560	221	83	23	245	170	1621	3587	28	1349	22	1281	1650	8667	144	1469	107	2457	1201	0	0	0	0	31	20	1	1	1	0	54	419	561	758	473	257	466	304	473	184	240	233	430	448	244	1	0	1	0	0	36	18	18	159	24	1	3536	5424	0	3703	28	10	2507	3350	81	3032	81	4179	31	6818	427	0	6	27	811	27	5891	159	135	678	637	21	6	7	25	107	1984	2914	7	7	5	4	10	925	1341	7	2	56	17	0	20	588	601	404	1252	642	117	362	3038	1083	1625	2692	4050	2018	1997	4368	1066	11	27	956	10	5	0	0	502	331	31	773	4134	157	118	415	63	479	1064	25	345	285	51	89	141	207	1518	237	55	57	236	66	1028	508	25	3049	158	524	621	438	116	152	2320	16934	1123	6883	2534	20836	2063	15279	50	836	298	160	215	6398	6992	5313	6815	5718	3551	1595	986	708	439	3202	9036	4619	14128	4552	220	4171	6149	515	3323	8570	11458	11800	1264	457	1981	532	350	323	1076	1118	286	1059	100	902	12354	1054	948	1739	1453	1324	53	86	4839	102	328	453
........................................................................................................................................................TGGAAGACTAGTGATTTTGTT...................................................................................................................................................	21	1	176519.00	176519	0	0	0	0	38	0	1	6	5	2	0	9	0	0	49	7	0	10	0	0	64	52	37	48	0	22	23	13	79	74	2214	2380	52	58	73	59	52	137	57	73	16	67	66	68	60	87	19	147	225	172	83	150	80	52	21	0	52	83	50	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	35	33	26	13	41	72	19	62	78	29	2	0	3	10	20	97	6	70	438	30	36	4	2	13	19	429	6	0	22	16	13	4	6	12	51	37	11	3	32	107	1807	1618	23	1111	3	920	935	4051	68	1623	145	1919	1206	0	0	0	0	2	9	0	0	0	1	23	110	184	274	242	40	128	72	110	41	116	101	157	278	144	0	0	0	0	0	6	0	12	27	0	9	4502	5752	0	3242	23	13	1801	2652	78	2345	89	5117	46	6358	381	10	2	18	168	2	4450	76	80	535	97	7	0	0	106	12	1070	621	0	6	0	6	6	163	297	2	0	45	2	0	0	84	52	46	626	449	69	218	646	515	332	756	975	794	376	1803	16	0	0	51	3	0	0	0	186	116	1	612	4350	140	23	78	7	359	1609	14	354	46	9	13	19	50	952	53	5	8	53	12	298	148	16	627	27	82	120	108	17	18	606	4494	345	2083	607	4780	512	3511	6	209	50	51	268	6851	5567	5820	8607	2425	937	693	409	62	288	806	2107	1584	4415	3674	26	2042	3459	27	246	1846	3053	2611	293	75	438	58	126	344	118	161	18	224	11	507	10635	532	248	369	313	317	3	22	1323	19	95	58
........................................................................................................................................................TGGAAGACTAGTGATTTTGT....................................................................................................................................................	20	1	46443.00	46443	0	0	0	0	4	2	0	0	0	1	0	0	0	0	7	0	0	1	2	0	9	9	7	4	0	3	1	1	24	24	342	391	11	16	519	6	10	16	17	11	2	5	8	5	15	7	2	9	35	15	8	6	9	66	14	0	6	5	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	24	31	22	20	3	7	3	4	7	2	1	1	0	1	5	20	1	6	81	4	7	0	2	1	7	66	0	0	2	3	0	1	0	1	4	5	4	2	0	39	428	654	9	248	6	131	200	530	11	301	46	388	258	0	0	6	0	0	0	0	0	0	1	8	15	22	27	33	4	7	5	7	3	12	9	20	35	18	0	0	0	0	0	1	0	0	3	0	8	749	1159	0	470	13	1	256	462	25	376	26	1033	10	980	146	0	0	0	41	2	726	7	8	74	7	0	0	0	9	0	112	78	3	1	2	1	2	15	22	2	0	10	2	0	0	7	19	7	66	30	16	44	76	173	46	76	104	161	46	286	13	1	0	21	2	0	0	0	21	12	0	139	1139	37	6	23	5	112	1282	0	103	21	3	6	5	22	448	13	2	4	9	5	69	32	3	115	7	14	23	16	4	4	43	372	40	228	39	375	39	243	3	74	10	20	78	1744	1149	1725	2561	174	147	123	67	21	103	86	227	152	412	681	15	442	656	7	41	177	334	303	122	37	143	26	54	177	44	63	8	72	2	450	13613	302	93	157	162	142	1	13	540	7	39	38
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTA...............................................................................................................................................	25	1	36530.00	36530	0	0	0	0	2	0	3	5	0	0	0	1	0	0	0	0	0	0	0	0	51	33	7	0	0	0	0	0	0	0	0	0	0	0	47	78	59	102	30	39	2	22	30	56	12	73	13	109	207	37	23	65	47	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	29	9	8	4	21	0	0	0	0	0	1	0	4	5	4	2	0	0	0	1	0	0	0	0	4	2	2	0	0	4	6	0	0	9	2	5	33	1	10	0	6	9	62	2	9	1	16	10	0	0	0	0	0	12	0	0	0	0	11	77	115	205	135	36	126	61	104	41	6	70	124	58	69	0	0	0	0	0	0	0	0	0	0	0	31	31	0	26	1	0	14	20	0	20	1	28	0	54	3	0	0	12	11	0	33	10	15	91	139	2	0	2	0	8	161	413	8	0	0	3	4	237	320	0	3	3	5	0	0	13	7	12	120	31	11	0	233	34	119	97	269	57	119	227	3	0	0	7	81	110	0	0	7	5	0	48	35	1	2	1	3	5	15	3	5	2	1	5	1	4	12	1	1	2	1	2	8	3	1	18	2	14	5	2	0	0	450	3186	63	346	592	4942	433	2923	1	17	5	0	5	52	32	38	55	1534	41	10	12	7	84	359	945	962	2916	21	7	45	74	10	45	1622	3107	3253	34	16	45	18	9	6	23	27	6	24	4	24	188	29	92	546	648	395	5	1	23	5	8	0
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..............................................................................................................................................................ACTAGTGATTTTGTTGTT................................................................................................................................................	18	1	1815.00	1815	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	4	7	0	0	0	0	0	0	4	6	3	0	4	1	9	4	6	2	1	1	0	0	0	2	1	1	0	0	0	0	0	0	0	0	1	3	0	1	0	0	0	4	0	2	0	1	0	0	0	0	0	2	4	0	7	8	7	0	0	0	0	0	0	0	2	1	75	47	27	43	53	5	1	0	0	0	0	0	0	0	0	0	13	8	2	14	48	17	28	39	87	33	43	60	34	0	0	15	1	0	0	0	7	6	0	1	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	1	0	1	0	13	4	4	6	3	1	2	47	279	15	93	11	80	13	108	4	7	4	0	2	3	20	8	16	103	13	1	2	4	0	7	14	2	12	4	0	4	1	1	17	9	4	12	2	1	6	1	0	0	4	1	0	3	0	0	2	1	0	0	1	0	1	1	7	0	1	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTG..................................................................................................................................................	21	1	1619.00	1619	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	58	71	1	2	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	11	14	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	5	0	0	0	1	0	0	0	0	1	0	0	0	0	2	19	54	0	20	0	15	22	98	2	36	9	27	33	0	0	0	0	0	0	0	0	0	0	0	1	2	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	119	128	0	88	0	0	36	93	2	73	1	111	6	277	4	0	0	0	0	0	104	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	1	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	0	1	0	0	0	1	0	0	0	1	0	1	1	0	5	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	1	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTC................................................................................................................................................	24	1	1368.00	1368	0	0	0	0	4	1	1	2	5	0	0	7	0	2	3	0	0	0	0	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	2	5	4	1	1	0	0	1	0	1	0	4	6	1	0	1	0	0	0	7	0	1	2	0	0	2	1	0	1	2	0	0	0	1	1	10	0	9	0	7	3	26	0	3	0	10	3	0	0	0	0	0	0	0	0	0	0	0	0	3	10	0	0	0	0	2	0	2	1	0	0	0	0	0	0	0	0	0	0	0	3	0	0	7	7	0	4	0	0	33	11	0	12	0	11	0	35	5	0	0	0	0	0	96	1	0	0	0	0	0	0	0	0	9	3	0	0	0	0	0	4	0	0	0	0	0	0	0	8	0	1	3	2	1	3	0	1	0	3	2	0	0	1	4	0	0	2	3	1	0	0	1	4	1	3	10	0	1	4	0	2	3	0	1	1	0	0	1	3	1	2	0	2	2	1	6	0	0	6	1	1	1	1	1	0	10	124	2	16	9	61	6	56	1	4	2	0	3	20	21	21	24	154	30	7	0	4	3	15	8	19	23	7	1	9	16	5	11	5	18	13	12	2	16	8	2	4	5	8	4	5	0	2	11	1	1	1	6	1	0	1	35	0	2	3
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTAT......................................................................................................	22	1	1335.00	1335	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	3	2	1	6	1	0	0	1	0	2	3	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	14	9	8	9	0	4	0	3	2	1	1	1	1	0	1	0	0	0	0	1	1	1	0	0	1	11	0	1	1	1	0	0	0	0	0	1	0	0	0	0	3	0	0	0	0	2	1	0	0	2	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	1	4	4	2	3	0	5	2	0	5	0	0	0	0	0	0	0	0	0	0	0	6	18	0	5	0	0	2	3	0	2	0	6	0	14	0	0	0	0	0	0	5	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	24	1	0	99	27	91	155	132	22	84	76	18	0	0	18	0	0	0	0	2	0	0	0	0	1	2	0	1	3	3	1	5	0	0	0	3	2	0	1	0	1	2	0	0	1	0	3	1	0	1	0	2	3	6	31	2	4	6	25	3	31	1	2	6	0	8	9	11	5	7	6	3	0	0	0	0	10	15	3	6	0	0	0	0	0	14	73	4	3	5	0	2	0	0	1	2	0	1	1	0	0	3	0	1	2	0	0	0	5	3	6	4	0
........................................................................................................................................................TGGAAGACTAGTGATTTT......................................................................................................................................................	18	1	1239.00	1239	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	4	0	1	0	0	0	8	66	17	7	7	21	15	0	0	0	0	0	0	0	0	0	0	4	0	0	1	3	0	0	0	0	0	0	0	3	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	4	3	0	0	0	0	0	0	1	0	1	12	0	0	0	0	0	0	1	0	3	0	3	0	0	0	0	0	0	0	0	0	0	14	3	0	0	0	0	3	1	0	4	109	20	3	0	0	1	0	0	0	0	0	0	1	1	1	1	0	0	0	1	1	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	13	27	0	8	14	8	9	8	18	7	66	43	4	26	68	0	0	0	8	0	39	3	1	4	0	0	0	0	1	0	10	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	1	21	9	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	11	1	0	0	0	1	17	0	0	1	0	0	0	0	2	0	0	0	0	0	4	0	0	13	1	1	1	0	0	0	1	9	2	11	4	14	2	11	0	6	0	0	5	52	19	47	72	14	4	3	1	2	9	3	4	1	5	10	0	6	7	0	3	1	3	0	1	0	0	0	0	0	0	0	0	0	0	3	41	0	1	0	0	2	0	0	10	0	0	5
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTC...............................................................................................................................................	25	1	1213.00	1213	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	2	1	1	0	0	0	1	1	0	2	0	2	11	2	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	1	5	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	8	0	8	0	0	1	19	0	3	0	5	2	0	0	0	0	0	0	0	0	0	0	0	2	2	0	1	0	1	0	2	2	1	0	0	3	2	0	0	0	0	0	0	0	0	0	0	0	2	6	0	3	0	0	0	6	0	6	0	9	0	7	0	0	0	0	0	0	10	0	0	1	1	0	0	0	0	0	4	9	0	0	0	0	0	4	1	0	0	0	0	0	0	5	5	2	6	8	0	4	14	5	9	6	13	4	10	17	19	0	0	12	17	8	0	0	4	2	0	1	4	1	0	3	4	0	2	1	1	7	0	2	2	1	6	1	1	0	0	0	11	4	0	3	1	5	3	2	1	0	6	40	1	23	10	76	5	41	0	7	7	0	4	13	8	5	9	72	20	4	4	7	2	13	25	31	66	1	1	6	5	4	7	19	22	22	18	7	26	8	1	8	10	9	1	5	0	2	40	5	5	9	14	6	0	3	25	1	8	0
.............................................................................................................................................................GACTAGTGATTTTGTTGT.................................................................................................................................................	18	1	1205.00	1205	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	4	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	12	0	0	0	0	0	1	1	1	2	0	0	0	4	3	2	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	3	8	5	1	0	0	0	0	3	0	0	0	8	5	1	18	11	2	5	0	0	0	0	0	0	0	0	0	13	5	5	20	1	0	0	2	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	39	5	8	7	8	1	1	43	258	30	177	23	125	25	124	0	6	1	0	0	3	3	5	11	8	1	1	1	0	0	5	18	1	6	2	0	1	4	2	8	24	14	6	2	0	0	1	0	0	0	2	0	0	0	0	3	0	1	0	0	0	0	0	4	0	1	9
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............................................................................................................................................................AGACTAGTGATTTTGTTG..................................................................................................................................................	18	1	395.00	395	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	1	1	0	4	1	3	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	1	0	0	0	2	0	2	0	1	0	7	0	0	0	0	0	0	2	1	2	0	0	0	0	0	0	0	0	0	6	4	1	4	3	1	0	0	0	0	0	0	0	0	0	0	0	1	0	2	14	8	6	5	25	12	8	23	1	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	1	0	0	0	1	0	0	15	122	3	17	3	17	1	13	0	0	0	0	0	2	3	3	5	0	1	0	0	0	0	1	5	0	1	0	0	0	1	0	0	1	0	2	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	1	0	0	0	0	1	1
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........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTT..............................................................................................................................................	26	1	366.00	366	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	2	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	6	3	0	1	1	1	0	4	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	1	0	0	0	3	0	3	0	3	1	5	0	0	0	0	0	0	1	2	0	4	0	0	0	0	0	0	12	6	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	1	2	1	0	3	6	1	2	2	9	0	0	3	0	0	0	0	1	0	0	0	1	0	0	1	0	0	1	1	2	0	0	0	1	1	0	2	0	1	0	1	0	1	0	7	1	2	2	2	1	0	2	6	0	2	2	14	0	9	0	4	0	0	0	7	5	2	2	17	2	1	1	6	0	0	1	6	16	0	2	1	3	1	4	11	11	19	6	0	3	3	0	0	7	3	0	0	0	2	9	5	0	0	2	0	1	0	20	1	1	4
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........................................................................................................................................................TGGAAGACTAGTGATTTTGTC...................................................................................................................................................	21	1	300.00	300	0	0	0	0	1	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	2	0	3	0	2	2	12	0	1	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	13	0	3	0	1	15	4	0	4	0	9	0	15	1	0	0	0	0	0	37	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	3	0	1	0	0	0	0	0	2	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	4	14	1	5	0	3	0	2	0	1	0	0	2	16	8	8	18	1	1	0	2	0	0	3	1	4	1	11	0	4	5	1	0	1	1	2	1	0	0	0	0	0	0	0	0	0	0	0	13	1	0	0	0	0	0	0	2	0	1	0
.......................................................................................................................................................ATGGAAGACTAGTGATTTTGTTGTT................................................................................................................................................	25	1	285.00	285	0	0	0	0	0	0	0	4	3	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	17	5	25	30	2	0	0	0	0	1	0	0	9	8	1	0	0	0	4	6	0	0	0	1	4	0	0	0	0	1	3	0	0	2	0	1	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	1	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0	0	0	0	1	0	2	0	1	1	0	0	0	0	2	0	5	2	4	0	0	0	0	0	0	0	0	3	0	4	39	3	0	0	1	0	0	2	0	0	0	0	0	0	3	3	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	58
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTCT.........................................................................................................	20	1	284.00	284	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	6	1	0	0	0	0	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	7	27	0	1	0	0	2	0	2	2	0	7	0	19	5	0	0	6	0	0	4	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	7	5	5	1	4	2	3	4	4	2	0	0	0	0	0	0	1	0	0	0	1	1	0	1	0	1	3	0	0	1	1	0	1	1	0	0	0	0	0	0	0	0	0	1	0	2	2	2	0	0	0	0	0	0	0	2	1	0	2	4	0	0	5	1	9	12	11	0	0	0	0	0	0	1	1	0	0	0	0	0	0	2	0	0	1	0	25	2	0	1	0	0	1	0	0	2	0	0	6	1	0	2	0	0	2	13	4	3	2	0

droSim2

T------GTGCTT----------------GATC-----GTAAC--TCCATCCA-AACTCGATATT-----------------AACTAAC-----CGA-------------------------TTGGT-C-CTCC-TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------T-----ATCGATGGT----------------TAACCAA-TAAAACTA-----------------------	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTT................................................................................................................................................	24	1	310760.00	310760	262	11	104	2665	787	4403	127466	113574	31603	21682	4537	2878	323	403	0	57	5
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTG..................................................................................................................................................	22	1	207191.00	207191	212	8	22	2042	1221	8906	56323	52480	55040	26459	2666	1061	147	589	1	10	4
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGT.................................................................................................................................................	23	1	140125.00	140125	134	0	15	1130	410	3110	39177	36878	36519	19384	2365	563	184	211	1	35	9
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAA..............................................................................................................................................	26	1	135838.00	135838	0	0	1	275	0	0	27143	25816	57463	24737	332	54	16	0	0	0	1
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAA.............................................................................................................................................	27	1	61409.00	61409	0	0	0	342	0	0	15300	14092	22438	9075	141	4	15	2	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTT...................................................................................................................................................	21	1	42488.00	42488	150	10	5	246	383	2565	13109	13346	6904	4290	1136	183	35	122	1	1	2
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTA...............................................................................................................................................	25	1	28514.00	28514	0	0	4	147	0	0	9608	7810	6912	3450	436	131	13	3	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTAA.................................................................................................................................................	23	1	14368.00	14368	3	0	0	41	0	0	3131	2771	5425	2846	118	25	4	4	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTAA...............................................................................................................................................	25	1	13613.00	13613	0	0	0	44	0	0	2158	2350	6310	2682	56	9	3	1	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTAAA..............................................................................................................................................	26	1	7265.00	7265	0	0	0	67	0	0	1449	1426	3046	1218	51	2	4	2	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTA..................................................................................................................................................	22	1	6772.00	6772	5	0	0	26	0	0	2115	1730	1617	1010	195	42	16	16	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGT....................................................................................................................................................	20	1	5160.00	5160	66	3	3	47	368	2332	584	768	382	224	269	31	8	73	0	2	0
........................................................................................................................................................TGGAAGACTAGTGATTTTG.....................................................................................................................................................	19	1	4741.00	4741	8	0	3	4	546	3510	158	156	81	50	129	0	2	94	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTT......................................................................................................................................................	18	1	4296.00	4296	1	0	0	2	464	3550	10	24	20	24	197	0	0	4	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTA................................................................................................................................................	24	1	4185.00	4185	1	0	0	17	0	0	1005	999	1412	707	28	10	2	4	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTT...............................................................................................................................................	25	1	3843.00	3843	3	0	2	60	38	63	1515	1218	506	287	59	40	4	48	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTAAA................................................................................................................................................	24	1	3476.00	3476	0	0	0	22	0	0	834	685	1268	620	39	6	2	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGA.................................................................................................................................................	23	1	1686.00	1686	2	0	0	16	0	0	334	263	639	386	28	4	1	13	0	0	0
............................................................................................................................................................AGACTAGTGATTTTGTTGTT................................................................................................................................................	20	1	1646.00	1646	6	0	4	0	0	1	1	4	0	9	1618	3	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAT..............................................................................................................................................	26	1	1640.00	1640	0	0	0	6	0	0	308	371	608	338	7	1	0	1	0	0	0
.............................................................................................................................................................GACTAGTGATTTTGTTGT.................................................................................................................................................	18	1	1364.00	1364	0	0	0	0	0	1	0	0	1	4	1358	0	0	0	0	0	0
.............................................................................................................................................................GACTAGTGATTTTGTTGTT................................................................................................................................................	19	1	1216.00	1216	1	2	1	0	0	1	0	9	3	9	1189	1	0	0	0	0	0
...............................................................................................................................................................CTAGTGATTTTGTTGTT................................................................................................................................................	17	1	939.00	939	0	0	0	0	0	0	6	4	7	24	898	0	0	0	0	0	0
..............................................................................................................................................................ACTAGTGATTTTGTTGT.................................................................................................................................................	17	1	899.00	899	0	0	0	0	0	0	5	8	11	9	866	0	0	0	0	0	0
..............................................................................................................................................................ACTAGTGATTTTGTTGTT................................................................................................................................................	18	1	869.00	869	5	0	3	0	0	0	8	7	3	4	837	2	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTAA.............................................................................................................................................	27	1	768.00	768	0	0	0	1	0	0	101	97	387	181	0	0	1	0	0	0	0
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTCTTA.......................................................................................................	22	1	763.00	763	9	1	12	13	4	2	94	67	6	14	22	490	9	20	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATT........................................................................................................................................................	16	1	569.00	569	0	0	0	0	0	0	14	20	22	51	462	0	0	0	0	0	0
............................................................................................................................................................AGACTAGTGATTTTGTTGT.................................................................................................................................................	19	1	561.00	561	1	0	0	0	0	0	0	1	1	8	550	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTG...............................................................................................................................................	25	1	535.00	535	0	0	0	4	0	0	154	148	155	69	3	1	0	1	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTT..................................................................................................................................................	22	1	519.00	519	19	2	1	18	0	0	93	244	49	39	10	6	1	37	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTAAA............................................................................................................................................	28	1	498.00	498	0	0	0	7	0	0	136	123	184	47	1	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTA..............................................................................................................................................	26	1	403.00	403	0	0	0	2	0	0	102	82	143	73	1	0	0	0	0	0	0
...........................................................................................................................................................AAGACTAGTGATTTTGTTGT.................................................................................................................................................	20	1	364.00	364	11	0	0	0	1	1	1	1	3	1	344	1	0	0	0	0	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTT................................................................................................................................................	23	1	363.00	363	9	0	2	215	7	31	32	45	5	9	1	0	6	1	0	0	0
...........................................................................................................................................................AAGACTAGTGATTTTGTTGTT................................................................................................................................................	21	1	349.00	349	30	3	9	2	3	1	2	2	9	3	285	0	0	0	0	0	0
...............................................................................................................................................................CTAGTGATTTTGTTGT.................................................................................................................................................	16	1	339.00	339	0	0	0	0	0	0	4	1	5	14	315	0	0	0	0	0	0
..........................................................................................................................................................GAAGACTAGTGATTTTGTTGTT................................................................................................................................................	22	1	322.00	322	164	5	70	12	0	1	18	12	11	8	21	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGAA................................................................................................................................................	24	1	318.00	318	1	0	0	2	0	0	52	56	137	63	5	0	0	2	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTAA..................................................................................................................................................	22	1	259.00	259	0	0	0	0	0	0	64	65	85	40	4	0	0	1	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGAAA...............................................................................................................................................	25	1	250.00	250	0	0	0	5	0	0	51	41	105	46	2	0	0	0	0	0	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTG..................................................................................................................................................	21	1	235.00	235	4	0	0	146	9	63	1	3	2	4	0	0	1	2	0	0	0
................................................................................................................................................................TAGTGATTTTGTTGTT................................................................................................................................................	16	2	233.50	467	0	0	0	0	0	0	3	0	5	14	445	0	0	0	0	0	0
...........................................................................................................................................................AAGACTAGTGATTTTGTTG..................................................................................................................................................	19	1	221.00	221	20	0	1	0	1	1	2	0	3	0	193	0	0	0	0	0	0
............................................................................................................................................................AGACTAGTGATTTTGTTG..................................................................................................................................................	18	1	191.00	191	13	0	0	2	2	1	1	1	2	1	168	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAC..............................................................................................................................................	26	1	185.00	185	0	0	0	1	0	0	38	47	59	39	0	0	0	1	0	0	0
..........................................................................................................................................................GAAGACTAGTGATTTTGTTG..................................................................................................................................................	20	1	177.00	177	117	1	8	8	1	1	6	4	10	3	17	0	0	1	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTATA.............................................................................................................................................	27	1	171.00	171	0	0	0	2	0	0	38	30	64	36	0	0	1	0	0	0	0
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTA.......................................................................................................	21	1	167.00	167	1	0	0	1	0	1	41	36	13	8	12	29	1	24	0	0	0
.............................................................................................................................................................GACTAGTGATTTTGTTG..................................................................................................................................................	17	1	162.00	162	0	0	0	0	0	0	0	0	0	0	162	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTT.......................................................................................................................................................	17	1	157.00	157	0	0	0	0	0	0	7	12	7	11	120	0	0	0	0	0	0
...........................................................................................................................................................AAGACTAGTGATTTTGTT...................................................................................................................................................	18	1	139.00	139	52	0	5	0	0	0	0	0	1	1	80	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGC.................................................................................................................................................	23	1	138.00	138	3	0	1	2	0	0	42	35	19	20	14	2	0	0	0	0	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGT.................................................................................................................................................	22	1	134.00	134	4	0	1	99	1	13	2	1	3	3	1	0	5	1	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAC.............................................................................................................................................	27	1	123.00	123	0	0	0	1	0	0	30	25	50	15	1	0	0	1	0	0	0
........................................................................................................................................................TGGAAGACTAGTGAT.........................................................................................................................................................	15	1	120.00	120	0	0	0	0	0	0	3	11	10	15	81	0	0	0	0	0	0
..........................................................................................................................................................GAAGACTAGTGATTTTGTTGT.................................................................................................................................................	21	1	120.00	120	73	0	6	4	1	0	2	8	9	2	15	0	0	0	0	0	0
...............................................................................................................................................................CTAGTGATTTTGTTG..................................................................................................................................................	15	1	119.00	119	0	0	0	0	0	0	1	0	1	0	117	0	0	0	0	0	0
..............................................................................................................................................................ACTAGTGATTTTGTTG..................................................................................................................................................	16	1	118.00	118	0	0	0	0	0	0	0	0	0	2	116	0	0	0	0	0	0
..........................................................................................................................................................GAAGACTAGTGATTTTGTT...................................................................................................................................................	19	1	117.00	117	101	0	5	1	1	0	1	1	0	2	5	0	0	0	0	0	0
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTCTT........................................................................................................	21	1	114.00	114	8	2	0	11	13	34	9	5	3	5	10	12	1	1	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTA...................................................................................................................................................	21	1	111.00	111	0	0	0	1	0	0	33	36	26	14	1	0	0	0	0	0	0
.................................................................................................................................................................AGTGATTTTGTTGTT................................................................................................................................................	15	4	104.25	417	0	0	0	0	0	0	18	6	8	12	373	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTC...............................................................................................................................................	25	1	104.00	104	0	0	0	3	0	0	26	20	11	16	24	3	0	1	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAT.............................................................................................................................................	27	1	101.00	101	0	0	0	3	0	0	25	22	36	14	1	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTAAA.................................................................................................................................................	23	1	100.00	100	0	0	0	0	0	0	27	18	33	22	0	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTC................................................................................................................................................	24	1	99.00	99	3	0	3	0	0	0	21	19	17	12	20	4	0	0	0	0	0
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTAAA.....................................................................................................	23	1	86.00	86	0	0	0	0	0	0	17	11	32	17	6	0	1	2	0	0	0
..........................................................................................................................................................GAAGACTAGTGATTTTGT....................................................................................................................................................	18	1	84.00	84	77	0	0	0	0	1	1	1	1	0	3	0	0	0	0	0	0
............................................................................................................................................................AGACTAGTGATTTTGTT...................................................................................................................................................	17	1	79.00	79	0	0	0	0	0	0	0	2	0	1	76	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGG.................................................................................................................................................	23	1	77.00	77	13	0	1	4	0	0	26	26	0	1	6	0	0	0	0	0	0
.............................................................................................................................................................GACTAGTGATTTTGTT...................................................................................................................................................	16	1	74.00	74	0	0	0	0	0	0	0	0	0	0	74	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTACA.............................................................................................................................................	27	1	71.00	71	0	0	0	0	0	0	21	12	22	15	0	0	1	0	0	0	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTT...................................................................................................................................................	20	1	68.00	68	15	1	0	24	3	22	0	0	1	1	1	0	0	0	0	0	0
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTAA......................................................................................................	22	1	68.00	68	2	0	0	1	0	0	13	16	10	9	8	2	1	6	0	0	0
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTCTTACG.....................................................................................................	24	1	65.00	65	0	0	0	0	31	34	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTGA..............................................................................................................................................	26	1	64.00	64	0	0	0	0	0	0	16	23	19	5	1	0	0	0	0	0	0
................................................................................................................................................................TAGTGATTTTGTTGT.................................................................................................................................................	15	2	60.00	120	0	0	0	0	0	0	2	3	4	10	101	0	0	0	0	0	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTTAA..............................................................................................................................................	25	1	57.00	57	0	0	0	19	0	0	4	7	20	6	0	0	1	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTG................................................................................................................................................	24	1	54.00	54	1	0	0	9	0	0	8	8	9	4	13	2	0	0	0	0	0
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTAT......................................................................................................	22	1	50.00	50	0	0	0	0	0	0	10	5	7	8	3	0	1	16	0	0	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTTAAA.............................................................................................................................................	26	1	48.00	48	0	0	0	33	0	0	0	4	9	2	0	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTTAA................................................................................................................................................	24	2	44.50	89	0	0	0	1	0	0	13	6	50	19	0	0	0	0	0	0	0
............................................................................................................................................................AGACTAGTGATTTTGT....................................................................................................................................................	16	1	43.00	43	0	0	0	0	0	0	0	0	0	0	43	0	0	0	0	0	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGT....................................................................................................................................................	19	1	42.00	42	6	0	0	1	7	28	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................GACTAGTGATTTTGT....................................................................................................................................................	15	1	39.00	39	0	0	0	0	0	0	0	0	0	0	39	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTCAA..............................................................................................................................................	26	1	36.00	36	0	0	0	1	0	0	3	3	17	12	0	0	0	0	0	0	0
..............................................................................................................................................................ACTAGTGATTTTGTT...................................................................................................................................................	15	2	36.00	72	0	0	0	0	0	0	1	1	1	2	67	0	0	0	0	0	0
.........................................................................................................................................................GGAAGACTAGTGATTTTG.....................................................................................................................................................	18	1	35.00	35	1	0	0	1	6	27	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTC..................................................................................................................................................	22	1	35.00	35	0	0	0	1	0	0	10	6	6	5	6	1	0	0	0	0	0
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTCT.........................................................................................................	20	1	35.00	35	2	1	3	2	8	14	0	0	1	0	3	0	0	1	0	0	0
...........................................................................................................................................................AAGACTAGTGATTTTGT....................................................................................................................................................	17	1	33.00	33	0	0	0	0	0	0	0	0	0	1	32	0	0	0	0	0	0
..........................................................................................................................................................GAAGACTAGTGATTTTGTTGTTAA..............................................................................................................................................	24	1	30.00	30	0	0	0	0	0	0	1	3	14	9	3	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTGAA.............................................................................................................................................	27	1	30.00	30	0	0	0	0	0	0	15	5	5	4	1	0	0	0	0	0	0
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTT........................................................................................................	20	1	30.00	30	0	0	0	1	1	0	4	4	4	6	4	3	1	2	0	0	0
..........................................................................................................................................................GAAGACTAGTGATTTTGTTGTTA...............................................................................................................................................	23	1	30.00	30	1	0	3	1	0	0	4	5	8	6	2	0	0	0	0	0	0

droSec2

T------GTGCTT----------------GATC-----GTAAC--TCCATCCA-AACTCGATATT-----------------AACTAAC-----CGA-------------------------TTGGT-C-CTCC-TGGGAGTGCATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------T-----ATCGATGGT----------------TAACCAA-TAAAACTA-----------------------	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTT................................................................................................................................................	24	1	19428.00	19428	8104	1350	5620	4354
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTG..................................................................................................................................................	22	1	19244.00	19244	2823	1339	1644	13438
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGT.................................................................................................................................................	23	1	7296.00	7296	2374	699	1086	3137
........................................................................................................................................................TGGAAGACTAGTGATTTTGTT...................................................................................................................................................	21	1	5453.00	5453	656	320	202	4275
........................................................................................................................................................TGGAAGACTAGTGATTTTGT....................................................................................................................................................	20	1	2631.00	2631	131	130	40	2330
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTT................................................................................................................................................	23	1	624.00	624	624	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTT..................................................................................................................................................	22	1	529.00	529	71	48	7	403
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTA...............................................................................................................................................	25	1	509.00	509	332	21	90	66
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTCTTA.......................................................................................................	22	1	509.00	509	54	8	334	113
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTT...............................................................................................................................................	25	1	493.00	493	160	79	99	155
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAA..............................................................................................................................................	26	1	360.00	360	294	3	39	24
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTCTT........................................................................................................	21	1	281.00	281	37	26	20	198
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTG..................................................................................................................................................	21	1	246.00	246	246	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGA.................................................................................................................................................	23	1	200.00	200	27	11	6	156
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAA.............................................................................................................................................	27	1	190.00	190	166	1	16	7
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTA..................................................................................................................................................	22	1	186.00	186	45	6	22	113
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGT.................................................................................................................................................	22	1	165.00	165	165	0	0	0
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTA.......................................................................................................	21	1	157.00	157	44	12	33	68
........................................................................................................................................................TGGAAGACTAGTGATTTTG.....................................................................................................................................................	19	1	126.00	126	29	2	1	94
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTT........................................................................................................	20	1	99.00	99	23	14	6	56
.........................................................................................................................................................GGAAGACTAGTGATTTTGTT...................................................................................................................................................	20	1	56.00	56	56	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTAA.................................................................................................................................................	23	1	56.00	56	19	1	18	18
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTCT.........................................................................................................	20	1	56.00	56	1	2	3	50
........................................................................................................................................................TGGAAGACTAGTGATTTT......................................................................................................................................................	18	1	54.00	54	1	0	3	50
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTAA...............................................................................................................................................	25	1	40.00	40	21	1	11	7
..........................................................................................................................................................GAAGACTAGTGATTTTGTTGTT................................................................................................................................................	22	1	39.00	39	22	1	9	7
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTA................................................................................................................................................	24	1	29.00	29	10	2	8	9
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTT..............................................................................................................................................	26	1	26.00	26	7	9	5	5
..........................................................................................................................................................GAAGACTAGTGATTTTGTTG..................................................................................................................................................	20	1	26.00	26	6	1	1	18
............................................................................................................................................................AGACTAGTGATTTTGTTGTT................................................................................................................................................	20	1	25.00	25	2	0	15	8
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTTA...............................................................................................................................................	24	1	24.00	24	24	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTC...............................................................................................................................................	25	1	22.00	22	8	2	6	6
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTTAA..............................................................................................................................................	25	1	21.00	21	21	0	0	0
..............................................................................................................................................................ACTAGTGATTTTGTTGTT................................................................................................................................................	18	1	20.00	20	0	0	14	6
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTG................................................................................................................................................	24	1	19.00	19	18	0	0	1
........................................................................................................................................................TGGAAGACTAGTGATTTTGA....................................................................................................................................................	20	1	17.00	17	0	2	0	15
.....................................................................................................................................................................................................ATAAATCCCTTGTCTTCTTA.......................................................................................................	20	1	17.00	17	13	0	2	2
..........................................................................................................................................................GAAGACTAGTGATTTTGTTGT.................................................................................................................................................	21	1	17.00	17	9	2	1	5
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTAA......................................................................................................	22	1	17.00	17	6	0	4	7
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTAAA..............................................................................................................................................	26	1	17.00	17	10	2	3	2
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTC................................................................................................................................................	24	1	17.00	17	3	3	8	3
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAT..............................................................................................................................................	26	1	16.00	16	13	1	2	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTTAAA.............................................................................................................................................	26	1	16.00	16	16	0	0	0
.............................................................................................................................................................GACTAGTGATTTTGTTGT.................................................................................................................................................	18	1	15.00	15	2	0	3	10
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTG...............................................................................................................................................	25	1	14.00	14	11	0	1	2
...................................................................................................................................TCC-TGGGAGTGCATTCCGTA........................................................................................................................................................................	20	1	14.00	14	0	1	13	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGAA................................................................................................................................................	24	1	12.00	12	2	2	0	8
...........................................................................................................................................................AAGACTAGTGATTTTGTTGTT................................................................................................................................................	21	1	12.00	12	3	0	3	6
....................................................................................................................................CC-TGGGAGTGCATTCCGTA........................................................................................................................................................................	19	1	12.00	12	1	0	11	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGC.................................................................................................................................................	23	1	11.00	11	4	1	0	6
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTTT...............................................................................................................................................	24	1	11.00	11	11	0	0	0
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTAT......................................................................................................	22	1	11.00	11	7	0	3	1
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTC..................................................................................................................................................	22	1	11.00	11	1	2	0	8
........................................................................................................................................................TGGAAGACTAGTGATTTTGTAA..................................................................................................................................................	22	1	9.00	9	0	0	0	9
.........................................................................................................................................................GGAAGACTAGTGATTTTGT....................................................................................................................................................	19	1	9.00	9	9	0	0	0
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCT.........................................................................................................	19	1	9.00	9	0	0	0	9
...........................................................................................................................................................AAGACTAGTGATTTTGTTG..................................................................................................................................................	19	1	9.00	9	2	0	0	7
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGG.................................................................................................................................................	23	1	9.00	9	6	0	2	1
.............................................................................................................................................................GACTAGTGATTTTGTTGTT................................................................................................................................................	19	1	8.00	8	1	0	7	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTT..................................................................................................................................................	21	1	8.00	8	8	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAC..............................................................................................................................................	26	1	8.00	8	8	0	0	0
..........................................................................................................................................................GAAGACTAGTGATTTTGTT...................................................................................................................................................	19	1	8.00	8	3	0	0	5
........................................................................................................................................................TGGAAGACTAGTGATTTTGTA...................................................................................................................................................	21	1	7.00	7	1	0	0	6
........................................................................................................................................................TGGAAGACTAGTGATTTTTG....................................................................................................................................................	20	1	7.00	7	0	0	2	5
...........................................................................................................................................................AAGACTAGTGATTTTGTTGT.................................................................................................................................................	20	1	6.00	6	2	1	0	3
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTAAA................................................................................................................................................	24	1	6.00	6	5	0	0	1
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTA..............................................................................................................................................	26	1	6.00	6	6	0	0	0
............................................................................................................................................................AGACTAGTGATTTTGTTG..................................................................................................................................................	18	1	6.00	6	3	0	2	1
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTAA.............................................................................................................................................	27	1	5.00	5	5	0	0	0
...................................................................................................................................................................................................CAATAAATCCCTTGTCTT...........................................................................................................	18	1	5.00	5	0	0	0	5
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGA.................................................................................................................................................	22	1	5.00	5	5	0	0	0
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTC..........................................................................................................	19	1	5.00	5	2	0	0	3
..........................................................................................................................................................GAAGACTAGTGATTTTGT....................................................................................................................................................	18	1	5.00	5	1	0	0	4
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTTA.................................................................................................................................................	23	1	4.00	4	2	0	0	2
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTAAA............................................................................................................................................	28	1	4.00	4	4	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTC...................................................................................................................................................	21	1	4.00	4	0	1	1	2
..........................................................................................................................................................GAAGACTAGTGATTTTGTTGTTA...............................................................................................................................................	23	1	4.00	4	3	1	0	0
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTAAA.....................................................................................................	23	1	4.00	4	2	0	2	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTG...................................................................................................................................................	21	1	4.00	4	4	0	0	0
.......................................................................................................................................................ATGGAAGACTAGTGATTTTGTTG..................................................................................................................................................	23	1	4.00	4	3	0	0	1
............................................................................................................................................................AGACTAGTGATTTTGTTGT.................................................................................................................................................	19	1	4.00	4	0	2	0	2
.....................................................................................................................................C-TGGGAGTGCATTCCGTA........................................................................................................................................................................	18	1	4.00	4	1	0	3	0

droYak3

-----------------------------------------------CATACA-AACTCGTTATT-----------------AACTAAC-----CGA-------------------------CTGGT-C-CTCC-TGGGAGTGCATTTCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------T-----ATC-------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTT................................................................................................................................................	24	1	186148.00	186148	24	3826	176135	2999	509	1624	611	3	2	23	392
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGT.................................................................................................................................................	23	1	22082.00	22082	16	1310	18385	485	431	1056	345	5	0	15	34
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTC................................................................................................................................................	24	1	19452.00	19452	2	6	19434	5	0	1	0	0	0	0	4
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTG..................................................................................................................................................	22	1	11051.00	11051	21	1574	2846	511	1466	3855	760	1	2	10	5
........................................................................................................................................................TGGAAGACTAGTGATTTTGTT...................................................................................................................................................	21	1	7001.00	7001	26	650	2185	108	1004	2612	413	0	0	2	1
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGC.................................................................................................................................................	23	1	3736.00	3736	1	2	3729	1	2	1	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTT...............................................................................................................................................	25	1	3002.00	3002	1	122	2618	81	28	48	35	0	0	3	66
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTCTTA.......................................................................................................	22	1	1900.00	1900	4	43	1088	759	3	2	1	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGT....................................................................................................................................................	20	1	1520.00	1520	17	150	324	31	234	609	155	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTA...............................................................................................................................................	25	1	472.00	472	0	137	237	66	3	7	10	0	0	0	12
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTC...............................................................................................................................................	25	1	461.00	461	0	3	446	9	0	2	1	0	0	0	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTT................................................................................................................................................	23	1	422.00	422	1	348	73	0	0	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTT..................................................................................................................................................	22	1	386.00	386	1	29	88	5	118	128	17	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTC...................................................................................................................................................	21	1	322.00	322	1	1	315	0	1	4	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAA..............................................................................................................................................	26	1	180.00	180	0	109	45	15	1	0	2	0	0	0	8
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTA................................................................................................................................................	24	1	180.00	180	0	16	156	4	0	1	3	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTG................................................................................................................................................	24	1	165.00	165	0	21	138	1	1	1	0	0	0	0	3
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAA.............................................................................................................................................	27	1	141.00	141	0	126	12	2	0	0	1	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTG.....................................................................................................................................................	19	1	139.00	139	2	25	29	0	30	48	5	0	0	0	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTG..................................................................................................................................................	21	1	137.00	137	1	132	2	1	0	1	0	0	0	0	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGT.................................................................................................................................................	22	1	123.00	123	0	115	7	0	0	0	0	0	0	1	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTA..................................................................................................................................................	22	1	109.00	109	0	21	33	11	6	29	9	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGAC................................................................................................................................................	24	1	107.00	107	0	0	107	0	0	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGC....................................................................................................................................................	20	1	95.00	95	1	0	91	0	0	2	1	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGA.................................................................................................................................................	23	1	88.00	88	1	5	26	1	10	38	7	0	0	0	0
..........................................................................................................................................................GAAGACTAGTGATTTTGTTGTT................................................................................................................................................	22	1	80.00	80	21	14	44	0	0	0	1	0	0	0	0
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTCTT........................................................................................................	21	1	70.00	70	0	5	55	3	3	4	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTT..............................................................................................................................................	26	1	66.00	66	0	5	39	2	1	2	2	0	0	0	15
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAT..............................................................................................................................................	26	1	64.00	64	0	11	9	0	0	0	0	0	0	0	44
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTA.......................................................................................................	21	1	63.00	63	0	5	36	20	1	1	0	0	0	0	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTT...................................................................................................................................................	20	1	57.00	57	1	56	0	0	0	0	0	0	0	0	0
............................................................................................................................................................AGACTAGTGATTTTGTTGTT................................................................................................................................................	20	1	47.00	47	0	6	5	0	1	3	1	0	0	0	31
.............................................................................................................................................................GACTAGTGATTTTGTTGTT................................................................................................................................................	19	1	46.00	46	0	6	11	0	0	3	3	0	0	0	23
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTAA.................................................................................................................................................	23	1	40.00	40	0	7	19	10	1	2	1	0	0	0	0
.....................................................................................................................................C-TGGGAGTGCATTTCGTA........................................................................................................................................................................	18	1	35.00	35	0	0	14	19	2	0	0	0	0	0	0
..........................................................................................................................................................GAAGACTAGTGATTTTGTTG..................................................................................................................................................	20	1	34.00	34	17	11	1	0	0	4	1	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTG...............................................................................................................................................	25	1	26.00	26	0	3	20	1	0	1	1	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTC..................................................................................................................................................	22	1	25.00	25	0	2	15	0	1	6	1	0	0	0	0
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTAT......................................................................................................	22	1	24.00	24	0	11	10	3	0	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGGC................................................................................................................................................	24	1	23.00	23	0	0	23	0	0	0	0	0	0	0	0
....................................................................................................................................CC-TGGGAGTGCATTTCGTA........................................................................................................................................................................	19	1	22.00	22	0	0	13	8	0	1	0	0	0	0	0
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTCT.........................................................................................................	20	1	21.00	21	0	1	16	0	1	3	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAC..............................................................................................................................................	26	1	21.00	21	0	0	21	0	0	0	0	0	0	0	0
...........................................................................................................................................................AAGACTAGTGATTTTGTTGTT................................................................................................................................................	21	1	20.00	20	3	3	13	0	0	1	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGG.................................................................................................................................................	23	1	19.00	19	1	1	17	0	0	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGCC................................................................................................................................................	24	1	18.00	18	0	0	18	0	0	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTT......................................................................................................................................................	18	1	17.00	17	0	2	3	0	8	3	0	0	0	0	1

droEre2

T----------------------------GATC-----GTAAC--CCCATCCA-AACTCGTTATT-----------------AACTAAC-----CGA-------------------------TTGGT-C-CTCC-TGGGAGTGTATTCCGTATGGAAGACTAGTGATTTTGTTGTTTGGTCTTTGGTAA---TAACAATAAATCCCTTGTCTTCTTACGGCGTGCATTTG-TGCTCTTCATTC-------T-----ATCGATGGT----------------TAACCAA-TAAAACT------------------------	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTT................................................................................................................................................	24	1	35672.00	35672	9848	6928	1425	827	1745	10790	4109
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTG..................................................................................................................................................	22	1	34348.00	34348	4117	133	3456	332	1738	24569	3
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGT.................................................................................................................................................	23	1	16350.00	16350	3169	957	1040	211	1015	8201	1757
........................................................................................................................................................TGGAAGACTAGTGATTTTGTT...................................................................................................................................................	21	1	10600.00	10600	815	76	1196	40	479	7988	6
........................................................................................................................................................TGGAAGACTAGTGATTTTGT....................................................................................................................................................	20	1	3376.00	3376	141	13	273	15	141	2793	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTT...............................................................................................................................................	25	1	1083.00	1083	274	103	38	16	130	463	59
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTT................................................................................................................................................	23	1	816.00	816	811	5	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTT..................................................................................................................................................	22	1	627.00	627	95	5	115	38	30	344	0
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTCTTA.......................................................................................................	22	1	515.00	515	49	88	2	205	13	156	2
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTC................................................................................................................................................	24	1	492.00	492	3	460	2	0	1	19	7
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTA...............................................................................................................................................	25	1	399.00	399	228	25	3	15	36	92	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTG..................................................................................................................................................	21	1	321.00	321	320	0	0	0	0	1	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGC.................................................................................................................................................	23	1	301.00	301	3	186	5	0	0	107	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAA..............................................................................................................................................	26	1	285.00	285	250	5	1	4	6	19	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGT.................................................................................................................................................	22	1	261.00	261	260	0	0	0	0	1	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGA.................................................................................................................................................	23	1	257.00	257	21	2	18	0	8	208	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTA..................................................................................................................................................	22	1	226.00	226	42	1	16	3	13	151	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAAA.............................................................................................................................................	27	1	201.00	201	196	0	0	0	3	1	1
........................................................................................................................................................TGGAAGACTAGTGATTTTG.....................................................................................................................................................	19	1	179.00	179	45	1	21	0	8	104	0
..............................................................................................................................................................ACTAGTGATTTTGTTGTT................................................................................................................................................	18	1	124.00	124	3	0	0	0	4	11	106
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTA................................................................................................................................................	24	1	96.00	96	21	29	4	1	5	32	4
...............................................................................................................................................................CTAGTGATTTTGTTGTT................................................................................................................................................	17	1	94.00	94	0	0	0	0	0	0	94
.............................................................................................................................................................GACTAGTGATTTTGTTGT.................................................................................................................................................	18	1	80.00	80	0	0	1	0	2	25	52
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTCTT........................................................................................................	21	1	71.00	71	19	3	1	3	4	41	0
...............................................................................................................................................................CTAGTGATTTTGTTGT.................................................................................................................................................	16	1	71.00	71	0	0	0	0	0	0	71
............................................................................................................................................................AGACTAGTGATTTTGTTGTT................................................................................................................................................	20	1	66.00	66	3	0	3	0	2	18	40
...............................................................................................................................................................CTAGTGATTTTGTTG..................................................................................................................................................	15	1	65.00	65	0	0	0	0	0	0	65
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTG................................................................................................................................................	24	1	63.00	63	31	9	0	1	0	11	11
.........................................................................................................................................................GGAAGACTAGTGATTTTGTT...................................................................................................................................................	20	1	62.00	62	61	0	0	0	0	1	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGG.................................................................................................................................................	23	1	62.00	62	4	1	1	0	0	56	0
..........................................................................................................................................................GAAGACTAGTGATTTTGTTGTT................................................................................................................................................	22	1	59.00	59	50	2	1	0	0	6	0
..............................................................................................................................................................ACTAGTGATTTTGTTGT.................................................................................................................................................	17	1	58.00	58	0	0	0	0	0	0	58
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTAA.................................................................................................................................................	23	1	56.00	56	35	0	1	1	0	19	0
..........................................................................................................................................................GAAGACTAGTGATTTTGTTG..................................................................................................................................................	20	1	56.00	56	21	0	1	0	4	30	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTC...............................................................................................................................................	25	1	52.00	52	10	26	1	2	3	9	1
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTA.......................................................................................................	21	1	51.00	51	15	3	2	9	4	18	0
..............................................................................................................................................................ACTAGTGATTTTGTTG..................................................................................................................................................	16	1	50.00	50	0	0	0	0	0	0	50
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTAA...............................................................................................................................................	25	1	46.00	46	39	0	0	1	2	4	0
.......................................................................................................................................................ATGGAAGACTAGTGATTTTGTTGTT................................................................................................................................................	25	1	43.00	43	1	0	0	0	0	2	40
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTAT..............................................................................................................................................	26	1	42.00	42	10	1	0	0	4	4	23
..........................................................................................................................................................GAAGACTAGTGATTTTGTTGT.................................................................................................................................................	21	1	38.00	38	16	0	1	0	5	16	0
........................................................................................................................................................TGGAAGACTAGTGATTTT......................................................................................................................................................	18	1	37.00	37	5	1	2	1	0	28	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTTT..............................................................................................................................................	26	1	34.00	34	7	0	0	0	8	18	1
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTC..................................................................................................................................................	22	1	34.00	34	6	1	2	2	1	22	0
.............................................................................................................................................................GACTAGTGATTTTGTTGTT................................................................................................................................................	19	1	33.00	33	0	0	0	1	3	10	19
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTAAA..............................................................................................................................................	26	1	32.00	32	31	0	0	0	0	1	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTTT...............................................................................................................................................	24	1	28.00	28	28	0	0	0	0	0	0
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTAA......................................................................................................	22	1	26.00	26	5	0	1	0	1	19	0
...................................................................................................................................................................................................CAATAAATCCCTTGTCTTCT.........................................................................................................	20	1	25.00	25	3	2	1	0	3	16	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTGTTG...............................................................................................................................................	25	1	25.00	25	2	0	1	1	1	20	0
............................................................................................................................................................AGACTAGTGATTTTGTTGT.................................................................................................................................................	19	1	25.00	25	0	0	0	0	1	15	9
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTTAA..............................................................................................................................................	25	1	24.00	24	24	0	0	0	0	0	0
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTTAT......................................................................................................	22	1	23.00	23	9	1	0	7	2	4	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTTAAA................................................................................................................................................	24	1	23.00	23	21	0	0	1	0	1	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTTAAA.............................................................................................................................................	26	1	22.00	22	22	0	0	0	0	0	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTC...................................................................................................................................................	21	1	19.00	19	0	9	4	0	0	6	0
...............................................................................................................................................................CTAGTGATTTTGTTGTTT...............................................................................................................................................	18	1	17.00	17	0	0	0	0	1	1	15
...........................................................................................................................................................AAGACTAGTGATTTTGTTG..................................................................................................................................................	19	1	17.00	17	5	0	0	0	1	11	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTGTTA...............................................................................................................................................	24	1	17.00	17	17	0	0	0	0	0	0
............................................................................................................................................................AGACTAGTGATTTTGTTG..................................................................................................................................................	18	1	17.00	17	1	0	0	0	1	10	5
.........................................................................................................................................................GGAAGACTAGTGATTTTGTTT..................................................................................................................................................	21	1	17.00	17	17	0	0	0	0	0	0
.........................................................................................................................................................GGAAGACTAGTGATTTTGT....................................................................................................................................................	19	1	15.00	15	15	0	0	0	0	0	0
..........................................................................................................................................................GAAGACTAGTGATTTTGTT...................................................................................................................................................	19	1	14.00	14	3	0	0	0	1	10	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGTA...................................................................................................................................................	21	1	13.00	13	1	0	1	0	0	11	0
....................................................................................................................................................................................................AATAAATCCCTTGTCTTCTT........................................................................................................	20	1	12.00	12	5	0	2	0	0	5	0
...........................................................................................................................................................AAGACTAGTGATTTTGTTGTT................................................................................................................................................	21	1	12.00	12	4	0	0	0	1	7	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGC....................................................................................................................................................	20	1	10.00	10	0	3	3	1	0	3	0
...........................................................................................................................................................AAGACTAGTGATTTTGTTGT.................................................................................................................................................	20	1	10.00	10	0	0	1	1	0	8	0
........................................................................................................................................................TGGAAGACTAGTGATTTTGA....................................................................................................................................................	20	1	9.00	9	1	0	2	0	0	6	0

dgr-mir-7

scaffold_15245:15782218-15782303 +

Known

Unknown

intron

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-25.1	-25.1	-25.1