dgr-mir-6-5

CAAAATGAGTAATGTTATCAACCGCTGCATAAATTCACCAATGCTATGTTTAACCACAGGGAACTGCTGCTGCTGATATACAACCATATTTATACACGACTATATCACAGTGGCTGTTCTTTTTGGTTGCATCGCCATTTGCAACGATTTGTCAGTGTTTTATTCTATTTTATTTTATG *********************************...(((.((.((((..(((((.(((((((.(((((((.(((((((....................)))))))))))))).))))))).))))))))).))...)))...*********************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V109 male body	M041 female body
......................................................................................................TATCACAGTGGCTGTTCTTTTT.......................................................	22	0	6	2.50	15	5	10
......................................................................................................TATCACAGTGGCTGTTCTTTT........................................................	21	0	6	1.83	11	9	2
......................................................................................................TATCACAGTGGCTGTTCTTT.........................................................	20	0	6	0.33	2	2	0
......................................................................................................TATCACAGTGGCTGGTCTTTT........................................................	21	1	6	0.17	1	1	0
......................................................................................................TATCACTGTGGCTGTTCTTTTT.......................................................	22	1	6	0.17	1	1	0

Species	Coordinate	ID	Type	Alignment
droGri2	scaffold_5621:3485-3663 +	dgr-mir-6-5	Known_mirbase	CAAAAT-G----A---GTAATGTTA-----------------------TC---A------------------ACC--------------G---CT------------------------------------------GCATAAATTC-ACCAA-TGCTATGT--TTAACCACAGGGAACTGCTGCTGCTGATATACAACCA-----TATTTA--------------TACA----CGACTATATCACAGTGGCTGTTCTTTTTGGTTGCATCGCCATT-TGCAACGATTTGTCAGTGTT-TTATTCT----------------ATTTTATTTTAT--G
droVir3	scaffold_12875:4112719-4112919 +	dvi-mir-6-2	Known_mirbase	CGTTGA-T------------------------T---------TCTTAAAT---TGTGAAAATTGAATAAATATTT--------------G---C-------------------------------------------TGACAAATTTCTTATG-TGCTATGT--TTAACCGCAGGGAACTGCTGCTGCTGATATACTGTATAGATT---ATA---------------TCG----ATTCCATATCACAGTGGCTGTTCTTTTTGGTTGCATCGCAATC-CACAACAATTTGTCAGCCG---AAAGTA------CTTTTATTATTAACTAACT--T--G
droMoj3	scaffold_6496:20936079-20936261 -	dmo-mir-6-2	Known_mirbase	CATGAG-C----A-------------------------CA--------------GT---------------ATTC--------------G---C-------------------------------------------AGACATATATCCAGAGAGATTGCGT--TTAACCGCAGGGAACTGCTGCTGCTGATATACTATATG----TATTTGTCA------------GTA-----CTCTATATCACAGTGGCTGTTCTTTTTGGTTGCATCGCAAATAGCCAACAATTTGTC---TGTGAAATAAATCTTGAATA-------GTGTTATCTTAA--G
droWil2	scf2_1100000004514:1651100-1651312 -	dwi-mir-6-2	Known_mirbase	CAACAA-C----A---A---------------CAA--------------------------------------C---------ACATTCA---A-AATATTAACAAAAATATTATTTAGTGAAGTGTTTTT------------------TAAA-GTTTTTGT--TTAACCGCAGGGAACTGTCGCTGCTGATATATA-----TATATTATTGTTATATATAATTTAAAAATGATTTTCTATATCACAGTGGCTGTTCTTTTTGGTTTTACGATCATT-TTCAACAACTTT--ATTTTTAG-ATTTC------TCT-------GTTTTACC-------
dp5	3:12676921-12677086 -	dps-mir-6-2	Known_mirbase	CCAAGG------AAT---CGCGTTG----------------------------------------------------------------------------------------------TGCAGTGCTTCCAGTTACTGACAAATCCCC---G-TGCCGTGTCCCCAACCGCAGGGAACCGCTGCTGCTGATATATTATCCACCCATCTTTG---------------ACA----TTTCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAG-TCCAACGATTTGTCA--------------------------------------------
droPer2	scaffold_2:8906586-8906751 +	dpe-mir-6-3	Known_mirbase	CCAAGG------AAT---CGCGTTG----------------------------------------------------------------------------------------------TGCAGTGCTTCCAGTTACTCACAAATCCCC---G-TGCCGTGTCCCCAACCGCAGGGAACCGCTGCTGCTGATATATTATCCACCCATCTTTG---------------ACA----TTTCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAG-TCCAACGATTTGTCA--------------------------------------------
droAna3	scaffold_13266:9731904-9732095 +	dan-mir-6-2	Known_mirbase	CCAAAC-CCGAGAAT---------GTTCTGTG---ATTT---------------------------------TTC------G-TTATCCG---A-------------------------------------------CGACAAATAT-T---A-TTCCGGTG--TTAGCCCCAGGGAACTGTTGCTGCTGATATATTATTCTCCCAAAAAAA--------------AAAT----CACCTATATCACAGTGGCTGTTCTTTTTGGCTGCACCGACAAG-TTCACCGATTTGTCATTTGTGGCACGCA------TTT-------GTGTCAC-------G
droBip1	scf7180000396427:874856-875020 +			CCAAGACCCAAGAAT---TG----------TG---ATTT---------------------------------TTC------G-CCATCCG-----------------------------------------------ACAGATATTATT---A-TTCCGGTG--TTAACCCCAGGGAACTGTTGCTGCTGATATATTATACTTTC---------------------GAACT-ATCTCCTATATCACAGTGGCTGTTCTTTTTGGTTGCACCGTCAAG-TTCAACAATTTGTCATCTG----------------------------------------
droKik1	scf7180000302679:88778-88945 -			CAAGGC-T----CATTTG------------G----------GTT----------------------------TATATTTTCT-TAGT------G-------------------------------------------TGACAT-TTCTT---C-TACCGTGG--TTAGCCCCAGGGAACTGCTGCTGCTGATATATTATCAA-------------------------GAA----TTTCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAG-TTCAGCGATTTGTCATCAGCG---CG-----------------------GCCTC-AGTG
droFic1	scf7180000454039:847459-847639 -			CAATGT-T--------TT------------T----GTTTTTCTT----------------------------TTC------G-TT--C-GTATC-------------------------------------------TGACAAACATCC---A-TTCCGTTT--TTAACCCTAGGGAACTTCTGCTGCTGATATATTATCGA-------------------------AAA----CTCGTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGTTAAG-TCCAGCGATTTGTCATCTGCGGCACGCA------TTC-------GTGTCTCCTC-AATG
droEle1	scf7180000491201:2013410-2013576 -			CAAAGC-G-GCCAATATT------------T----GTTTTCATT----------------------------TTC------------------C-------------------------------------------CGACAAATACCC---A-TTCCGTTT--TTAACCACAGGGAACTTCTGCTGCTGATATATTATCAA-------------------------AAA----CTTTTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGTCAAG-TCCAGCGATTTGTCATACAGGGAACGGA------TTT-------G--------------
droRho1	scf7180000780066:74180-74339 +			CAAAGC-T--------CT------------A----GTTTTATTT----------------------------TTC------------------C-------------------------------------------TGACAAATACCA---A-GTCTGTTT--TTAACCACAGGGAACTTCTGCTGCTGATATATTATCGA-------------------------AAA----CTTTTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAG-TCCAGCGATTTGTCATCCAGGAAACGCA------TTT-------G--------------
droBia1	scf7180000302143:3059261-3059402 -			CAGACG------------------------------TTTAGTTC----------------------------TCC------------------C-------------------------------------------TGACAAGTATCT---A-TTCCGTTC--TCAACCCCAGGGAACTTCTGCTGCTGATATATTAACTA-------------------------AAG-------CTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATCTGTGG-------------------------------------
droTak1	scf7180000415384:84565-84709 +			CAGTC------------------------------GTTTTAGTT----------------------------TAT------------------C-------------------------------------------TGACAAACACCC---A-TTCCGTTT--TTAACCCCAGGGAACTTCTGCTGCTGATATATTATTGA-------------------------AAA----CTCCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATCTGTGG-------------------------------------
droEug1	scf7180000409474:2397347-2397517 +			TAACAT-C----A---TTC----------------GTTTTGTTT----------------------------TTTGTTT--T-ATAT------T-------------------------------------------TGACAAACAACC---A-TGCCGTTT--TTAACCCCAGGGAACCTCTGCTGTTGATATATAATCAG------------------------GAAA----CTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCATCGATTTGTCATCTGTGGCATGCA------TTT-------G--------------
dm3	chr2R:15548321-15548496 -	dme-mir-6-2	Known_mirbase	CATTAT-T------------------------TAA-------TT--TTT-TTTTTT---------------TTTG-------G-----------C------------------------------------------ACACGAATAACC---A-TGCCGTTT--TTAACCCAAGGGAACTTCTGCTGCTGATATATTATTGA------------------------AAAA----CTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATTTGTGGCACGCA------TTT-------GTGTCACCTC-A--G
droSim2	2r:16195593-16195769 -	dsi-mir-6-2	Known_mirbase	CATTAT-T------------------------TAA-------TT--TACTTTTTTT---------------TTTC-------G-----------C------------------------------------------ACACGAATAACC---A-TGCCGTTT--TTAACCCCAGGGAACTTCTGCTGCTGATATATTATTGA------------------------AAAA----CTCCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATTTGTGGCACGCA------TTT-------GTGTCACCTC-A--G
droSec2	scaffold_1:13063054-13063230 -	dse-mir-6-2	Known_mirbase	CATCAT-T----A---TT--------------TAA-------TT--TACT---TTT---------------TTTT-------G-----------C------------------------------------------ACACGAATAACC---A-TGCCGTTT--TTAACCCCAGGGAACTTCTGCTGCTGATATATTATTGA------------------------AAAA----CTCCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATTTGTGGCACGCA------TTT-------GTGTCACCTC-A--G
droYak3	2R:13624291-13624446 +	dya-mir-6-2	Known_mirbase	CATCAT-T----A---A---------------TAA-------TT--TGT-TGCTTT---------------TTTT-------G-----------C------------------------------------------TCACAAGTAACC---A-TACCGTTT--TTAACCGCAGGGAACCTCTGCTGCTGATATATTATTGA------------------------GAAA----CTTCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATTTGTG--------------------------------------
droEre2	scaffold_4845:9748575-9748747 -	der-mir-6-2	Known_mirbase	CATCAT-T------------------------TTG-------TT--GCCT---TAT---------------TTTG-------G-----------T------------------------------------------GCACGAAAACCC---A-TACCGTTT--TTAACCCCAGGGAACCTCTGCTGCTGATATATTATTGA-------------------------AAA----CTCCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAGCGATTTGTCATTTGTGGCACGCA------TTT-------GTGTCACCTT-G--G

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droGri2

CAAAAT-G----A---GTAATGTTA-----------------------TC---A------------------ACC--------------G---CT------------------------------------------GCATAAATTC-ACCAA-TGCTATGT--TTAACCACAGGGAACTGCTGCTGCTGATATACAACCA-----TATTTA--------------TACA----CGACTATATCACAGTGGCTGTTCTTTTTGGTTGCATCGCCATT-TGCAACGATTTGTCAGTGTT-TTATTCT----------------ATTTTATTTTAT--G	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT...........................................................................	22	6	2.50	15	10	5
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT............................................................................	21	6	1.83	11	2	9
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT.............................................................................	20	6	0.33	2	0	2

droVir3

CGTTGA-T------------------------T---------TCTTAAAT---TGTGAAAATTGAATAAATATTT--------------G---C-------------------------------------------TGACAAATTTCTTATG-TGCTATGT--TTAACCGCAGGGAACTGCTGCTGCTGATATACTGTATAGATT---ATA---------------TCG----ATTCCATATCACAGTGGCTGTTCTTTTTGGTTGCATCGCAATC-CACAACAATTTGTCAGCCG---AAAGTA------CTTTTATTATTAACTAACT--T--G	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells	SRR2096013 Ovary_Strain_9_oxidized	SRR2096014 Ovary_Strain_160_oxidized	SRR2096026 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096038 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096050 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096055 Ovary_Min_43	SRR2096056 Ovary_Min_46	SRR2096057 Ovary_Min_50	SRR2096058 Ovary_Min_98	SRR2096059 Ovary_Min_164	SRR2096060 Ovary_Min_193	SRR2096061 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096072 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096079 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096080 embryo_0-2h from 15to16 day old nondysgenic mothers	SRR2096081 embryo_0-2h from 15to16 day old nondysgenic mothers
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT...........................................................................	22	3	34949.67	104849	0	0	30	29917	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	14	33	193	3128	2523	3385	2842	2463	4757	2479	4868	3020	2055	2357	2021	14	9	0	6143	2	0	6	23	0	1	1566	1399	10448	8	4	4	1	5	0	6093	4242	4274	2250	2272
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT............................................................................	21	3	5932.67	17798	0	0	7	5463	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	14	18	145	124	356	305	338	606	509	1047	845	599	807	645	3	3	0	1979	1	0	4	0	0	8	216	197	622	0	1	0	0	2	0	370	688	662	600	610
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC..........................................................................	23	3	3316.00	9948	0	0	1	3200	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	7	115	95	335	276	182	402	420	777	641	401	506	444	1	1	0	1877	0	0	2	0	1	0	24	35	34	0	0	0	1	0	1	21	46	56	22	21
............................................................................................................................................................................AGGGAACTGCTGCTGCTGATATA..............................................................................................................................................	23	1	1766.00	1766	0	0	0	25	0	0	0	0	0	0	0	1	10	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	58	0	22	73	187	372	0	0	0	0	9	26	18	1	0	0	0	0	0	0	1	0	0	0	0	0	0	30	0	0	0	0	0	22	33	310	0	0	0	0	0	0	219	75	101	58	101
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCC.........................................................................	24	3	570.00	1710	0	0	0	451	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	18	20	49	55	19	49	76	180	126	75	90	60	0	0	0	392	0	0	0	0	0	0	6	2	5	0	1	0	0	0	0	7	15	4	5	3
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT.............................................................................	20	3	518.00	1554	0	0	6	361	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	5	11	10	15	16	18	36	31	66	66	38	44	39	0	0	0	199	0	0	0	0	0	0	27	33	43	0	0	0	0	0	0	36	92	84	137	137
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC...........................................................................	22	3	494.67	1484	0	0	0	1096	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	1	10	13	1	19	18	23	36	16	28	18	0	0	0	151	0	0	1	0	0	0	4	6	9	0	0	0	1	0	1	5	8	9	0	6
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG..........................................................................	23	2	359.00	718	0	0	0	167	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	15	11	15	24	7	27	15	35	22	18	15	12	0	0	0	39	0	0	0	0	0	0	15	13	98	2	0	0	0	0	0	66	42	32	8	19
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA..........................................................................	23	3	179.33	538	0	0	1	64	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	7	10	22	15	17	25	10	13	13	4	7	6	0	0	0	22	0	0	0	0	0	0	14	19	112	0	0	0	0	0	0	54	35	25	18	24
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCCC........................................................................	25	3	126.67	380	0	0	0	27	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	5	12	12	4	4	29	49	53	27	31	19	0	0	0	92	0	0	0	0	0	0	0	0	5	0	0	1	0	0	1	1	0	0	0	0
............................................................................................................................................................................AGGGAACTGCTGCTGCTGATAT...............................................................................................................................................	22	1	92.00	92	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	12	6	0	0	0	0	0	6	4	1	1	1	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	21	0	0	0	0	0	0	12	5	10	3	3
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTT..............................................................................	19	3	50.33	151	0	0	1	18	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	2	1	3	5	6	4	10	9	9	4	0	1	0	17	0	0	1	0	0	0	1	2	6	0	0	0	0	0	0	6	8	2	21	10
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC............................................................................	21	3	35.33	106	0	0	0	98	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	5	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA.........................................................................	24	3	29.33	88	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	2	4	4	1	2	3	1	0	2	0	0	0	0	0	0	0	0	0	0	5	2	19	0	0	0	0	0	1	14	13	3	3	4
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCC..........................................................................	23	3	28.33	85	0	0	1	44	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	1	2	0	3	6	2	3	3	0	0	0	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	1	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA...........................................................................	22	3	26.00	78	0	0	0	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	3	1	2	0	5	1	0	1	2	0	0	0	0	0	0	0	0	0	0	4	2	13	0	0	0	0	0	0	6	7	9	2	4
...................................................................................................................................................................................................CTGTATAGATT---ATA---------------TCG----ATTCCA.................................................................................................	23	1	26.00	26	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	1	5	14	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCT...............................................................................	18	3	21.00	63	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	4	2	1	1	2	2	0	0	0	2	0	0	0	0	0	0	1	0	13	0	0	0	0	0	0	10	2	2	6	8
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC.............................................................................	20	3	17.00	51	0	0	0	50	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG...........................................................................	22	3	16.33	49	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	2	2	0	1	0	0	2	1	0	0	0	6	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0	2	10	0	5	2
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT...........................................................................	21	3	11.33	34	0	0	3	21	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	1	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGG.........................................................................	22	1	11.00	11	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	0	1	1	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC.........................................................................	24	2	9.50	19	0	0	0	18	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCA.........................................................................	24	3	9.00	27	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	1	1	1	2	0	3	2	0	2	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0
...............................................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTTT...........................................................................	23	3	7.67	23	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	3	1	2	1	3	1	2	1	0	0	3	0	1	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0
....................................................................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT...........................................................................	18	3	7.00	21	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	1	0	0	0	0	0	1	0	0	0	0	0	1	1	4	0	0	0	0	0	0	3	1	0	1	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGGT........................................................................	23	1	7.00	7	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	1	0	1	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA.........................................................................	24	2	6.50	13	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	4	0	0	0	0	0	0	0	3	0	1	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCCC.........................................................................	24	3	6.00	18	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	1	1	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
............................................................................................................................................................................AGGGAACTGCTGCTGCTGATATAA.............................................................................................................................................	24	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTC................................................................................	17	3	5.67	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	4	0	0	0	0	0	0	3	0	2	2	2
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG..........................................................................	22	2	5.50	11	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	1	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA..........................................................................	23	3	5.33	16	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	3	1	1	0	0	0	0	0	1	0	2	0	2	1
...................................................................................................................................................CTTATG-TGCTATGT--TTAACCGC.....................................................................................................................................................................	22	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT...........................................................................	20	3	5.00	15	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	1	1	0	2
............................................................................................................................................................................AGGGAACTGCTGCTGCTGATA................................................................................................................................................	21	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAAA.........................................................................	24	3	4.00	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	3	0	0	0	0	0	0	1	1	0	1	2	1
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAC.........................................................................	24	3	3.67	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	1	0	0	0	1	2	0	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................AGGGAACTGCTGCTGCTGATATACTGTATG.......................................................................................................................................	30	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................AGGGAACTGCTGCTGC.....................................................................................................................................................	16	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................AGGGAACTGCTGCTGCTGAT.................................................................................................................................................	20	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT............................................................................	20	3	3.00	9	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1
..................................................................................................................................................TCTTATG-TGCTATGT--TTAACCGC.....................................................................................................................................................................	23	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................TTCTTATG-TGCTATGT--TTAACCGC.....................................................................................................................................................................	24	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................TTATG-TGCTATGT--TTAACCGC.....................................................................................................................................................................	21	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTC..........................................................................	22	3	3.00	9	0	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGG.........................................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGGC........................................................................	23	1	2.00	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
..........................................................................................................................................................................GCAGGGAACTGCTGCTGCTGATA................................................................................................................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1
...........................................................................................................................................................................CAGGGAACTGCTGCTGCTGATATA..............................................................................................................................................	24	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
............................................................................................................................................................................AGGGAACTGCTGCTGCTGA..................................................................................................................................................	19	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT...........................................................................	19	3	2.00	6	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAC..........................................................................	23	3	2.00	6	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................AGGGAACTGCTGCTGCTGATATT..............................................................................................................................................	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT............................................................................	22	3	1.67	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTACC........................................................................	25	3	1.67	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGC.........................................................................	22	2	1.50	3	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTG..........................................................................	21	2	1.50	3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTAC...........................................................................	22	3	1.33	4	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0

droMoj3

CATGAG-C----A-------------------------CA--------------GT---------------ATTC--------------G---C-------------------------------------------AGACATATATCCAGAGAGATTGCGT--TTAACCGCAGGGAACTGCTGCTGCTGATATACTATATG----TATTTGTCA------------GTA-----CTCTATATCACAGTGGCTGTTCTTTTTGGTTGCATCGCAAATAGCCAACAATTTGTC---TGTGAAATAAATCTTGAATA-------GTGTTATCTTAA--G	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT...........................................................................	22	3	175659.67	526979	30	1	0	0	526946	2
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT............................................................................	21	3	71420.67	214262	14	1	0	0	214242	5
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC..........................................................................	23	3	9565.33	28696	6	0	0	0	28690	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT.............................................................................	20	3	5461.67	16385	3	0	0	0	16380	2
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC...........................................................................	22	3	4979.00	14937	1	0	0	0	14936	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC............................................................................	21	3	1153.67	3461	0	0	0	0	3461	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCC.........................................................................	24	3	749.33	2248	0	0	0	0	2248	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG..........................................................................	23	2	623.50	1247	1	0	0	0	1244	2
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC.............................................................................	20	3	612.00	1836	0	0	0	0	1836	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT...........................................................................	21	3	393.67	1181	2	0	0	0	1179	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTT..............................................................................	19	3	276.67	830	0	1	0	0	828	1
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA..........................................................................	23	3	230.33	691	0	0	0	0	691	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGG.........................................................................	22	1	142.00	142	0	0	0	0	142	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT............................................................................	20	3	132.33	397	1	0	0	0	396	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG..........................................................................	22	2	95.50	191	0	0	0	0	191	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT...........................................................................	20	3	89.67	269	0	0	0	0	269	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA...........................................................................	22	3	89.67	269	0	0	0	0	269	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGG.........................................................................	23	1	86.00	86	0	0	0	0	86	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGGT........................................................................	23	1	80.00	80	0	0	0	0	80	0
............................................................................................................................................................................AGGGAACTGCTGCTGCTGATATA..............................................................................................................................................	23	1	75.00	75	0	17	0	0	58	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCC..........................................................................	23	3	68.67	206	0	0	0	0	206	0
...................................................................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT...........................................................................	19	3	65.33	196	0	0	0	0	196	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCCC........................................................................	25	3	53.67	161	0	0	0	0	161	0
....................................................................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT...........................................................................	18	3	47.67	143	0	0	0	0	143	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG............................................................................	21	3	46.67	140	0	0	0	0	140	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGG.........................................................................	24	1	41.00	41	0	0	0	0	41	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC.........................................................................	24	2	34.50	69	0	0	0	0	69	0
...............................................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTT.............................................................................	21	3	31.33	94	0	0	0	0	94	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTT............................................................................	19	3	31.33	94	0	0	0	0	94	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGGC........................................................................	23	1	30.00	30	0	0	0	0	30	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG...........................................................................	22	3	28.67	86	0	0	0	0	86	0
...................................................................................................................................................................................................................................................CACAGTGGCTGTTCTTTT............................................................................	18	3	28.33	85	0	0	0	0	85	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCT...............................................................................	18	3	26.33	79	0	0	0	0	79	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGGTT.......................................................................	24	1	26.00	26	0	0	0	0	26	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTC..........................................................................	22	3	16.00	48	0	0	0	0	48	0
............................................................................................................................................................................AGGGAACTGCTGCTGCTGATAT...............................................................................................................................................	22	1	15.00	15	0	4	0	1	10	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTC..............................................................................	19	3	14.67	44	0	0	0	0	44	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGGTC.......................................................................	24	1	12.00	12	0	0	0	0	12	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTT.............................................................................	19	3	11.00	33	0	0	0	0	33	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTG..........................................................................	21	2	10.50	21	0	0	0	0	21	0
...............................................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT............................................................................	22	3	10.00	30	0	0	0	0	30	0
...................................................................................................................................................................................................................................................CACAGTGGCTGTTCTTTTTC..........................................................................	20	3	9.33	28	0	0	0	0	28	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGC.........................................................................	22	2	9.00	18	0	0	0	0	18	0
............................................................................................................................................................................AGGGAACTGCTGCTGCTGATA................................................................................................................................................	21	1	8.00	8	0	1	0	0	7	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTC...........................................................................	21	3	7.33	22	0	0	0	0	22	0

droWil2

CAACAA-C----A---A---------------CAA--------------------------------------C---------ACATTCA---A-AATATTAACAAAAATATTATTTAGTGAAGTGTTTTT------------------TAAA-GTTTTTGT--TTAACCGCAGGGAACTGTCGCTGCTGATATATA-----TATATTATTGTTATATATAATTTAAAAATGATTTTCTATATCACAGTGGCTGTTCTTTTTGGTTTTACGATCATT-TTCAACAACTTT--ATTTTTAG-ATTTC------TCT-------GTTTTACC-------	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT...........................................................................	22	3	35155.67	105467	0	1807	0	103655	5
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT............................................................................	21	3	8217.00	24651	0	344	1	24304	2
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT.............................................................................	20	3	1168.67	3506	0	59	5	3441	1
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA..........................................................................	23	3	1099.33	3298	0	10	0	3288	0
............................................................................................................................................................................AGGGAACTGTCGCTGCTGATATA..............................................................................................................................................	23	1	333.00	333	0	2	1	330	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTT..............................................................................	19	3	320.00	960	0	6	0	950	4
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA.........................................................................	24	3	217.00	651	0	5	0	646	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA...........................................................................	22	3	189.67	569	0	4	0	565	0
............................................................................................................................................................................AGGGAACTGTCGCTGCTGATAT...............................................................................................................................................	22	1	136.00	136	0	1	0	135	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCT...............................................................................	18	3	128.33	385	0	3	0	382	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG..........................................................................	23	2	83.50	167	0	6	0	161	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT...........................................................................	21	3	70.33	211	0	143	0	68	0
............................................................................................................................................................................AGGGAACTGTCGCTGCTGATA................................................................................................................................................	21	1	62.00	62	0	1	0	61	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAAA........................................................................	25	3	46.00	138	0	0	0	138	0
....................................................................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT...........................................................................	18	3	45.00	135	0	1	0	134	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA..........................................................................	23	3	41.67	125	0	0	0	125	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC...........................................................................	22	3	40.33	121	0	1	0	120	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC..........................................................................	23	3	32.33	97	0	0	0	97	0
............................................................................................................................................................................AGGGAACTGTCGCTGCTGAT.................................................................................................................................................	20	1	19.00	19	0	0	0	19	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG...........................................................................	22	3	18.67	56	0	0	0	56	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT............................................................................	20	3	16.00	48	0	31	0	17	0
............................................................................................................................................................................AGGGAACTGTCGCTGCTGATATAA.............................................................................................................................................	24	1	11.00	11	0	0	0	11	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT...........................................................................	20	3	10.33	31	0	12	0	19	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTA............................................................................	21	3	9.33	28	0	1	0	27	0
...............................................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT............................................................................	22	3	8.67	26	0	0	0	26	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAAA.........................................................................	24	3	7.33	22	0	0	0	22	0
......................................................................................................................................................................................................................................TGATTTTCTATATCACAGTGGC.....................................................................................	22	1	7.00	7	0	0	0	7	0
...................................................................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT...........................................................................	19	3	6.00	18	0	0	0	18	0
...............................................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTT.............................................................................	21	3	4.67	14	0	0	0	14	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC............................................................................	21	3	4.33	13	0	0	0	13	0
.............................................................................................................................................................................GGGAACTGTCGCTGCTGATATA..............................................................................................................................................	22	1	4.00	4	0	0	0	4	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCC.........................................................................	24	3	3.67	11	0	0	0	11	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA.........................................................................	24	2	3.50	7	0	0	0	7	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTAA...........................................................................	22	4	3.25	13	0	0	0	13	0
............................................................................................................................................................................AGGGAACTGTCGCTGCTGATATT..............................................................................................................................................	23	1	3.00	3	0	0	0	3	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTT.............................................................................	19	3	2.67	8	0	7	0	1	0
....................................................................................................................................................................................................................................................ACAGTGGCTGTTCTTTTTA..........................................................................	19	3	2.67	8	0	0	0	8	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG..........................................................................	22	2	2.50	5	0	0	0	5	0
............................................................................................................................................................................AGGGAACTGTCGCTGCTGATATAT.............................................................................................................................................	24	1	2.00	2	0	0	0	2	0
............................................................................................................................................................................AGGGAACTGTCGCTGCTGATATC..............................................................................................................................................	23	1	2.00	2	0	0	0	2	0
.......................................................................................................................................................AA-GTTTTTGT--TTAACCGC.....................................................................................................................................................................	18	1	2.00	2	0	0	0	2	0
................................................................................................................................................................................AACTGTCGCTGCTGATATA..............................................................................................................................................	19	1	2.00	2	0	0	0	2	0
............................................................................................................................................................................AGGGAACTGTCGCTGCTGA..................................................................................................................................................	19	1	2.00	2	0	0	0	2	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTT............................................................................	19	3	2.00	6	0	0	0	6	0
...................................................................................................................................................................................................................................................CACAGTGGCTGTTCTTTT............................................................................	18	3	1.67	5	0	0	0	5	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTAA.........................................................................	22	3	1.33	4	0	0	0	4	0
...............................................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTT..............................................................................	20	3	1.33	4	0	0	0	4	0
...............................................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTTT...........................................................................	23	3	1.33	4	0	2	0	2	0
............................................................................................................................................................................AGGGAACTGTCGCTGCTGATATG..............................................................................................................................................	23	1	1.00	1	0	0	0	1	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG............................................................................	21	3	1.00	3	0	0	0	3	0
.............................................................................................................................................................................GGGAACTGTCGCTGCTGAT.................................................................................................................................................	19	1	1.00	1	0	0	0	1	0
.....................................................................................................................................................................................................................................ATGATTTTCTATATCACAGTGGT.....................................................................................	23	1	1.00	1	0	0	0	1	0
......................................................................................................................................................................................................................................TGATTTTCTATATCACAGTGGT.....................................................................................	22	1	1.00	1	0	0	0	1	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTG..........................................................................	21	2	1.00	2	0	0	0	2	0
.............................................................................................................................................................................GGGAACTGTCGCTGCTGATAT...............................................................................................................................................	21	1	1.00	1	0	1	0	0	0
...................................................................................................................................................................................................................................................CACAGTGGCTGTTCTTTTTGGT........................................................................	22	1	1.00	1	0	0	0	1	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAAC........................................................................	25	3	1.00	3	0	0	0	3	0
...........................................................................................................................................................................................................................................TTCTATATCACAGTGGCTGTTCT...............................................................................	23	1	1.00	1	0	0	0	1	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGG.........................................................................	23	1	1.00	1	0	0	0	1	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGGT........................................................................	23	1	1.00	1	0	0	0	1	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAC.........................................................................	24	3	1.00	3	0	1	0	2	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTGA..........................................................................	23	3	0.67	2	0	0	0	2	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC.............................................................................	20	3	0.67	2	0	0	0	1	1
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTA..........................................................................	21	3	0.67	2	0	0	0	2	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCC..........................................................................	23	3	0.67	2	0	0	0	2	0

dp5

CCAAGG------AAT---CGCGTTG----------------------------------------------------------------------------------------------TGCAGTGCTTCCAGTTACTGACAAATCCCC---G-TGCCGTGTCCCCAACCGCAGGGAACCGCTGCTGCTGATATATTATCCACCCATCTTTG---------------ACA----TTTCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAG-TCCAACGATTTGTCA--------------------------------------------	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT...........................................................................	22	3	38201.33	114604	0	6815	107701	78	3	0	7	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT............................................................................	21	3	6091.00	18273	0	1237	17000	29	2	0	5	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC...........................................................................	22	3	1760.00	5280	0	4	5272	4	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT.............................................................................	20	3	403.00	1209	0	134	1074	1	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG..........................................................................	23	2	249.00	498	0	79	419	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT...........................................................................	21	3	194.00	582	0	505	77	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC............................................................................	21	3	169.33	508	0	2	506	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC..........................................................................	23	3	159.00	477	0	12	464	1	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA..........................................................................	23	3	100.00	300	0	22	277	0	0	0	1	0	0	0
............................................................................................................................................................................AGGGAACCGCTGCTGCTGATATA..............................................................................................................................................	23	1	80.00	80	0	5	48	0	27	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC.............................................................................	20	3	62.00	186	0	0	184	2	0	0	0	0	0	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT............................................................................	20	3	40.00	120	0	106	14	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT............................................................................	22	3	30.33	91	0	7	84	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTT..............................................................................	19	3	27.67	83	0	24	59	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC.........................................................................	24	2	26.50	53	0	0	53	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA...........................................................................	22	3	24.67	74	0	6	68	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT...........................................................................	20	3	17.00	51	0	32	19	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTTT...........................................................................	23	3	13.67	41	0	8	33	0	0	0	0	0	0	0
............................................................................................................................................................................AGGGAACCGCTGCTGCTGATAT...............................................................................................................................................	22	1	13.00	13	0	0	12	0	1	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCC.........................................................................	24	3	10.67	32	0	6	26	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG...........................................................................	22	3	10.33	31	0	9	22	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTT.............................................................................	19	3	8.33	25	0	22	3	0	0	0	0	0	0	0
...................................................................................................................................................................................................TTATCCACCCATCTTTG---------------ACA----TTTCT..................................................................................................	25	1	8.00	8	0	0	5	0	3	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG............................................................................	21	3	8.00	24	0	1	23	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT...........................................................................	19	3	7.67	23	0	10	13	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCT...............................................................................	18	3	7.00	21	0	8	13	0	0	0	0	0	0	0
............................................................................................................................................................................AGGGAACCGCTGCTGCTGATAC...............................................................................................................................................	22	1	6.00	6	0	0	6	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTT.............................................................................	21	3	5.33	16	0	0	16	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT...........................................................................	18	3	5.00	15	0	3	12	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA.........................................................................	24	2	4.50	9	0	0	9	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA.........................................................................	24	3	4.00	12	0	2	10	0	0	0	0	0	0	0
............................................................................................................................................................................AGGGAACCGCTGCTGCTGATA................................................................................................................................................	21	1	4.00	4	0	0	3	0	1	0	0	0	0	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG..........................................................................	22	2	4.00	8	0	7	1	0	0	0	0	0	0	0
............................................................................................................................................................................AGGGAACCGCTGCTGCTGATATC..............................................................................................................................................	23	1	3.00	3	0	0	1	0	0	0	0	0	2	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCC..........................................................................	23	3	3.00	9	0	1	8	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA..........................................................................	23	3	2.00	6	0	2	3	0	0	0	1	0	0	0
................................................................................................................................................TCCCC---G-TGCCGTGTCCCCAACCGC.....................................................................................................................................................................	24	1	2.00	2	0	0	2	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTC...........................................................................	21	3	2.00	6	0	1	5	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGG.........................................................................	24	1	2.00	2	0	1	1	0	0	0	0	0	0	0
............................................................................................................................................................................AGGGAACCGCTGCTGCTGA..................................................................................................................................................	19	1	2.00	2	0	0	0	0	0	0	0	0	2	0
............................................................................................................................................................................AGGGAACCGCTGCTGCTGAT.................................................................................................................................................	20	1	2.00	2	0	0	0	0	1	0	1	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTC..............................................................................	19	3	1.67	5	0	0	5	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTT..............................................................................	18	3	1.67	5	0	5	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTG..........................................................................	21	2	1.50	3	0	1	2	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTCC...........................................................................	22	3	1.33	4	0	0	4	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTC..........................................................................	22	3	1.33	4	0	3	1	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCCC........................................................................	25	3	1.33	4	0	0	4	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTC............................................................................	22	3	1.00	3	0	0	3	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTA............................................................................	21	3	1.00	3	0	0	3	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGGGAA......................................................................	27	1	1.00	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................ATCCCC---G-TGCCGTGTCCCCAACCGC.....................................................................................................................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGGC........................................................................	25	1	1.00	1	0	0	1	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGC.........................................................................	22	2	1.00	2	0	0	2	0	0	0	0	0	0	0
...................................................................................................................................................................................................TTATCCACCCATCTTTG---------------ACA----TTTCTA.................................................................................................	26	1	1.00	1	0	0	0	0	1	0	0	0	0	0
............................................................................................................................................................................AGGGAACCGCTGCTGCTGATATTC.............................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	1	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTAA...........................................................................	22	3	1.00	3	0	0	2	0	0	0	1	0	0	0

droPer2

CCAAGG------AAT---CGCGTTG----------------------------------------------------------------------------------------------TGCAGTGCTTCCAGTTACTCACAAATCCCC---G-TGCCGTGTCCCCAACCGCAGGGAACCGCTGCTGCTGATATATTATCCACCCATCTTTG---------------ACA----TTTCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAG-TCCAACGATTTGTCA--------------------------------------------	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT...........................................................................	22	3	146.00	438	9	413	0	0	1	15
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT............................................................................	21	3	25.00	75	8	62	0	0	0	5
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT...........................................................................	21	3	14.67	44	0	44	0	0	0	0
............................................................................................................................................................................AGGGAACCGCTGCTGCTGATAT...............................................................................................................................................	22	1	12.00	12	10	0	2	0	0	0
............................................................................................................................................................................AGGGAACCGCTGCTGCTGATATA..............................................................................................................................................	23	1	8.00	8	4	0	4	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG..........................................................................	23	2	5.00	10	0	7	0	0	0	3
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT.............................................................................	20	3	5.00	15	6	8	0	0	0	1
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT............................................................................	20	3	3.00	9	0	9	0	0	0	0
............................................................................................................................................................................AGGGAACCGCTGCTGCTGATATAA.............................................................................................................................................	24	1	1.00	1	1	0	0	0	0	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG..........................................................................	22	2	1.00	2	0	2	0	0	0	0
............................................................................................................................................................................AGGGAACCGCTGCTGCTGATA................................................................................................................................................	21	1	1.00	1	0	0	1	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTT..............................................................................	19	3	1.00	3	0	3	0	0	0	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT...........................................................................	20	3	0.67	2	0	2	0	0	0	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGA.........................................................................	22	2	0.50	1	0	1	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG...........................................................................	22	3	0.33	1	0	1	0	0	0	0
...................................................................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT...........................................................................	19	3	0.33	1	0	1	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA..........................................................................	23	3	0.33	1	0	1	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA...........................................................................	22	3	0.33	1	0	1	0	0	0	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTT............................................................................	19	3	0.33	1	0	1	0	0	0	0
...............................................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT............................................................................	22	3	0.33	1	0	1	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC.............................................................................	20	3	0.33	1	1	0	0	0	0	0

droAna3

CCAAAC-CCGAGAAT---------GTTCTGTG---ATTT---------------------------------TTC------G-TTATCCG---A-------------------------------------------CGACAAATAT-T---A-TTCCGGTG--TTAGCCCCAGGGAACTGTTGCTGCTGATATATTATTCTCCCAAAAAAA--------------AAAT----CACCTATATCACAGTGGCTGTTCTTTTTGGCTGCACCGACAAG-TTCACCGATTTGTCATTTGTGGCACGCA------TTT-------GTGTCAC-------G	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT...........................................................................	22	3	15043.33	45130	367	44752	0	0	7	4
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT............................................................................	21	3	3049.33	9148	97	9039	2	0	2	8
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC...........................................................................	22	3	462.00	1386	0	1386	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT.............................................................................	20	3	276.00	828	26	792	0	0	8	2
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC............................................................................	21	3	57.67	173	0	172	0	0	0	1
............................................................................................................................................................................AGGGAACTGTTGCTGCTGATATA..............................................................................................................................................	23	1	43.00	43	0	34	8	0	0	1
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC.............................................................................	20	3	37.00	111	0	111	0	0	0	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT...........................................................................	21	3	35.67	107	40	67	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC..........................................................................	23	3	34.67	104	0	104	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA..........................................................................	23	3	33.67	101	3	98	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTT..............................................................................	19	3	17.33	52	8	39	0	0	2	3
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG..........................................................................	23	2	14.00	28	2	24	0	0	1	1
............................................................................................................................................................................AGGGAACTGTTGCTGCTGATAT...............................................................................................................................................	22	1	12.00	12	0	9	2	1	0	0
...................................................................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT...........................................................................	19	3	8.67	26	0	26	0	0	0	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT...........................................................................	20	3	8.00	24	5	19	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCT...............................................................................	18	3	6.00	18	0	18	0	0	0	0
....................................................................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT...........................................................................	18	3	6.00	18	0	18	0	0	0	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT............................................................................	20	3	6.00	18	7	11	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA...........................................................................	22	3	5.33	16	0	15	0	0	0	1
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG............................................................................	21	3	4.33	13	0	13	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG...........................................................................	22	3	3.33	10	1	9	0	0	0	0
...................................................................................................................................................................................................TTATTCTCCCAAAAAAA--------------AAAT----CACCTA.................................................................................................	27	1	3.00	3	0	3	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA.........................................................................	24	3	3.00	9	1	7	0	0	1	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGT.........................................................................	24	2	2.50	5	0	5	0	0	0	0
............................................................................................................................................................................AGGGAACTGTTGCTGCTGAT.................................................................................................................................................	20	1	2.00	2	0	2	0	0	0	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTT.............................................................................	19	3	2.00	6	3	3	0	0	0	0
............................................................................................................................................................................AGGGAACTGTTGCTGCTGATA................................................................................................................................................	21	1	2.00	2	0	2	0	0	0	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTT............................................................................	19	3	1.67	5	0	5	0	0	0	0
...............................................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT............................................................................	22	3	1.67	5	0	5	0	0	0	0
...................................................................................................................................................................................................TTATTCTCCCAAAAAAA--------------AAAT----CACCT..................................................................................................	26	1	1.00	1	0	1	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTC..............................................................................	19	3	1.00	3	0	3	0	0	0	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTC...........................................................................	21	3	1.00	3	0	3	0	0	0	0
...........................................................................................................................................................................CAGGGAACTGTTGCTGCTGATATA..............................................................................................................................................	24	1	1.00	1	0	1	0	0	0	0
............................................................................................................................................................................AGGGAACTGTTGCTGCTGATAC...............................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
..............................................................................................................................................AATAT-T---A-TTCCGGTG--TTAGCCCC.....................................................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
............................................................................................................................................................................AGGGAACTGTTGCTGCTGATATT..............................................................................................................................................	23	1	1.00	1	0	1	0	0	0	0
...................................................................................................................................................................................................................................................CACAGTGGCTGTTCTTTT............................................................................	18	3	0.67	2	0	2	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTAC...........................................................................	22	3	0.67	2	0	2	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA..........................................................................	23	3	0.67	2	0	2	0	0	0	0
...............................................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTT.............................................................................	21	3	0.67	2	0	2	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA.........................................................................	24	2	0.50	1	0	1	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTGA..........................................................................	23	3	0.33	1	0	1	0	0	0	0

droBip1

CCAAGACCCAAGAAT---TG----------TG---ATTT---------------------------------TTC------G-CCATCCG-----------------------------------------------ACAGATATTATT---A-TTCCGGTG--TTAACCCCAGGGAACTGTTGCTGCTGATATATTATACTTTC---------------------GAACT-ATCTCCTATATCACAGTGGCTGTTCTTTTTGGTTGCACCGTCAAG-TTCAACAATTTGTCATCTG----------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droKik1

CAAGGC-T----CATTTG------------G----------GTT----------------------------TATATTTTCT-TAGT------G-------------------------------------------TGACAT-TTCTT---C-TACCGTGG--TTAGCCCCAGGGAACTGCTGCTGCTGATATATTATCAA-------------------------GAA----TTTCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAG-TTCAGCGATTTGTCATCAGCG---CG-----------------------GCCTC-AGTG	Size	Hit Count	Total Norm	Total
No Reads

droFic1

CAATGT-T--------TT------------T----GTTTTTCTT----------------------------TTC------G-TT--C-GTATC-------------------------------------------TGACAAACATCC---A-TTCCGTTT--TTAACCCTAGGGAACTTCTGCTGCTGATATATTATCGA-------------------------AAA----CTCGTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGTTAAG-TCCAGCGATTTGTCATCTGCGGCACGCA------TTC-------GTGTCTCCTC-AATG	Size	Hit Count	Total Norm	Total
No Reads

droEle1

CAAAGC-G-GCCAATATT------------T----GTTTTCATT----------------------------TTC------------------C-------------------------------------------CGACAAATACCC---A-TTCCGTTT--TTAACCACAGGGAACTTCTGCTGCTGATATATTATCAA-------------------------AAA----CTTTTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGTCAAG-TCCAGCGATTTGTCATACAGGGAACGGA------TTT-------G--------------	Size	Hit Count	Total Norm	Total
No Reads

droRho1

CAAAGC-T--------CT------------A----GTTTTATTT----------------------------TTC------------------C-------------------------------------------TGACAAATACCA---A-GTCTGTTT--TTAACCACAGGGAACTTCTGCTGCTGATATATTATCGA-------------------------AAA----CTTTTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAG-TCCAGCGATTTGTCATCCAGGAAACGCA------TTT-------G--------------	Size	Hit Count	Total Norm	Total
No Reads

droBia1

CAGACG------------------------------TTTAGTTC----------------------------TCC------------------C-------------------------------------------TGACAAGTATCT---A-TTCCGTTC--TCAACCCCAGGGAACTTCTGCTGCTGATATATTAACTA-------------------------AAG-------CTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATCTGTGG-------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CAGTC------------------------------GTTTTAGTT----------------------------TAT------------------C-------------------------------------------TGACAAACACCC---A-TTCCGTTT--TTAACCCCAGGGAACTTCTGCTGCTGATATATTATTGA-------------------------AAA----CTCCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATCTGTGG-------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droEug1

TAACAT-C----A---TTC----------------GTTTTGTTT----------------------------TTTGTTT--T-ATAT------T-------------------------------------------TGACAAACAACC---A-TGCCGTTT--TTAACCCCAGGGAACCTCTGCTGTTGATATATAATCAG------------------------GAAA----CTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCATCGATTTGTCATCTGTGGCATGCA------TTT-------G--------------	Size	Hit Count	Total Norm	Total
No Reads

dm3

CATTAT-T------------------------TAA-------TT--TTT-TTTTTT---------------TTTG-------G-----------C------------------------------------------ACACGAATAACC---A-TGCCGTTT--TTAACCCAAGGGAACTTCTGCTGCTGATATATTATTGA------------------------AAAA----CTACTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATTTGTGGCACGCA------TTT-------GTGTCACCTC-A--G	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT...........................................................................	22	3	20801.00	62403	0	0	0	0	8	1	357	2224	923	525	1	3	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	47	2	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	154	592	112	442	121	6275	93	4304	615	4	1	618	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	97	0	80	0	77	0	123	0	0	0	0	0	0	0	0	6	37004	6481	7	9	13	0	0	60	0	59	0	0	0	0	1	0	0	0	3	17	5	38	4	21	2	5	36	10	4	2	4	3	8	68	269	366	6	8	5	9	13	24	0
............................................................................................................................................................................AGGGAACTTCTGCTGCTGATATA..............................................................................................................................................	23	1	14804.00	14804	0	0	0	0	0	0	109	182	2	5	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	200	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	3566	735	100	54	2204	0	1	0	0	0	4	0	0	4	0	0	0	2	1	9	110	0	14	1	4	543	557	9	0	0	180	12	1	389	0	0	2	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	10	249	676	140	49	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	1	7	1	19	0	0	0	4	0	0	0	0	42	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4567	0	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT............................................................................	21	3	4534.67	13604	0	0	0	0	3	0	46	283	290	234	3	4	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	15	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	33	120	21	35	34	787	18	563	151	0	0	203	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	43	0	28	0	28	0	49	0	0	0	0	0	0	0	0	4	6017	3827	3	1	8	0	0	20	0	16	0	0	0	0	0	0	0	1	4	11	4	20	3	19	2	1	22	7	2	6	8	9	2	86	300	142	3	10	2	15	7	21	0
............................................................................................................................................................................AGGGAACTTCTGCTGCTGATAT...............................................................................................................................................	22	1	2093.00	2093	0	0	0	0	0	0	8	41	5	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	83	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	615	89	156	85	150	1	0	0	0	1	2	0	0	0	0	0	1	0	0	1	2	0	0	0	0	28	49	0	0	0	48	4	0	64	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	21	47	7	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	5	0	4	1	0	0	2	0	0	0	0	20	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	515	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT.............................................................................	20	3	778.67	2336	0	0	0	0	0	0	4	15	18	34	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	14	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	6	41	0	3	5	93	2	76	47	0	1	44	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	17	0	5	0	7	0	5	0	0	0	0	1	0	0	0	4	796	813	4	0	4	0	0	2	0	0	0	0	0	0	0	3	1	0	2	4	0	8	1	11	0	0	15	0	1	1	1	17	4	37	113	17	2	9	2	7	0	9	0
............................................................................................................................................................................AGGGAACTTCTGCTGCTGAT.................................................................................................................................................	20	1	426.00	426	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	402	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTT..............................................................................	19	3	418.33	1255	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	2	0	5	1	1	0	2	0	1	10	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	1	0	3	1	0	0	0	0	0	0	0	0	0	3	846	242	0	1	5	0	0	0	0	1	0	0	0	0	0	1	1	0	0	0	1	0	0	1	0	0	0	0	0	0	0	26	4	12	23	29	5	3	2	3	0	3	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG..........................................................................	23	2	281.00	562	0	0	0	0	0	0	3	12	13	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	2	0	3	2	49	0	14	5	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	329	87	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	3	0	0	0	0	3	0	0	0	0	0	0	3	6	9	0	0	1	1	0	1	0
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................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTA............................................................................	21	3	16.67	50	0	0	0	0	1	0	5	15	13	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................AGGGAACTTCTGCTGCTGATATT..............................................................................................................................................	23	1	16.00	16	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................CC---A-TGCCGTTT--TTAACCCA.....................................................................................................................................................................	19	1	15.00	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC............................................................................	21	3	13.67	41	0	0	0	0	2	0	2	4	2	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	15	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................AAGGGAACTTCTGCTGCTGATA................................................................................................................................................	22	1	12.00	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT............................................................................	22	3	11.67	35	0	0	0	0	0	0	0	10	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	14	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0

droSim2

CATTAT-T------------------------TAA-------TT--TACTTTTTTT---------------TTTC-------G-----------C------------------------------------------ACACGAATAACC---A-TGCCGTTT--TTAACCCCAGGGAACTTCTGCTGCTGATATATTATTGA------------------------AAAA----CTCCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATTTGTGGCACGCA------TTT-------GTGTCACCTC-A--G	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT...........................................................................	22	3	816.00	2448	0	0	79	797	27	222	825	375	53	60	1	3	1	5	0	0	0
............................................................................................................................................................................AGGGAACTTCTGCTGCTGATATA..............................................................................................................................................	23	1	289.00	289	0	0	33	0	0	0	7	0	115	97	0	37	0	0	0	0	0
............................................................................................................................................................................AGGGAACTTCTGCTGCTGATAT...............................................................................................................................................	22	1	186.00	186	0	0	32	1	0	1	1	0	86	44	0	21	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT............................................................................	21	3	162.67	488	1	0	81	119	9	45	124	73	12	15	4	1	0	4	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG..........................................................................	23	2	66.00	132	0	0	8	51	0	2	40	18	7	5	1	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTT..............................................................................	19	3	61.33	184	0	0	2	1	27	135	6	2	6	4	1	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT.............................................................................	20	3	50.67	152	0	0	33	12	3	57	16	14	9	5	2	0	0	1	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA..........................................................................	23	3	50.67	152	0	0	0	1	0	0	90	61	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................AGGGAACTTCTGCTGCTGATA................................................................................................................................................	21	1	49.00	49	0	0	15	0	0	0	0	1	16	11	0	6	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA.........................................................................	24	3	43.33	130	0	0	0	0	0	0	78	52	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCT...............................................................................	18	3	39.00	117	0	0	0	0	6	105	1	4	0	0	1	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................GTGGCTGTTCTTTTT...........................................................................	15	3	18.67	56	0	0	0	0	0	0	0	0	27	28	1	0	0	0	0	0	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT...........................................................................	21	3	18.33	55	0	0	0	55	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGT..................................................................................	15	3	15.00	45	0	0	0	0	0	0	0	0	12	30	2	0	1	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA..........................................................................	23	3	13.33	40	0	0	0	0	0	0	21	19	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAAA.........................................................................	24	3	12.67	38	0	0	0	0	0	0	21	17	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................AGGGAACTTCTGCTGCTGAT.................................................................................................................................................	20	1	8.00	8	0	0	1	0	0	0	0	0	3	2	0	2	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA...........................................................................	22	3	7.33	22	0	0	0	0	0	0	12	8	1	0	1	0	0	0	0	0	0
............................................................................................................................................................................AGGGAACTTCTGCTGCTGATATAA.............................................................................................................................................	24	1	7.00	7	0	0	1	0	0	0	0	0	3	2	0	1	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTT.................................................................................	16	3	2.67	8	0	0	0	0	0	0	1	0	0	5	2	0	0	0	0	0	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT............................................................................	20	3	2.67	8	0	0	0	5	3	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG..........................................................................	22	2	2.50	5	0	0	0	4	0	0	0	1	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................TTATTGA------------------------AAAA----CTCCTA.................................................................................................	17	1	2.00	2	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0
............................................................................................................................................................................AGGGAACTTCTGCTGCTGATATAAA............................................................................................................................................	25	1	2.00	2	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTA............................................................................	21	3	1.33	4	0	0	0	0	0	0	2	2	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT...........................................................................	20	3	1.33	4	0	0	0	3	0	0	1	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA.........................................................................	24	2	1.00	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................AGGGAACTTCTGCTGCTGATATAC.............................................................................................................................................	24	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
............................................................................................................................................................................AGGGAACTTCTGCTGCTGATATATTAT..........................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0
.................................................................................................................................................AACC---A-TGCCGTTT--TTAACCCA.....................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................AGGGAACTTCTGCTGCTGATAA...............................................................................................................................................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................GGAACTTCTGCTGCTGATATA..............................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
.......................................................................................................................................................................................................................................................GTGGCTGTTCTTTTTG..........................................................................	16	2	1.00	2	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0
............................................................................................................................................................................AGGGAACTTCTGCTGCTGATATAT.............................................................................................................................................	24	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGGC........................................................................	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................AGGGAACTTCTGCTGCTGA..................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................AGGGAACTTCTGCTGCTGG..................................................................................................................................................	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................................................................................CAGGGAACTTCTGCTGCTGATAT...............................................................................................................................................	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0
............................................................................................................................................................................AGGGAACTTCTGCTGCTGATATATT............................................................................................................................................	25	1	1.00	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC.............................................................................	20	3	0.67	2	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTA..........................................................................	22	3	0.67	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG............................................................................	21	3	0.67	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT...........................................................................	18	3	0.67	2	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC...........................................................................	22	3	0.67	2	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTAAA..........................................................................	23	4	0.50	2	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC.........................................................................	24	2	0.50	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSec2

CATCAT-T----A---TT--------------TAA-------TT--TACT---TTT---------------TTTT-------G-----------C------------------------------------------ACACGAATAACC---A-TGCCGTTT--TTAACCCCAGGGAACTTCTGCTGCTGATATATTATTGA------------------------AAAA----CTCCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATTTGTGGCACGCA------TTT-------GTGTCACCTC-A--G	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT...........................................................................	22	3	27140.33	81421	1713	14	78922	772
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT............................................................................	21	3	8065.33	24196	227	10	23821	138
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG..........................................................................	23	2	3579.50	7159	101	1	6979	78
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT.............................................................................	20	3	1417.00	4251	23	3	4190	35
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTT..............................................................................	19	3	259.67	779	3	0	757	19
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA..........................................................................	23	3	126.33	379	2	0	368	9
....................................................................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT...........................................................................	18	3	112.00	336	0	0	334	2
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT...........................................................................	21	3	92.00	276	147	0	128	1
............................................................................................................................................................................AGGGAACTTCTGCTGCTGATATA..............................................................................................................................................	23	1	72.00	72	2	0	70	0
............................................................................................................................................................................AGGGAACTTCTGCTGCTGATAT...............................................................................................................................................	22	1	71.00	71	2	0	68	1
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCT...............................................................................	18	3	67.33	202	1	0	196	5
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGA.........................................................................	24	2	54.50	109	1	0	108	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA...........................................................................	22	3	32.33	97	2	0	94	1
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC...........................................................................	22	3	29.00	87	1	0	85	1
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG..........................................................................	22	2	22.50	45	16	0	29	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT...........................................................................	20	3	19.67	59	10	0	48	1
....................................................................................................................................................................................................................................................ACAGTGGCTGTTCTTTTTG..........................................................................	19	2	16.50	33	0	0	33	0
............................................................................................................................................................................AGGGAACTTCTGCTGCTGATA................................................................................................................................................	21	1	16.00	16	0	0	16	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA.........................................................................	24	3	14.00	42	0	0	41	1
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT............................................................................	20	3	11.33	34	23	0	11	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC..........................................................................	23	3	11.00	33	1	0	32	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG...........................................................................	22	3	7.33	22	2	0	20	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGG.........................................................................	24	1	7.00	7	1	0	6	0
...................................................................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT...........................................................................	19	3	6.33	19	2	0	17	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTT............................................................................	19	3	5.33	16	2	0	14	0
............................................................................................................................................................................AGGGAACTTCTGCTGCTGAT.................................................................................................................................................	20	1	5.00	5	0	0	5	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC.........................................................................	24	2	5.00	10	0	0	10	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTA............................................................................	21	3	4.33	13	0	0	13	0
.................................................................................................................................................AACC---A-TGCCGTTT--TTAACCCC.....................................................................................................................................................................	21	1	4.00	4	0	0	4	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC............................................................................	21	3	3.67	11	0	0	11	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTAA..........................................................................	23	3	3.33	10	0	0	10	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGG.........................................................................	23	1	3.00	3	0	0	3	0
...................................................................................................................................................................................................................................................CACAGTGGCTGTTCTTTT............................................................................	18	3	2.33	7	1	0	6	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTT.............................................................................	19	3	2.33	7	5	0	2	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG............................................................................	21	3	2.00	6	2	0	4	0
...............................................................................................................................................ATAACC---A-TGCCGTTT--TTAACCCC.....................................................................................................................................................................	23	1	2.00	2	0	0	2	0
...............................................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT............................................................................	22	3	1.00	3	0	0	3	0
............................................................................................................................................................................AGGGAACTTCTGCTGCTGATATATT............................................................................................................................................	25	1	1.00	1	0	0	1	0
............................................................................................................................................................................AGGGAACTTCTGCTGCTGATATAT.............................................................................................................................................	24	1	1.00	1	0	0	1	0
...................................................................................................................................................................................................................................................CACAGTGGCTGTTCTTTTTG..........................................................................	20	2	1.00	2	1	0	1	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTA..........................................................................	22	3	1.00	3	0	0	3	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGGT........................................................................	24	1	1.00	1	0	0	1	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTA.............................................................................	20	3	1.00	3	0	0	3	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC.............................................................................	20	3	1.00	3	0	0	2	1
............................................................................................................................................................................AGGGAACTTCTGCTGCTGATATAG.............................................................................................................................................	24	1	1.00	1	0	0	1	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTG..........................................................................	21	2	1.00	2	1	0	1	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTAA...........................................................................	22	3	0.67	2	0	0	2	0

droYak3

CATCAT-T----A---A---------------TAA-------TT--TGT-TGCTTT---------------TTTT-------G-----------C------------------------------------------TCACAAGTAACC---A-TACCGTTT--TTAACCGCAGGGAACCTCTGCTGCTGATATATTATTGA------------------------GAAA----CTTCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAACGATTTGTCATTTGTG--------------------------------------	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT...........................................................................	22	3	88528.67	265586	0	234	265335	5	0	0	12	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT............................................................................	21	3	15870.00	47610	0	63	47538	1	0	0	8	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC...........................................................................	22	3	2566.67	7700	0	0	7700	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT.............................................................................	20	3	1006.67	3020	0	15	3003	1	0	0	1	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC............................................................................	21	3	276.00	828	0	0	828	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG..........................................................................	23	2	209.00	418	0	2	416	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC..........................................................................	23	3	165.00	495	0	1	494	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC.............................................................................	20	3	138.33	415	0	0	415	0	0	0	0	0	0	0	0
............................................................................................................................................................................AGGGAACCTCTGCTGCTGATATA..............................................................................................................................................	23	1	120.00	120	0	0	77	43	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT...........................................................................	21	3	92.00	276	0	9	267	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA..........................................................................	23	3	90.33	271	0	2	269	0	0	0	0	0	0	0	0
............................................................................................................................................................................AGGGAACCTCTGCTGCTGATAT...............................................................................................................................................	22	1	71.00	71	0	0	52	18	0	1	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTT..............................................................................	19	3	62.00	186	0	2	184	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT...........................................................................	18	3	47.00	141	0	1	140	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA...........................................................................	22	3	31.33	94	0	0	94	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT...........................................................................	20	3	22.33	67	0	0	67	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC.........................................................................	24	2	21.50	43	0	0	43	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT...........................................................................	19	3	21.00	63	0	1	62	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG............................................................................	21	3	16.67	50	0	0	50	0	0	0	0	0	0	0	0
............................................................................................................................................................................AGGGAACCTCTGCTGCTGATA................................................................................................................................................	21	1	13.00	13	0	0	9	4	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT............................................................................	20	3	12.67	38	0	2	36	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCT...............................................................................	18	3	7.33	22	0	1	21	0	0	0	0	0	0	0	0
............................................................................................................................................................................AGGGAACCTCTGCTGCTGATAC...............................................................................................................................................	22	1	7.00	7	0	0	7	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT............................................................................	22	3	5.67	17	0	0	17	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG...........................................................................	22	3	5.67	17	0	0	17	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTC...........................................................................	21	3	4.67	14	0	0	14	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG..........................................................................	22	2	4.50	9	0	0	9	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGG.........................................................................	22	1	4.00	4	0	0	4	0	0	0	0	0	0	0	0
..................................................................................................................................................ACC---A-TACCGTTT--TTAACCGC.....................................................................................................................................................................	20	1	4.00	4	0	0	3	1	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTGC...........................................................................	22	3	3.00	9	0	0	9	0	0	0	0	0	0	0	0
...................................................................................................................................................................................................................................................CACAGTGGCTGTTCTTTT............................................................................	18	3	2.67	8	0	0	8	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTC..............................................................................	19	3	2.67	8	0	0	8	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTT............................................................................	19	3	2.33	7	0	1	6	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGGTT.......................................................................	24	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTA............................................................................	21	3	2.00	6	0	0	6	0	0	0	0	0	0	0	0
............................................................................................................................................................................AGGGAACCTCTGCTGCTGAT.................................................................................................................................................	20	1	2.00	2	0	0	1	1	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGGT........................................................................	23	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTGG.........................................................................	23	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0
...................................................................................................................................................CC---A-TACCGTTT--TTAACCGC.....................................................................................................................................................................	19	1	2.00	2	0	0	2	0	0	0	0	0	0	0	0

droEre2

CATCAT-T------------------------TTG-------TT--GCCT---TAT---------------TTTG-------G-----------T------------------------------------------GCACGAAAACCC---A-TACCGTTT--TTAACCCCAGGGAACCTCTGCTGCTGATATATTATTGA-------------------------AAA----CTCCTATATCACAGTGGCTGTTCTTTTTGGTTGCACGGCCAAT-TCCAGCGATTTGTCATTTGTGGCACGCA------TTT-------GTGTCACCTT-G--G	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTT...........................................................................	22	3	10965.67	32897	4900	27970	0	5	6	16	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTT............................................................................	21	3	2527.67	7583	713	6863	0	1	5	1	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTC...........................................................................	22	3	198.00	594	9	585	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTT.............................................................................	20	3	195.67	587	75	505	0	1	2	4	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTT...........................................................................	21	3	131.67	395	370	25	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTG..........................................................................	23	2	114.00	228	45	182	0	0	1	0	0
............................................................................................................................................................................AGGGAACCTCTGCTGCTGATATA..............................................................................................................................................	23	1	44.00	44	20	11	0	13	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTC............................................................................	21	3	26.00	78	1	77	0	0	0	0	0
............................................................................................................................................................................AGGGAACCTCTGCTGCTGATAT...............................................................................................................................................	22	1	25.00	25	7	9	0	9	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTC..........................................................................	23	3	19.00	57	1	56	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTA..........................................................................	23	3	18.67	56	16	38	0	0	0	2	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTT............................................................................	20	3	17.33	52	41	11	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTC.............................................................................	20	3	16.33	49	0	48	0	1	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTT..............................................................................	19	3	14.33	43	10	30	0	1	1	1	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTT...........................................................................	20	3	10.67	32	23	9	0	0	0	0	0
............................................................................................................................................................................AGGGAACCTCTGCTGCTGATA................................................................................................................................................	21	1	8.00	8	1	2	0	5	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGC.........................................................................	24	2	5.50	11	0	11	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTA...........................................................................	22	3	5.33	16	6	10	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGG.........................................................................	24	1	3.00	3	3	0	0	0	0	0	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTTG..........................................................................	22	2	2.50	5	2	3	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTG............................................................................	21	3	2.33	7	4	3	0	0	0	0	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTT.............................................................................	19	3	2.00	6	6	0	0	0	0	0	0
..................................................................................................................................................CCC---A-TACCGTTT--TTAACCCC.....................................................................................................................................................................	20	1	2.00	2	0	2	0	0	0	0	0
...................................................................................................................................................................................................................................................CACAGTGGCTGTTCTTTTT...........................................................................	19	3	2.00	6	1	5	0	0	0	0	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTTTGG.........................................................................	22	1	2.00	2	0	2	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTGGCA.......................................................................	26	1	2.00	2	1	1	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTCC.........................................................................	24	3	1.67	5	0	5	0	0	0	0	0
....................................................................................................................................................................................................................................................ACAGTGGCTGTTCTTTTT...........................................................................	18	3	1.33	4	0	4	0	0	0	0	0
...............................................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTT............................................................................	22	3	1.33	4	1	3	0	0	0	0	0
...............................................................................................................................................................................................................................................ATATCACAGTGGCTGTTCTTTTT...........................................................................	23	3	1.33	4	2	2	0	0	0	0	0
............................................................................................................................................................................AGGGAACCTCTGCTGCTGATAC...............................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0	0
..............................................................................................................................................................................GGAACCTCTGCTGCTGATATT..............................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0	0
............................................................................................................................................................................AGGGAACCTCTGCTGCTGAT.................................................................................................................................................	20	1	1.00	1	0	0	0	1	0	0	0
.............................................................................................................................................................................GGGAACCTCTGCTGCTGATATA..............................................................................................................................................	22	1	1.00	1	1	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTCC...........................................................................	22	3	1.00	3	0	3	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCT...............................................................................	18	3	1.00	3	2	1	0	0	0	0	0
.............................................................................................................................................................................GGGAACCTCTGCTGCTGATAT...............................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0	0
...........................................................................................................................................................................CAGGGAACCTCTGCTGCTGATAT...............................................................................................................................................	23	1	1.00	1	1	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTA............................................................................	21	3	1.00	3	0	3	0	0	0	0	0
...................................................................................................................................................................................................................................................CACAGTGGCTGTTCTTTT............................................................................	18	3	0.67	2	0	2	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTTAA.........................................................................	24	3	0.67	2	2	0	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTG...........................................................................	22	3	0.67	2	2	0	0	0	0	0	0
..................................................................................................................................................................................................................................................TCACAGTGGCTGTTCTTTT............................................................................	19	3	0.67	2	0	2	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTACC..........................................................................	23	3	0.67	2	0	2	0	0	0	0	0
................................................................................................................................................................................................................................................TATCACAGTGGCTGTTCTTTTCC..........................................................................	23	3	0.67	2	0	2	0	0	0	0	0
.................................................................................................................................................................................................................................................ATCACAGTGGCTGTTCTTTTG...........................................................................	21	3	0.67	2	2	0	0	0	0	0	0

dgr-mir-6-5

scaffold_5621:3535-3613 +

Known

Unknown

intergenic

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-32.6	-32.1	-31.9