dgr-mir-5-1

AGTGTATATAATATTCCTGATATATGTGTTAAAGTCGTTATGGGTCACTCGCTAAAAGGAACGATCGTTGTGATATGCGTTCATTAAATCGTTACATATCACAGTGATTTTCCTTTATAGCGCGTGCTCTGCCCAAAACTCAACTAACCAGTGTTGAATAACTAGTGAAGAGT *************************************..(((.(((.((((((((((((.(((((((((((((((((..........))...)))))))))))))))))))))).))))).))))))....**************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M041 female body	V109 male body
......................................................AAAGGAACGATCGTTGTGATATG................................................................................................	23	0	2	5.00	10	5	5
................................................................................................TATCACAGTGATTTTCCTTTAT.......................................................	22	0	2	2.00	4	4	0
................................................................................................TATCACAGTGATTTTCCTTTA........................................................	21	0	2	1.50	3	3	0
......................................................AAAGGAACGATCGTTGTGATAT.................................................................................................	22	0	2	1.50	3	2	1
................................................................................................TATCACAGTGATTTTCCTTTATA......................................................	23	0	2	0.50	1	1	0
......................................................AAAGGAACGATCGTTGTGAT...................................................................................................	20	0	2	0.50	1	0	1
......................................................AAAGGAACGATCGTTGTCATATG................................................................................................	23	1	2	0.50	1	0	1
......................................................AAAGGAACGATCGTTGTGATT..................................................................................................	21	1	2	0.50	1	0	1
......................................................AAAGGAACGATCGTTGTGATATGT...............................................................................................	24	1	2	0.50	1	0	1

Species	Coordinate	ID	Type	Alignment
droGri2	scaffold_15112:2108481-2108653 -	dgr-mir-5-1	Known_mirbase	AGTGT------------------------------------------------------------------ATATAATAT-TCCT----------GATATATGTGT-TAA-----AGT---------CG-TTATGGGTCACTCGCTAAAAGGAACGATCGTTGTGATATGCGTTCA-TTAAATCGTTACATATCACAGTGATTTTCCTTTATAGCGCGTGC----TC--TGCCCAAAACTCAACTA-A--------CCAGTGTTG--AA----TA-ACTAG-----T---------------GAAGAGT
droVir3	scaffold_12875:4112412-4112597 +	dvi-mir-5	Known_mirbase	TCTGA--CC--------------------------------------------------------------AT------------ATAT--ATATCTG-------A-TATTCT-CGTATACTATATATA-AATTGGGTCATGCTCTAAAAGGAACGATCGTTGTGATATGCGTTCA-TTA-ACCGTTACATATCACAGTGATTTTCCTTTATAGCGCGTGC--------AGCCCGTAAAGCAACAC-CACATACGATC-----TA----TATCCA-TGTC-TATATA-------GACT------TAAAA
droMoj3	scaffold_6496:20936420-20936608 -	dmo-mir-5	Known_mirbase	ATAATATATATATATACATCTATGAAAAGTTT-------------------TTATGAAAGTTCAAAATGCA----------------------AA----------------CT-CGA-----------T-GAATGGGCCATGCGCTAAAAGGAACGATCGTTGTGATATGCGTTAA-TCG-ACCGTTACATATCACAGTGATTTTCCTTTATAGCGCGTGC----AG-TCCCCCAG---ACTACAA-----TA----------TG---------AATGTG-----AA-----------TATTTATAAGT
droWil2	scf2_1100000004514:1651428-1651591 -	dwi-mir-5	Known_mirbase	GACAT--------------------------------------------CAATAGCAAAGTTCAAGTTTCA----------------------TC-------------GTC---GTTT---------TT-TTCTGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTAGATTC-ACCGTTATATATCACAGTGATTTTCCTTTATAGCGCATGCATGTT--CTGTCCAATA--TATCAA-CAAT-A----------TC--------CA-G-CA------AAG--------------------
dp5	3:12677223-12677400 -	dps-mir-5	Known_mirbase	ACCACAACCACACCCACACCAA------CACCCACACCCACCCTCACATCCAT--------CCCAGTGTCA----------------------TTGAT-------TAGTTCCC-AACT---------TC-CTAGGGGCCATACGCTAAAAGGAACGATCGTTGTGATATGCGTTAA-TTC-ACCGTTACATATCACAGTGATTTTCCTTTATAGCGCATGT----CT-GCGCCCACAGC----------------------------------------------------------------------
droPer2	scaffold_2:8906266-8906449 +	dpe-mir-5	Known_mirbase	ACCACAACCACACCCACACCAACACCAACACCCATACCCACCCTCACATCCAT--------CCCAGTGTCA----------------------TTGAT-------TAGCTCCC-AACT---------TC-CTAGGGGCCATACGCTAAAAGGAACGATCGTTGTGATATGCGTTAA-TTC-ACCGTTACATATCACAGTGATTTTCCTTTATAGCGCATGT----CT-GCGCCCACAGC----------------------------------------------------------------------
droAna3	scaffold_13266:9731630-9731797 +	dan-mir-5	Known_mirbase	TTCAA------------------------------------------------------------------ATGTGACTA-TTCG----------AAAAAAAATGT-AAA-----ATA---------TT-CTAAGGACCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTTA-TCC-CTCGTTACATATCACAGTGATTTTCCTTTATAACGCATGC----AG-TTGTCCAAAATGCATCAA-AAATAA----------C---------GA-GTTA--------GGTG------------ACAGG
droBip1	scf7180000396427:874581-874750 +			ATGAA-----------------------------------------------------------------AATTTAAAAA-ATTA----------AATAAAAAAGT-GAA-----ATA---------TC-CTAAGGACCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTTA-TCC-CTCGTTACATATCACAGTGATTTTCCTTTATAACGCATGT----CA-TTGTCCAAAATTCATCAG-AGAT------------C---------GA-GTTAG-----T-------GACTT-----GAAGG
droKik1	scf7180000302679:89045-89223 -			GATAT---------------------------------------------------------------TCAGG---ATATGTCC-----TAAACCAAG-------T-GATATCTCAAG---------CTAACCAGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTTT-TCC--CCGTTACATATCACAGTGATTTTCCTTTATAGCGCATGT----TC-AAGTCCAAGATTCAACGA-TTG--A---TCAGTTCTA--AG---------GT-TCTA-T---------------GAGCAAG
droFic1	scf7180000454039:847769-847908 -			A-----------------------------------------------------------------------------------------AAGTTTAG-------T-GATTCC-TAAA---------GT-ACACGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTAT-TTA----GTTACATATCACAGTGATTTTCCTTTATAACGCATGT----CG-TTGTCCAAAGCTCATCAA-AGGAAA----------A----------------------------------------AACAT
droEle1	scf7180000491201:2013689-2013851 -			AGCC------------------------------------------------------------------AAT------------ACAAAAAGTTGAG-------T-GAACCC-CGCT---------TA-CTCCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGA-TCC----TTAACATATCACAGTGATTTTCCTTTATAGCGCATGT----CT-GAGCCCAAAACTCATCGATGGGAAA----------TA---------CAATCC-----AA---------------AAACAGT
droRho1	scf7180000780066:73904-74051 +			ATTC------------------------------------------------------------------AAT------------AAAACAAGTTGAG-------T-GATCCC-TACA---------TT-TTCCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGA-TCC----GTTACATATCACAGTGATTTTCCTTTATAGCGCATGT----CT-GAGCCCAATACTCATCGA-GGGAAA----------TA---------A----------------------------------
droBia1	scf7180000302143:3059534-3059678 -			GCCAT--------------------------------------------------------------------------------AAATCAATTTGAG-------T-GATCCC-CACG---------TA-TCTCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGT-TCC----GTTACATATCACAGTGATTTTCCTTTATAGCGCGTGC----ATGAAGCCCAAAGCTCATCAA-GGGAAA----------T---------------------------------------------
droTak1	scf7180000415384:84304-84470 +			AGTG----------------------------------------------------------------------------------AATTAAGTTGAG-------T-GATCCC-AGCA---------TA-ACTCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGT-TCC----GTTACATATCACAGTGATTTTCCTTTATAACGCATGT----CTTAAGCCCCAAAAACATCAA-GGGATA----------TACTATTAACCA-AGTAA-----A---------------ACATAGC
droEug1	scf7180000409474:2397094-2397245 +			C----------------------------------------------------------------------------------------CAAGTTAAG-------T-GTTACC-AAAA---------CT-ACTCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGAGTTCT-TTT----GTTACATATCACAGTGATTTTCCTTTGTAACGCATGT----CTAATGCCCACTATTCATCAA-GGTTAT----------T---------AA-ACTAA-----T---------------ACTCAGT
dm3	chr2R:15548600-15548768 -	dme-mir-5	Known_mirbase	ATT---------------------------------------------------------------------------------------ATGTTAAG-------T-GATCCC-CAAA---------TT-CATCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGAGTTGT-TTC----CTAACATATCACAGTGATTTTCCTTTATAACGCATGT----TTAAAGTCCACAACTCATCAA-GGAAAA----------TG---------AAAGTC-----AAAGTTGGCAGCTTACTTAAACTT
droSim2	2r:16195887-16196049 -	dsi-mir-5	Known_mirbase	AAG-----------------------------------------------------------------TCAAG------------AAATCAAGTTAAG-------T-TATCAC-CAAA---------TT-CATCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGAGTTGT-TCC-----CAACATATCACAGTGATTTTCCTTTATATCGCATGT----TAAAAGTCCACAATTCATCAA-GGAAAA----------TG---------AAAGCC-----A-AGTTGGCA--------------
droSec2	scaffold_1:13063332-13063502 -	dse-mir-5	Known_mirbase	AGGA----------------------------------------------------------------------------------AATCAAGTTAAG-------T-GATCCC-CAAA---------TT-CATCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGAGTTGT-TCC----CGAACATATCACAGTGATTTTCCTTTATAACGCATGT----TTAAAGTCCACAATTCATCAA-GGAAAA----------TT---------A-AGCC-----A-AGTTGGCAGCTTACT-AAACTT
droYak3	2R:13624013-13624190 +	dya-mir-5	Known_mirbase	GGG-----------------------------------------------------------------TCAAG------------AAATCGAGTTAAG-------T-GTTCCC-CCAA---------TT-TAACGGGCCGTTCGCTAAAAGGAACGATCGTTGTGATATGCGTTAT-TCC----CTAACATATCACAGTGATTTTCCTTTATAACGCATGT----ACAAAGTCCACAACTCATCAA-GGGAAA----------TG---------AAAGCC-----AAAGTCGGCATCTCACT-AAGTTT
droEre2	scaffold_4845:9748864-9749024 -	der-mir-5	Known_mirbase	AGCA----------------------------------------------------------------------------------AATCCAGTTAAG-------T-GATCCC-CTAA---------TT-TGACGGGCCGTTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGT-TCC----CTAACATATCACAGTGATTTTCCTTTATAACGCATGT----AAAAAGTCCAAAACTCATCAATGGGAAA----------TG---------AAAGCC-----AAAGTTGCCA--------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droGri2

AGTGT------------------------------------------------------------------ATATAATAT-TCCT----------GATATATGTGT-TAA-----AGT---------CG-TTATGGGTCACTCGCTAAAAGGAACGATCGTTGTGATATGCGTTCA-TTAAATCGTTACATATCACAGTGATTTTCCTTTATAGCGCGTGC----TC--TGCCCAAAACTCAACTA-A--------CCAGTGTTG--AA----TA-ACTAG-----T---------------GAAGAGT	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
...................................................................................................................................................AAAGGAACGATCGTTGTGATATG...........................................................................................................................................	23	2	5.00	10	5	5
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTAT.................................................................................................	22	2	2.00	4	4	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTA..................................................................................................	21	2	1.50	3	3	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATAT............................................................................................................................................	22	2	1.50	3	2	1
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATA................................................................................................	23	2	0.50	1	1	0
...................................................................................................................................................AAAGGAACGATCGTTGTGAT..............................................................................................................................................	20	2	0.50	1	0	1
...................................................................................................................................................AAAGGAACGATCGTTGTGATT.............................................................................................................................................	21	2	0.50	1	0	1
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGT..........................................................................................................................................	24	2	0.50	1	0	1

droVir3

TCTGA--CC--------------------------------------------------------------AT------------ATAT--ATATCTG-------A-TATTCT-CGTATACTATATATA-AATTGGGTCATGCTCTAAAAGGAACGATCGTTGTGATATGCGTTCA-TTA-ACCGTTACATATCACAGTGATTTTCCTTTATAGCGCGTGC--------AGCCCGTAAAGCAACAC-CACATACGATC-----TA----TATCCA-TGTC-TATATA-------GACT------TAAAA	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells	SRR2096013 Ovary_Strain_9_oxidized	SRR2096014 Ovary_Strain_160_oxidized	SRR2096026 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096038 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096050 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096055 Ovary_Min_43	SRR2096056 Ovary_Min_46	SRR2096057 Ovary_Min_50	SRR2096058 Ovary_Min_98	SRR2096059 Ovary_Min_164	SRR2096060 Ovary_Min_193	SRR2096061 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096072 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096079 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096080 embryo_0-2h from 15to16 day old nondysgenic mothers	SRR2096081 embryo_0-2h from 15to16 day old nondysgenic mothers
...................................................................................................................................................AAAGGAACGATCGTTGTGATATG...........................................................................................................................................	23	1	66177.00	66177	29	70	12	13801	3	6	0	1	2	1	1	2	20	291	0	1	0	4	0	2	5	1	2	4	1	0	4	3	2	9	2	6	416	7	541	1536	1882	1570	4	3	10	10	270	4298	2909	3945	2967	2449	4503	2170	3587	1971	1171	1445	1064	9	12	0	2989	3220	47	6	4	0	2	410	431	2426	15	5	9	14	7	6	1861	585	499	280	327
...................................................................................................................................................AAAGGAACGATCGTTGTGATAT............................................................................................................................................	22	1	11567.00	11567	32	56	5	3522	3	5	0	0	1	2	0	1	1	14	3	1	0	4	0	2	4	6	4	3	0	2	3	1	4	1	1	9	60	4	107	196	302	192	1	1	3	4	13	197	128	336	238	266	422	297	573	402	318	346	259	1	1	0	1269	500	21	11	0	1	0	103	123	324	3	2	5	1	2	5	298	162	163	89	128
...................................................................................................................................................AAAGGAACGATCGTTGTGATA.............................................................................................................................................	21	1	6493.00	6493	23	34	1	737	0	1	0	0	0	0	0	0	0	4	0	0	0	0	1	0	0	0	1	0	0	1	1	0	0	0	1	0	6	1	12	20	17	22	0	0	1	6	37	425	294	397	326	300	494	276	517	346	230	281	192	2	1	0	907	71	2	0	0	0	0	30	24	132	7	3	2	4	2	3	131	41	34	39	53
...................................................................................................................................................AAAGGAACGATCGTTGTGAT..............................................................................................................................................	20	1	4656.00	4656	11	35	2	149	0	0	0	3	0	6	2	0	0	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	1	0	0	0	2	2	2	0	1	5	21	29	28	24	98	81	91	163	208	331	368	207	306	244	17	13	2	1834	66	1	3	0	0	0	16	15	19	0	0	1	1	1	2	17	48	39	66	71
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATA................................................................................................	23	1	2561.00	2561	0	0	5	922	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	2	0	0	1	0	0	1	1	1	1	84	0	112	247	407	252	0	0	0	0	2	24	8	20	26	20	30	16	29	12	12	11	6	0	0	0	22	209	0	0	0	0	1	5	3	20	0	0	0	0	0	0	15	11	12	3	1
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTAT.................................................................................................	22	1	2463.00	2463	0	2	9	1029	0	0	0	0	0	0	0	0	0	1	7	3	2	5	5	1	1	4	1	1	4	0	1	0	3	1	1	5	44	2	78	187	147	88	0	0	0	0	1	14	8	17	20	13	29	21	45	24	17	26	17	0	0	0	121	234	1	0	0	0	15	10	13	34	0	0	0	0	0	0	35	53	42	10	11
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGT..........................................................................................................................................	24	1	1002.00	1002	1	1	0	254	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	11	14	5	0	0	2	0	0	19	12	33	35	37	61	44	80	51	34	38	36	0	0	0	122	18	0	0	0	0	0	4	9	11	0	0	0	2	2	0	14	11	18	8	10
...................................................................................................................................................AAAGGAACGATCGTTGTGATATT...........................................................................................................................................	23	1	460.00	460	0	0	0	113	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	7	2	0	0	0	0	0	8	10	10	17	11	31	0	23	7	6	8	6	0	0	0	12	166	0	0	0	0	0	4	1	4	0	0	0	0	0	0	4	3	2	0	0
.................................................................................................................................................TAAAAGGAACGATCGTTGTGAT..............................................................................................................................................	22	1	295.00	295	0	0	0	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	2	16	7	10	25	14	32	28	15	25	22	0	0	0	76	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	2
...................................................................................................................................................AAAGGAACGATCGTTGTGATAC............................................................................................................................................	22	1	282.00	282	0	0	0	279	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGA..........................................................................................................................................	24	1	257.00	257	2	0	0	59	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	2	0	1	3	6	1	0	0	0	0	0	5	1	10	10	6	18	3	14	12	4	8	8	0	0	0	24	6	0	0	0	0	0	5	4	13	0	0	0	0	0	0	7	5	9	4	6
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTAT.................................................................................................	21	1	173.00	173	0	0	1	86	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	6	24	7	9	0	0	0	0	0	1	0	0	1	1	0	2	1	2	4	1	0	0	0	0	4	12	0	0	0	0	0	0	0	1	0	0	0	0	0	0	4	1	1	1	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAA...............................................................................................	24	1	164.00	164	0	0	0	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	11	0	17	25	29	16	0	0	0	0	0	3	0	1	1	1	1	2	2	0	1	1	1	0	0	0	3	7	0	0	0	0	0	2	0	5	0	0	0	0	0	0	0	7	5	1	3
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATA................................................................................................	22	1	129.00	129	0	0	0	46	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	3	0	5	11	17	19	0	0	0	0	0	2	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	14	0	0	0	0	0	0	0	5	0	0	0	0	0	0	2	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATC................................................................................................	23	1	129.00	129	0	0	0	73	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	3	3	7	3	2	4	3	0	0	0	25	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATC...........................................................................................................................................	23	1	127.00	127	0	1	0	32	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	2	0	0	0	0	0	5	1	6	4	5	5	3	11	4	1	2	2	0	0	0	19	16	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................AGGAACGATCGTTGTGATATG...........................................................................................................................................	21	1	105.00	105	0	0	0	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	0	0	0	1	4	14	10	6	2	4	6	1	7	3	1	4	0	0	0	0	2	3	0	0	0	0	0	0	0	8	0	0	0	0	0	0	6	2	2	1	1
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTA..................................................................................................	21	1	97.00	97	0	0	0	36	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	2	1	3	2	0	0	0	0	0	6	5	5	0	3	2	0	3	4	4	1	1	0	0	0	2	15	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGA...............................................................................................................................................	19	1	78.00	78	0	2	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	1	0	0	0	0	0	1	0	4	6	6	2	1	5	2	3	3	5	4	3	1	0	0	13	4	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATA...........................................................................................................................................	23	1	77.00	77	0	2	0	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	2	5	2	0	0	0	0	0	2	2	5	2	4	11	1	1	2	2	1	1	0	0	0	7	3	0	2	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGC..........................................................................................................................................	24	1	75.00	75	0	0	0	57	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	3	0	0	0	0	0	0	0	1	0	0	0	0	0	2	1	1	0	0	0	0	1	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTAC.................................................................................................	22	1	57.00	57	0	0	0	56	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................AAAAGGAACGATCGTTGTGATATG...........................................................................................................................................	24	1	45.00	45	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	5	0	8	1	13	1	5	2	2	0	3	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....................................................................................................................................................AAGGAACGATCGTTGTGATATG...........................................................................................................................................	22	1	40.00	40	0	0	0	15	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	3	3	2	0	0	0	0	0	0	0	2	1	0	2	2	0	0	2	0	0	0	0	0	1	1	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	1	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGAC..............................................................................................................................................	20	1	38.00	38	1	2	0	27	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	2	0	0	1	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGTT.........................................................................................................................................	25	1	34.00	34	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	2	2	3	3	3	2	1	1	3	0	0	0	0	4	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0
.................................................................................................................................................TAAAAGGAACGATCGTTGTGATA.............................................................................................................................................	23	1	31.00	31	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	2	2	1	0	1	3	0	2	1	0	0	0	0	1	1	0	0	0	0	0	0	0	8	0	0	0	0	0	0	2	1	1	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGTC.........................................................................................................................................	25	1	28.00	28	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	1	0	0	2	2	2	3	1	1	0	0	0	0	3	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTT...................................................................................................	20	1	25.00	25	0	0	0	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	0	0	0	0	0	0	0	1	0	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATC.............................................................................................................................................	21	1	22.00	22	0	1	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	2	0	2	0	2	0	0	1	0	0	0	5	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTATA................................................................................................	21	1	17.00	17	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	2	0	0	0	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTAT.................................................................................................	20	1	16.00	16	0	0	1	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	1	1	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAT...............................................................................................	24	1	16.00	16	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	4	2	3	0	0	0	0	0	0	0	1	0	0	1	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAC...............................................................................................	24	1	13.00	13	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGAT.........................................................................................................................................	25	1	13.00	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	2	1	2	1	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGTCC........................................................................................................................................	26	1	12.00	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	2	0	1	1	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAAA..............................................................................................	25	1	12.00	12	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	2	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATCC...............................................................................................	24	1	12.00	12	0	0	1	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGG...............................................................................................................................................	19	1	11.00	11	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	2	0	1	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTAC.................................................................................................	21	1	11.00	11	0	0	0	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATACC...........................................................................................................................................	23	1	10.00	10	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1
...................................................................................................................................................AAAGGAACGATCGTTG..................................................................................................................................................	16	1	10.00	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	1	1	0	0	0	0	1	1	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................AGGAACGATCGTTGTGATA.............................................................................................................................................	19	1	10.00	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	0	1	0	3	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTT....................................................................................................	19	1	10.00	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	1	0	0	0	0	0	0	0	1	0	0	0	2	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATAA............................................................................................................................................	22	1	9.00	9	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0
...............................................................................................................................TA-AATTGGGTCATGCTCTA..................................................................................................................................................................	19	1	9.00	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	0	0	1	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATT.............................................................................................................................................	21	1	8.00	8	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	0	0	0	0	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................AAAAGGAACGATCGTTGTGAT..............................................................................................................................................	21	1	8.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	4	1	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGAA.........................................................................................................................................	25	1	8.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0
..................................................................................................................................................................................................ACAGTGATTTTCCTTTATA................................................................................................	19	1	8.00	8	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATAA...............................................................................................	23	1	8.00	8	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTG................................................................................................................................................	18	1	8.00	8	0	0	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................AGGAACGATCGTTGTGAT..............................................................................................................................................	18	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1
..................................................................................................................................................AAAAGGAACGATCGTTGTGATA.............................................................................................................................................	22	1	7.00	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	1	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTATAA...............................................................................................	22	1	7.00	7	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	1	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGG..........................................................................................................................................	24	1	7.00	7	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..........................................................................................................................................................................CGTTCA-TTA-ACCGTTACA.......................................................................................................................	18	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................AAAAGGAACGATCGTTGTGATAT............................................................................................................................................	23	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	1	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATT................................................................................................	23	1	6.00	6	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATC................................................................................................	22	1	6.00	6	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................ACAGTGATTTTCCTTTAT.................................................................................................	18	1	6.00	6	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................GAACGATCGTTGTGATATG...........................................................................................................................................	19	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATTT..........................................................................................................................................	24	1	5.00	5	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATG.............................................................................................................................................	21	1	5.00	5	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
.....................................................................................................................................................AGGAACGATCGTTGTGATATGT..........................................................................................................................................	22	1	5.00	5	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTA..................................................................................................	20	1	5.00	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................GGAACGATCGTTGTGATATG...........................................................................................................................................	20	1	4.00	4	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0
.................................................................................................................................................................................................CACAGTGATTTTCCTTTATA................................................................................................	20	1	4.00	4	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGTTC........................................................................................................................................	26	1	4.00	4	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

ATAATATATATATATACATCTATGAAAAGTTT-------------------TTATGAAAGTTCAAAATGCA----------------------AA----------------CT-CGA-----------T-GAATGGGCCATGCGCTAAAAGGAACGATCGTTGTGATATGCGTTAA-TCG-ACCGTTACATATCACAGTGATTTTCCTTTATAGCGCGTGC----AG-TCCCCCAG---ACTACAA-----TA----------TG---------AATGTG-----AA-----------TATTTATAAGT	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
...................................................................................................................................................AAAGGAACGATCGTTGTGATATG...........................................................................................................................................	23	1	103385.00	103385	20	8896	6	8	94444	11
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTAT.................................................................................................	22	1	63878.00	63878	23	4805	2	1	59046	1
...................................................................................................................................................AAAGGAACGATCGTTGTGATAT............................................................................................................................................	22	1	62994.00	62994	6	2770	3	1	60204	10
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATA................................................................................................	23	1	57007.00	57007	6	2091	0	0	54910	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATA.............................................................................................................................................	21	1	7688.00	7688	0	376	0	1	7311	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTAT.................................................................................................	21	1	5487.00	5487	1	290	0	0	5196	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATA................................................................................................	22	1	4838.00	4838	0	106	0	0	4732	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATAC............................................................................................................................................	22	1	4143.00	4143	0	3	0	0	4140	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTAC.................................................................................................	22	1	3555.00	3555	0	10	0	0	3545	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATC................................................................................................	23	1	1942.00	1942	2	24	0	0	1916	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGT..........................................................................................................................................	24	1	1743.00	1743	0	81	0	0	1662	0
...................................................................................................................................................AAAGGAACGATCGTTGTGAT..............................................................................................................................................	20	1	1261.00	1261	2	227	0	2	1022	8
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTA..................................................................................................	21	1	1095.00	1095	1	30	0	0	1064	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATT...........................................................................................................................................	23	1	1093.00	1093	0	81	1	0	1011	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAA...............................................................................................	24	1	1051.00	1051	1	108	0	0	942	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGC..........................................................................................................................................	24	1	829.00	829	0	97	0	0	728	4
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGA..........................................................................................................................................	24	1	578.00	578	0	38	1	0	539	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATC...........................................................................................................................................	23	1	468.00	468	0	29	0	0	439	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTAC.................................................................................................	21	1	292.00	292	0	0	0	0	292	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTATA................................................................................................	21	1	260.00	260	0	11	0	0	249	0
....................................................................................................................................................AAGGAACGATCGTTGTGATATG...........................................................................................................................................	22	1	256.00	256	1	4	0	0	251	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAT...............................................................................................	24	1	188.00	188	0	27	0	0	161	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATT................................................................................................	23	1	177.00	177	0	5	0	0	172	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAC...............................................................................................	24	1	173.00	173	0	1	0	0	172	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTAT.................................................................................................	20	1	173.00	173	0	16	0	0	157	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATC................................................................................................	22	1	160.00	160	1	0	0	0	159	0
....................................................................................................................................................AAGGAACGATCGTTGTGATAT............................................................................................................................................	21	1	142.00	142	0	0	0	0	142	0
..................................................................................................................................................................................................ACAGTGATTTTCCTTTAT.................................................................................................	18	1	132.00	132	0	57	0	0	75	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATA...........................................................................................................................................	23	1	130.00	130	0	13	0	0	117	0
...................................................................................................................................................AAAGGAACGATCGTTGTGAC..............................................................................................................................................	20	1	130.00	130	0	0	0	0	130	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGTC.........................................................................................................................................	25	1	113.00	113	1	32	0	0	80	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATAA...............................................................................................	23	1	110.00	110	0	5	0	0	105	0
.................................................................................................................................................................................................CACAGTGATTTTCCTTTAT.................................................................................................	19	1	108.00	108	0	1	0	0	107	0
.................................................................................................................................................................................................CACAGTGATTTTCCTTTATA................................................................................................	20	1	103.00	103	0	0	0	0	103	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTT...................................................................................................	20	1	101.00	101	3	40	0	0	58	0
..................................................................................................................................................................................................ACAGTGATTTTCCTTTATA................................................................................................	19	1	95.00	95	0	27	0	0	68	0
...................................................................................................................................................AAAGGAACGATCGTTGTGA...............................................................................................................................................	19	1	81.00	81	0	2	1	0	78	0
...................................................................................................................................................................................................CAGTGATTTTCCTTTATA................................................................................................	18	1	79.00	79	0	0	0	0	79	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTA..................................................................................................	20	1	79.00	79	0	3	0	0	76	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATG................................................................................................	23	1	53.00	53	0	1	0	0	52	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTATAA...............................................................................................	22	1	52.00	52	0	3	0	0	49	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGTT.........................................................................................................................................	25	1	47.00	47	0	26	0	0	21	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAAA..............................................................................................	25	1	45.00	45	0	3	0	0	42	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATAA............................................................................................................................................	22	1	40.00	40	0	1	0	0	39	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATCC...............................................................................................	24	1	36.00	36	0	0	0	0	36	0
.....................................................................................................................................................AGGAACGATCGTTGTGATATG...........................................................................................................................................	21	1	33.00	33	1	0	0	0	32	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATT................................................................................................	22	1	30.00	30	0	0	0	0	30	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATAC...............................................................................................	23	1	29.00	29	0	0	0	0	29	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATAT...............................................................................................	23	1	28.00	28	0	3	0	0	25	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTAA.................................................................................................	22	1	28.00	28	0	0	0	0	28	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATACC...........................................................................................................................................	23	1	27.00	27	0	1	0	0	26	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGG..........................................................................................................................................	24	1	25.00	25	0	1	0	0	24	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTT....................................................................................................	19	1	24.00	24	0	1	0	0	23	0
....................................................................................................................................................AAGGAACGATCGTTGTGATA.............................................................................................................................................	20	1	21.00	21	0	0	0	0	21	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATT.............................................................................................................................................	21	1	21.00	21	1	1	0	0	19	0
....................................................................................................................A-----------T-GAATGGGCCATGCGCTA..................................................................................................................................................................	19	1	21.00	21	0	5	0	0	16	0

droWil2

GACAT--------------------------------------------CAATAGCAAAGTTCAAGTTTCA----------------------TC-------------GTC---GTTT---------TT-TTCTGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTAGATTC-ACCGTTATATATCACAGTGATTTTCCTTTATAGCGCATGCATGTT--CTGTCCAATA--TATCAA-CAAT-A----------TC--------CA-G-CA------AAG--------------------	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
...................................................................................................................................................AAAGGAACGATCGTTGTGATATG...........................................................................................................................................	23	1	51810.00	51810	38	332	3	51336	101
...................................................................................................................................................AAAGGAACGATCGTTGTGATAT............................................................................................................................................	22	1	23023.00	23023	56	158	7	22698	104
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTAT.................................................................................................	22	1	11546.00	11546	0	196	0	11308	42
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATA................................................................................................	23	1	4116.00	4116	0	115	0	3991	10
...................................................................................................................................................AAAGGAACGATCGTTGTGATA.............................................................................................................................................	21	1	2328.00	2328	41	10	0	2264	13
...................................................................................................................................................AAAGGAACGATCGTTGTGAT..............................................................................................................................................	20	1	1803.00	1803	88	6	8	1665	36
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTAT.................................................................................................	21	1	1381.00	1381	0	30	0	1346	5
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATA................................................................................................	22	1	408.00	408	0	16	0	391	1
...................................................................................................................................................AAAGGAACGATCGTTGTGATATT...........................................................................................................................................	23	1	351.00	351	1	0	1	349	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAA...............................................................................................	24	1	283.00	283	0	10	0	273	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGA..........................................................................................................................................	24	1	276.00	276	1	6	0	269	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGT..........................................................................................................................................	24	1	275.00	275	0	5	0	270	0
...............................................................................................................................TT-TTCTGGGCCATTCGCTA..................................................................................................................................................................	19	1	181.00	181	0	4	0	177	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTT...................................................................................................	20	1	140.00	140	0	1	0	139	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCT.....................................................................................................	18	1	117.00	117	0	0	0	116	1
...................................................................................................................................................AAAGGAACGATCGTTGTGATATC...........................................................................................................................................	23	1	82.00	82	1	1	0	80	0
....................................................................................................................................................AAGGAACGATCGTTGTGATATG...........................................................................................................................................	22	1	79.00	79	0	37	0	42	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTA..................................................................................................	21	1	75.00	75	0	2	0	72	1
...................................................................................................................................................AAAGGAACGATCGTTGTGATATA...........................................................................................................................................	23	1	62.00	62	0	1	0	61	0
...................................................................................................................................................AAAGGAACGATCGTTGTGA...............................................................................................................................................	19	1	49.00	49	1	0	0	48	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGC..........................................................................................................................................	24	1	48.00	48	0	0	0	48	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATAC............................................................................................................................................	22	1	47.00	47	0	0	1	46	0
...................................................................................................................................................AAAGGAACGATCGTTGTG................................................................................................................................................	18	1	46.00	46	0	1	0	45	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAT...............................................................................................	24	1	44.00	44	0	1	0	43	0
....................................................................................................................................................AAGGAACGATCGTTGTGATAT............................................................................................................................................	21	1	31.00	31	0	15	0	15	1
.................................................................................................................................................TAAAAGGAACGATCGTTGTGAT..............................................................................................................................................	22	1	30.00	30	0	0	0	30	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATT................................................................................................	23	1	27.00	27	0	0	0	27	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGTT.........................................................................................................................................	25	1	26.00	26	0	0	0	26	0
..................................................................................................................................................................................................ACAGTGATTTTCCTTTAT.................................................................................................	18	1	24.00	24	0	0	0	24	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTAT.................................................................................................	20	1	22.00	22	0	1	0	21	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTATA................................................................................................	21	1	20.00	20	0	2	0	18	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAAA..............................................................................................	25	1	19.00	19	0	0	0	19	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATAA............................................................................................................................................	22	1	14.00	14	0	0	0	14	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTAC.................................................................................................	22	1	14.00	14	0	0	0	14	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTATAA...............................................................................................	22	1	13.00	13	0	1	0	12	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATAA...............................................................................................	23	1	13.00	13	0	0	0	13	0
.....................................................................................................................T---------TT-TTCTGGGCCATTCGCTA..................................................................................................................................................................	20	1	13.00	13	0	0	0	13	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGAA.........................................................................................................................................	25	1	12.00	12	0	0	0	12	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTATAT...............................................................................................	22	1	12.00	12	0	0	0	12	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATACC...........................................................................................................................................	23	1	11.00	11	0	0	0	11	0
.....................................................................................................................................................AGGAACGATCGTTGTGATATG...........................................................................................................................................	21	1	10.00	10	0	5	0	5	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTT..................................................................................................	21	1	10.00	10	0	0	0	10	0
..................................................................................................................................................................................................ACAGTGATTTTCCTTTATA................................................................................................	19	1	9.00	9	0	0	0	9	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTT...................................................................................................	19	1	8.00	8	0	0	0	8	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTT....................................................................................................	19	1	7.00	7	0	0	0	7	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGG..........................................................................................................................................	24	1	6.00	6	0	0	0	6	0
..........................................................................................................................................................................CGTTAGATTC-ACCGTTATA.......................................................................................................................	19	1	6.00	6	0	0	0	6	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATG.............................................................................................................................................	21	1	6.00	6	0	0	0	6	0
........................................................................................................................................................AACGATCGTTGTGATATG...........................................................................................................................................	18	1	5.00	5	0	1	0	4	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAG...............................................................................................	24	1	5.00	5	0	0	0	5	0
...................................................................................................................................................AAAGGAACGATCGTTGTGAC..............................................................................................................................................	20	1	5.00	5	2	0	0	2	1
...................................................................................................................................................................................................CAGTGATTTTCCTTTATA................................................................................................	18	1	5.00	5	0	0	0	5	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTAA.................................................................................................	22	1	5.00	5	0	2	0	3	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTAT..................................................................................................	21	1	5.00	5	0	1	0	4	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATAT...............................................................................................	23	1	4.00	4	0	0	0	4	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTA..................................................................................................	20	1	4.00	4	0	0	0	4	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGTA.........................................................................................................................................	25	1	4.00	4	0	0	0	4	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGTC.........................................................................................................................................	25	1	4.00	4	0	0	0	4	0
.................................................................................................................................................TAAAAGGAACGATCGTTGTGATA.............................................................................................................................................	23	1	3.00	3	0	0	0	3	0
...................................................................................................................................................AAAGGAACGATCGTTGTT................................................................................................................................................	18	1	3.00	3	0	0	0	3	0
...................................................................................................................................................AAAGGAACGATCGTTGTGT...............................................................................................................................................	19	1	3.00	3	0	0	0	3	0
....................................................................................................................TT---------TT-TTCTGGGCCATTCGCTA..................................................................................................................................................................	21	1	3.00	3	0	0	0	3	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATG................................................................................................	23	1	3.00	3	0	0	0	3	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATTG............................................................................................................................................	22	1	3.00	3	0	0	0	3	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATC.............................................................................................................................................	21	1	3.00	3	1	0	0	2	0
......................................................................................................................................................GGAACGATCGTTGTGATATG...........................................................................................................................................	20	1	2.00	2	1	1	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATAA..........................................................................................................................................	24	1	2.00	2	0	0	0	2	0

dp5

ACCACAACCACACCCACACCAA------CACCCACACCCACCCTCACATCCAT--------CCCAGTGTCA----------------------TTGAT-------TAGTTCCC-AACT---------TC-CTAGGGGCCATACGCTAAAAGGAACGATCGTTGTGATATGCGTTAA-TTC-ACCGTTACATATCACAGTGATTTTCCTTTATAGCGCATGT----CT-GCGCCCACAGC----------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
...................................................................................................................................................AAAGGAACGATCGTTGTGATATG...........................................................................................................................................	23	1	20861.00	20861	2	2642	10780	28	7312	4	2	3	80	8
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTAT.................................................................................................	22	1	11323.00	11323	0	419	7858	4	3041	0	0	0	1	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATA................................................................................................	23	1	10758.00	10758	0	418	8461	4	1872	0	0	0	3	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATAT............................................................................................................................................	22	1	7060.00	7060	1	708	4499	20	1796	0	5	0	23	8
...................................................................................................................................................AAAGGAACGATCGTTGTGATA.............................................................................................................................................	21	1	1461.00	1461	0	92	884	0	454	0	0	0	29	2
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATA................................................................................................	22	1	783.00	783	0	55	589	1	138	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTAC.................................................................................................	22	1	780.00	780	0	0	777	0	3	0	0	0	0	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTAT.................................................................................................	21	1	762.00	762	0	41	524	0	196	0	0	0	0	1
...................................................................................................................................................AAAGGAACGATCGTTGTGATAC............................................................................................................................................	22	1	640.00	640	0	1	634	2	3	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGAT..............................................................................................................................................	20	1	598.00	598	2	26	274	0	265	1	7	0	14	9
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGT..........................................................................................................................................	24	1	570.00	570	0	89	383	1	95	0	0	0	2	0
....................................................................................................................................................AAGGAACGATCGTTGTGATATG...........................................................................................................................................	22	1	268.00	268	0	236	25	0	3	0	0	0	4	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAA...............................................................................................	24	1	260.00	260	0	16	158	0	85	0	0	0	1	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATT...........................................................................................................................................	23	1	224.00	224	1	10	123	1	88	0	0	0	1	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTA..................................................................................................	21	1	202.00	202	0	14	153	1	32	0	0	0	2	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGC..........................................................................................................................................	24	1	139.00	139	0	0	122	0	17	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGA..........................................................................................................................................	24	1	113.00	113	0	17	70	0	25	0	0	0	1	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATC...........................................................................................................................................	23	1	107.00	107	0	1	80	0	18	0	1	0	7	0
....................................................................................................................................................AAGGAACGATCGTTGTGATAT............................................................................................................................................	21	1	82.00	82	0	76	5	0	1	0	0	0	0	0
.................................................................................................................................................TAAAAGGAACGATCGTTGTGAT..............................................................................................................................................	22	1	78.00	78	0	2	43	0	33	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGAC..............................................................................................................................................	20	1	64.00	64	0	0	64	0	0	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTT...................................................................................................	20	1	60.00	60	0	2	8	0	50	0	0	0	0	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTAC.................................................................................................	21	1	60.00	60	0	0	59	0	1	0	0	0	0	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTATA................................................................................................	21	1	59.00	59	0	5	41	0	13	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGA...............................................................................................................................................	19	1	42.00	42	0	2	21	0	13	0	0	0	3	3
...............................................................................................................................TC-CTAGGGGCCATACGCTA..................................................................................................................................................................	19	1	40.00	40	0	4	4	0	32	0	0	0	0	0
..................................................................................................................................................................................................ACAGTGATTTTCCTTTAT.................................................................................................	18	1	38.00	38	0	0	2	0	36	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAC...............................................................................................	24	1	37.00	37	0	0	37	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATA...........................................................................................................................................	23	1	36.00	36	0	0	21	0	15	0	0	0	0	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTAT.................................................................................................	20	1	35.00	35	0	4	16	0	15	0	0	0	0	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTATAA...............................................................................................	22	1	31.00	31	0	2	17	0	12	0	0	0	0	0
.....................................................................................................................................................AGGAACGATCGTTGTGATATG...........................................................................................................................................	21	1	30.00	30	0	23	7	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATACC...........................................................................................................................................	23	1	29.00	29	0	2	18	0	9	0	0	0	0	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATAA...............................................................................................	23	1	28.00	28	0	3	17	0	8	0	0	0	0	0
.................................................................................................................................................TAAAAGGAACGATCGTTGTGATA.............................................................................................................................................	23	1	26.00	26	0	2	11	0	13	0	0	0	0	0
..................................................................................................................................................................................................ACAGTGATTTTCCTTTATA................................................................................................	19	1	26.00	26	0	0	4	0	22	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAT...............................................................................................	24	1	24.00	24	0	2	11	0	11	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATT................................................................................................	23	1	21.00	21	0	0	18	0	3	0	0	0	0	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTA..................................................................................................	20	1	17.00	17	0	4	13	0	0	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATC................................................................................................	23	1	15.00	15	0	1	10	1	3	0	0	0	0	0
.....................................................................................................................T---------TC-CTAGGGGCCATACGCTA..................................................................................................................................................................	20	1	15.00	15	0	0	1	0	14	0	0	0	0	0
....................................................................................................................................................AAGGAACGATCGTTGTGATA.............................................................................................................................................	20	1	14.00	14	0	11	3	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGTT.........................................................................................................................................	25	1	14.00	14	0	0	4	0	8	0	0	0	2	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATAA............................................................................................................................................	22	1	12.00	12	0	1	5	0	3	0	0	0	3	0
....................................................................................................................................................AAGGAACGATCGTTGTGATATGT..........................................................................................................................................	23	1	11.00	11	0	9	2	0	0	0	0	0	0	0
......................................................................................................................................................GGAACGATCGTTGTGATATG...........................................................................................................................................	20	1	10.00	10	0	8	2	0	0	0	0	0	0	0
.................................................................................................................................................TAAAAGGAACGATCGTTGTGAC..............................................................................................................................................	22	1	10.00	10	0	0	10	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATT.............................................................................................................................................	21	1	10.00	10	0	1	6	0	3	0	0	0	0	0
..................................................................................................................................................AAAAGGAACGATCGTTGTGATAT............................................................................................................................................	23	1	9.00	9	0	4	5	0	0	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTT....................................................................................................	19	1	9.00	9	0	0	7	0	2	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAAA..............................................................................................	25	1	9.00	9	0	2	7	0	0	0	0	0	0	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTATAGC..............................................................................................	23	1	8.00	8	0	0	5	0	3	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCT.....................................................................................................	18	1	8.00	8	0	0	3	0	5	0	0	0	0	0
........................................................................................................................................................................TGCGTTAA-TTC-ACCGTTACATA.....................................................................................................................	22	1	7.00	7	0	0	3	0	4	0	0	0	0	0
...................................................................................................................................................................................................CAGTGATTTTCCTTTATA................................................................................................	18	1	7.00	7	0	0	6	0	1	0	0	0	0	0
.................................................................................................................................................................................................CACAGTGATTTTCCTTTAT.................................................................................................	19	1	7.00	7	0	3	0	0	4	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATG................................................................................................	23	1	7.00	7	0	0	5	0	2	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTG................................................................................................................................................	18	1	6.00	6	0	1	1	0	4	0	0	0	0	0
.....................................................................................................................................................AGGAACGATCGTTGTGATAT............................................................................................................................................	20	1	6.00	6	0	4	2	0	0	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTAA.................................................................................................	22	1	6.00	6	0	0	4	0	2	0	0	0	0	0
.................................................................................................................................................................................................CACAGTGATTTTCCTTTATA................................................................................................	20	1	6.00	6	0	0	5	0	1	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATG.............................................................................................................................................	21	1	5.00	5	0	0	4	0	1	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGTC.........................................................................................................................................	25	1	5.00	5	0	1	2	0	1	0	0	0	1	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGG..........................................................................................................................................	24	1	5.00	5	0	1	4	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATTT..........................................................................................................................................	24	1	5.00	5	0	0	2	0	3	0	0	0	0	0

droPer2

ACCACAACCACACCCACACCAACACCAACACCCATACCCACCCTCACATCCAT--------CCCAGTGTCA----------------------TTGAT-------TAGCTCCC-AACT---------TC-CTAGGGGCCATACGCTAAAAGGAACGATCGTTGTGATATGCGTTAA-TTC-ACCGTTACATATCACAGTGATTTTCCTTTATAGCGCATGT----CT-GCGCCCACAGC----------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
...................................................................................................................................................AAAGGAACGATCGTTGTGATAT............................................................................................................................................	22	1	7491.00	7491	6969	35	408	2	66	11
...................................................................................................................................................AAAGGAACGATCGTTGTGATATG...........................................................................................................................................	23	1	6462.00	6462	4645	68	1645	2	85	17
...................................................................................................................................................AAAGGAACGATCGTTGTGATA.............................................................................................................................................	21	1	6180.00	6180	6099	3	71	1	3	3
...................................................................................................................................................AAAGGAACGATCGTTGTGAT..............................................................................................................................................	20	1	3284.00	3284	3195	1	61	3	2	22
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTAT.................................................................................................	22	1	721.00	721	22	47	648	1	2	1
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGT..........................................................................................................................................	24	1	371.00	371	347	4	18	0	2	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATA................................................................................................	23	1	353.00	353	6	41	306	0	0	0
.................................................................................................................................................TAAAAGGAACGATCGTTGTGAT..............................................................................................................................................	22	1	164.00	164	160	0	3	0	1	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGA..........................................................................................................................................	24	1	161.00	161	155	0	6	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGA...............................................................................................................................................	19	1	125.00	125	116	0	8	0	0	1
...................................................................................................................................................AAAGGAACGATCGTTGTGATAC............................................................................................................................................	22	1	70.00	70	68	1	1	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGAC..............................................................................................................................................	20	1	67.00	67	67	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGG..........................................................................................................................................	24	1	63.00	63	63	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATT...........................................................................................................................................	23	1	58.00	58	42	0	13	0	1	2
...................................................................................................................................................AAAGGAACGATCGTTGTGATACC...........................................................................................................................................	23	1	51.00	51	50	0	1	0	0	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTAT.................................................................................................	21	1	46.00	46	3	3	40	0	0	0
.................................................................................................................................................TAAAAGGAACGATCGTTGTGATA.............................................................................................................................................	23	1	42.00	42	37	0	4	0	1	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGC..........................................................................................................................................	24	1	39.00	39	36	0	2	0	1	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATA................................................................................................	22	1	27.00	27	0	5	22	0	0	0
....................................................................................................................................................AAGGAACGATCGTTGTGATATG...........................................................................................................................................	22	1	27.00	27	21	4	2	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATG.............................................................................................................................................	21	1	24.00	24	24	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATAA............................................................................................................................................	22	1	23.00	23	23	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATC...........................................................................................................................................	23	1	21.00	21	15	0	5	0	1	0
...................................................................................................................................................AAAGGAACGATCGTTGTGG...............................................................................................................................................	19	1	20.00	20	20	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATAG............................................................................................................................................	22	1	20.00	20	20	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTA..................................................................................................	21	1	16.00	16	4	4	8	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGTT.........................................................................................................................................	25	1	16.00	16	15	0	1	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTT...................................................................................................	20	1	15.00	15	0	0	15	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAA...............................................................................................	24	1	11.00	11	0	3	7	0	1	0
...................................................................................................................................................AAAGGAACGATCGTTGTGAG..............................................................................................................................................	20	1	11.00	11	11	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATA...........................................................................................................................................	23	1	10.00	10	9	0	1	0	0	0
.....................................................................................................................................................AGGAACGATCGTTGTGATAT............................................................................................................................................	20	1	9.00	9	9	0	0	0	0	0
.....................................................................................................................................................AGGAACGATCGTTGTGATATG...........................................................................................................................................	21	1	9.00	9	8	0	1	0	0	0
..................................................................................................................................................................................................ACAGTGATTTTCCTTTAT.................................................................................................	18	1	9.00	9	0	0	9	0	0	0
.......................................................................................................................................................GAACGATCGTTGTGATAT............................................................................................................................................	18	1	9.00	9	9	0	0	0	0	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTAT.................................................................................................	20	1	8.00	8	0	2	6	0	0	0
.....................................................................................................................................................AGGAACGATCGTTGTGAT..............................................................................................................................................	18	1	8.00	8	8	0	0	0	0	0
......................................................................................................................................................GGAACGATCGTTGTGATATG...........................................................................................................................................	20	1	8.00	8	8	0	0	0	0	0
...............................................................................................................................TC-CTAGGGGCCATACGCTA..................................................................................................................................................................	19	1	7.00	7	0	0	7	0	0	0
....................................................................................................................................................AAGGAACGATCGTTGTGATAT............................................................................................................................................	21	1	6.00	6	3	3	0	0	0	0
..................................................................................................................................................................................................ACAGTGATTTTCCTTTATA................................................................................................	19	1	6.00	6	0	0	6	0	0	0
....................................................................................................................................................AAGGAACGATCGTTGTGATA.............................................................................................................................................	20	1	6.00	6	6	0	0	0	0	0
..................................................................................................................................................AAAAGGAACGATCGTTGTGATAT............................................................................................................................................	23	1	6.00	6	5	0	1	0	0	0
........................................................................................................................................................AACGATCGTTGTGATATG...........................................................................................................................................	18	1	5.00	5	4	1	0	0	0	0
.................................................................................................................................................TAAAAGGAACGATCGTTGTGATAA............................................................................................................................................	24	1	5.00	5	5	0	0	0	0	0
..................................................................................................................................................AAAAGGAACGATCGTTGTGAT..............................................................................................................................................	21	1	5.00	5	5	0	0	0	0	0
......................................................................................................................................................GGAACGATCGTTGTGATAT............................................................................................................................................	19	1	4.00	4	4	0	0	0	0	0
..................................................................................................................................................AAAAGGAACGATCGTTGTGATA.............................................................................................................................................	22	1	4.00	4	3	0	1	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATT.............................................................................................................................................	21	1	3.00	3	2	0	0	0	0	1
.....................................................................................................................................................AGGAACGATCGTTGTGATA.............................................................................................................................................	19	1	3.00	3	3	0	0	0	0	0
.................................................................................................................................................TAAAAGGAACGATCGTTGTGA...............................................................................................................................................	21	1	3.00	3	2	0	1	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATAA..........................................................................................................................................	24	1	3.00	3	3	0	0	0	0	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATAA...............................................................................................	23	1	2.00	2	0	0	2	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTT....................................................................................................	19	1	2.00	2	0	0	2	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGAAA........................................................................................................................................	26	1	2.00	2	2	0	0	0	0	0
....................................................................................................................................................AAGGAACGATCGTTGTGATATGG..........................................................................................................................................	23	1	2.00	2	2	0	0	0	0	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTATAT...............................................................................................	22	1	2.00	2	0	0	2	0	0	0
......................................................................................................................................................GGAACGATCGTTGTGATA.............................................................................................................................................	18	1	2.00	2	2	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAG...............................................................................................	24	1	2.00	2	0	1	1	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATT................................................................................................	23	1	2.00	2	0	1	1	0	0	0
.....................................................................................................................................................AGGAACGATCGTTGTGATATC...........................................................................................................................................	21	1	2.00	2	2	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAT...............................................................................................	24	1	2.00	2	0	1	1	0	0	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTATA................................................................................................	21	1	2.00	2	0	0	2	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGAT.........................................................................................................................................	25	1	2.00	2	2	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATACT...........................................................................................................................................	23	1	2.00	2	2	0	0	0	0	0
....................................................................................................................................................AAGGAACGATCGTTGTGAT..............................................................................................................................................	19	1	2.00	2	2	0	0	0	0	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTT...................................................................................................	19	1	1.00	1	0	0	1	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATC.............................................................................................................................................	21	1	1.00	1	1	0	0	0	0	0

droAna3

TTCAA------------------------------------------------------------------ATGTGACTA-TTCG----------AAAAAAAATGT-AAA-----ATA---------TT-CTAAGGACCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTTA-TCC-CTCGTTACATATCACAGTGATTTTCCTTTATAACGCATGC----AG-TTGTCCAAAATGCATCAA-AAATAA----------C---------GA-GTTA--------GGTG------------ACAGG	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
...................................................................................................................................................AAAGGAACGATCGTTGTGATATG...........................................................................................................................................	23	1	3433.00	3433	140	2558	681	21	20	13
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTAT.................................................................................................	22	1	1891.00	1891	33	1648	199	1	2	8
...................................................................................................................................................AAAGGAACGATCGTTGTGATAT............................................................................................................................................	22	1	1454.00	1454	31	1141	252	7	10	13
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATA................................................................................................	23	1	721.00	721	40	593	87	0	0	1
...................................................................................................................................................AAAGGAACGATCGTTGTGATA.............................................................................................................................................	21	1	243.00	243	2	217	20	0	3	1
...................................................................................................................................................AAAGGAACGATCGTTGTGAT..............................................................................................................................................	20	1	154.00	154	2	105	26	4	11	6
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTAT.................................................................................................	21	1	147.00	147	5	128	13	0	0	1
...................................................................................................................................................AAAGGAACGATCGTTGTGATAC............................................................................................................................................	22	1	117.00	117	0	117	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTAC.................................................................................................	22	1	110.00	110	0	110	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTA..................................................................................................	21	1	64.00	64	0	61	3	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATT...........................................................................................................................................	23	1	64.00	64	1	21	39	0	0	3
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGT..........................................................................................................................................	24	1	64.00	64	2	55	6	1	0	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATA................................................................................................	22	1	54.00	54	6	43	5	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTT...................................................................................................	20	1	23.00	23	2	9	9	0	0	3
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAA...............................................................................................	24	1	23.00	23	0	19	4	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGC..........................................................................................................................................	24	1	19.00	19	0	19	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGA..........................................................................................................................................	24	1	17.00	17	0	13	3	0	1	0
...................................................................................................................................................AAAGGAACGATCGTTGTGAC..............................................................................................................................................	20	1	16.00	16	0	16	0	0	0	0
....................................................................................................................................................AAGGAACGATCGTTGTGATATG...........................................................................................................................................	22	1	13.00	13	10	3	0	0	0	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTAC.................................................................................................	21	1	10.00	10	0	10	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGA...............................................................................................................................................	19	1	9.00	9	0	7	2	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATC...........................................................................................................................................	23	1	8.00	8	0	7	1	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGTT.........................................................................................................................................	25	1	7.00	7	0	4	3	0	0	0
.....................................................................................................................................................AGGAACGATCGTTGTGATATG...........................................................................................................................................	21	1	7.00	7	1	6	0	0	0	0
....................................................................................................................................................AAGGAACGATCGTTGTGATAT............................................................................................................................................	21	1	7.00	7	4	3	0	0	0	0
...............................................................................................................................TT-CTAAGGACCATTCGCTA..................................................................................................................................................................	19	1	6.00	6	0	5	1	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATT................................................................................................	23	1	6.00	6	0	6	0	0	0	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTAT.................................................................................................	20	1	6.00	6	0	6	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATA...........................................................................................................................................	23	1	5.00	5	0	4	1	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTG................................................................................................................................................	18	1	5.00	5	0	3	1	0	0	1
................................................................................................................................................................................................TCACAGTGATTTTCCTTTATA................................................................................................	21	1	5.00	5	2	3	0	0	0	0
..................................................................................................................................................................................................ACAGTGATTTTCCTTTATA................................................................................................	19	1	4.00	4	0	3	1	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATC................................................................................................	23	1	4.00	4	0	4	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTAA.................................................................................................	22	1	4.00	4	0	4	0	0	0	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATAA...............................................................................................	23	1	4.00	4	0	4	0	0	0	0
.................................................................................................................................................................................................CACAGTGATTTTCCTTTAT.................................................................................................	19	1	4.00	4	0	4	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTC...................................................................................................	20	1	3.00	3	0	3	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTT....................................................................................................	19	1	3.00	3	0	1	2	0	0	0
.....................................................................................................................................................AGGAACGATCGTTGTGATAT............................................................................................................................................	20	1	3.00	3	0	3	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATACC...........................................................................................................................................	23	1	3.00	3	0	2	1	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAT...............................................................................................	24	1	3.00	3	0	3	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATG................................................................................................	23	1	2.00	2	0	2	0	0	0	0
.................................................................................................................................................................................................CACAGTGATTTTCCTTTATA................................................................................................	20	1	2.00	2	0	2	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAC...............................................................................................	24	1	2.00	2	0	2	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGTTA........................................................................................................................................	26	1	2.00	2	0	0	2	0	0	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTA..................................................................................................	20	1	2.00	2	0	1	1	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATTA..........................................................................................................................................	24	1	2.00	2	0	0	2	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATAG............................................................................................................................................	22	1	2.00	2	0	0	2	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATAA............................................................................................................................................	22	1	2.00	2	0	2	0	0	0	0
........................................................................................................................................................AACGATCGTTGTGATATG...........................................................................................................................................	18	1	2.00	2	0	0	2	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGAT.........................................................................................................................................	25	1	2.00	2	0	0	0	0	0	2
.................................................................................................................................................TAAAAGGAACGATCGTTGTGAT..............................................................................................................................................	22	1	2.00	2	0	1	1	0	0	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTT...................................................................................................	19	1	2.00	2	1	1	0	0	0	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTATAA...............................................................................................	22	1	2.00	2	0	2	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTGC.................................................................................................	22	1	1.00	1	0	1	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATT.............................................................................................................................................	21	1	1.00	1	0	0	0	1	0	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATATT..............................................................................................	24	1	1.00	1	0	1	0	0	0	0
....................................................................................................................TA---------TT-CTAAGGACCATTCGCTA..................................................................................................................................................................	21	1	1.00	1	0	1	0	0	0	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATT................................................................................................	22	1	1.00	1	0	1	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTC..................................................................................................	21	1	1.00	1	0	0	1	0	0	0

droBip1

ATGAA-----------------------------------------------------------------AATTTAAAAA-ATTA----------AATAAAAAAGT-GAA-----ATA---------TC-CTAAGGACCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTTA-TCC-CTCGTTACATATCACAGTGATTTTCCTTTATAACGCATGT----CA-TTGTCCAAAATTCATCAG-AGAT------------C---------GA-GTTAG-----T-------GACTT-----GAAGG	Size	Hit Count	Total Norm	Total
No Reads

droKik1

GATAT---------------------------------------------------------------TCAGG---ATATGTCC-----TAAACCAAG-------T-GATATCTCAAG---------CTAACCAGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTTT-TCC--CCGTTACATATCACAGTGATTTTCCTTTATAGCGCATGT----TC-AAGTCCAAGATTCAACGA-TTG--A---TCAGTTCTA--AG---------GT-TCTA-T---------------GAGCAAG	Size	Hit Count	Total Norm	Total
No Reads

droFic1

A-----------------------------------------------------------------------------------------AAGTTTAG-------T-GATTCC-TAAA---------GT-ACACGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTAT-TTA----GTTACATATCACAGTGATTTTCCTTTATAACGCATGT----CG-TTGTCCAAAGCTCATCAA-AGGAAA----------A----------------------------------------AACAT	Size	Hit Count	Total Norm	Total
No Reads

droEle1

AGCC------------------------------------------------------------------AAT------------ACAAAAAGTTGAG-------T-GAACCC-CGCT---------TA-CTCCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGA-TCC----TTAACATATCACAGTGATTTTCCTTTATAGCGCATGT----CT-GAGCCCAAAACTCATCGATGGGAAA----------TA---------CAATCC-----AA---------------AAACAGT	Size	Hit Count	Total Norm	Total
No Reads

droRho1

ATTC------------------------------------------------------------------AAT------------AAAACAAGTTGAG-------T-GATCCC-TACA---------TT-TTCCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGA-TCC----GTTACATATCACAGTGATTTTCCTTTATAGCGCATGT----CT-GAGCCCAATACTCATCGA-GGGAAA----------TA---------A----------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droBia1

GCCAT--------------------------------------------------------------------------------AAATCAATTTGAG-------T-GATCCC-CACG---------TA-TCTCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGT-TCC----GTTACATATCACAGTGATTTTCCTTTATAGCGCGTGC----ATGAAGCCCAAAGCTCATCAA-GGGAAA----------T---------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

AGTG----------------------------------------------------------------------------------AATTAAGTTGAG-------T-GATCCC-AGCA---------TA-ACTCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGT-TCC----GTTACATATCACAGTGATTTTCCTTTATAACGCATGT----CTTAAGCCCCAAAAACATCAA-GGGATA----------TACTATTAACCA-AGTAA-----A---------------ACATAGC	Size	Hit Count	Total Norm	Total
No Reads

droEug1

C----------------------------------------------------------------------------------------CAAGTTAAG-------T-GTTACC-AAAA---------CT-ACTCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGAGTTCT-TTT----GTTACATATCACAGTGATTTTCCTTTGTAACGCATGT----CTAATGCCCACTATTCATCAA-GGTTAT----------T---------AA-ACTAA-----T---------------ACTCAGT	Size	Hit Count	Total Norm	Total
No Reads

dm3

ATT---------------------------------------------------------------------------------------ATGTTAAG-------T-GATCCC-CAAA---------TT-CATCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGAGTTGT-TTC----CTAACATATCACAGTGATTTTCCTTTATAACGCATGT----TTAAAGTCCACAACTCATCAA-GGAAAA----------TG---------AAAGTC-----AAAGTTGGCAGCTTACTTAAACTT	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
...................................................................................................................................................AAAGGAACGATCGTTGTGATATG...........................................................................................................................................	23	1	1000024.00	1000024	0	0	0	0	9	0	182	1884	576	116	3	0	1	2	0	0	0	0	0	0	4	0	8	0	0	8	2	0	1	0	0	0	0	0	1601	9	33	4	14	10	3	13	50	1	29	13	31	3	12	12	32	8	30	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	28552	5412	8050	9218	2656	0	3	3	3	2	16	1	2	41	2	0	29	20	13	21	111	0	14	0	11	416	438	11	0	0	2980	131	1	1308	3	9	12	0	1	0	9	9	32	0	1	0	0	0	0	0	0	0	0	3	1	7	0	0	8361	65167	65329	16740	2572	113	26	17	19	60	29	18	44	30	3	13	2	1	0	1	17	0	9	6	1	0	26	57	0	11	0	0	9	11	0	6	1	9	3	16	1	17	2	12	2	0	42	7	5	7	71	0	2	0	1	0	6	84	1	128	5	36	12	56	8	23	0	9	0	0	0	16	26	13	43	23	7	17	34	136	27	174	39	2237	15	962	172	16	27	130	0	0	0	0	21143	10650	8	2	2	0	4	7	3	2	3	0	56	7	3	2	3	6	172	9	3	2	10	5	13	8	3	7	12	9	37	5	14	3	37	201	7	44	29	189	23	176	9	15	15	23	22	38	19	26	25	671914	62515	66	84	134	7	16	100	36	132	23	31	9	10	7	51	72	178	120	15	32	184	25	57	10	25	116	38	17	8	12	52	11	137	507	2410	16	43	11	10	10	24	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATAT............................................................................................................................................	22	1	136122.00	136122	0	0	0	0	3	1	54	861	318	184	4	0	1	0	0	0	0	0	0	0	0	2	5	0	0	2	3	0	1	0	0	0	0	0	1026	0	3	1	1	0	1	8	16	0	21	5	4	3	4	0	10	4	6	0	27	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	5	3	3	0	14815	1631	5732	6372	793	2	2	4	6	9	4	1	2	15	1	1	63	21	19	38	57	0	13	1	13	130	135	0	0	0	1574	206	1	680	0	3	2	0	0	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	3	2	0	0	394	1989	2152	2265	396	80	4	1	5	11	18	4	7	11	3	2	0	1	0	1	2	0	0	6	0	0	21	44	0	11	1	0	24	11	0	5	1	6	2	25	6	15	0	0	22	0	73	1	7	4	11	0	0	0	1	0	6	98	0	31	0	4	1	59	12	5	2	24	0	0	0	36	20	10	17	20	8	12	23	155	23	134	36	1563	13	911	453	46	52	283	0	0	0	0	4424	3866	3	2	2	2	5	0	2	1	5	2	14	0	1	0	0	5	58	0	1	1	4	0	5	2	0	5	4	7	30	4	6	4	35	222	4	33	22	164	10	127	7	10	13	7	11	10	11	8	8	64342	13732	26	13	50	4	12	42	15	44	11	8	3	3	3	45	23	42	47	16	9	108	22	27	8	14	61	10	13	6	12	36	8	126	482	810	7	31	6	11	16	6	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATA................................................................................................	23	1	47228.00	47228	0	0	0	0	2	0	52	527	178	24	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	0	5	11	0	1	39	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	1	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	1	12351	2521	4507	2620	1220	8	1	0	4	1	13	1	0	4	0	0	9	3	3	8	59	0	3	1	8	206	310	9	1	1	1954	88	4	503	0	3	5	0	0	0	3	5	10	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	243	658	749	1033	56	3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	15	38	0	9	4	2	9	13	0	5	0	3	0	15	1	0	0	0	1	0	31	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	1	0	0	0	0	39	65	12	120	18	396	17	881	5	0	1	10	0	0	0	0	287	189	1	0	0	0	0	0	0	0	0	0	6	0	0	1	0	2	19	1	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	0	0	0	3	0	1	1	0	0	0	0	1	0	1	0	14681	174	1	1	4	0	0	3	0	1	0	0	0	0	16	3	2	1	0	1	0	1	0	0	0	0	1	0	0	0	0	2	0	2	8	38	1	1	0	1	1	0	0
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...............................................................................................................................TT-CATCGGGCCATTCGCTACTG...............................................................................................................................................................	22	1	117.00	117	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	117	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATAA............................................................................................................................................	22	1	108.00	108	0	0	0	0	0	0	5	22	10	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	1	4	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	2	0	1	2	0	0	1	0	0	0	0	3	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16	5	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................ATATCACAGTGATTTTCCTTTATA................................................................................................	24	1	107.00	107	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	30	4	15	11	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	37	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................ACAGTGATTTTCCTTTAT.................................................................................................	18	1	100.00	100	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	17	31	7	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	3	0	0	0	0	0	0	0	0	4	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGATC........................................................................................................................................	26	1	94.00	94	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	48	46	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATC.............................................................................................................................................	21	1	76.00	76	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	4	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	36	20	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTAT.................................................................................................	20	1	76.00	76	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	21	0	7	21	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	10	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droSim2

AAG-----------------------------------------------------------------TCAAG------------AAATCAAGTTAAG-------T-TATCAC-CAAA---------TT-CATCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGAGTTGT-TCC-----CAACATATCACAGTGATTTTCCTTTATATCGCATGT----TAAAAGTCCACAATTCATCAA-GGAAAA----------TG---------AAAGCC-----A-AGTTGGCA--------------	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
...................................................................................................................................................AAAGGAACGATCGTTGTGATATG...........................................................................................................................................	23	1	153742.00	153742	94	63	54838	118	0	0	1087	414	50744	40006	31	5824	125	397	0	0	1
...................................................................................................................................................AAAGGAACGATCGTTGTGATAT............................................................................................................................................	22	1	122204.00	122204	87	64	53472	53	1	3	320	123	31001	34192	32	1991	140	695	7	3	20
...................................................................................................................................................AAAGGAACGATCGTTGTGATA.............................................................................................................................................	21	1	36713.00	36713	105	32	28658	5	0	11	32	19	3673	3823	3	239	6	103	0	0	4
...................................................................................................................................................AAAGGAACGATCGTTGTGAT..............................................................................................................................................	20	1	10151.00	10151	198	41	8774	3	0	1	8	7	444	314	2	318	3	36	0	0	2
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATA................................................................................................	23	1	4563.00	4563	0	0	71	43	1	7	41	8	1502	1439	0	1451	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTAT.................................................................................................	22	1	3927.00	3927	0	0	75	41	1	7	3	0	718	697	0	2377	0	5	0	3	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGA..........................................................................................................................................	24	1	1342.00	1342	1	0	880	1	0	0	2	2	197	232	0	24	0	3	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGT..........................................................................................................................................	24	1	1338.00	1338	1	3	956	1	0	0	2	0	132	214	0	26	0	3	0	0	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATA................................................................................................	22	1	927.00	927	0	0	3	4	0	2	4	0	327	463	0	124	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATAC............................................................................................................................................	22	1	851.00	851	1	1	803	0	0	0	0	0	21	19	0	2	0	4	0	0	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTAT.................................................................................................	21	1	808.00	808	0	0	8	6	1	3	0	0	252	228	0	309	1	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATT...........................................................................................................................................	23	1	712.00	712	0	0	326	0	0	0	3	3	152	126	0	40	0	62	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGG..........................................................................................................................................	24	1	347.00	347	0	1	345	0	0	0	0	0	0	1	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGA...............................................................................................................................................	19	1	321.00	321	8	1	209	0	0	5	3	0	31	37	3	11	0	13	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGAC..............................................................................................................................................	20	1	278.00	278	6	0	271	0	0	0	0	0	0	0	0	1	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATC...........................................................................................................................................	23	1	247.00	247	0	0	99	0	0	0	0	0	62	69	1	16	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGC..........................................................................................................................................	24	1	222.00	222	0	0	113	0	0	0	3	1	55	39	0	9	0	2	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATA...........................................................................................................................................	23	1	218.00	218	0	0	96	0	0	0	2	0	50	49	0	8	4	9	0	0	0
.................................................................................................................................................TAAAAGGAACGATCGTTGTGAT..............................................................................................................................................	22	1	217.00	217	0	0	162	0	0	0	3	0	22	24	0	6	0	0	0	0	0
.................................................................................................................................................TAAAAGGAACGATCGTTGTGATA.............................................................................................................................................	23	1	182.00	182	0	0	69	0	0	0	1	1	49	62	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATAG............................................................................................................................................	22	1	180.00	180	1	0	176	0	0	0	0	0	0	1	0	1	0	1	0	0	0
...............................................................................................................................TT-CATCGGGCCATTCGCTA..................................................................................................................................................................	19	1	159.00	159	0	1	149	0	0	0	1	0	0	1	0	7	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAA...............................................................................................	24	1	152.00	152	0	0	10	1	0	0	2	0	34	40	0	65	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATAA............................................................................................................................................	22	1	121.00	121	1	2	81	0	0	0	1	0	10	11	0	1	1	13	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATG.............................................................................................................................................	21	1	116.00	116	0	0	107	0	0	0	1	0	1	6	0	1	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATACC...........................................................................................................................................	23	1	111.00	111	0	0	95	0	0	0	0	0	11	3	0	2	0	0	0	0	0
....................................................................................................................................................AAGGAACGATCGTTGTGATATG...........................................................................................................................................	22	1	93.00	93	0	0	33	14	0	0	0	0	31	14	0	1	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTT...................................................................................................	20	1	79.00	79	0	0	0	0	0	0	1	0	20	17	0	41	0	0	0	0	0
....................................................................................................................................................AAGGAACGATCGTTGTGATAT............................................................................................................................................	21	1	70.00	70	0	0	25	12	0	0	0	0	15	17	0	1	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGG...............................................................................................................................................	19	1	69.00	69	0	0	68	0	0	0	0	0	1	0	0	0	0	0	0	0	0
....................................................................................................................................................................................................AGTGATTTTCCTTTATA................................................................................................	17	1	67.00	67	0	0	0	0	0	0	0	0	49	18	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGAG..............................................................................................................................................	20	1	65.00	65	0	0	65	0	0	0	0	0	0	0	0	0	0	0	0	0	0
........................................................................................................................................................AACGATCGTTGTGATATG...........................................................................................................................................	18	1	56.00	56	0	0	41	0	0	0	0	0	6	8	1	0	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTA..................................................................................................	21	1	47.00	47	0	0	4	1	0	3	1	0	3	4	0	30	0	1	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATTT..........................................................................................................................................	24	1	33.00	33	0	0	0	0	0	0	1	0	1	1	0	0	0	30	0	0	0
.......................................................................................................................................................GAACGATCGTTGTGATAT............................................................................................................................................	18	1	29.00	29	0	0	24	0	0	0	0	0	1	4	0	0	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTT....................................................................................................	19	1	29.00	29	0	0	0	0	1	2	0	0	3	21	0	2	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTG................................................................................................................................................	18	1	26.00	26	0	0	2	0	0	1	0	0	11	11	0	1	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGAA.........................................................................................................................................	25	1	26.00	26	0	0	13	0	0	0	0	0	6	7	0	0	0	0	0	0	0
.....................................................................................................................................................AGGAACGATCGTTGTGATAT............................................................................................................................................	20	1	25.00	25	0	0	16	1	0	0	0	0	3	5	0	0	0	0	0	0	0
......................................................................................................................................................GGAACGATCGTTGTGATATG...........................................................................................................................................	20	1	23.00	23	0	0	8	1	0	0	0	0	6	8	0	0	0	0	0	0	0
.....................................................................................................................................................AGGAACGATCGTTGTGATATG...........................................................................................................................................	21	1	23.00	23	0	0	9	0	0	0	0	0	7	7	0	0	0	0	0	0	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTATA................................................................................................	21	1	21.00	21	0	0	2	0	0	1	0	0	7	5	0	6	0	0	0	0	0
..................................................................................................................................................................................................ACAGTGATTTTCCTTTATA................................................................................................	19	1	20.00	20	0	0	0	0	0	0	0	0	0	3	0	17	0	0	0	0	0
..................................................................................................................................................AAAAGGAACGATCGTTGTGATAT............................................................................................................................................	23	1	19.00	19	0	0	11	0	0	0	0	0	5	3	0	0	0	0	0	0	0
.......................................................................................................................................................GAACGATCGTTGTGATATG...........................................................................................................................................	19	1	19.00	19	0	0	6	0	0	0	0	0	4	8	0	1	0	0	0	0	0
..................................................................................................................................................................................................ACAGTGATTTTCCTTTAT.................................................................................................	18	1	18.00	18	0	0	0	0	0	0	0	0	0	0	0	18	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGTT.........................................................................................................................................	25	1	18.00	18	0	0	14	0	0	0	0	0	0	1	0	3	0	0	0	0	0
......................................................................................................................................................GGAACGATCGTTGTGATAT............................................................................................................................................	19	1	16.00	16	0	0	12	0	0	0	0	0	2	2	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGAT.........................................................................................................................................	25	1	15.00	15	0	0	13	0	0	0	0	0	0	0	0	1	0	1	0	0	0
....................................................................................................................................................AAGGAACGATCGTTGTGATA.............................................................................................................................................	20	1	14.00	14	0	0	12	0	0	0	0	0	1	1	0	0	0	0	0	0	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATAA...............................................................................................	23	1	14.00	14	0	0	1	0	0	0	0	1	4	5	0	3	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTT...................................................................................................................................................	15	1	14.00	14	0	0	0	0	0	0	0	1	6	7	0	0	0	0	0	0	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTAT.................................................................................................	20	1	13.00	13	0	0	0	0	0	0	0	0	2	4	0	7	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATAAA...........................................................................................................................................	23	1	12.00	12	0	2	4	0	0	0	0	0	3	1	0	0	0	2	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCT.....................................................................................................	18	1	11.00	11	0	0	0	0	0	3	0	0	1	1	0	6	0	0	0	0	0
........................................................................................................................................................AACGATCGTTGTGATAT............................................................................................................................................	17	1	11.00	11	0	0	0	0	0	0	0	0	3	6	2	0	0	0	0	0	0
.....................................................................................................................................................AGGAACGATCGTTGTGAT..............................................................................................................................................	18	1	11.00	11	0	0	11	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAAA..............................................................................................	25	1	10.00	10	0	0	1	1	0	0	0	0	2	2	0	4	0	0	0	0	0
....................................................................................................................................................AAGGAACGATCGTTGTGAT..............................................................................................................................................	19	1	10.00	10	0	0	9	0	0	0	0	0	0	0	0	1	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTG..................................................................................................................................................	16	1	10.00	10	0	0	0	0	0	0	0	0	4	5	1	0	0	0	0	0	0
...................................................................................................................................................................................................CAGTGATTTTCCTTTATA................................................................................................	18	1	9.00	9	0	0	0	0	0	0	0	0	2	7	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATT.............................................................................................................................................	21	1	9.00	9	0	0	7	0	0	0	0	0	0	1	0	0	0	1	0	0	0
.....................................................................................................................................................................................................GTGATTTTCCTTTATA................................................................................................	16	1	8.00	8	0	0	0	0	0	0	0	0	6	2	0	0	0	0	0	0	0
......................................................................................................................................................GGAACGATCGTTGTGATA.............................................................................................................................................	18	1	8.00	8	0	0	3	0	0	0	0	0	1	4	0	0	0	0	0	0	0
....................................................................................................................................................................................................AGTGATTTTCCTTTAT.................................................................................................	16	1	8.00	8	0	0	0	0	0	0	0	0	8	0	0	0	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATC................................................................................................	23	1	7.00	7	0	0	0	0	0	0	0	0	1	0	0	6	0	0	0	0	0
.....................................................................................................................................................AGGAACGATCGTTGTGATA.............................................................................................................................................	19	1	7.00	7	0	0	6	0	0	0	0	0	0	1	0	0	0	0	0	0	0
..................................................................................................................................................AAAAGGAACGATCGTTGTGAT..............................................................................................................................................	21	1	7.00	7	0	0	6	0	0	0	0	0	0	1	0	0	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATT................................................................................................	23	1	6.00	6	0	0	0	0	0	0	0	0	1	0	0	5	0	0	0	0	0
.....................................................................................................................A---------TT-CATCGGGCCATTCGCTA..................................................................................................................................................................	20	1	6.00	6	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTA..................................................................................................	20	1	6.00	6	0	0	0	1	0	1	0	0	0	1	0	3	0	0	0	0	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTATAA...............................................................................................	22	1	6.00	6	0	0	0	0	0	0	0	0	3	2	0	1	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAT...............................................................................................	24	1	6.00	6	0	0	0	0	0	0	0	0	1	1	0	4	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGTC.........................................................................................................................................	25	1	5.00	5	0	0	4	0	0	0	0	0	0	1	0	0	0	0	0	0	0

droSec2

AGGA----------------------------------------------------------------------------------AATCAAGTTAAG-------T-GATCCC-CAAA---------TT-CATCGGGCCATTCGCTAAAAGGAACGATCGTTGTGATATGAGTTGT-TCC----CGAACATATCACAGTGATTTTCCTTTATAACGCATGT----TTAAAGTCCACAATTCATCAA-GGAAAA----------TT---------A-AGCC-----A-AGTTGGCAGCTTACT-AAACTT	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
...................................................................................................................................................AAAGGAACGATCGTTGTGATATG...........................................................................................................................................	23	1	28672.00	28672	392	15	27808	457
...................................................................................................................................................AAAGGAACGATCGTTGTGATAT............................................................................................................................................	22	1	7289.00	7289	95	22	6980	192
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTAT.................................................................................................	22	1	1700.00	1700	86	1	1594	19
...................................................................................................................................................AAAGGAACGATCGTTGTGATA.............................................................................................................................................	21	1	1183.00	1183	9	2	1166	6
...................................................................................................................................................AAAGGAACGATCGTTGTGAT..............................................................................................................................................	20	1	899.00	899	2	4	874	19
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATA................................................................................................	23	1	631.00	631	184	0	423	24
....................................................................................................................................................AAGGAACGATCGTTGTGATATG...........................................................................................................................................	22	1	177.00	177	44	0	133	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTAT.................................................................................................	21	1	174.00	174	15	0	158	1
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGT..........................................................................................................................................	24	1	139.00	139	3	0	135	1
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGA..........................................................................................................................................	24	1	109.00	109	2	0	107	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATT...........................................................................................................................................	23	1	97.00	97	1	1	92	3
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATA................................................................................................	22	1	75.00	75	28	0	44	3
.................................................................................................................................................TAAAAGGAACGATCGTTGTGAT..............................................................................................................................................	22	1	66.00	66	0	0	66	0
...............................................................................................................................TT-CATCGGGCCATTCGCTA..................................................................................................................................................................	19	1	66.00	66	5	0	54	7
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGC..........................................................................................................................................	24	1	57.00	57	0	0	56	1
....................................................................................................................................................AAGGAACGATCGTTGTGATAT............................................................................................................................................	21	1	43.00	43	7	0	35	1
...................................................................................................................................................AAAGGAACGATCGTTGTGATATC...........................................................................................................................................	23	1	40.00	40	1	0	38	1
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAA...............................................................................................	24	1	34.00	34	6	0	28	0
...................................................................................................................................................AAAGGAACGATCGTTGTGA...............................................................................................................................................	19	1	31.00	31	1	0	30	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATA...........................................................................................................................................	23	1	31.00	31	0	0	31	0
...................................................................................................................................................AAAGGAACGATCGTTGTG................................................................................................................................................	18	1	27.00	27	0	0	27	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTT...................................................................................................	20	1	27.00	27	2	0	24	1
..............................................................................................................................................................................................TATCACAGTGATTTTCCT.....................................................................................................	18	1	26.00	26	0	0	25	1
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTA..................................................................................................	21	1	23.00	23	2	0	21	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATAC............................................................................................................................................	22	1	22.00	22	0	0	22	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGTT.........................................................................................................................................	25	1	16.00	16	0	1	15	0
..................................................................................................................................................................................................ACAGTGATTTTCCTTTAT.................................................................................................	18	1	13.00	13	0	0	13	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTAT.................................................................................................	20	1	10.00	10	0	0	10	0
.................................................................................................................................................TAAAAGGAACGATCGTTGTGATA.............................................................................................................................................	23	1	10.00	10	0	0	10	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATG.............................................................................................................................................	21	1	8.00	8	0	0	8	0
....................................................................................................................................................AAGGAACGATCGTTGTGATA.............................................................................................................................................	20	1	7.00	7	1	0	6	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATACC...........................................................................................................................................	23	1	6.00	6	0	0	6	0
.....................................................................................................................................................AGGAACGATCGTTGTGATATG...........................................................................................................................................	21	1	6.00	6	4	0	2	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGAA.........................................................................................................................................	25	1	5.00	5	0	0	5	0
..................................................................................................................................................................................................ACAGTGATTTTCCTTTATA................................................................................................	19	1	5.00	5	0	0	5	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTATA................................................................................................	21	1	4.00	4	3	0	1	0
.....................................................................................................................A---------TT-CATCGGGCCATTCGCTA..................................................................................................................................................................	20	1	4.00	4	0	0	4	0
.......................................................................................................................................................GAACGATCGTTGTGATATG...........................................................................................................................................	19	1	4.00	4	0	0	4	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATAA............................................................................................................................................	22	1	3.00	3	0	0	3	0
.......................................................................................................................................................GAACGATCGTTGTGATAT............................................................................................................................................	18	1	3.00	3	0	0	3	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATAA...............................................................................................	23	1	3.00	3	0	0	3	0
........................................................................................................................................................AACGATCGTTGTGATATG...........................................................................................................................................	18	1	3.00	3	0	0	3	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATT.............................................................................................................................................	21	1	3.00	3	0	0	3	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGGT.........................................................................................................................................	25	1	2.00	2	0	0	2	0
.....................................................................................................................................................AGGAACGATCGTTGTGATAT............................................................................................................................................	20	1	2.00	2	1	0	1	0
.................................................................................................................................................TAAAAGGAACGATCGTTGTGATAT............................................................................................................................................	24	1	2.00	2	0	0	1	1
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAT...............................................................................................	24	1	2.00	2	0	0	2	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGTA.........................................................................................................................................	25	1	2.00	2	0	0	2	0
..................................................................................................................................................AAAAGGAACGATCGTTGTGAT..............................................................................................................................................	21	1	2.00	2	0	0	2	0
.................................................................................................................................................TAAAAGGAACGATCGTTGTGA...............................................................................................................................................	21	1	2.00	2	0	0	2	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATAG............................................................................................................................................	22	1	2.00	2	0	0	2	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGG..........................................................................................................................................	24	1	2.00	2	0	0	2	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGAT.........................................................................................................................................	25	1	2.00	2	0	0	1	1
...................................................................................................................................................AAAGGAACGATCGTTGTGATATTTT.........................................................................................................................................	25	1	1.00	1	0	0	1	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTT....................................................................................................	18	1	1.00	1	0	0	1	0
...................................................................................................................AAA---------TT-CATCGGGCCATTCGCTA..................................................................................................................................................................	22	1	1.00	1	0	0	1	0
...................................................................................................................................................AAAGGAACGATCGTTGTTC...............................................................................................................................................	19	1	1.00	1	0	0	1	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATAG...............................................................................................	23	1	1.00	1	0	0	1	0
....................................................................................................................................................................................................AGTGATTTTCCTTTATAA...............................................................................................	18	1	1.00	1	0	0	1	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTATA.................................................................................................	22	2	1.00	2	0	0	2	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATACT...........................................................................................................................................	23	1	1.00	1	0	0	1	0
................................................................................................................................................CTAAAAGGAACGATCGTTGTGAT..............................................................................................................................................	23	1	1.00	1	0	0	1	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATTT..........................................................................................................................................	24	1	1.00	1	0	0	1	0
...................................................................................................................................................AAAGGAACGATCGTTGTGT...............................................................................................................................................	19	1	1.00	1	0	0	1	0

droYak3

GGG-----------------------------------------------------------------TCAAG------------AAATCGAGTTAAG-------T-GTTCCC-CCAA---------TT-TAACGGGCCGTTCGCTAAAAGGAACGATCGTTGTGATATGCGTTAT-TCC----CTAACATATCACAGTGATTTTCCTTTATAACGCATGT----ACAAAGTCCACAACTCATCAA-GGGAAA----------TG---------AAAGCC-----AAAGTCGGCATCTCACT-AAGTTT	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
...................................................................................................................................................AAAGGAACGATCGTTGTGATATG...........................................................................................................................................	23	1	203258.00	203258	28	64	192691	10435	7	26	5	2	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATAT............................................................................................................................................	22	1	76864.00	76864	28	31	73957	2786	4	25	9	5	1	18	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATA.............................................................................................................................................	21	1	10780.00	10780	21	5	10411	336	1	1	0	1	0	4	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATAC............................................................................................................................................	22	1	5615.00	5615	0	0	5611	4	0	0	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTAT.................................................................................................	22	1	3667.00	3667	0	32	1912	1723	0	0	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATA................................................................................................	23	1	3427.00	3427	0	13	1986	1428	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGAT..............................................................................................................................................	20	1	2567.00	2567	36	2	2330	194	0	1	3	0	0	1	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATT...........................................................................................................................................	23	1	1430.00	1430	0	0	1370	60	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGT..........................................................................................................................................	24	1	1377.00	1377	2	0	1346	28	0	1	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGA..........................................................................................................................................	24	1	748.00	748	0	0	729	18	0	1	0	0	0	0	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTAT.................................................................................................	21	1	505.00	505	0	1	327	177	0	0	0	0	0	0	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATA................................................................................................	22	1	481.00	481	0	3	367	111	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGC..........................................................................................................................................	24	1	426.00	426	0	0	407	19	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGAC..............................................................................................................................................	20	1	396.00	396	4	0	392	0	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATC...........................................................................................................................................	23	1	325.00	325	0	0	311	14	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATA...........................................................................................................................................	23	1	246.00	246	0	0	235	11	0	0	0	0	0	0	0
....................................................................................................................................................AAGGAACGATCGTTGTGATATG...........................................................................................................................................	22	1	193.00	193	0	7	185	1	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGA...............................................................................................................................................	19	1	153.00	153	4	0	139	9	0	0	0	1	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTAC.................................................................................................	22	1	116.00	116	0	0	113	3	0	0	0	0	0	0	0
...............................................................................................................................TT-TAACGGGCCGTTCGCTA..................................................................................................................................................................	19	1	94.00	94	0	0	56	38	0	0	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTA..................................................................................................	21	1	90.00	90	0	3	67	20	0	0	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAA...............................................................................................	24	1	73.00	73	0	1	36	36	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATAA............................................................................................................................................	22	1	71.00	71	0	0	67	4	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATACC...........................................................................................................................................	23	1	67.00	67	0	0	65	2	0	0	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTT...................................................................................................	20	1	59.00	59	0	0	9	50	0	0	0	0	0	0	0
....................................................................................................................................................AAGGAACGATCGTTGTGATAT............................................................................................................................................	21	1	53.00	53	0	3	50	0	0	0	0	0	0	0	0
.....................................................................................................................................................AGGAACGATCGTTGTGATATG...........................................................................................................................................	21	1	49.00	49	0	0	49	0	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGG..........................................................................................................................................	24	1	47.00	47	0	0	44	3	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATG.............................................................................................................................................	21	1	32.00	32	0	0	31	1	0	0	0	0	0	0	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTAC.................................................................................................	21	1	30.00	30	0	0	30	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................ACAGTGATTTTCCTTTAT.................................................................................................	18	1	24.00	24	0	0	2	22	0	0	0	0	0	0	0
..................................................................................................................................................................................................ACAGTGATTTTCCTTTATA................................................................................................	19	1	20.00	20	0	1	5	14	0	0	0	0	0	0	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTAT.................................................................................................	20	1	20.00	20	0	1	10	9	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATT.............................................................................................................................................	21	1	20.00	20	0	0	20	0	0	0	0	0	0	0	0
........................................................................................................................................................AACGATCGTTGTGATATG...........................................................................................................................................	18	1	17.00	17	0	0	17	0	0	0	0	0	0	0	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTATA................................................................................................	21	1	14.00	14	0	1	12	1	0	0	0	0	0	0	0
......................................................................................................................................................GGAACGATCGTTGTGATATG...........................................................................................................................................	20	1	14.00	14	0	0	14	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATAA...............................................................................................	23	1	13.00	13	0	0	10	3	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGTT.........................................................................................................................................	25	1	13.00	13	0	0	11	2	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATC.............................................................................................................................................	21	1	12.00	12	0	0	9	3	0	0	0	0	0	0	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTA..................................................................................................	20	1	12.00	12	0	0	11	1	0	0	0	0	0	0	0
....................................................................................................................................................AAGGAACGATCGTTGTGATAC............................................................................................................................................	21	1	11.00	11	0	0	11	0	0	0	0	0	0	0	0
.....................................................................................................................................................AGGAACGATCGTTGTGATAT............................................................................................................................................	20	1	11.00	11	0	0	11	0	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATTT..........................................................................................................................................	24	1	11.00	11	0	0	11	0	0	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGAT.........................................................................................................................................	25	1	11.00	11	0	0	11	0	0	0	0	0	0	0	0

droEre2

AGCA----------------------------------------------------------------------------------AATCCAGTTAAG-------T-GATCCC-CTAA---------TT-TGACGGGCCGTTCGCTAAAAGGAACGATCGTTGTGATATGCGTTGT-TCC----CTAACATATCACAGTGATTTTCCTTTATAACGCATGT----AAAAAGTCCAAAACTCATCAATGGGAAA----------TG---------AAAGCC-----AAAGTTGCCA--------------	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
...................................................................................................................................................AAAGGAACGATCGTTGTGATATG...........................................................................................................................................	23	1	6818.00	6818	1151	2632	2	3003	8	16	6
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTAT.................................................................................................	22	1	3303.00	3303	361	1704	0	1233	1	4	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATAT............................................................................................................................................	22	1	2638.00	2638	300	1366	1	954	9	8	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATA................................................................................................	23	1	2516.00	2516	512	1457	0	545	0	2	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATA.............................................................................................................................................	21	1	465.00	465	28	261	0	174	1	1	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTAT.................................................................................................	21	1	324.00	324	48	152	0	123	0	1	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATA................................................................................................	22	1	229.00	229	52	143	0	34	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGAT..............................................................................................................................................	20	1	229.00	229	4	74	0	145	2	4	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATT...........................................................................................................................................	23	1	194.00	194	8	28	0	158	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATAC............................................................................................................................................	22	1	112.00	112	1	108	0	3	0	0	0
....................................................................................................................................................AAGGAACGATCGTTGTGATATG...........................................................................................................................................	22	1	109.00	109	107	1	0	1	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTAC.................................................................................................	22	1	103.00	103	0	99	0	4	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTA..................................................................................................	21	1	66.00	66	15	34	0	17	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAA...............................................................................................	24	1	65.00	65	10	32	0	23	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGT..........................................................................................................................................	24	1	55.00	55	3	42	0	9	1	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATC...........................................................................................................................................	23	1	43.00	43	4	14	0	25	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTT...................................................................................................	20	1	37.00	37	1	8	0	28	0	0	0
....................................................................................................................................................AAGGAACGATCGTTGTGATAT............................................................................................................................................	21	1	34.00	34	31	2	0	1	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGA..........................................................................................................................................	24	1	30.00	30	6	16	0	8	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGC..........................................................................................................................................	24	1	19.00	19	0	12	0	7	0	0	0
...............................................................................................................................TT-TGACGGGCCGTTCGCTA..................................................................................................................................................................	19	1	17.00	17	4	0	0	13	0	0	0
..................................................................................................................................................................................................ACAGTGATTTTCCTTTAT.................................................................................................	18	1	16.00	16	0	1	0	15	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGA...............................................................................................................................................	19	1	13.00	13	0	6	0	6	0	1	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTAC.................................................................................................	21	1	11.00	11	0	11	0	0	0	0	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATAA...............................................................................................	23	1	10.00	10	3	4	0	3	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAT...............................................................................................	24	1	10.00	10	1	3	0	6	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATACC...........................................................................................................................................	23	1	10.00	10	0	9	0	1	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATA...........................................................................................................................................	23	1	9.00	9	2	0	0	7	0	0	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTAT.................................................................................................	20	1	8.00	8	2	2	0	4	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGAC..............................................................................................................................................	20	1	7.00	7	0	7	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAC...............................................................................................	24	1	6.00	6	0	6	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTT....................................................................................................	19	1	6.00	6	1	1	0	4	0	0	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTATA................................................................................................	21	1	6.00	6	0	5	0	1	0	0	0
..................................................................................................................................................................................................ACAGTGATTTTCCTTTATA................................................................................................	19	1	5.00	5	0	2	0	3	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATGTT.........................................................................................................................................	25	1	4.00	4	0	1	0	2	1	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATACT...........................................................................................................................................	23	1	4.00	4	0	1	0	3	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTG................................................................................................................................................	18	1	4.00	4	0	1	0	2	0	1	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATG................................................................................................	23	1	4.00	4	1	2	0	1	0	0	0
.....................................................................................................................................................AGGAACGATCGTTGTGATATG...........................................................................................................................................	21	1	4.00	4	3	1	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATT................................................................................................	23	1	3.00	3	0	2	0	1	0	0	0
......................................................................................................................................................GGAACGATCGTTGTGATATG...........................................................................................................................................	20	1	3.00	3	3	0	0	0	0	0	0
...............................................................................................................................................................................................ATCACAGTGATTTTCCTTTATT................................................................................................	22	1	3.00	3	0	1	0	2	0	0	0
.................................................................................................................................................................................................CACAGTGATTTTCCTTTATA................................................................................................	20	1	3.00	3	1	2	0	0	0	0	0
.................................................................................................................................................................................................CACAGTGATTTTCCTTTAT.................................................................................................	19	1	3.00	3	1	1	0	1	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATC................................................................................................	23	1	3.00	3	0	1	0	2	0	0	0
........................................................................................................................................................AACGATCGTTGTGATATG...........................................................................................................................................	18	1	2.00	2	0	0	0	2	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATAA............................................................................................................................................	22	1	2.00	2	0	1	0	1	0	0	0
....................................................................................................................................................AAGGAACGATCGTTGTGAT..............................................................................................................................................	19	1	2.00	2	1	1	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATATTA..........................................................................................................................................	24	1	2.00	2	0	0	0	2	0	0	0
.......................................................................................................................................................GAACGATCGTTGTGATATG...........................................................................................................................................	19	1	2.00	2	1	0	0	1	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCTTTATAAA..............................................................................................	25	1	2.00	2	0	1	0	1	0	0	0
................................................................................................................................................................................................TCACAGTGATTTTCCTTTATAA...............................................................................................	22	1	2.00	2	1	0	0	1	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATG.............................................................................................................................................	21	1	2.00	2	1	1	0	0	0	0	0
..............................................................................................................................................................................................TATCACAGTGATTTTCCT.....................................................................................................	18	1	2.00	2	0	0	0	1	0	1	0
.....................................................................................................................................................AGGAACGATCGTTGTGATAT............................................................................................................................................	20	1	2.00	2	2	0	0	0	0	0	0
...................................................................................................................................................AAAGGAACGATCGTTGTGATAAT...........................................................................................................................................	23	1	2.00	2	0	0	0	2	0	0	0

dgr-mir-5-1

scaffold_15112:2108531-2108603 -

Known

Unknown

3pUTR

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-35.7	-35.4