dgr-mir-33

intron [Dgri\GH14653-in]; utr5 [utr5_plus_8693]; pre_miRNA [Dgri\mir-33-RM]; miRNA [Dgri\miR-33-RA]

CTCGATGGATGGCTGATAGATTCCTCTGCACAGTTAGGGCAGACATCTCCAGGAGCTGTCACGAAGGTGCATTGTAGTCGCATTGTCTGTCCAAAAATTGCATGCGGCAATACAACTGCAGTGCAAGCTCCGTGCAGTTCACTAGCAACAACTCTTTGATCGCTGATCGATCTGATCTCTCCCTTCGCTCCT *************************************************.((((((.((((.((.(((((((((((...((((.((((.(((...)))...))))))))...)))))))))))..)).))))))))))....**********************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M041 female body	V109 male body
..................................................................GTGCATTGTAGTCGCATTGTC.........................................................................................................	21	0	1	2855.00	2855	2704	151
..................................................................GTGCATTGTAGTCGCATTGT..........................................................................................................	20	0	1	1094.00	1094	937	157
...........................................................................................................CAATACAACTGCAGTGCAAGCT...............................................................	22	0	1	923.00	923	797	126
..................................................................GTGCATTGTAGTCGCATTG...........................................................................................................	19	0	1	375.00	375	371	4
...................................................................TGCATTGTAGTCGCATTGTC.........................................................................................................	20	0	1	211.00	211	211	0
..................................................................GTGCATTGTAGTCGCATTGTCT........................................................................................................	22	0	1	209.00	209	201	8
...........................................................................................................CAATACAACTGCAGTGCAAGC................................................................	21	0	1	114.00	114	113	1
...................................................................TGCATTGTAGTCGCATTGT..........................................................................................................	19	0	1	79.00	79	79	0
..................................................................GTGCATTGTAGTCGCATT............................................................................................................	18	0	1	70.00	70	69	1
............................................................................................................AATACAACTGCAGTGCAAGCT...............................................................	21	0	1	70.00	70	70	0
..................................................................GTGCATTGTAGTCGCATTGTCA........................................................................................................	22	1	1	59.00	59	57	2
..................................................................GTGCATTGTAGTCGCATTGTT.........................................................................................................	21	1	1	48.00	48	43	5
...................................................................TGCATTGTAGTCGCATTG...........................................................................................................	18	0	1	29.00	29	29	0
...........................................................................................................CAATACAACTGCAGTGCAAGCTT..............................................................	23	1	1	24.00	24	20	4
....................................................................GCATTGTAGTCGCATTGTC.........................................................................................................	19	0	1	16.00	16	15	1
...................................................................TGCATTGTAGTCGCATTGTCT........................................................................................................	21	0	1	13.00	13	13	0
...........................................................................................................CAATACAACTGCAGTGCAAG.................................................................	20	0	1	10.00	10	9	1
............................................................................................................AATACAACTGCAGTGCAAGC................................................................	20	0	1	9.00	9	9	0
..................................................................GTGCATTGTAGTCGCATTGTA.........................................................................................................	21	1	1	7.00	7	5	2
...................................................................TGCATTGTAGTCGCATTGTT.........................................................................................................	20	1	1	7.00	7	7	0
.................................................................CGTGCATTGTAGTCGCATTGTC.........................................................................................................	22	1	1	5.00	5	5	0
............................................................................................................AATACAACTGCAGTGCAAGCTT..............................................................	22	1	1	5.00	5	5	0
...........................................................................................................CAATACAACTGCAGTGCA...................................................................	18	0	1	5.00	5	5	0
..................................................................GCGCATTGTAGTCGCATTGTC.........................................................................................................	21	1	1	5.00	5	5	0
...........................................................................................................CAATACAACTTCAGTGCAAGCT...............................................................	22	1	1	4.00	4	3	1
...........................................................................................................CAATACAACTGCAGTGCAA..................................................................	19	0	1	4.00	4	4	0
....................................................................GCATTGTAGTCGCATTGT..........................................................................................................	18	0	1	4.00	4	4	0
..................................................................GTGCATTGTAGTCGCATTGTCC........................................................................................................	22	1	1	3.00	3	3	0
.................................................................TGTGCATTGTAGTCGCATTGTC.........................................................................................................	22	1	1	3.00	3	3	0
..................................................................GTGCATTGTAGTCGCATTGTG.........................................................................................................	21	1	1	3.00	3	3	0
..................................................................GTGCATTGTAGTCGCATTGG..........................................................................................................	20	1	1	3.00	3	3	0
..........................................................................................................CCAATACAACTGCAGTGCAAGCT...............................................................	23	1	1	3.00	3	3	0
...........................................................................................................CAATGCAACTGCAGTGCAAGCT...............................................................	22	1	1	3.00	3	3	0
...............................................................................................................ACAACTGCAGTGCAAGCT...............................................................	18	0	1	3.00	3	3	0
...........................................................................................................CAATACAACTGCAGTGCAAGCC...............................................................	22	1	1	3.00	3	3	0
..................................................................GTGCATTGTAGTCGCATTGTAC........................................................................................................	22	2	1	3.00	3	3	0
..................................................................GTTCATTGTAGTCGCATTGTC.........................................................................................................	21	1	1	3.00	3	3	0
...........................................................................................................CAATACAACTGCAGTGCGAGCT...............................................................	22	1	1	3.00	3	2	1
..........................................................................................................ACAATACAACTGCAGTGCAAGCT...............................................................	23	1	1	2.00	2	2	0
..................................................................GTGCATTGTAGTCGCATTGTTG........................................................................................................	22	2	1	2.00	2	2	0
..................................................................GTGCATTGTAGTCGCATGGTC.........................................................................................................	21	1	1	2.00	2	0	2
..................................................................GTGCATTGTAGTCGCATTGTCG........................................................................................................	22	1	1	2.00	2	2	0
.......................................................................................TGTCCAAAAATTGCATGCGG.....................................................................................	20	0	1	2.00	2	1	1
..................................................................GTGCATTGTAGTCGCATTGTCAA.......................................................................................................	23	2	1	2.00	2	2	0
..........................................................................................................TCAATACAACTGCAGTGCAAGCT...............................................................	23	1	1	2.00	2	2	0
....................................................................GCATTGTAGTCGCATTGTCT........................................................................................................	20	0	1	2.00	2	2	0
..................................................................GTGCACTGTAGTCGCATTGT..........................................................................................................	20	1	1	2.00	2	0	2
...........................................................................................................CAATACAACTGCAGTGCAAGCTA..............................................................	23	1	1	2.00	2	2	0
.............................................................................................................ATACAACTGCAGTGCAAGCT...............................................................	20	0	1	2.00	2	2	0
..................................................................GTGCATTGTAGTTGCATTGTC.........................................................................................................	21	1	1	2.00	2	2	0
..................................................................GTGCATTGTGGTCGCATTGTC.........................................................................................................	21	1	1	2.00	2	2	0
...................................................................TGCATTGTAGTCGCATTGTCA........................................................................................................	21	1	1	2.00	2	2	0
..................................................................GTGCATTTTAGTCGCATTGTC.........................................................................................................	21	1	1	2.00	2	2	0
.................................................................CGTGCATTGTAGTCGCATTGT..........................................................................................................	21	1	1	2.00	2	2	0
.................................................................GGTGCATTGTAGTCGCATTGT..........................................................................................................	21	0	1	2.00	2	2	0
..................................................................GTGCATTGTAGTCGCATTGTTT........................................................................................................	22	1	1	2.00	2	2	0
..................................................................GTGCATCGTAGTCGCATTGTC.........................................................................................................	21	1	1	2.00	2	0	2
..................................................................TTGCATTGTAGTCGCATTGTC.........................................................................................................	21	1	1	2.00	2	2	0
..................................................................GTGCATTGCAGTCGCATTGT..........................................................................................................	20	1	1	2.00	2	1	1
..................................................................GTGCATTGTAGTCGCATTGCC.........................................................................................................	21	1	1	2.00	2	2	0
..................................................................GTTCATTGTAGTCGCATTGT..........................................................................................................	20	1	1	2.00	2	2	0
.....................................................................CATTGTAGTCGCATTGTC.........................................................................................................	18	0	1	2.00	2	2	0
...........................................................................................................CAATACAACTGCAGTGCAAGCTG..............................................................	23	1	1	1.00	1	1	0
..............................................................................................................TACAACTGCAGTGCAAGCT...............................................................	19	0	1	1.00	1	1	0
..................................................................GTGCATTGAAGTCGCATTG...........................................................................................................	19	1	1	1.00	1	0	1
..................................................................GTGCATTGTAGTCGCATCGTC.........................................................................................................	21	1	1	1.00	1	1	0
..................................................................GTGCATTGTACTCGCATTGTC.........................................................................................................	21	1	1	1.00	1	1	0
..................................................................GTGCATTGTAGTCGCATTGTTGC.......................................................................................................	23	3	1	1.00	1	1	0
..................................................................GTGCAATGTAGTCGCATTGTC.........................................................................................................	21	1	1	1.00	1	0	1
............................................................TCGAGCGTGCATTGTAGTCGCATTGTC.........................................................................................................	27	3	1	1.00	1	1	0
...........................................................................................................CAATACAACTGCAGTGCAAGCTAA.............................................................	24	2	1	1.00	1	1	0
................................................................TCGTGCATTGTAGTCGCATTGT..........................................................................................................	22	2	1	1.00	1	1	0
...................................................................TGCATTGTAGTCGCATTGTCTTT......................................................................................................	23	1	1	1.00	1	1	0
..................................................................GTGCATTGTAGTCGCATTGTCTAAGCA...................................................................................................	27	3	1	1.00	1	1	0
..................................................................GAGCATTGTAGTCGCATT............................................................................................................	18	1	1	1.00	1	1	0
..................................................................GTGCATTATAGTCGCATTGTC.........................................................................................................	21	1	1	1.00	1	1	0
.............................................................................................................ATACAACTGCAGTGCAAGC................................................................	19	0	1	1.00	1	1	0
..................................................................GTGCATTGTAGTCGCATTGTCTGGT.....................................................................................................	25	2	1	1.00	1	1	0
..................................................................GCGCATTGTAGTTGCATTGTC.........................................................................................................	21	2	1	1.00	1	0	1
..................................................................GTGCATTGTAGTCGCATTGTGCCT......................................................................................................	24	3	1	1.00	1	1	0
.................................................................GGTGCATTGTAGTCGCATTG...........................................................................................................	20	0	1	1.00	1	1	0
..................................................................GTGCATTGTAGTCGCATTCT..........................................................................................................	20	1	1	1.00	1	0	1
...........................................................................................................CAATACAACTGCAGTGCAAGCTGTGAG..........................................................	27	3	1	1.00	1	1	0
...........................................................................................................CAATACAACTGCAGTGCCAGCT...............................................................	22	1	1	1.00	1	0	1
..................................................................GTGCATTGTAGTCTCATTGTC.........................................................................................................	21	1	1	1.00	1	1	0
............................................................................................................AATGCAACTGCAGTGCAAGCT...............................................................	21	1	1	1.00	1	1	0
..................................................................GCGCATTGTAGTCGCATTG...........................................................................................................	19	1	1	1.00	1	1	0
..................................................................GTGCATTGTAGTCGCATTGTCTTG......................................................................................................	24	2	1	1.00	1	1	0
...........................................................................................................CAATAGAACTGCAGTGCAAGCT...............................................................	22	1	1	1.00	1	0	1
..................................................................GTGCATTGTAGCCGCATTGT..........................................................................................................	20	1	1	1.00	1	1	0
...........................................................................................................CAATACAACTGCAGTGCAAGT................................................................	21	1	1	1.00	1	1	0
...................................................................TGCATTGTAGTCGCATTGTCG........................................................................................................	21	1	1	1.00	1	1	0
..................................................................GTGCATTGTAGTCGCATTGTAT........................................................................................................	22	1	1	1.00	1	1	0
..................................................................GTGCATTGTAGTCGCATTGTCATG......................................................................................................	24	3	1	1.00	1	1	0
...........................................................................................................CAGTACAACTGCAGTGCAAGCT...............................................................	22	1	1	1.00	1	0	1
...........................................................................................................CAATACAACTGCAGTGCAAC.................................................................	20	1	1	1.00	1	1	0
............................................................................................................AATACAACTGCAGTGCAAGCTA..............................................................	22	1	1	1.00	1	1	0
..................................................................GTGCATTGTAGTCGCATTTT..........................................................................................................	20	1	1	1.00	1	0	1
...........................................................................................................CAATACAACTGCAGTGCAAGCTC..............................................................	23	0	1	1.00	1	1	0
..................................................................GTGCATTGTAGTCGCATTGTTGG.......................................................................................................	23	2	1	1.00	1	1	0
...........................................................................................................CAAAACAACTGCAGTGCAAGCT...............................................................	22	1	1	1.00	1	1	0
..................................................................GTGCGTTGTAGTCGCATTGTC.........................................................................................................	21	1	1	1.00	1	1	0
..................................................................GTCCATTGTAGTCGCATAGT..........................................................................................................	20	2	1	1.00	1	0	1
..................................................................GTGCATTGTAGTCGCATTGTTA........................................................................................................	22	2	1	1.00	1	1	0
..................................................................GTGCATTGTAGTCGCATTGTCTT.......................................................................................................	23	1	1	1.00	1	1	0
...........................................................................................................CAATACCACTGCAGTGCAAGCT...............................................................	22	1	1	1.00	1	0	1
...........................................................................................................CAATACAACTCCAGTGCAAGCT...............................................................	22	1	1	1.00	1	1	0
..................................................................GTGCATTGTAGTAGCATTGTC.........................................................................................................	21	1	1	1.00	1	1	0
...........................................................................................................CAATCCAACTGCAGTGCAAGCT...............................................................	22	1	1	1.00	1	0	1
............................................................................................................AATACAACTGCAGTCCAAGCT...............................................................	21	1	1	1.00	1	1	0
...........................................................................................................CAATACAGCTGCAGTGCAAGCT...............................................................	22	1	1	1.00	1	1	0
............................................................................................................AATACAACTGCAGTGCAA..................................................................	18	0	1	1.00	1	1	0
..................................................................GTGCATTGTAGTGGCATTGTC.........................................................................................................	21	1	1	1.00	1	1	0
.................................................................AGTGCATTGTAGTCGCATTG...........................................................................................................	20	1	1	1.00	1	1	0
...............................................................TTCGTGCATTGTAGTCGCATTGT..........................................................................................................	23	3	1	1.00	1	1	0
..................................................................GTGCATTGTAGTCACATTGT..........................................................................................................	20	1	1	1.00	1	1	0
..................................................................GTGCATTGTAGTCGCATAGTC.........................................................................................................	21	1	1	1.00	1	0	1
..................................................................GTGCATTGTAGTCGCATTGTCTGG......................................................................................................	24	1	1	1.00	1	1	0
...........................................................................................................CAATACAACTGCAGTGCAAAC................................................................	21	1	1	1.00	1	1	0
...................................................................TGCATTGTAGTCGCATTGTCTC.......................................................................................................	22	1	1	1.00	1	1	0
...........................................................................................................CAATATAACTGCAGTGCAAGCT...............................................................	22	1	1	1.00	1	0	1
..................................................................GTGCATTGTAATCGCATTGT..........................................................................................................	20	1	1	1.00	1	1	0
...................................................................TGCATTGTAGTCGCATTGTTTTT......................................................................................................	23	2	1	1.00	1	1	0
...........................................................................................................CAATACAACTGCAGTGCTAGCT...............................................................	22	1	1	1.00	1	0	1
.........................................................................................................ATCAATACAACTGCAGTGCAAGCT...............................................................	24	2	1	1.00	1	1	0
....................................................................GCATTGTAGTCGCATTGTTT........................................................................................................	20	1	1	1.00	1	1	0
...........................................................................................................CAATACAACTGCAGTGCAAGTTT..............................................................	23	2	1	1.00	1	1	0
..................................................................GTGCATTGTAGTCGCATTGTGGC.......................................................................................................	23	3	1	1.00	1	1	0
..................................................................ATGCATTGTAGTCGCATTGTC.........................................................................................................	21	1	1	1.00	1	1	0
..................................................................GTGCATTGTAGTCGCATTGTCGGGT.....................................................................................................	25	3	1	1.00	1	1	0
..................................................................GTGCATGGTAGTCGCATTGTC.........................................................................................................	21	1	1	1.00	1	0	1
...........................................................................................................CAATACAACTGCAGTGCAAGCTAAG............................................................	25	2	1	1.00	1	1	0
..................................................................GTGCATTGTAGTCGCATTGTGA........................................................................................................	22	2	1	1.00	1	1	0
..................................................................GTGCATTGTAGTCGCTTTGTCT........................................................................................................	22	1	1	1.00	1	1	0
...........................................................................................................CAATTCAACTGCAGTGCAAGCT...............................................................	22	1	1	1.00	1	1	0
..................................................................GTGCATTGTAGTCGCATTGTCGTTG.....................................................................................................	25	3	1	1.00	1	1	0
...........................................................................................................CAATACAACTGCAGTGCT...................................................................	18	1	1	1.00	1	1	0
...........................................................................................................CAATACAACTGCAGTGCAAGCTTT.............................................................	24	2	1	1.00	1	1	0
...........................................................................................................CAATACAACTGCAGTGCAAGAT...............................................................	22	1	1	1.00	1	1	0
...........................................................................................................CAATACAACTGCAGTGCAAGAA...............................................................	22	2	1	1.00	1	1	0
..................................................................GTGCATTGTAGTCGCATTTTCA........................................................................................................	22	2	1	1.00	1	1	0
..........................................................................................................ACAATACAACTGCAGTGCAAGC................................................................	22	1	1	1.00	1	1	0
...........................................................................................................CAATACAACTGCAGTGCAAGCTGGG............................................................	25	2	1	1.00	1	1	0
...................................................................TGCATTGTATTCGCATTGT..........................................................................................................	19	1	1	1.00	1	1	0
..................................................................GTGCATTGTAGTCGCATCGT..........................................................................................................	20	1	1	1.00	1	0	1
..................................................................GTGCATTGTAGTCGCATTGTCTA.......................................................................................................	23	1	1	1.00	1	1	0
..........................................................................................................GCAATACAACTGCAGTGCAAGCT...............................................................	23	0	1	1.00	1	1	0
..................................................................GTGCATTGTAGTCGAATTGTC.........................................................................................................	21	1	1	1.00	1	1	0
...................................................................TGCATTGTAGTCGCATTGTTT........................................................................................................	21	1	1	1.00	1	1	0
..................................................................GTGCATTGTAGTCGCATTGTCTGCA.....................................................................................................	25	2	1	1.00	1	1	0
....................................................................GCATTGTAGTCTCATTGT..........................................................................................................	18	1	1	1.00	1	1	0
...........................................................................................................CAATACAACTGCAGTGAAAGCT...............................................................	22	1	1	1.00	1	1	0
..................................................................GTGCATTGTAGTCGCATTGTCGTG......................................................................................................	24	3	1	1.00	1	1	0
...........................................................................................................CAATACAACTGCAGTTCAAGCT...............................................................	22	1	1	1.00	1	1	0
..................................................................GTGCATTGTATTCGCATTGTC.........................................................................................................	21	1	1	1.00	1	1	0
..................................................................GTGCATTGTAGTCGCATTGTCGTA......................................................................................................	24	3	1	1.00	1	1	0
.......................................................................................TGTCCAAAAATTGCATGCGGT....................................................................................	21	1	1	1.00	1	0	1
..................................................................GTGCATTGTAGTCGCATTGTGG........................................................................................................	22	2	1	1.00	1	1	0
............................................................TCCAATGTGCATTGTAGTCGCATTGTC.........................................................................................................	27	3	1	1.00	1	1	0
..................................................................GTGCATTGTAGTCGCATTGTCTC.......................................................................................................	23	1	1	1.00	1	1	0
................................................................GTGTGCATTGTAGTCGCATTGTCA........................................................................................................	24	3	1	1.00	1	1	0
...............................................................ATAGTGCATTGTAGTCGCATTGTC.........................................................................................................	24	2	1	1.00	1	1	0
..................................................................GTGCATTGGAGTCGCATTGT..........................................................................................................	20	1	1	1.00	1	0	1
..................................................................GAGCATTGTAGTCGCATTGTC.........................................................................................................	21	1	1	1.00	1	1	0
.........................................................................................................AGAAATACAACTGCAGTGCAAGCT...............................................................	24	2	1	1.00	1	1	0
..................................................................GTGCATTGGAGTCGCATTGTC.........................................................................................................	21	1	1	1.00	1	0	1
..................................................................GTGCATTGTAGTCGCATTGTAA........................................................................................................	22	2	1	1.00	1	1	0
..................................................................GTGCATTGTAGTCCCATTGT..........................................................................................................	20	1	1	1.00	1	1	0
.............................................................ACAACGTGCATTGTAGTCGCATTGTC.........................................................................................................	26	3	1	1.00	1	1	0
..................................................................GTACATTGTAGTCGCATTGTC.........................................................................................................	21	1	1	1.00	1	0	1
................................................................AGGTGCATTGTAGTCGCATTGT..........................................................................................................	22	0	1	1.00	1	0	1
...........................................................................................................CAATACAACTACAGTGCAAGCT...............................................................	22	1	1	1.00	1	0	1
...........................................................................................................CAATACAACTGCAGTGCAAGCA...............................................................	22	1	1	1.00	1	1	0
.................................................................AGTGCATTGTAGTCGCATTGTC.........................................................................................................	22	1	1	1.00	1	1	0
.................................................................TGTGCATTGTAGTCGCATTGT..........................................................................................................	21	1	1	1.00	1	1	0
...........................................................................................................CAATACAACTGCAGTGCAAGCTGCTG...........................................................	26	3	1	1.00	1	1	0
..................................................................GTGCATTGTATTCGCATTGT..........................................................................................................	20	1	1	1.00	1	1	0
...........................................................................................................CAATACAACTGCAGTGCGAT.................................................................	20	2	2	0.50	1	1	0
..................................................................GTGCATTGTAGTCGCATTGCA.........................................................................................................	21	2	2	0.50	1	1	0
...............................................................................................................ACAACTGCAGTGCAAGCTTG.............................................................	20	2	2	0.50	1	1	0
..................................................................GTGCATTGTAGTCGCATTT...........................................................................................................	19	1	3	0.33	1	1	0
.................................................................TGTGCATTGTAGTCGCATT............................................................................................................	19	1	3	0.33	1	1	0
..................................................................GTTCATTGTAGTCGCATTGTAA........................................................................................................	22	3	4	0.25	1	0	1
...........................................................................................................CAATACAACTGCAGTGCATCT................................................................	21	3	9	0.11	1	0	1

GAGCTACCTACCGACTATCTAAGGAGACGTGTCAATCCCGTCTGTAGAGGTCCTCGACAGTGCTTCCACGTAACATCAGCGTAACAGACAGGTTTTTAACGTACGCCGTTATGTTGACGTCACGTTCGAGGCACGTCAAGTGATCGTTGTTGAGAAACTAGCGACTAGCTAGACTAGAGAGGGAAGCGAGGA **********************************************.((((((.((((.((.(((((((((((...((((.((((.(((...)))...))))))))...)))))))))))..)).))))))))))....*************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	M041 female body
..................................ATCCCGTCTGTAAATATCCT..........................................................................................................................................	20	3	5	0.20	1	1

Species	Coordinate	ID	Type	Alignment
droGri2	scaffold_15110:18214422-18214613 -	dgr-mir-33	Known_mirbase	CT--------CGATGGATGGCTGA----TAGATTCCTCTGCAC-------------AGTTAGG---GCAGACA-----------TCTCCAGGAGCTGTCACGAAGGTGCATTGTAGTCGCATTGTCTGTCCA--A-AAA----------T--T--G-C-ATGCGGCAATACAACTGCAGTGCAAGCTCCGTGCAGTTCACTAG-CAACAACTCTTTG-----ATCGCTGATCGATCT---------------------------------------GATCTCTCC-------------CTTCGCTCCT--
droVir3	scaffold_13049:22941077-22941249 -	dvi-mir-33	Known_mirbase	TG---------GAATACTTCA---------------------A--AA---TTCAAGCCCAAAA---TCCGAC---A--------TCT-CTGGAGCTGTTACGGAGGTGCATTGTAGTCGCATTGTCTGTCTC--A-AAT----------T--T--G-C-CCGCGGCAATACAACTGCAGTGCAAGCTCCGTGCAGTTCACACG-CAACGTCGGAAGTTA-------CCTG------------------CAGAAAGTCAACA-AG-------------------------ATGT----------------C
droMoj3	scaffold_6680:17552797-17552969 -	dmo-mir-33	Known_mirbase	TG---------GAGCACTGCC---------------------C--CGTTTATGCAGCA----T---TCCGAC---A--------TCT-TTGGAGCTGTGACGGAGGTGCATTGTAGTCGCATTGTCTGTATC--C---T----------TTATT-C-T-CTGCGGCAATACAACTGCAGTGCAAGCTCCGTGCAGTTCACTCG-CAACGTCGGACACCT-------TAGA-------------------ATAAAGATAAT---------------------------GTATGTTA------------T--
droWil2	scf2_1100000004511:8572465-8572656 +	dwi-mir-33	Known_mirbase	CA--------TTAAAGATCACATCG----------------------AGTAGACGGAACCTAA---ACAAAT------------------TGAAGTTACACGAAGGTGCATTGTAGTCGCATTGTCTGTGCTCCAAAAAAAAAAAACCCCCAGTTTCTATTCAGGCAATACAACTGCAGTGCAAGCTTCGTGTGACTTATAAG-CAACGGCAAATAGGT----TCAAAGG-----------------------------------------------------------ATATTCTCAACTAGA-A--AC
dp5	XR_group6:5913786-5913970 +	dps-mir-33	Known_mirbase	GT--------GTAACAATCTGCATT----------------------TGATCAAAAAACCAAA---CCAAACA-----------CTC-CCGGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTCCA--T---C----------T--T--G-ATTTCAGGCAATACAACTGCAATGCAAGCTCTGTGCATTTCATAAATCAACGCCGTCC----AATGTCGCTGGTCCAGTTTCAG-----------------------------------------TCC-------------CTGCCCCGGT--
droPer2	scaffold_47:413963-414147 +	dpe-mir-33	Known_mirbase	GT--------GTAACAATCTGCATT----------------------TGATCAAAAAACCAAA---CCAAACA-----------CTC-CCGGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTCCA--T---C----------T--T--G-ATTTCAGGCAATACAACTGCAGTGCAAGCTCTGTGCATTTCATAAATCAACGCCGTCC----AATGTCGCTGGTCCAGTTTCAG-----------------------------------------TCC-------------CTGCCCCGGT--
droAna3	scaffold_13337:19456751-19456947 -	dan-mir-33	Known_mirbase	TT--------CTGCTGATTAGCGTA---C--------------AGTGAGGTGGCCGAATACCA---GCAGACACTATACACCCGCCC-TCGGAGATGTCACGCAGGTGCATTGTAGTCGCATTGTCTGTCCC--A---C----------T--T--G-C-TCCAGGCAATACAACTGCAGTGCAAGCTCTGTGCATTTCACAAA-CAACGCCAACTTTCA-CTGACACTGG------------------CA-TACGGTGCCGGAA----------------------------CTG------------T--
droBip1	scf7180000396360:652015-652206 -			TT--------TGAAGATTT----TTTGAT--------------AGTGAGGTGACCGAATACCA---GCAGACACTATTCACCCGCCT-TCGGAGATGTCACGCAGGTGCATTGTAGTCGCATTGTCTGTCCC--G---C----------T--T--G-C-TCCAGGCAATACAACTGCAGTGCAAGCTCTGTGCATTTCACAAA-CAACGCCACCTGTCA-------CTGG------------------CA-TAAGGTGCCGGAA----------------------------CTC----------T--CC
droKik1	scf7180000302391:683537-683719 -			CA--------CGGCAGA---------------------------GTGAGTT----GAGTGACACCCACAGAA--CG--------CCT-CCGGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTTTCCCAATAT----------A--T--C-C-TCCAGGCAATACAACTGCAGTGCAAGCTCTGTGCATTTCACAAG-CAACAATGCT------------C--TTTCCTTTTTAGTTTTTGGGA-AACCGT------------------------------GTATG-------------C--CT
droFic1	scf7180000454113:2506711-2506873 -			GTCTGCATCCTGACAAAT----TCA----------------------TGGTGACCGAATGCCA---GAGGACTCTT--------CCA-ACGGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTCCC--A---A----------T--T--G-C-TTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACAAA-CAACGTCAATTGTCG-------CTGG--------------------------------------------------------------------------------
droEle1	scf7180000491193:4070886-4071052 +			GACTGCACCCTAATACACCAGCCAG----------------------TGGTGACCGGATGCCA---GCAGACTCTT--------CCT-CCAGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTCCC--A---C----------T--T--G-C-CTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACAAA-CATCGTCGACCGTCG-------CTGG--------------------------------------------------------------------------------
droRho1	scf7180000773422:131570-131774 -			CC--------CGATCAACCAGCCAA----------------------TGGTGACCGAATGCCA---GCAGACTACT--------CCT-TCAGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTCCC--A---C----------T--T--G-C-TTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTTACAAG-CAACGCCGACTGTCT-------CTGG------------------CA-AAAGTCGCCAGTAAATAAAACCCATGATCATTTTGTCCAT-T------------T--CC
droBia1	scf7180000302193:5876347-5876505 -			CC--------CGATCAGTTAGCCAA----------------------TGGTGACCGATTGCCA---GCAGACTCCT--------CAT-CCAGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTTCC--A---C----------T--T--G-C-CTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACAAA-CAACGCCGACTGTCT-------CTGG--------------------------------------------------------------------------------
droTak1	scf7180000415773:734766-734925 +			CC--------CGATCAGGCAGCCCA----------------------TGGTGACCGAATGCCA---GTTGACTCCT--------CATCCCAGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCCC--A---C----------T--C--G-C-TTCAGGCAATACAACTTCAGTGCAAGCTCCGAGCATTTCACAAA-CAACGCCGACAGTCG-------CTGG--------------------------------------------------------------------------------
droEug1	scf7180000409466:5133804-5133949 -			CT---------------------AT----------------------TGGTGACCGAATGCCA---GCAGGCTCTA--------TCT-CCAGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTTCC--A---C----------T--T--G-C-TTCAGGCAATACAACTTCAGTGCAAACTCTGTGCATTTCACAAA-CAACGCCGACGGCCT-------CTGG--------------------------------------------------------------------------------
dm3	chr3L:19791023-19791181 +	dme-mir-33	Known_mirbase	CC--------CGAACAATCAGTTTT----------------------TGGCGACTGAGTGCCA---CCAGACTCTT--------CCT-CTGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCCC--A---A----------T--T--G-C-TTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACATA-CAACGCCGAATGTCT-------CTGG--------------------------------------------------------------------------------
droSim2	3l:19400365-19400523 +	dsi-mir-33	Known_mirbase	CC--------CAAACAATCAGTCAT----------------------TGGCGACTGAGTGCCA---CCAGACTCCT--------CCT-CCGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCCC--A---A----------T--T--G-C-TTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACACA-CAACGCCGAATGTCT-------CTGG--------------------------------------------------------------------------------
droSec2	scaffold_29:452719-452895 +	dse-mir-33	Known_mirbase	CC--------CGAACAATCAGTCAT----------------------TGGCGACTGAGTGCCA---CCAGACTCTT--------CCT-CCGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCCC--A---A----------T--T--G-C-TTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACACA-CAACGCCGAATGTCT-------CTGG------------------CA-AAAGTCGACA-AG----------------------------TTT------------T--
droYak3	3L:20771308-20771466 -	dya-mir-33	Known_mirbase	CC--------CGATCAATCGGTCAA----------------------TTGCGACTGAGTGCCA---CCAGACTCTT--------ACT-CCAGAGATGTCACGAAGGTGCATTGTAGTCGCATTGTCTGTCCC--A---A----------T--T--G-C-TTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACAAA-CAACGCCGAGTGTCT-------CTGG--------------------------------------------------------------------------------
droEre2	scaffold_4784:19550540-19550698 +	der-mir-33	Known_mirbase	CC--------CGATCAATCAGTCAA----------------------TTGCGACTGAGTGCCA---CCAGACTCTC--------ACT-CCAGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCCC--A---A----------T--T--G-C-TTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACAAA-CAACGCCGAGTGTTC-------CTGG--------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droGri2

CT--------CGATGGATGGCTGA----TAGATTCCTCTGCAC-------------AGTTAGG---GCAGACA-----------TCTCCAGGAGCTGTCACGAAGGTGCATTGTAGTCGCATTGTCTGTCCA--A-AAA----------T--T--G-C-ATGCGGCAATACAACTGCAGTGCAAGCTCCGTGCAGTTCACTAG-CAACAACTCTTTG-----ATCGCTGATCGATCT---------------------------------------GATCTCTCC-------------CTTCGCTCCT--	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
.........................................................................................................GTGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	21	1	2855.00	2855	2704	151
.........................................................................................................GTGCATTGTAGTCGCATTGT.........................................................................................................................................................................................	20	1	1094.00	1094	937	157
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCT...........................................................................................................................	22	1	923.00	923	797	126
.........................................................................................................GTGCATTGTAGTCGCATTG..........................................................................................................................................................................................	19	1	375.00	375	371	4
..........................................................................................................TGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	20	1	211.00	211	211	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	22	1	209.00	209	201	8
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGC............................................................................................................................	21	1	114.00	114	113	1
..........................................................................................................TGCATTGTAGTCGCATTGT.........................................................................................................................................................................................	19	1	79.00	79	79	0
.........................................................................................................GTGCATTGTAGTCGCATT...........................................................................................................................................................................................	18	1	70.00	70	69	1
......................................................................................................................................................................AATACAACTGCAGTGCAAGCT...........................................................................................................................	21	1	70.00	70	70	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	22	1	59.00	59	57	2
.........................................................................................................GTGCATTGTAGTCGCATTGTT........................................................................................................................................................................................	21	1	48.00	48	43	5
..........................................................................................................TGCATTGTAGTCGCATTG..........................................................................................................................................................................................	18	1	29.00	29	29	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCTT..........................................................................................................................	23	1	24.00	24	20	4
...........................................................................................................GCATTGTAGTCGCATTGTC........................................................................................................................................................................................	19	1	16.00	16	15	1
..........................................................................................................TGCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	21	1	13.00	13	13	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAAG.............................................................................................................................	20	1	10.00	10	9	1
......................................................................................................................................................................AATACAACTGCAGTGCAAGC............................................................................................................................	20	1	9.00	9	9	0
.........................................................................................................GTGCATTGTAGTCGCATTGTA........................................................................................................................................................................................	21	1	7.00	7	5	2
..........................................................................................................TGCATTGTAGTCGCATTGTT........................................................................................................................................................................................	20	1	7.00	7	7	0
......................................................................................................................................................................AATACAACTGCAGTGCAAGCTT..........................................................................................................................	22	1	5.00	5	5	0
.....................................................................................................................................................................CAATACAACTGCAGTGCA...............................................................................................................................	18	1	5.00	5	5	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAA..............................................................................................................................	19	1	4.00	4	4	0
...........................................................................................................GCATTGTAGTCGCATTGT.........................................................................................................................................................................................	18	1	4.00	4	4	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCC.......................................................................................................................................................................................	22	1	3.00	3	3	0
.........................................................................................................GTGCATTGTAGTCGCATTGTG........................................................................................................................................................................................	21	1	3.00	3	3	0
.........................................................................................................GTGCATTGTAGTCGCATTGG.........................................................................................................................................................................................	20	1	3.00	3	3	0
.........................................................................................................................................................................ACAACTGCAGTGCAAGCT...........................................................................................................................	18	1	3.00	3	3	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCC...........................................................................................................................	22	1	3.00	3	3	0
.........................................................................................................GTGCATTGTAGTCGCATTGTAC.......................................................................................................................................................................................	22	1	3.00	3	3	0
.........................................................................................................GTGCATTGTAGTCGCATTGTTG.......................................................................................................................................................................................	22	1	2.00	2	2	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCG.......................................................................................................................................................................................	22	1	2.00	2	2	0
..............................................................................................................................TGTCCA--A-AAA----------T--T--G-C-ATGCGG.................................................................................................................................................	20	1	2.00	2	1	1
.........................................................................................................GTGCATTGTAGTCGCATTGTCAA......................................................................................................................................................................................	23	1	2.00	2	2	0
...........................................................................................................GCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	20	1	2.00	2	2	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCTA..........................................................................................................................	23	1	2.00	2	2	0
.......................................................................................................................................................................ATACAACTGCAGTGCAAGCT...........................................................................................................................	20	1	2.00	2	2	0
..........................................................................................................TGCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	21	1	2.00	2	2	0
........................................................................................................GGTGCATTGTAGTCGCATTGT.........................................................................................................................................................................................	21	1	2.00	2	2	0
............................................................................................................CATTGTAGTCGCATTGTC........................................................................................................................................................................................	18	1	2.00	2	2	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCTG..........................................................................................................................	23	1	1.00	1	1	0
........................................................................................................................................................................TACAACTGCAGTGCAAGCT...........................................................................................................................	19	1	1.00	1	1	0
.........................................................................................................GTGCATTGTAGTCGCATTGTTGC......................................................................................................................................................................................	23	1	1.00	1	1	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCTAA.........................................................................................................................	24	1	1.00	1	1	0
.......................................................................................................................................................................ATACAACTGCAGTGCAAGC............................................................................................................................	19	1	1.00	1	1	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTGGT....................................................................................................................................................................................	25	1	1.00	1	1	0
........................................................................................................GGTGCATTGTAGTCGCATTG..........................................................................................................................................................................................	20	1	1.00	1	1	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTTG.....................................................................................................................................................................................	24	1	1.00	1	1	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGT............................................................................................................................	21	1	1.00	1	1	0
..........................................................................................................TGCATTGTAGTCGCATTGTCG.......................................................................................................................................................................................	21	1	1.00	1	1	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCATG.....................................................................................................................................................................................	24	1	1.00	1	1	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAAC.............................................................................................................................	20	1	1.00	1	1	0
......................................................................................................................................................................AATACAACTGCAGTGCAAGCTA..........................................................................................................................	22	1	1.00	1	1	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCTC..........................................................................................................................	23	1	1.00	1	1	0
.........................................................................................................GTGCATTGTAGTCGCATTGTTA.......................................................................................................................................................................................	22	1	1.00	1	1	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTT......................................................................................................................................................................................	23	1	1.00	1	1	0
......................................................................................................................................................................AATACAACTGCAGTGCAA..............................................................................................................................	18	1	1.00	1	1	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTGG.....................................................................................................................................................................................	24	1	1.00	1	1	0
..........................................................................................................TGCATTGTAGTCGCATTGTCTC......................................................................................................................................................................................	22	1	1.00	1	1	0
.........................................................................................................GTGCATTGTAGTCGCATTGTGGC......................................................................................................................................................................................	23	1	1.00	1	1	0
.........................................................................................................GTGCATTGTAGTCGCATTGTGA.......................................................................................................................................................................................	22	1	1.00	1	1	0
.....................................................................................................................................................................CAATACAACTGCAGTGCT...............................................................................................................................	18	1	1.00	1	1	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCTTT.........................................................................................................................	24	1	1.00	1	1	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGAA...........................................................................................................................	22	1	1.00	1	1	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTA......................................................................................................................................................................................	23	1	1.00	1	1	0
....................................................................................................................................................................GCAATACAACTGCAGTGCAAGCT...........................................................................................................................	23	1	1.00	1	1	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTGCA....................................................................................................................................................................................	25	1	1.00	1	1	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCGTG.....................................................................................................................................................................................	24	1	1.00	1	1	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCGTA.....................................................................................................................................................................................	24	1	1.00	1	1	0
..............................................................................................................................TGTCCA--A-AAA----------T--T--G-C-ATGCGGT................................................................................................................................................	21	1	1.00	1	0	1
.........................................................................................................GTGCATTGTAGTCGCATTGTGG.......................................................................................................................................................................................	22	1	1.00	1	1	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTC......................................................................................................................................................................................	23	1	1.00	1	1	0
.........................................................................................................GTGCATTGTAGTCGCATTGTAA.......................................................................................................................................................................................	22	1	1.00	1	1	0
.......................................................................................................AGGTGCATTGTAGTCGCATTGT.........................................................................................................................................................................................	22	1	1.00	1	0	1
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCA...........................................................................................................................	22	1	1.00	1	1	0
.........................................................................................................GTGCATTGTAGTCGCATTGCA........................................................................................................................................................................................	21	2	0.50	1	1	0
.........................................................................................................................................................................ACAACTGCAGTGCAAGCTTG.........................................................................................................................	20	2	0.50	1	1	0
.........................................................................................................GTGCATTGTAGTCGCATTT..........................................................................................................................................................................................	19	3	0.33	1	1	0
.....................................................................................................................................................................CAATACAACTGCAGTGCATCT............................................................................................................................	21	9	0.11	1	0	1

droVir3

TG---------GAATACTTCA---------------------A--AA---TTCAAGCCCAAAA---TCCGAC---A--------TCT-CTGGAGCTGTTACGGAGGTGCATTGTAGTCGCATTGTCTGTCTC--A-AAT----------T--T--G-C-CCGCGGCAATACAACTGCAGTGCAAGCTCCGTGCAGTTCACACG-CAACGTCGGAAGTTA-------CCTG------------------CAGAAAGTCAACA-AG-------------------------ATGT----------------C	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells	SRR2096013 Ovary_Strain_9_oxidized	SRR2096014 Ovary_Strain_160_oxidized	SRR2096026 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096038 embryo_0-2h from 14 day old Strain 9 mothers	SRR2096050 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096055 Ovary_Min_43	SRR2096056 Ovary_Min_46	SRR2096057 Ovary_Min_50	SRR2096058 Ovary_Min_98	SRR2096059 Ovary_Min_164	SRR2096060 Ovary_Min_193	SRR2096061 embryo_0-2h from 14 day old Strain 160 mothers	SRR2096072 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096079 embryo_0-2h from 15to16 day old dysgenic mothers	SRR2096080 embryo_0-2h from 15to16 day old nondysgenic mothers	SRR2096081 embryo_0-2h from 15to16 day old nondysgenic mothers
.........................................................................................................GTGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	21	1	511067.00	511067	21527	59092	31113	1477	3116	4351	2968	332	503	447	167	7	14	33	3304	3571	1292	3752	3201	2199	3219	4388	4749	8613	4083	4661	7929	7065	6849	8643	3844	11947	512	3788	567	815	322	415	3587	5620	41	83	58	23	26	27	23	17	32	18	44	40	41	41	38	414	346	1230	358	258	7016	2330	156	373	1789	222	225	232	45464	46970	31879	37581	49482	49378	270	50	64	168	178
.........................................................................................................GTGCATTGTAGTCGCATTGT.........................................................................................................................................................................................	20	1	49539.00	49539	205	510	5526	38	989	1941	1216	80	174	138	72	5	8	30	330	502	293	709	585	291	1086	588	1149	2098	1098	1232	2209	1758	1349	2691	1151	3209	490	1809	816	907	527	383	1794	2402	1	1	0	1	1	4	1	0	1	1	0	0	0	0	1	16	7	33	5	60	2900	1261	0	23	277	107	115	68	389	346	281	261	462	340	43	17	19	42	67
.........................................................................................................GTGCATTGTAGTCGCATTGTCC.......................................................................................................................................................................................	22	1	20748.00	20748	617	879	4336	67	37	205	25	0	0	12	3	0	0	0	292	645	84	216	305	309	256	597	733	104	78	85	157	112	1637	1565	764	2205	4	145	3	5	3	8	29	306	1	0	2	2	0	3	0	0	1	1	0	1	1	0	0	7	6	20	1	10	319	170	1	86	92	87	86	30	305	351	449	597	737	419	28	35	20	29	23
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCT...........................................................................................................................	22	1	19963.00	19963	54	123	8414	37	67	59	17	6	2	17	0	0	0	1	551	428	350	522	332	173	102	424	738	99	217	190	330	203	878	985	445	1053	10	212	11	15	9	9	87	265	0	0	0	0	0	0	0	0	0	0	0	1	0	2	3	1	0	1	5	18	242	712	0	513	571	0	1	2	101	81	62	46	91	70	1	3	0	0	1
.........................................................................................................GTGCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	22	1	19656.00	19656	126	295	1730	26	46	10	33	4	84	7	47	6	32	44	49	53	27	70	38	33	14	62	108	67	336	403	698	580	106	140	49	167	447	24	779	811	708	506	86	20	1	3	1	4	0	3	2	2	2	2	3	1	1	1	1	1	0	2	2	72	82	27	0	502	558	160	154	91	1662	1744	1184	1312	1429	1529	84	17	15	55	76
.........................................................................................................GTGCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	22	1	19333.00	19333	393	750	1102	55	40	110	31	19	25	30	11	1	3	4	147	175	76	202	140	96	93	220	241	85	132	125	266	198	364	768	237	776	51	90	74	107	104	56	76	151	7	15	15	11	8	15	2	7	10	9	11	9	4	12	9	41	29	123	29	12	253	71	0	197	155	263	273	182	1683	1699	1465	1113	1979	1558	132	45	38	93	132
.........................................................................................................GTGCATTGTAGTCGCATTG..........................................................................................................................................................................................	19	1	8786.00	8786	98	294	2749	2	29	87	40	48	32	24	24	0	2	1	82	96	61	111	66	66	108	104	128	95	116	99	207	120	396	581	207	646	78	114	162	105	116	85	65	123	0	0	1	1	0	0	2	0	1	0	1	0	0	0	0	2	1	15	3	7	342	42	0	2	1	60	65	35	117	93	63	77	107	99	19	12	7	14	30
.........................................................................................................GTGCATTGTAGTCGCATTGTCAA......................................................................................................................................................................................	23	1	6476.00	6476	2	0	135	10	19	0	17	0	0	0	0	5	35	33	2	1	0	5	0	2	1	5	8	78	287	223	580	247	9	11	4	13	481	1	577	702	1006	517	115	0	1	1	1	2	0	1	0	2	0	1	0	0	1	0	0	0	0	0	0	18	3	2	0	507	325	66	67	19	38	48	34	37	30	43	22	15	8	29	24
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGC............................................................................................................................	21	1	4306.00	4306	73	192	1628	17	4	8	2	1	0	0	0	0	1	0	123	101	67	79	63	36	13	107	115	16	41	41	57	33	114	161	82	147	15	25	9	13	6	3	14	29	0	1	1	0	0	0	0	1	0	0	0	0	0	0	1	3	3	8	2	2	96	51	0	19	69	2	6	6	99	117	56	72	122	105	7	1	4	9	7
.........................................................................................................GTGCATTGTAGTCGCATTGTA........................................................................................................................................................................................	21	1	3401.00	3401	114	505	213	18	3	1	2	1	10	0	7	2	3	3	3	10	4	6	6	5	25	8	13	11	19	20	31	20	14	11	4	13	20	1	36	36	22	24	7	2	6	8	6	8	9	9	6	4	6	2	10	4	3	0	6	3	0	21	5	3	30	11	3	2	15	37	30	32	288	357	273	249	297	298	27	5	13	24	38
..........................................................................................................TGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	20	1	2666.00	2666	7	21	2517	0	3	4	4	0	0	0	1	0	0	0	2	1	0	0	0	2	7	5	0	8	3	1	3	9	2	12	3	2	1	8	0	1	0	0	5	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	2	1	0	3	0	0	0	4	2	3	4	5	2	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTT........................................................................................................................................................................................	21	1	1523.00	1523	61	176	189	4	5	25	5	4	4	8	0	0	0	0	16	19	9	18	22	13	32	29	39	27	8	12	26	25	23	44	23	56	1	42	9	6	4	2	24	41	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	1	127	41	0	4	7	1	1	1	55	58	54	26	42	49	2	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTAA.......................................................................................................................................................................................	22	1	1431.00	1431	3	7	27	0	7	4	6	0	2	1	1	1	6	1	9	3	3	0	2	2	0	3	5	20	63	41	110	59	4	6	1	14	82	1	153	136	236	92	24	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	5	22	7	0	120	47	8	11	6	12	13	8	6	8	5	8	0	1	4	4
.........................................................................................................GTGCATTGTAGTCGCATT...........................................................................................................................................................................................	18	1	1080.00	1080	8	23	163	0	41	62	47	11	3	3	1	0	1	0	17	22	7	21	17	11	26	18	18	97	10	6	8	7	15	30	2	15	2	70	2	2	2	2	35	57	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	4	0	0	0	0	13	2	90	3	18	0	0	0	12	13	9	6	17	10	0	0	0	0	0
......................................................................................................................................................................AATACAACTGCAGTGCAAGCT...........................................................................................................................	21	1	889.00	889	0	0	772	0	1	0	0	0	0	0	0	0	0	0	2	4	1	3	4	0	3	4	2	0	1	3	1	0	6	8	3	7	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	6	0	31	22	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTAAA......................................................................................................................................................................................	23	1	814.00	814	0	2	20	1	2	0	1	0	1	0	0	0	4	2	0	0	0	0	1	0	1	0	0	10	24	9	54	15	0	0	0	1	40	1	36	46	106	34	16	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	5	0	0	108	63	35	71	17	0	2	1	2	0	2	12	10	8	21	27
.....................................................................................................................................................................CAATACAACTGCAGTGCAAG.............................................................................................................................	20	1	647.00	647	4	5	239	3	0	0	1	0	0	0	0	1	1	1	23	12	9	12	15	4	9	22	10	3	13	9	18	11	17	23	27	40	4	2	4	8	5	7	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	11	10	0	1	1	4	4	3	13	5	4	6	3	2	3	2	4	2	3
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCTC..........................................................................................................................	23	1	522.00	522	27	20	162	1	2	4	0	0	0	0	0	0	0	0	30	29	4	7	4	9	6	10	23	2	3	2	3	2	34	14	12	36	1	3	0	0	0	0	1	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	8	0	14	7	0	0	0	2	3	4	10	8	4	0	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGT.........................................................................................................................................................................................	19	1	485.00	485	0	0	467	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	1	5	1	2	0	1	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCTT..........................................................................................................................	23	1	484.00	484	8	35	192	0	0	1	0	0	0	0	0	0	0	0	18	16	6	9	5	3	1	6	17	1	4	3	2	1	15	12	2	11	0	12	0	0	0	0	6	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	13	40	0	9	5	0	0	0	7	4	3	2	2	6	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCAAA.....................................................................................................................................................................................	24	1	481.00	481	0	0	30	6	1	0	0	0	0	0	0	0	5	1	0	0	0	0	0	0	1	0	0	2	15	7	39	4	0	0	0	0	16	0	9	22	50	15	7	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	2	0	0	0	41	30	50	46	15	5	4	1	1	7	1	10	7	9	13	7
.........................................................................................................GTGCATTGTAGTCGCATTGTCG.......................................................................................................................................................................................	22	1	420.00	420	16	42	26	1	1	11	8	0	2	0	0	2	2	2	1	2	0	1	1	2	1	2	6	14	5	5	15	13	6	8	3	14	4	10	18	5	16	4	13	8	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	25	12	0	3	5	12	5	2	7	8	9	5	5	9	3	4	1	3	6
..........................................................................................................TGCATTGTAGTCGCATTGTCC.......................................................................................................................................................................................	21	1	404.00	404	1	0	392	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	1	0	1	0	0	0	0	1	0	0	0	1	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1
..........................................................................................................TGCATTGTAGTCGCATTG..........................................................................................................................................................................................	18	1	256.00	256	0	2	251	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................GCATTGTAGTCGCATTGTC........................................................................................................................................................................................	19	1	207.00	207	13	11	97	4	0	2	2	0	0	0	0	0	0	0	1	2	0	3	1	2	1	3	0	6	1	3	3	3	1	7	0	1	0	2	1	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	1	0	0	0	2	1	0	0	0	0	0	0	2	3	3	8	4	5	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCCC......................................................................................................................................................................................	23	1	184.00	184	8	11	34	0	0	1	0	0	0	0	0	0	0	0	4	6	0	1	4	2	2	4	5	0	0	0	1	0	4	12	6	18	0	1	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	9	4	7	17	9	9	0	0	0	0	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAA..............................................................................................................................	19	1	184.00	184	0	1	40	1	0	0	0	0	0	0	0	0	0	0	9	9	2	9	7	3	0	10	3	2	1	2	5	1	10	12	7	15	4	1	3	1	2	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	0	0	0	0	0	3	0	0	0	3	0	2	3	0	0	1	0	1
............................................................................................................CATTGTAGTCGCATTGTC........................................................................................................................................................................................	18	1	176.00	176	5	25	30	2	4	0	11	0	0	0	0	0	0	0	1	3	0	1	0	2	2	0	1	9	4	2	2	2	2	5	4	2	0	3	0	0	0	0	4	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	3	2	0	0	0	8	9	3	9	4	3	1	0	0	0	0
......................................................................................................................................................................AATACAACTGCAGTGCAAGC............................................................................................................................	20	1	167.00	167	0	0	136	0	0	0	0	0	0	0	0	0	0	0	1	0	0	2	3	1	0	0	2	0	2	1	0	0	3	2	3	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGA.........................................................................................................................................................................................	20	1	158.00	158	2	4	34	0	1	2	0	1	0	0	0	0	0	0	2	1	0	1	1	1	0	1	1	5	3	0	6	0	6	1	0	8	1	1	3	2	3	3	1	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	12	5	0	0	1	9	7	3	0	2	0	0	2	0	3	1	2	5	8
..........................................................................................................TGCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	21	1	158.00	158	0	0	152	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCCT......................................................................................................................................................................................	23	1	157.00	157	3	9	21	0	0	1	0	0	0	0	0	0	0	1	3	3	1	0	1	3	0	3	6	0	0	2	0	0	15	12	4	13	0	2	0	0	0	0	0	11	0	1	0	0	0	2	1	1	0	0	0	0	0	0	0	0	1	2	0	0	2	1	0	0	0	1	6	0	2	0	7	6	6	1	2	0	0	0	1
.........................................................................................................GTGCATTGTAGTCGCATTGC.........................................................................................................................................................................................	20	1	137.00	137	6	35	1	8	1	3	2	0	0	0	0	0	0	0	0	2	0	0	2	0	5	0	0	8	1	2	0	0	1	0	1	3	1	5	1	0	1	1	2	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	30	4	0	0	3	0	0	0	0	0	0	0	0	0	1	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTT......................................................................................................................................................................................	23	1	118.00	118	3	3	21	0	0	0	1	0	0	0	0	0	0	0	3	2	0	6	4	3	2	1	5	1	0	0	6	6	3	9	5	6	2	0	0	1	2	3	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	2	0	3	0	2	0	0	2	2	0	1	1	1	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTTC.......................................................................................................................................................................................	22	1	116.00	116	6	17	19	0	0	1	0	0	0	0	0	0	0	0	5	3	0	1	0	0	2	1	3	0	0	0	1	1	6	10	3	9	0	0	1	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	4	0	0	0	1	1	0	0	0	0	2	0	5	6	0	0	0	0	1
.........................................................................................................GTGCATTGTAGTCGCATTGTG........................................................................................................................................................................................	21	1	105.00	105	2	14	9	1	0	1	1	2	0	1	2	0	0	0	0	17	1	1	0	0	10	1	2	0	0	0	0	3	1	0	0	2	1	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	7	0	0	0	0	1	3	0	4	2	3	1	4	3	0	0	0	0	1
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCC...........................................................................................................................	22	1	97.00	97	2	17	26	3	0	0	0	0	0	0	0	0	0	0	2	2	0	4	0	2	0	3	5	0	0	1	2	1	3	4	2	3	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	2	1	0	0	0	0	0	2	2	1	2	0	0	0	0	0
........................................................................................................GGTGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	22	1	96.00	96	4	4	24	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	1	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	8	12	1	2	22	11	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCCA......................................................................................................................................................................................	23	1	95.00	95	0	0	9	0	1	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	1	0	1	0	0	2	3	1	1	5	0	3	2	0	1	12	12	10	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	3	4	4	5	0	2	2	0	0	0	0	1	0	0	1	0
.........................................................................................................GTGCATTGTAGTCGCATTGG.........................................................................................................................................................................................	20	1	91.00	91	18	47	5	0	1	1	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	2	0	0	1	0	1	1	1	0	1	0	1	0	0	0	0	0	0
....................................................................................TCT-CTGGAGCTGTTACGGAG.............................................................................................................................................................................................................	20	1	88.00	88	0	0	2	0	2	1	2	2	9	2	2	0	0	0	0	1	0	1	0	0	2	1	4	2	1	5	3	3	5	5	4	8	0	1	0	0	0	0	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	1	0	0	0	0	2	2	0	0	6	0	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	21	1	86.00	86	0	0	64	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	5	0	8	1	2	0	0	0	0	0
.......................................................................................................................................................................ATACAACTGCAGTGCAAGCT...........................................................................................................................	20	1	75.00	75	0	1	67	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................CAATACAACTGCAGTGCT...............................................................................................................................	18	1	67.00	67	0	66	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTA......................................................................................................................................................................................	23	1	64.00	64	0	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	2	4	1	0	0	0	0	3	0	2	7	6	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	4	0	5	3	2	0	0	3	2	2	0	1	0
.....................................................................................................................................................................CAATACAACTGCAGTGCA...............................................................................................................................	18	1	59.00	59	3	15	3	0	1	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	3	2	6	2	0	0	0	0	3	4	2	2	0	4	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	4	0	1	0	0	0	0
..............................................................................................................................TGTCTC--A-AAT----------T--T--G-C-CCGCGG.................................................................................................................................................	20	1	52.00	52	0	0	11	0	3	2	3	0	0	0	1	0	0	0	0	0	0	0	0	0	2	0	0	5	1	1	4	1	2	3	2	0	0	0	0	1	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	1	0	0	1	0	1	1	0	0	0	0	0	0	0	0	0
...........................................................................................................GCATTGTAGTCGCATTGT.........................................................................................................................................................................................	18	1	47.00	47	0	0	25	0	0	0	2	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	1	1	2	0	1	0	2	3	1	2	0	2	0	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTTA.......................................................................................................................................................................................	22	1	45.00	45	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	3	4	2	0	1	4	0	0	0	0	2	5	2	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	1	0	1	1	0	0	0	1	1	2	0	1	2	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCAT............................................................................................................................................................................................	17	1	43.00	43	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	1	0	1	0	2	0	0	2	0	1	3	24	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCAT......................................................................................................................................................................................	23	1	40.00	40	0	0	4	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	2	0	2	0	1	2	0	0	0	0	0	0	4	0	4	3	4	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	3	3	0	0	1	2	0	0	0	0	0	0	0	0	0	0
...........................................................................................................GCATTGTAGTCGCATTGTCC.......................................................................................................................................................................................	20	1	39.00	39	0	1	28	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	1	1	0	0	0	0	0	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................ACAACTGCAGTGCAAGCT...........................................................................................................................	18	1	34.00	34	0	0	28	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGAA........................................................................................................................................................................................	21	1	33.00	33	0	4	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	0	0	0	5	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	3	2	2	0	1	0	0	0	0	0	0	0	1	4	0
.........................................................................................................GTGCATTGTAGTCGCATTT..........................................................................................................................................................................................	19	1	30.00	30	0	1	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	2	0	0	1	0	0	2	0	4	0	3	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................ATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	18	1	28.00	28	0	0	0	0	0	2	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	2	0	1	2	0	1	1	1	2	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	1	0	1	0	0	0	0	0	0	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGT............................................................................................................................	21	1	26.00	26	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	1	0	0	0	3	1	0	0	0	1	0	0	1	3	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	2	3	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0
......................................................................................................................................................................AATACAACTGCAGTGCAAGCTT..........................................................................................................................	22	1	26.00	26	0	0	21	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGAAA.......................................................................................................................................................................................	22	2	24.00	48	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	2	0	0	0	0	0	0	0	0	9	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	11	7	1	0	0	0	0	0	0	1	1	0	1	4
........................................................................................................................................................................TACAACTGCAGTGCAAGCT...........................................................................................................................	19	1	23.00	23	0	0	21	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......................................................................................................................................................................ATACAACTGCAGTGCAAGC............................................................................................................................	19	1	23.00	23	0	0	20	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTAG.......................................................................................................................................................................................	22	1	22.00	22	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	1	0	1	1	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	2	4	1	1	0	0	0	0	0	1	0	0	0	1
.........................................................................................................GTGCATTGTAGTCGCATTGTCTAA.....................................................................................................................................................................................	24	1	22.00	22	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	1	0	2	0	1	1	2	0	1	0	1	0	3	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	1	0	0	0	0	0	0	0	0	0	0	0	1
.....................................................................................................................................................................CAATACAACTGCAGTGCAT..............................................................................................................................	19	1	22.00	22	0	5	2	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	2	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0
......................................................................................................................................................................AATACAACTGCAGTGCAAG.............................................................................................................................	19	1	21.00	21	0	0	17	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTAAA....................................................................................................................................................................................	25	1	20.00	20	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	2	0	1	0	2	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	2	0	0	0	3	1	0	0	0	0	1	0	1
.........................................................................................................GTGCATTGTAGTCGCATTGTCCCC.....................................................................................................................................................................................	24	1	20.00	20	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	1	0	0	1	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	3	0	0	2	0	2	0	0	0	0	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCTA..........................................................................................................................	23	1	20.00	20	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	1	0	3	1	3	6	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTC......................................................................................................................................................................................	23	1	19.00	19	3	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	1	2	0	3	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTA..........................................................................................................................................................................................	19	1	19.00	19	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	1	0	2	1	1	4	0	1	0	2	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0
...........................................................................................................GCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	20	1	18.00	18	0	0	11	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	0
.............................................................................................................ATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	18	1	18.00	18	5	4	2	0	0	0	1	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................AATACAACTGCAGTGCAAGCTC..........................................................................................................................	22	1	18.00	18	0	0	12	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTA........................................................................................................................................................................................	20	1	18.00	18	0	0	18	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................CATTGTAGTCGCATTGTCC.......................................................................................................................................................................................	19	1	17.00	17	0	1	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	1	0	0	0	1	0	0	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTTAA......................................................................................................................................................................................	23	1	17.00	17	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	1	0	0	0	0	2	0	0	1	1	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	1	0	0	0	0	0	0	0	0	2
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCG...........................................................................................................................	22	1	16.00	16	1	4	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	2	0	0	0	0	1	0	1	0	0	0	0	0	0	0
.............................................................................................................ATTGTAGTCGCATTGTCC.......................................................................................................................................................................................	18	1	16.00	16	1	1	1	0	2	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	3	0	1	1	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTG......................................................................................................................................................................................	23	1	16.00	16	1	0	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	1	0	3	0	0	0	0
............................................................................................................CATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	19	1	15.00	15	2	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	1	1	3	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTGTCT...................................................................................................................................................................................	26	1	13.00	13	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	4	1	1	2	1	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCAC......................................................................................................................................................................................	23	1	13.00	13	0	1	0	1	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0
....................................................................................................................................................................GCAATACAACTGCAGTGCAAGCT...........................................................................................................................	23	1	13.00	13	0	0	13	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGA............................................................................................................................	21	1	12.00	12	0	0	3	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	0	1

droMoj3

TG---------GAGCACTGCC---------------------C--CGTTTATGCAGCA----T---TCCGAC---A--------TCT-TTGGAGCTGTGACGGAGGTGCATTGTAGTCGCATTGTCTGTATC--C---T----------TTATT-C-T-CTGCGGCAATACAACTGCAGTGCAAGCTCCGTGCAGTTCACTCG-CAACGTCGGACACCT-------TAGA-------------------ATAAAGATAAT---------------------------GTATGTTA------------T--	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
.........................................................................................................GTGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	21	1	168612.00	168612	129700	443	10454	14008	4842	9165
.........................................................................................................GTGCATTGTAGTCGCATTGT.........................................................................................................................................................................................	20	1	51029.00	51029	29773	58	5937	8002	84	7175
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCT...........................................................................................................................	22	1	36330.00	36330	30812	59	1064	1467	512	2416
..........................................................................................................TGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	20	1	9871.00	9871	9860	1	2	3	4	1
.........................................................................................................GTGCATTGTAGTCGCATTG..........................................................................................................................................................................................	19	1	8490.00	8490	7453	20	353	426	9	229
.........................................................................................................GTGCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	22	1	5352.00	5352	3875	22	395	562	152	346
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGC............................................................................................................................	21	1	4036.00	4036	3573	15	102	134	153	59
.........................................................................................................GTGCATTGTAGTCGCATTGTCC.......................................................................................................................................................................................	22	1	3484.00	3484	2942	6	152	166	60	158
.........................................................................................................GTGCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	22	1	3342.00	3342	2860	143	77	98	74	90
......................................................................................................................................................................AATACAACTGCAGTGCAAGCT...........................................................................................................................	21	1	2764.00	2764	2725	0	9	8	1	21
..........................................................................................................TGCATTGTAGTCGCATTGT.........................................................................................................................................................................................	19	1	2295.00	2295	2295	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTT........................................................................................................................................................................................	21	1	1878.00	1878	1165	2	197	289	12	213
...........................................................................................................GCATTGTAGTCGCATTGTC........................................................................................................................................................................................	19	1	643.00	643	620	0	2	5	1	15
.........................................................................................................GTGCATTGTAGTCGCATTGTA........................................................................................................................................................................................	21	1	638.00	638	484	22	26	27	53	26
..........................................................................................................TGCATTGTAGTCGCATTG..........................................................................................................................................................................................	18	1	613.00	613	613	0	0	0	0	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCTT..........................................................................................................................	23	1	592.00	592	408	0	41	63	4	76
.........................................................................................................GTGCATTGTAGTCGCATT...........................................................................................................................................................................................	18	1	565.00	565	434	0	61	54	1	15
.........................................................................................................GTGCATTGTAGTCGCATTGTCTC......................................................................................................................................................................................	23	1	399.00	399	370	0	10	14	0	5
..........................................................................................................TGCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	21	1	346.00	346	346	0	0	0	0	0
......................................................................................................................................................................AATACAACTGCAGTGCAAGC............................................................................................................................	20	1	315.00	315	311	0	3	1	0	0
.......................................................................................................................................................................ATACAACTGCAGTGCAAGCT...........................................................................................................................	20	1	258.00	258	249	0	0	0	1	8
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCTC..........................................................................................................................	23	1	244.00	244	218	1	8	8	3	6
..........................................................................................................TGCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	21	1	239.00	239	239	0	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTCC.......................................................................................................................................................................................	21	1	220.00	220	220	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCG.......................................................................................................................................................................................	22	1	218.00	218	72	0	45	75	0	26
.....................................................................................................................................................................CAATACAACTGCAGTGCAAG.............................................................................................................................	20	1	205.00	205	162	1	6	13	6	17
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCC...........................................................................................................................	22	1	180.00	180	54	0	4	4	115	3
.........................................................................................................GTGCATTGTAGTCGCATTGTCAA......................................................................................................................................................................................	23	1	174.00	174	108	32	4	6	16	8
.........................................................................................................GTGCATTGTAGTCGCATTGA.........................................................................................................................................................................................	20	1	145.00	145	115	3	8	13	0	6
........................................................................................................GGTGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	22	1	134.00	134	112	2	4	9	4	3
.........................................................................................................GTGCATTGTAGTCGCATTGC.........................................................................................................................................................................................	20	1	113.00	113	13	0	19	41	31	9
...........................................................................................................GCATTGTAGTCGCATTGT.........................................................................................................................................................................................	18	1	109.00	109	107	0	1	1	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTAA.......................................................................................................................................................................................	22	1	107.00	107	63	5	9	19	4	7
..........................................................................................................TGCATTGTAGTCGCATTGTT........................................................................................................................................................................................	20	1	98.00	98	97	0	0	0	0	1
.........................................................................................................GTGCATTGTAGTCGCATTGTTC.......................................................................................................................................................................................	22	2	87.00	174	156	0	2	10	0	6
.........................................................................................................GTGCATTGTAGTCGCATTGTCTT......................................................................................................................................................................................	23	1	57.00	57	52	0	1	1	2	1
.....................................................................................................................................................................CAATACAACTGCAGTGCAA..............................................................................................................................	19	1	56.00	56	53	0	0	2	0	1
............................................................................................................CATTGTAGTCGCATTGTC........................................................................................................................................................................................	18	1	56.00	56	48	0	1	0	5	2
.........................................................................................................GTGCATTGTAGTCGCATTGTCCC......................................................................................................................................................................................	23	1	48.00	48	42	0	2	0	0	4
.........................................................................................................................................................................ACAACTGCAGTGCAAGCT...........................................................................................................................	18	1	44.00	44	44	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTT..........................................................................................................................................................................................	19	1	43.00	43	18	0	15	7	0	3
..........................................................................................................TGCATTGTAGTCGCATTGTCTC......................................................................................................................................................................................	22	1	39.00	39	39	0	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTA........................................................................................................................................................................................	20	1	39.00	39	39	0	0	0	0	0
........................................................................................................................................................................TACAACTGCAGTGCAAGCT...........................................................................................................................	19	1	36.00	36	35	0	1	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGG.........................................................................................................................................................................................	20	1	36.00	36	17	0	8	10	0	1
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGT............................................................................................................................	21	1	34.00	34	22	0	1	6	0	5
.........................................................................................................GTGCATTGTAGTCGCATTGTCCT......................................................................................................................................................................................	23	1	31.00	31	27	0	1	3	0	0
......................................................................................................................................................................AATACAACTGCAGTGCAAGCTT..........................................................................................................................	22	1	30.00	30	28	0	1	0	0	1
........................................................................................................GGTGCATTGTAGTCGCATTGT.........................................................................................................................................................................................	21	1	29.00	29	17	0	2	1	0	9
..............................................................................................................................TGTATC--C---T----------TTATT-C-T-CTGCGG.................................................................................................................................................	21	1	28.00	28	14	0	4	1	4	5
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCTA..........................................................................................................................	23	1	27.00	27	23	0	0	0	4	0
.........................................................................................................GTGCATTGTAGTCGCATTC..........................................................................................................................................................................................	19	1	26.00	26	21	0	0	3	0	2
.........................................................................................................GTGCATTGTAGTCGCATTGTG........................................................................................................................................................................................	21	2	25.00	50	34	0	5	8	2	1
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCA...........................................................................................................................	22	1	25.00	25	19	0	2	0	3	1
.......................................................................................................................................................................ATACAACTGCAGTGCAAGC............................................................................................................................	19	1	24.00	24	24	0	0	0	0	0
....................................................................................................................................................................GCAATACAACTGCAGTGCAAGCT...........................................................................................................................	23	1	23.00	23	23	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCAAA.....................................................................................................................................................................................	24	1	21.00	21	14	3	0	0	4	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCTG..........................................................................................................................	23	1	19.00	19	19	0	0	0	0	0
...........................................................................................................GCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	20	1	19.00	19	18	0	0	0	0	1
......................................................................................................................................................................AATACAACTGCAGTGCAAG.............................................................................................................................	19	1	19.00	19	17	0	1	0	0	1
.........................................................................................................GTGCATTGTAGTCGCATTGAA........................................................................................................................................................................................	21	1	16.00	16	4	1	3	4	2	2
.........................................................................................................GTGCATTGTAGTCGCATTGTCTG......................................................................................................................................................................................	23	1	15.00	15	11	0	0	4	0	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCTTT.........................................................................................................................	24	1	15.00	15	12	0	2	1	0	0
......................................................................................................................................................................AATACAACTGCAGTGCAAGCTC..........................................................................................................................	22	1	15.00	15	14	0	0	0	0	1
.....................................................................................................................................................................CAATACAACTGCAGTGCATC.............................................................................................................................	20	2	14.50	29	17	0	5	3	0	4
.........................................................................................................GTGCATTGTAGTCGCATTGTCTCC.....................................................................................................................................................................................	24	1	14.00	14	14	0	0	0	0	0
...........................................................................................................GCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	20	1	13.00	13	13	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTTA.......................................................................................................................................................................................	22	1	12.00	12	9	0	0	1	1	1
...........................................................................................................GCATTGTAGTCGCATTGTT........................................................................................................................................................................................	19	1	12.00	12	11	0	0	0	0	1
.....................................................................................................................................................................CAATACAACTGCAGTGCAT..............................................................................................................................	19	1	12.00	12	7	0	0	5	0	0
..........................................................................................................TGCATTGTAGTCGCATTGA.........................................................................................................................................................................................	19	1	11.00	11	11	0	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTCAA......................................................................................................................................................................................	22	1	11.00	11	11	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTAAA......................................................................................................................................................................................	23	4	11.00	44	32	3	1	5	0	3
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCG...........................................................................................................................	22	1	10.00	10	3	1	2	2	0	2
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCTTTT........................................................................................................................	25	1	9.00	9	8	0	0	0	0	1
.........................................................................................................GTGCATTGTAGTCGCATTA..........................................................................................................................................................................................	19	1	9.00	9	5	0	1	2	0	1
...........................................................................................................GCATTGTAGTCGCATTGTCC.......................................................................................................................................................................................	20	1	9.00	9	9	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCAT......................................................................................................................................................................................	23	1	9.00	9	5	1	0	1	1	1
........................................................................................................GGTGCATTGTAGTCGCATTG..........................................................................................................................................................................................	20	1	8.00	8	7	0	0	0	0	1
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCTTG.........................................................................................................................	24	1	8.00	8	8	0	0	0	0	0
....................................................................................TCT-TTGGAGCTGTGACGGAG.............................................................................................................................................................................................................	20	1	8.00	8	5	1	0	1	0	1
.....................................................................................................................................................................CAATACAACTGCAGTGCA...............................................................................................................................	18	1	8.00	8	5	0	1	2	0	0

droWil2

CA--------TTAAAGATCACATCG----------------------AGTAGACGGAACCTAA---ACAAAT------------------TGAAGTTACACGAAGGTGCATTGTAGTCGCATTGTCTGTGCTCCAAAAAAAAAAAACCCCCAGTTTCTATTCAGGCAATACAACTGCAGTGCAAGCTTCGTGTGACTTATAAG-CAACGGCAAATAGGT----TCAAAGG-----------------------------------------------------------ATATTCTCAACTAGA-A--AC	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.........................................................................................................GTGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	21	1	232621.00	232621	198093	22236	645	3455	8192
.........................................................................................................GTGCATTGTAGTCGCATTGT.........................................................................................................................................................................................	20	1	11148.00	11148	2132	4413	668	660	3275
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCT...........................................................................................................................	22	1	5700.00	5700	160	2204	30	543	2763
.........................................................................................................GTGCATTGTAGTCGCATTG..........................................................................................................................................................................................	19	1	5022.00	5022	1616	2850	34	115	407
.........................................................................................................GTGCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	22	1	3997.00	3997	2336	904	32	121	604
..........................................................................................................TGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	20	1	1880.00	1880	159	1714	0	2	5
.........................................................................................................GTGCATTGTAGTCGCATTGTCC.......................................................................................................................................................................................	22	1	1375.00	1375	607	541	3	13	211
.........................................................................................................GTGCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	22	1	1231.00	1231	259	524	5	354	89
.........................................................................................................GTGCATTGTAGTCGCATTGTA........................................................................................................................................................................................	21	1	910.00	910	693	115	0	42	60
.........................................................................................................GTGCATTGTAGTCGCATTGTT........................................................................................................................................................................................	21	1	825.00	825	489	207	20	5	104
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGC............................................................................................................................	21	1	687.00	687	124	417	4	26	116
..........................................................................................................TGCATTGTAGTCGCATTGT.........................................................................................................................................................................................	19	1	355.00	355	1	353	0	0	1
.........................................................................................................GTGCATTGTAGTCGCATT...........................................................................................................................................................................................	18	1	285.00	285	132	111	0	11	31
..........................................................................................................TGCATTGTAGTCGCATTG..........................................................................................................................................................................................	18	1	247.00	247	5	240	0	1	1
.........................................................................................................GTGCATTGTAGTCGCATTGTCTG......................................................................................................................................................................................	23	1	225.00	225	47	115	3	19	41
.........................................................................................................GTGCATTGTAGTCGCATTGTCAA......................................................................................................................................................................................	23	1	222.00	222	0	53	0	166	3
...........................................................................................................GCATTGTAGTCGCATTGTC........................................................................................................................................................................................	19	1	219.00	219	90	112	4	6	7
......................................................................................................................................................................AATACAACTGCAGTGCAAGCT...........................................................................................................................	21	1	211.00	211	2	178	0	7	24
.........................................................................................................GTGCATTGTAGTCGCATTGG.........................................................................................................................................................................................	20	1	138.00	138	133	2	0	0	3
.........................................................................................................GTGCATTGTAGTCGCATTGC.........................................................................................................................................................................................	20	1	114.00	114	99	2	3	0	10
............................................................................................................CATTGTAGTCGCATTGTC........................................................................................................................................................................................	18	1	106.00	106	82	24	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTAA.......................................................................................................................................................................................	22	1	100.00	100	5	15	0	76	4
..........................................................................................................TGCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	21	1	77.00	77	6	71	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCG.......................................................................................................................................................................................	22	1	75.00	75	43	8	6	5	13
.....................................................................................................................................................................CAATACAACTGCAGTGCAAG.............................................................................................................................	20	1	68.00	68	4	46	0	9	9
.........................................................................................................GTGCATTGTAGTCGCATTGTCCC......................................................................................................................................................................................	23	1	63.00	63	13	38	0	0	12
.......................................................................................................AGGTGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	23	1	50.00	50	29	6	0	5	10
..........................................................................................................TGCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	21	1	42.00	42	0	41	0	1	0
..........................................................................................................TGCATTGTAGTCGCATTGTCC.......................................................................................................................................................................................	21	1	38.00	38	2	36	0	0	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCTC..........................................................................................................................	23	1	37.00	37	21	9	0	0	7
....................................................................................................................................................................GCAATACAACTGCAGTGCAAGC............................................................................................................................	22	1	36.00	36	0	33	0	0	3
.........................................................................................................GTGCATTGTAGTCGCATTGA.........................................................................................................................................................................................	20	1	34.00	34	5	19	0	5	5
......................................................................................................................................................................AATACAACTGCAGTGCAAGC............................................................................................................................	20	1	33.00	33	0	32	0	0	1
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCTT..........................................................................................................................	23	1	31.00	31	4	12	0	1	14
...........................................................................................................GCATTGTAGTCGCATTGT.........................................................................................................................................................................................	18	1	31.00	31	0	29	0	0	2
........................................................................................................GGTGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	22	1	27.00	27	12	13	0	0	2
.........................................................................................................GTGCATTGTAGTCGCATTGTG........................................................................................................................................................................................	21	1	26.00	26	19	5	0	0	2
.........................................................................................................GTGCATTGTAGTCGCATTGTAAA......................................................................................................................................................................................	23	2	26.00	52	0	9	0	43	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCC...........................................................................................................................	22	1	26.00	26	16	8	0	0	2
.........................................................................................................GTGCATTGTAGTCGCATTGTCTT......................................................................................................................................................................................	23	1	25.00	25	4	19	0	1	1
.......................................................................................................AGGTGCATTGTAGTCGCATTGT.........................................................................................................................................................................................	22	1	23.00	23	2	1	0	5	15
.......................................................................................................................................................................ATACAACTGCAGTGCAAGCT...........................................................................................................................	20	1	22.00	22	2	17	0	3	0
....................................................................................................................................................................GCAATACAACTGCAGTGCAAG.............................................................................................................................	21	1	19.00	19	0	17	0	1	1
.........................................................................................................GTGCATTGTAGTCGCATTT..........................................................................................................................................................................................	19	1	19.00	19	1	16	0	1	1
.........................................................................................................GTGCATTGTAGTCGCATTGTCTC......................................................................................................................................................................................	23	1	18.00	18	14	3	0	0	1
.........................................................................................................GTGCATTGTAGTCGCATTGTTC.......................................................................................................................................................................................	22	1	17.00	17	9	8	0	0	0
............................................................................................................CATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	19	1	16.00	16	14	1	0	0	1
..........................................................................................................TGCATTGTAGTCGCATTGTT........................................................................................................................................................................................	20	1	16.00	16	0	16	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTCTG......................................................................................................................................................................................	22	1	14.00	14	0	14	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCCT......................................................................................................................................................................................	23	1	14.00	14	8	4	0	0	2
.............................................................................................................ATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	18	1	13.00	13	13	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTC..........................................................................................................................................................................................	19	1	12.00	12	0	10	0	0	2
.....................................................................................................................................................................CAATACAACTGCAGTGCAA..............................................................................................................................	19	1	11.00	11	0	8	0	2	1
..........................................................................................................TGCATTGTAGTCGCATTGTCAA......................................................................................................................................................................................	22	1	9.00	9	0	9	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCAAA.....................................................................................................................................................................................	24	1	7.00	7	0	3	0	4	0
...........................................................................................................GCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	20	1	7.00	7	3	4	0	0	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCG...........................................................................................................................	22	1	7.00	7	5	1	0	0	1
........................................................................................................................................................................TACAACTGCAGTGCAAGCT...........................................................................................................................	19	1	6.00	6	0	5	0	0	1
.....................................................................................................................................................................CAATACAACTGCAGTGCA...............................................................................................................................	18	1	6.00	6	1	4	0	1	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGT............................................................................................................................	21	1	5.00	5	0	2	0	2	1
.........................................................................................................GTGCATTGTAGTCGCATTGTCCA......................................................................................................................................................................................	23	1	5.00	5	0	4	0	0	1
.........................................................................................................................................................................ACAACTGCAGTGCAAGCT...........................................................................................................................	18	1	5.00	5	0	4	0	0	1
......................................................................................................................................................................AATACAACTGCAGTGCAAG.............................................................................................................................	19	1	5.00	5	0	4	0	0	1
.......................................................................................................................................................................ATACAACTGCAGTGCAAGC............................................................................................................................	19	1	5.00	5	0	5	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTGT.....................................................................................................................................................................................	24	1	5.00	5	0	3	0	1	1
.............................................................................................................ATTGTAGTCGCATTGTCC.......................................................................................................................................................................................	18	1	5.00	5	5	0	0	0	0
....................................................................AAAT------------------TGAAGTTACACGAAG.............................................................................................................................................................................................................	19	2	4.50	9	0	0	0	8	1
.......................................................................................................AGGTGCATTGTAGTCGCATTG..........................................................................................................................................................................................	21	1	4.00	4	2	0	0	0	2
...........................................................................................................GCATTGTAGTCGCATTGTT........................................................................................................................................................................................	19	1	4.00	4	3	1	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTCCC......................................................................................................................................................................................	22	1	4.00	4	0	4	0	0	0
........................................................................................................GGTGCATTGTAGTCGCATTGT.........................................................................................................................................................................................	21	1	4.00	4	0	3	0	0	1
..........................................................................................................TGCATTGTAGTCGCATTGTA........................................................................................................................................................................................	20	1	4.00	4	0	4	0	0	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCA...........................................................................................................................	22	1	4.00	4	0	3	0	0	1
..........................................................................................................TGCATTGTAGTCGCATTGTCTT......................................................................................................................................................................................	22	1	4.00	4	0	4	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATG...........................................................................................................................................................................................	18	1	4.00	4	4	0	0	0	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCTTT.........................................................................................................................	24	1	4.00	4	0	4	0	0	0
............................................................................................................CATTGTAGTCGCATTGTCC.......................................................................................................................................................................................	19	1	3.00	3	3	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTTAA......................................................................................................................................................................................	23	1	3.00	3	0	0	0	3	0
....................................................................................................................................................................GCAATACAACTGCAGTGCAAGCT...........................................................................................................................	23	1	3.00	3	0	3	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTTCC......................................................................................................................................................................................	23	1	3.00	3	1	2	0	0	0
...........................................................................................................GCATTGTAGTCGCATTGTCC.......................................................................................................................................................................................	20	1	3.00	3	2	1	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCGA......................................................................................................................................................................................	23	1	3.00	3	3	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGAAA.......................................................................................................................................................................................	22	2	3.00	6	0	2	0	4	0

dp5

GT--------GTAACAATCTGCATT----------------------TGATCAAAAAACCAAA---CCAAACA-----------CTC-CCGGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTCCA--T---C----------T--T--G-ATTTCAGGCAATACAACTGCAATGCAAGCTCTGTGCATTTCATAAATCAACGCCGTCC----AATGTCGCTGGTCCAGTTTCAG-----------------------------------------TCC-------------CTGCCCCGGT--	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
.........................................................................................................GTGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	21	1	188132.00	188132	9904	153402	1169	8943	698	7939	3934	978	766	399
.........................................................................................................GTGCATTGTAGTCGCATTGT.........................................................................................................................................................................................	20	1	25204.00	25204	128	20057	33	277	148	2073	1890	340	184	74
.........................................................................................................GTGCATTGTAGTCGCATTG..........................................................................................................................................................................................	19	1	13688.00	13688	77	13222	3	14	39	197	73	26	33	4
..........................................................................................................TGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	20	1	11872.00	11872	3	11862	0	4	0	2	1	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	22	1	9222.00	9222	68	8497	20	49	262	112	74	127	12	1
.........................................................................................................GTGCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	22	1	7398.00	7398	257	6163	35	467	26	155	188	41	58	8
.....................................................................................................................................................................CAATACAACTGCAATGCAAGCT...........................................................................................................................	22	1	5747.00	5747	3	3840	148	375	42	233	1080	5	18	3
.........................................................................................................GTGCATTGTAGTCGCATTGTCC.......................................................................................................................................................................................	22	1	1957.00	1957	21	1362	12	447	3	79	18	8	7	0
.........................................................................................................GTGCATTGTAGTCGCATTGTA........................................................................................................................................................................................	21	1	1641.00	1641	92	1372	11	62	29	35	19	18	3	0
..........................................................................................................TGCATTGTAGTCGCATTGT.........................................................................................................................................................................................	19	1	1500.00	1500	0	1500	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTT........................................................................................................................................................................................	21	1	1474.00	1474	53	1193	2	22	1	82	98	6	15	2
..........................................................................................................TGCATTGTAGTCGCATTG..........................................................................................................................................................................................	18	1	1127.00	1127	0	1127	0	0	0	0	0	0	0	0
.....................................................................................................................................................................CAATACAACTGCAATGCAAGC............................................................................................................................	21	1	1078.00	1078	1	813	44	185	5	9	8	0	11	2
..........................................................................................................TGCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	21	1	622.00	622	0	621	0	1	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCAA......................................................................................................................................................................................	23	1	608.00	608	0	532	6	1	29	14	5	20	0	1
...........................................................................................................GCATTGTAGTCGCATTGTC........................................................................................................................................................................................	19	1	547.00	547	7	536	1	0	0	2	1	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	21	1	467.00	467	0	466	0	0	0	0	1	0	0	0
..............................................................................................................................TGTCCA--T---C----------T--T--G-ATTTCAGG.................................................................................................................................................	19	1	404.00	404	0	310	7	3	66	4	1	6	2	5
.........................................................................................................GTGCATTGTAGTCGCATTGTCTG......................................................................................................................................................................................	23	1	383.00	383	2	353	0	1	1	14	7	1	4	0
.........................................................................................................GTGCATTGTAGTCGCATT...........................................................................................................................................................................................	18	1	347.00	347	21	271	0	12	0	39	0	3	1	0
......................................................................................................................................................................AATACAACTGCAATGCAAGCT...........................................................................................................................	21	1	347.00	347	0	320	1	8	0	2	16	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTAA.......................................................................................................................................................................................	22	1	257.00	257	3	194	1	0	8	20	11	20	0	0
.........................................................................................................GTGCATTGTAGTCGCATTT..........................................................................................................................................................................................	19	1	215.00	215	0	207	0	1	0	6	0	0	1	0
.....................................................................................................................................................................CAATACAACTGCAATGCAAGCC...........................................................................................................................	22	1	157.00	157	0	16	38	101	0	0	2	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTT......................................................................................................................................................................................	23	1	155.00	155	0	147	1	0	0	1	4	0	2	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCG.......................................................................................................................................................................................	22	1	150.00	150	2	123	1	0	5	14	3	2	0	0
.....................................................................................................................................................................CAATACAACTGCAATGCAAG.............................................................................................................................	20	1	133.00	133	0	107	2	5	4	5	10	0	0	0
........................................................................................................GGTGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	22	1	123.00	123	4	110	1	5	1	2	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTCC.......................................................................................................................................................................................	21	1	115.00	115	0	115	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGA.........................................................................................................................................................................................	20	1	105.00	105	1	97	0	1	3	2	0	0	0	1
..........................................................................................................TGCATTGTAGTCGCATTGTA........................................................................................................................................................................................	20	1	93.00	93	0	93	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCAAA.....................................................................................................................................................................................	24	1	86.00	86	0	78	2	0	0	0	0	6	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGC.........................................................................................................................................................................................	20	1	86.00	86	4	9	5	53	0	11	4	0	0	0
...........................................................................................................GCATTGTAGTCGCATTGT.........................................................................................................................................................................................	18	1	82.00	82	0	82	0	0	0	0	0	0	0	0
......................................................................................................................................................................AATACAACTGCAATGCAAGC............................................................................................................................	20	1	73.00	73	0	65	2	6	0	0	0	0	0	0
............................................................................................................CATTGTAGTCGCATTGTC........................................................................................................................................................................................	18	1	73.00	73	6	59	0	6	0	0	2	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCCC......................................................................................................................................................................................	23	1	62.00	62	0	16	0	28	0	3	1	0	14	0
.........................................................................................................GTGCATTGTAGTCGCATTGTAAA......................................................................................................................................................................................	23	2	51.50	103	0	81	0	1	1	3	2	15	0	0
.....................................................................................................................................................................CAATACAACTGCAATGCAAGCTT..........................................................................................................................	23	1	47.00	47	0	30	1	3	1	5	7	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTCAA......................................................................................................................................................................................	22	1	46.00	46	0	46	0	0	0	0	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTT........................................................................................................................................................................................	20	2	44.00	88	0	88	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTG........................................................................................................................................................................................	21	1	35.00	35	0	22	1	5	0	7	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTCTG......................................................................................................................................................................................	22	1	32.00	32	0	32	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGG.........................................................................................................................................................................................	20	1	30.00	30	2	26	0	1	0	1	0	0	0	0
...........................................................................................................GCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	20	1	27.00	27	0	27	0	0	0	0	0	0	0	0
.......................................................................................................................................................................ATACAACTGCAATGCAAGCT...........................................................................................................................	20	1	27.00	27	0	25	0	1	0	1	0	0	0	0
...............................................................................................................................GTCCA--T---C----------T--T--G-ATTTCAGG.................................................................................................................................................	18	1	26.00	26	0	25	0	0	1	0	0	0	0	0
...........................................................................................................GCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	20	1	25.00	25	0	25	0	0	0	0	0	0	0	0
........................................................................................................GGTGCATTGTAGTCGCATTGT.........................................................................................................................................................................................	21	1	21.00	21	0	20	0	0	0	1	0	0	0	0
.....................................................................................................................................................................CAATACAACTGCAATGCAAGCA...........................................................................................................................	22	1	20.00	20	0	15	2	1	1	0	1	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTT..........................................................................................................................................................................................	18	1	19.00	19	0	19	0	0	0	0	0	0	0	0
....................................................................................................................................................................GCAATACAACTGCAATGCAAGC............................................................................................................................	22	1	18.00	18	0	16	2	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCCT......................................................................................................................................................................................	23	1	17.00	17	0	10	0	5	0	1	0	0	1	0
.....................................................................................................................................................................CAATACAACTGCAATGCAA..............................................................................................................................	19	1	16.00	16	0	9	0	0	0	6	1	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCGAG.....................................................................................................................................................................................	24	1	15.00	15	0	0	0	0	0	0	0	15	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTGT.....................................................................................................................................................................................	24	1	15.00	15	0	12	0	0	1	0	1	0	1	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTA......................................................................................................................................................................................	23	1	13.00	13	0	10	0	0	0	0	0	3	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTCG.......................................................................................................................................................................................	21	1	12.00	12	0	12	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTTA.......................................................................................................................................................................................	22	1	11.00	11	0	11	0	0	0	0	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGA.........................................................................................................................................................................................	19	1	11.00	11	0	11	0	0	0	0	0	0	0	0
...........................................................................................................GCATTGTAGTCGCATTGTA........................................................................................................................................................................................	19	1	11.00	11	0	11	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCCA......................................................................................................................................................................................	23	1	10.00	10	0	7	0	0	3	0	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTCTT......................................................................................................................................................................................	22	1	9.00	9	0	9	0	0	0	0	0	0	0	0
.....................................................................................................................................................................CAATACAACTGCAATGCAAGCTA..........................................................................................................................	23	1	8.00	8	0	6	1	0	0	0	1	0	0	0
.....................................................................................................................................................................CAATACAACTGCAATGCAAGT............................................................................................................................	21	1	8.00	8	0	4	0	1	0	3	0	0	0	0
.......................................................................................................................................................................ATACAACTGCAATGCAAGC............................................................................................................................	19	1	7.00	7	0	6	0	1	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTTG.....................................................................................................................................................................................	24	1	7.00	7	0	7	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCAT......................................................................................................................................................................................	23	1	7.00	7	1	6	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTC......................................................................................................................................................................................	23	1	7.00	7	0	4	0	1	0	1	0	0	1	0
......................................................................................................................................................................AATACAACTGCAATGCAAG.............................................................................................................................	19	1	7.00	7	0	7	0	0	0	0	0	0	0	0
...................................................................................................................................................................GGCAATACAACTGCAATGCAAG.............................................................................................................................	22	1	7.00	7	0	7	0	0	0	0	0	0	0	0
........................................................................................................GGTGCATTGTAGTCGCATTG..........................................................................................................................................................................................	20	1	7.00	7	0	7	0	0	0	0	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTAA.......................................................................................................................................................................................	21	1	7.00	7	0	7	0	0	0	0	0	0	0	0
...........................................................................................................GCATTGTAGTCGCATTGTCC.......................................................................................................................................................................................	20	1	6.00	6	0	6	0	0	0	0	0	0	0	0
....................................................................................CTC-CCGGAGATGACACGCAG.............................................................................................................................................................................................................	20	1	6.00	6	0	1	0	1	0	1	3	0	0	0
.............................................................................................................ATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	18	1	6.00	6	0	6	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCAC......................................................................................................................................................................................	23	1	6.00	6	0	6	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTC..........................................................................................................................................................................................	19	1	6.00	6	0	3	0	2	0	1	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCCCC.....................................................................................................................................................................................	24	1	6.00	6	0	1	0	4	0	0	0	0	1	0
.........................................................................................................GTGCATTGTAGTCGCATTTC.........................................................................................................................................................................................	20	1	6.00	6	0	6	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTGTCC...................................................................................................................................................................................	26	1	5.00	5	0	3	2	0	0	0	0	0	0	0
.............................................................................................................ATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	18	1	5.00	5	1	4	0	0	0	0	0	0	0	0
......................................................................................................................................................................AATACAACTGCAATGCAAGCC...........................................................................................................................	21	1	5.00	5	0	1	1	3	0	0	0	0	0	0
.........................................................................................................................................................................ACAACTGCAATGCAAGCT...........................................................................................................................	18	1	5.00	5	0	3	0	2	0	0	0	0	0	0
............................................................................................................CATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	19	1	5.00	5	2	3	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGAA........................................................................................................................................................................................	21	2	4.50	9	0	8	0	0	0	1	0	0	0	0

droPer2

GT--------GTAACAATCTGCATT----------------------TGATCAAAAAACCAAA---CCAAACA-----------CTC-CCGGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTCCA--T---C----------T--T--G-ATTTCAGGCAATACAACTGCAGTGCAAGCTCTGTGCATTTCATAAATCAACGCCGTCC----AATGTCGCTGGTCCAGTTTCAG-----------------------------------------TCC-------------CTGCCCCGGT--	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
.........................................................................................................GTGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	21	1	62345.00	62345	12410	26126	371	4901	11689	6848
.........................................................................................................GTGCATTGTAGTCGCATTGT.........................................................................................................................................................................................	20	1	16285.00	16285	82	5532	77	1311	5146	4137
.........................................................................................................GTGCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	22	1	2572.00	2572	66	2015	138	73	177	103
.........................................................................................................GTGCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	22	1	2464.00	2464	66	1483	12	109	425	369
.........................................................................................................GTGCATTGTAGTCGCATTG..........................................................................................................................................................................................	19	1	2199.00	2199	35	1735	18	68	197	146
..........................................................................................................TGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	20	1	1951.00	1951	17	1919	0	5	5	5
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCT...........................................................................................................................	22	1	626.00	626	12	304	30	81	126	73
.........................................................................................................GTGCATTGTAGTCGCATTGTT........................................................................................................................................................................................	21	1	435.00	435	4	139	0	31	133	128
..........................................................................................................TGCATTGTAGTCGCATTGT.........................................................................................................................................................................................	19	1	418.00	418	0	414	0	1	2	1
.........................................................................................................GTGCATTGTAGTCGCATTGTA........................................................................................................................................................................................	21	1	340.00	340	64	177	9	19	42	29
.........................................................................................................GTGCATTGTAGTCGCATTGTCAA......................................................................................................................................................................................	23	1	286.00	286	1	222	22	11	19	11
.........................................................................................................GTGCATTGTAGTCGCATTGTCC.......................................................................................................................................................................................	22	1	248.00	248	5	155	6	25	46	11
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGC............................................................................................................................	21	1	244.00	244	6	164	4	21	37	12
.........................................................................................................GTGCATTGTAGTCGCATT...........................................................................................................................................................................................	18	1	228.00	228	11	121	0	11	82	3
...........................................................................................................GCATTGTAGTCGCATTGTC........................................................................................................................................................................................	19	1	205.00	205	92	103	1	0	3	6
.........................................................................................................GTGCATTGTAGTCGCATTGTCTG......................................................................................................................................................................................	23	1	167.00	167	2	100	2	12	27	24
..........................................................................................................TGCATTGTAGTCGCATTG..........................................................................................................................................................................................	18	1	149.00	149	0	149	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	21	1	147.00	147	0	147	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTAA.......................................................................................................................................................................................	22	1	131.00	131	3	70	4	10	30	14
..........................................................................................................TGCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	21	1	110.00	110	0	110	0	0	0	0
..............................................................................................................................TGTCCA--T---C----------T--T--G-ATTTCAGG.................................................................................................................................................	19	1	94.00	94	3	61	25	2	3	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCG.......................................................................................................................................................................................	22	1	75.00	75	4	27	1	3	33	7
.........................................................................................................GTGCATTGTAGTCGCATTGTAAA......................................................................................................................................................................................	23	1	68.00	68	3	50	2	1	8	4
.........................................................................................................GTGCATTGTAGTCGCATTGC.........................................................................................................................................................................................	20	1	57.00	57	0	1	1	10	38	7
.........................................................................................................GTGCATTGTAGTCGCATTGA.........................................................................................................................................................................................	20	1	35.00	35	2	21	2	2	4	4
......................................................................................................................................................................AATACAACTGCAGTGCAAGCT...........................................................................................................................	21	1	35.00	35	0	33	0	0	2	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCAAA.....................................................................................................................................................................................	24	1	30.00	30	0	26	3	0	1	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAAG.............................................................................................................................	20	1	27.00	27	0	19	1	0	3	4
.........................................................................................................GTGCATTGTAGTCGCATTGG.........................................................................................................................................................................................	20	1	27.00	27	7	7	0	0	12	1
..........................................................................................................TGCATTGTAGTCGCATTGTCAA......................................................................................................................................................................................	22	1	24.00	24	0	23	0	0	1	0
...........................................................................................................GCATTGTAGTCGCATTGT.........................................................................................................................................................................................	18	1	24.00	24	1	23	0	0	0	0
........................................................................................................GGTGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	22	1	20.00	20	0	20	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTG........................................................................................................................................................................................	21	1	19.00	19	1	7	0	0	10	1
.........................................................................................................GTGCATTGTAGTCGCATTGTCTT......................................................................................................................................................................................	23	1	19.00	19	0	13	0	0	3	3
..........................................................................................................TGCATTGTAGTCGCATTGTA........................................................................................................................................................................................	20	1	17.00	17	0	17	0	0	0	0
...........................................................................................................GCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	20	1	16.00	16	0	16	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTCC.......................................................................................................................................................................................	21	1	14.00	14	0	14	0	0	0	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCTT..........................................................................................................................	23	1	13.00	13	0	8	0	2	3	0
............................................................................................................CATTGTAGTCGCATTGTC........................................................................................................................................................................................	18	1	13.00	13	2	10	0	0	1	0
.........................................................................................................GTGCATTGTAGTCGCATTT..........................................................................................................................................................................................	19	1	12.00	12	0	5	0	1	6	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAA..............................................................................................................................	19	1	12.00	12	0	8	0	0	4	0
..........................................................................................................TGCATTGTAGTCGCATTGTCTG......................................................................................................................................................................................	22	1	10.00	10	0	10	0	0	0	0
.............................................................................................................ATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	18	1	10.00	10	10	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGCT........................................................................................................................................................................................	21	1	9.00	9	0	0	0	4	5	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTGT.....................................................................................................................................................................................	24	1	9.00	9	0	1	0	0	1	7
......................................................................................................................................................................AATACAACTGCAGTGCAAGC............................................................................................................................	20	1	8.00	8	0	8	0	0	0	0
....................................................................................................................................................................GCAATACAACTGCAGTGCAAGC............................................................................................................................	22	1	8.00	8	0	7	1	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTC..........................................................................................................................................................................................	19	1	8.00	8	0	8	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTT........................................................................................................................................................................................	20	1	7.00	7	0	7	0	0	0	0
....................................................................................................................................................................GCAATACAACTGCAGTGCAAG.............................................................................................................................	21	1	7.00	7	0	6	0	0	1	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGA............................................................................................................................	21	1	7.00	7	3	2	1	0	1	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCGT......................................................................................................................................................................................	23	1	7.00	7	0	2	0	0	1	4
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCC...........................................................................................................................	22	1	6.00	6	1	2	0	0	2	1
.........................................................................................................GTGCATTGTAGTCGCATTGCA........................................................................................................................................................................................	21	1	4.00	4	0	0	0	1	3	0
.........................................................................................................GTGCATTGTAGTCGCATTGTAG.......................................................................................................................................................................................	22	1	4.00	4	0	1	0	0	2	1
...........................................................................................................GCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	20	1	4.00	4	0	4	0	0	0	0
...............................................................................................................................GTCCA--T---C----------T--T--G-ATTTCAGG.................................................................................................................................................	18	1	4.00	4	0	4	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTTC.........................................................................................................................................................................................	20	1	4.00	4	0	3	0	0	1	0
.........................................................................................................GTGCATTGTAGTCGCATTGAA........................................................................................................................................................................................	21	2	3.50	7	1	3	0	1	0	2

droAna3

TT--------CTGCTGATTAGCGTA---C--------------AGTGAGGTGGCCGAATACCA---GCAGACACTATACACCCGCCC-TCGGAGATGTCACGCAGGTGCATTGTAGTCGCATTGTCTGTCCC--A---C----------T--T--G-C-TCCAGGCAATACAACTGCAGTGCAAGCTCTGTGCATTTCACAAA-CAACGCCAACTTTCA-CTGACACTGG------------------CA-TACGGTGCCGGAA----------------------------CTG------------T--	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.........................................................................................................GTGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	21	1	35702.00	35702	17514	1231	113	3577	1678	11589
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCT...........................................................................................................................	22	1	19478.00	19478	5974	132	18	260	1292	11802
.........................................................................................................GTGCATTGTAGTCGCATTGT.........................................................................................................................................................................................	20	1	15641.00	15641	3382	145	98	2601	2906	6509
.........................................................................................................GTGCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	22	1	4114.00	4114	1645	135	17	262	166	1889
.........................................................................................................GTGCATTGTAGTCGCATTG..........................................................................................................................................................................................	19	1	3280.00	3280	2153	6	28	236	119	738
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGC............................................................................................................................	21	1	2754.00	2754	1221	174	11	161	102	1085
.........................................................................................................GTGCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	22	1	1662.00	1662	674	181	506	24	12	265
..........................................................................................................TGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	20	1	1383.00	1383	1377	1	0	0	1	4
.........................................................................................................GTGCATTGTAGTCGCATTGTT........................................................................................................................................................................................	21	1	889.00	889	272	1	1	123	101	391
......................................................................................................................................................................AATACAACTGCAGTGCAAGCT...........................................................................................................................	21	1	570.00	570	447	0	0	2	10	111
.....................................................................................................................................................................CAATACAACTGCAGTGCAAG.............................................................................................................................	20	1	452.00	452	256	4	1	3	18	170
.........................................................................................................GTGCATTGTAGTCGCATTGTA........................................................................................................................................................................................	21	1	394.00	394	96	64	27	16	26	165
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCTT..........................................................................................................................	23	1	359.00	359	93	2	0	11	38	215
..........................................................................................................TGCATTGTAGTCGCATTGT.........................................................................................................................................................................................	19	1	251.00	251	251	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCAA......................................................................................................................................................................................	23	1	245.00	245	43	75	115	0	0	12
..........................................................................................................TGCATTGTAGTCGCATTG..........................................................................................................................................................................................	18	1	189.00	189	189	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATT...........................................................................................................................................................................................	18	1	137.00	137	65	2	1	32	6	31
..........................................................................................................TGCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	21	1	127.00	127	127	0	0	0	0	0
......................................................................................................................................................................AATACAACTGCAGTGCAAGC............................................................................................................................	20	1	102.00	102	90	1	0	1	1	9
.........................................................................................................GTGCATTGTAGTCGCATTGTCTG......................................................................................................................................................................................	23	1	97.00	97	92	0	0	1	1	3
...........................................................................................................GCATTGTAGTCGCATTGTC........................................................................................................................................................................................	19	1	89.00	89	82	2	0	1	1	3
.........................................................................................................GTGCATTGTAGTCGCATTGTCC.......................................................................................................................................................................................	22	1	77.00	77	15	49	3	2	0	8
.........................................................................................................GTGCATTGTAGTCGCATTGTCTT......................................................................................................................................................................................	23	1	73.00	73	49	1	0	1	1	21
.........................................................................................................GTGCATTGTAGTCGCATTGTCG.......................................................................................................................................................................................	22	1	72.00	72	24	4	7	11	9	17
.........................................................................................................GTGCATTGTAGTCGCATTGA.........................................................................................................................................................................................	20	1	70.00	70	46	2	2	3	2	15
.........................................................................................................GTGCATTGTAGTCGCATTGC.........................................................................................................................................................................................	20	1	66.00	66	2	34	1	20	5	4
.......................................................................................................................................................................ATACAACTGCAGTGCAAGCT...........................................................................................................................	20	1	56.00	56	41	0	0	1	3	11
.........................................................................................................GTGCATTGTAGTCGCATTGTAA.......................................................................................................................................................................................	22	1	49.00	49	11	15	10	3	1	9
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCC...........................................................................................................................	22	1	45.00	45	6	27	0	0	1	11
..........................................................................................................TGCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	21	1	44.00	44	42	0	0	0	0	2
.........................................................................................................GTGCATTGTAGTCGCATTGTG........................................................................................................................................................................................	21	1	43.00	43	7	1	1	5	8	21
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCG...........................................................................................................................	22	1	34.00	34	18	0	0	0	3	13
.........................................................................................................GTGCATTGTAGTCGCATTT..........................................................................................................................................................................................	19	1	32.00	32	12	0	2	4	5	9
.....................................................................................................................................................................CAATACAACTGCAGTGCAA..............................................................................................................................	19	1	31.00	31	18	1	0	3	1	8
.........................................................................................................GTGCATTGTAGTCGCATTGTCAAA.....................................................................................................................................................................................	24	1	29.00	29	8	18	3	0	0	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGT............................................................................................................................	21	1	29.00	29	2	0	0	0	4	23
......................................................................................................................................................................AATACAACTGCAGTGCAAG.............................................................................................................................	19	1	25.00	25	22	0	0	0	1	2
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCA...........................................................................................................................	22	1	20.00	20	17	0	0	0	1	2
...........................................................................................................GCATTGTAGTCGCATTGT.........................................................................................................................................................................................	18	1	18.00	18	17	0	0	0	1	0
.........................................................................................................GTGCATTGTAGTCGCATTGG.........................................................................................................................................................................................	20	1	16.00	16	8	0	0	7	1	0
............................................................................................................CATTGTAGTCGCATTGTC........................................................................................................................................................................................	18	1	16.00	16	15	1	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTAAA......................................................................................................................................................................................	23	2	14.50	29	7	10	9	1	1	1
..............................................................................................................................TGTCCC--A---C----------T--T--G-C-TCCAGG.................................................................................................................................................	18	1	14.00	14	2	6	4	0	0	2
.....................................................................................................................................................................CAATACAACTGCAGTGCA...............................................................................................................................	18	1	14.00	14	7	0	0	3	0	4
........................................................................................................GGTGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	22	1	13.00	13	13	0	0	0	0	0
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCTA..........................................................................................................................	23	1	13.00	13	7	0	1	0	1	4
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGA............................................................................................................................	21	1	13.00	13	4	0	0	2	1	6
........................................................................................................................................................................TACAACTGCAGTGCAAGCT...........................................................................................................................	19	1	13.00	13	11	0	0	0	0	2
..........................................................................................................TGCATTGTAGTCGCATTGTA........................................................................................................................................................................................	20	1	13.00	13	13	0	0	0	0	0
.......................................................................................................................................................................ATACAACTGCAGTGCAAGC............................................................................................................................	19	1	12.00	12	12	0	0	0	0	0
.........................................................................................................................................................................ACAACTGCAGTGCAAGCT...........................................................................................................................	18	1	11.00	11	7	3	0	0	1	0
..........................................................................................................TGCATTGTAGTCGCATTGTT........................................................................................................................................................................................	20	2	11.00	22	21	0	0	0	0	1
.........................................................................................................GTGCATTGTAGTCGCATTGTCGT......................................................................................................................................................................................	23	1	10.00	10	0	0	0	0	3	7
....................................................................................................................................................................GCAATACAACTGCAGTGCAAGC............................................................................................................................	22	1	10.00	10	6	4	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTC..........................................................................................................................................................................................	19	1	9.00	9	6	0	0	0	0	3
...........................................................................................................GCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	20	1	9.00	9	9	0	0	0	0	0
......................................................................................................................................................................AATACAACTGCAGTGCAAGCTT..........................................................................................................................	22	1	9.00	9	7	0	0	0	0	2
.....................................................................................................................................................................CAATACAACTGCAGTGCAAGCTC..........................................................................................................................	23	1	8.00	8	3	0	0	1	0	4
.....................................................................................................................................................................CAATACAACTGCAGTGCAT..............................................................................................................................	19	1	8.00	8	2	0	0	2	0	4
..........................................................................................................TGCATTGTAGTCGCATTGTCTG......................................................................................................................................................................................	22	1	8.00	8	8	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGAA........................................................................................................................................................................................	21	1	8.00	8	1	0	0	1	2	4
.........................................................................................................GTGCATTGTAGTCGCATTGTCTC......................................................................................................................................................................................	23	1	6.00	6	1	1	0	1	0	3
.........................................................................................................GTGCATTGTAGTCGCATTGTCCA......................................................................................................................................................................................	23	1	6.00	6	0	1	5	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTGT.....................................................................................................................................................................................	24	1	6.00	6	4	1	0	0	1	0
.........................................................................................................GTGCATTGTAGTCGCATTGCA........................................................................................................................................................................................	21	1	6.00	6	0	2	1	1	1	1
..........................................................................................................TGCATTGTAGTCGCATTGA.........................................................................................................................................................................................	19	1	5.00	5	5	0	0	0	0	0

droBip1

TT--------TGAAGATTT----TTTGAT--------------AGTGAGGTGACCGAATACCA---GCAGACACTATTCACCCGCCT-TCGGAGATGTCACGCAGGTGCATTGTAGTCGCATTGTCTGTCCC--G---C----------T--T--G-C-TCCAGGCAATACAACTGCAGTGCAAGCTCTGTGCATTTCACAAA-CAACGCCACCTGTCA-------CTGG------------------CA-TAAGGTGCCGGAA----------------------------CTC----------T--CC	Size	Hit Count	Total Norm	Total
No Reads

droKik1

CA--------CGGCAGA---------------------------GTGAGTT----GAGTGACACCCACAGAA--CG--------CCT-CCGGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTTTCCCAATAT----------A--T--C-C-TCCAGGCAATACAACTGCAGTGCAAGCTCTGTGCATTTCACAAG-CAACAATGCT------------C--TTTCCTTTTTAGTTTTTGGGA-AACCGT------------------------------GTATG-------------C--CT	Size	Hit Count	Total Norm	Total
No Reads

droFic1

GTCTGCATCCTGACAAAT----TCA----------------------TGGTGACCGAATGCCA---GAGGACTCTT--------CCA-ACGGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTCCC--A---A----------T--T--G-C-TTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACAAA-CAACGTCAATTGTCG-------CTGG--------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droEle1

GACTGCACCCTAATACACCAGCCAG----------------------TGGTGACCGGATGCCA---GCAGACTCTT--------CCT-CCAGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTCCC--A---C----------T--T--G-C-CTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACAAA-CATCGTCGACCGTCG-------CTGG--------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droRho1

CC--------CGATCAACCAGCCAA----------------------TGGTGACCGAATGCCA---GCAGACTACT--------CCT-TCAGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTCCC--A---C----------T--T--G-C-TTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTTACAAG-CAACGCCGACTGTCT-------CTGG------------------CA-AAAGTCGCCAGTAAATAAAACCCATGATCATTTTGTCCAT-T------------T--CC	Size	Hit Count	Total Norm	Total
No Reads

droBia1

CC--------CGATCAGTTAGCCAA----------------------TGGTGACCGATTGCCA---GCAGACTCCT--------CAT-CCAGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTTCC--A---C----------T--T--G-C-CTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACAAA-CAACGCCGACTGTCT-------CTGG--------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droTak1

CC--------CGATCAGGCAGCCCA----------------------TGGTGACCGAATGCCA---GTTGACTCCT--------CATCCCAGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCCC--A---C----------T--C--G-C-TTCAGGCAATACAACTTCAGTGCAAGCTCCGAGCATTTCACAAA-CAACGCCGACAGTCG-------CTGG--------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droEug1

CT---------------------AT----------------------TGGTGACCGAATGCCA---GCAGGCTCTA--------TCT-CCAGAGATGACACGCAGGTGCATTGTAGTCGCATTGTCTGTTCC--A---C----------T--T--G-C-TTCAGGCAATACAACTTCAGTGCAAACTCTGTGCATTTCACAAA-CAACGCCGACGGCCT-------CTGG--------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

dm3

CC--------CGAACAATCAGTTTT----------------------TGGCGACTGAGTGCCA---CCAGACTCTT--------CCT-CTGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCCC--A---A----------T--T--G-C-TTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACATA-CAACGCCGAATGTCT-------CTGG--------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
.........................................................................................................GTGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	21	1	2654162.00	2654162	0	0	0	0	72	26	9	12	4	12	14	16	6	66	6	22	346	180	13	0	1630	2188	216	19	3	2053	8654	5022	2241	17234	6189	8487	428	379	2	1421	1425	3168	966	1821	610	4659	2716	2001	498	3475	1553	1263	2234	7876	3499	3916	836	1743	346	8	2335	1261	209	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	21088	23891	16398	22908	95	257	36	11	71	213	1160	1726	145	33	423	139	41	158	1199	387	632	39	9	220	630	2127	90	3541	2184	4212	4765	714	855	80	83	64	22	436	323	295	4924	4918	52	2145	30	1426	812	3154	75	3650	658	7575	4013	627	469	777	712	773	672	1074	883	1392	1597	377	1492	2395	961	1024	2815	10262	5941	7474	6285	10696	3797	3916	6353	4834	201	658	612	2514	698	5173	529	1997	1671	726	903	15677	11294	0	8268	11663	5840	6843	9742	19046	6702	2559	16940	39197	13139	7294	2830	1349	429	4111	361	34153	7356	8509	3077	2398	863	29	6	4631	149	2447	1332	62	156	31	43	99	1241	3718	52	23	99	36	10	0	6169	3794	2743	10044	1934	2099	4930	31388	14381	46468	70214	32799	16240	16598	45276	32107	19396	15572	36445	19	33	0	0	932	999	214	4944	10959	9210	41324	19633	19697	6461	12824	16259	4279	12568	9937	4309	5542	7458	1232	28513	10879	24015	13427	16307	23673	32160	14612	58058	25874	75900	81017	33507	25622	9213	13971	97532	4124	26461	17231	115713	4666	32842	16567	21412	18687	4117	19289	15175	19344	17319	32284	1422	3223	2830	1961	12332	1350	10970	43478	4053	15587	4024	6420	2112	3647	41780	26351	9139	15216	18493	45108	9432	12625	7094	2120	7661	11982	7682	5361	8389	771	3430	9551	3541	1281	5761	3338	3574	5498	11779	51013	39930	28201	107
.........................................................................................................GTGCATTGTAGTCGCATTGT.........................................................................................................................................................................................	20	1	695613.00	695613	0	0	0	0	27	2	5	5	1	2	0	1	1	23	0	1	1	3	0	0	270	583	65	8	0	337	5815	110	92	627	2344	1866	20	26	664	274	191	638	173	316	107	880	381	385	117	607	261	235	431	1337	436	626	136	414	0	4	3017	1951	414	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6556	7287	5206	7202	32	152	12	34	39	86	393	581	32	12	125	27	9	26	197	96	160	3	2	60	142	599	21	1495	964	2477	1979	178	312	22	10	30	2	199	122	43	1970	617	24	192	4	440	81	252	6	1861	192	2604	2673	47	31	22	38	16	1	14	43	147	58	322	888	1463	443	557	689	1349	1199	880	1287	2281	593	663	1035	725	14	38	52	35	23	1729	222	669	1099	342	352	4353	12183	0	2837	273	149	2762	2407	783	2747	120	6484	4048	6935	753	418	226	259	2521	148	13449	2391	1991	735	507	62	1	0	1514	2	791	341	2	1	0	3	0	98	502	23	3	40	15	11	8	3213	1845	1218	1963	493	827	1526	1777	2451	3592	7036	1709	2371	922	6371	3110	588	359	5314	2	3	0	0	177	188	79	942	3275	3294	6401	4210	2925	2424	4535	2947	1258	5762	5368	1251	1355	2246	451	12708	2770	5902	3180	4444	9651	8876	7587	27902	5286	20310	20534	10588	12175	3421	2982	19437	861	5110	3522	25202	820	5327	7516	7324	5647	1163	7680	6879	6775	7033	12330	993	419	795	523	5079	928	1868	7615	903	3606	2164	2582	1238	2214	3307	11323	1947	4314	6306	14503	2971	3727	2205	753	2688	4136	2842	1351	2444	306	1836	5071	2514	755	2080	1464	1667	1496	3563	17962	7270	10822	11
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGCT...........................................................................................................................	22	1	138451.00	138451	0	0	0	0	4	4	0	1	0	1	1	1	0	3	8	15	52	19	0	0	36	27	10	89	3	438	165	582	244	2392	162	454	32	48	0	42	81	93	49	93	56	96	138	90	66	80	91	88	105	210	76	110	42	0	0	25	11	1	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	448	504	346	504	10	25	5	0	14	21	119	193	10	4	50	22	4	4	23	38	80	2	2	32	81	118	12	208	271	445	521	126	195	15	12	10	7	32	46	5	130	61	5	60	1	15	9	25	1	35	9	113	34	4	6	2	0	0	2	5	0	11	8	33	107	154	70	36	90	253	233	174	193	475	159	172	168	220	1	2	1	10	6	2496	338	1378	179	360	532	1077	1779	0	906	1200	632	29	527	2593	176	269	513	3261	86	99	4208	1550	294	52	48	96	164	251	57	54	113	0	0	122	1	67	17	0	3	0	0	0	51	149	0	0	2	2	0	0	916	762	558	216	308	93	64	527	177	1861	1552	533	170	267	1102	289	1220	1148	318	1	0	0	0	53	63	147	134	139	709	2274	374	435	84	205	584	158	301	430	410	311	428	29	1023	680	877	1046	2806	792	624	318	1063	3821	4928	1858	933	611	322	254	1194	249	1019	322	1818	117	528	735	664	933	470	1490	551	585	837	1012	8	65	45	33	749	49	169	443	64	153	59	467	48	40	3464	570	186	98	283	6321	1171	1009	540	383	1222	2210	692	426	984	164	444	1035	527	227	399	347	326	2634	2807	3311	4440	6183	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCATC.....................................................................................................................................................................................	24	1	90524.00	90524	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	47097	43423	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	22	1	67206.00	67206	0	0	0	0	0	1	0	1	1	0	1	0	0	4	0	0	3	3	1	0	21	35	1	0	0	9	243	8	20	56	342	251	1	1	0	29	22	59	20	25	12	43	29	29	9	72	20	17	38	116	27	43	12	21	27	0	401	300	95	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	968	1137	779	1013	1	13	0	0	5	3	31	15	2	0	0	0	1	1	3	3	13	1	1	0	14	29	0	119	101	262	53	13	18	0	1	3	0	12	9	6	307	44	2	10	0	63	15	79	2	283	34	438	366	0	0	3	10	12	20	34	28	46	1	25	100	172	56	37	39	112	78	59	85	108	52	52	53	35	4	5	5	2	3	75	61	32	47	26	65	843	1221	0	607	18	9	593	305	60	378	24	1009	228	1302	81	24	20	9	95	6	2756	125	115	46	37	2	0	1	56	2	41	13	14	9	0	11	11	34	141	3	1	0	0	0	0	111	70	51	83	22	17	60	372	504	462	924	320	484	181	868	625	12	12	742	29	25	0	0	12	6	18	226	900	617	1095	526	875	312	915	697	180	330	367	99	128	127	41	767	232	451	248	236	357	694	477	1459	333	1723	1230	667	1085	332	161	1068	66	325	233	1489	49	446	478	623	514	81	392	804	767	798	1249	109	31	45	17	340	84	145	691	65	280	94	60	20	78	673	1002	436	163	254	937	177	165	147	44	119	283	113	148	171	16	168	531	206	70	221	104	175	176	604	2081	1064	1057	29
.........................................................................................................GTGCATTGTAGTCGCATTG..........................................................................................................................................................................................	19	1	51755.00	51755	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	10	40	7	4	0	25	133	48	26	153	412	337	9	7	15	15	12	54	13	18	12	86	29	24	30	31	7	9	16	94	36	19	3	0	0	0	758	428	102	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	354	393	286	398	2	17	4	1	0	7	17	34	0	1	7	3	0	3	14	13	17	0	1	1	12	33	0	53	40	134	153	23	26	1	5	2	0	17	9	1	38	44	0	5	0	16	18	14	0	85	11	90	109	19	13	30	21	0	0	0	2	7	29	126	153	268	11	55	53	54	127	27	97	247	35	23	23	21	1	3	1	2	1	47	16	50	29	30	10	235	908	0	100	107	60	123	387	170	466	31	257	160	197	35	4	4	10	201	45	613	225	94	107	18	7	0	0	110	0	99	49	3	0	0	0	1	8	26	0	0	5	1	0	0	66	38	40	114	28	79	179	79	292	234	401	103	143	32	413	521	123	83	630	85	74	0	0	14	12	6	192	604	400	711	605	246	485	1473	266	296	630	414	95	62	148	54	1235	205	281	86	283	612	639	619	3747	454	1203	1120	897	1221	334	132	733	37	205	112	796	17	141	233	462	206	152	613	813	635	1035	1591	126	31	61	28	235	76	44	194	19	86	72	45	53	115	711	438	68	106	222	518	53	63	34	35	112	74	38	17	81	6	94	339	170	39	110	69	83	38	200	2613	307	577	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	22	1	51346.00	51346	0	0	0	0	1	0	5	4	1	0	0	0	0	0	0	0	0	1	0	0	47	40	9	0	0	0	44	0	0	0	0	0	0	0	1	107	35	306	51	92	47	122	34	200	32	275	23	64	89	185	30	134	45	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	151	159	130	144	1	182	33	10	33	27	4	3	0	1	0	0	0	0	1	3	0	0	0	0	5	7	0	42	22	83	40	10	2	0	0	20	1	5	68	8	160	59	2	38	1	43	10	71	2	208	26	338	258	1	0	13	17	102	107	85	40	34	0	265	625	742	348	211	83	240	186	136	210	58	156	63	104	91	0	1	1	2	0	14	0	11	10	12	7	700	753	0	412	9	8	358	284	19	279	8	699	18	787	19	1	0	10	39	1	1608	15	181	20	113	1	5	4	11	17	17	179	1	1	0	0	2	108	370	0	1	4	1	0	0	41	26	9	189	47	61	17	747	671	689	839	690	658	513	2321	484	5	0	629	695	695	0	0	20	14	0	180	252	204	680	211	213	452	1040	613	289	201	513	62	45	185	47	224	47	103	191	50	123	299	410	275	55	342	853	144	262	80	292	2051	113	672	341	2556	64	510	60	174	148	58	69	201	200	216	447	715	80	15	8	81	50	255	1153	148	687	41	13	18	34	276	122	314	781	991	505	72	62	21	21	28	63	112	16	160	4	71	245	97	78	185	124	145	18	99	417	303	359	9
.........................................................................................................GTGCATTGTAGTCGCATTGTCTG......................................................................................................................................................................................	23	1	44958.00	44958	0	0	0	0	1	0	0	0	0	0	1	0	0	3	0	0	0	0	1	0	25	20	9	0	0	2	56	21	202	55	136	93	2	2	2	41	42	94	14	35	16	52	34	61	4	88	28	32	43	105	42	101	16	0	0	0	131	75	31	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	296	367	269	329	0	1	0	1	0	2	24	18	0	0	0	2	0	1	6	5	0	1	0	0	3	2	0	93	69	111	52	3	3	1	0	2	0	13	4	0	60	55	0	13	0	25	23	122	2	58	12	87	79	0	1	0	0	16	26	21	24	9	1	1	26	23	4	25	35	115	74	99	68	85	97	58	76	52	3	14	16	8	13	37	67	70	82	17	6	267	207	0	243	48	23	92	130	75	155	251	80	75	122	284	0	11	30	67	5	355	52	75	29	55	2	0	1	15	8	24	25	4	0	0	0	0	37	45	0	1	1	1	0	0	194	179	82	105	29	12	31	313	140	401	504	303	150	188	265	181	13	9	206	0	1	0	0	9	18	9	49	189	314	1941	920	1233	91	300	685	74	187	212	177	228	51	26	236	300	211	186	836	443	391	436	704	1093	2403	467	530	849	264	103	748	47	265	127	960	63	386	495	190	585	238	683	99	207	190	329	7	20	21	19	440	21	230	1035	87	361	37	287	33	126	1036	1182	699	315	452	520	266	172	195	165	185	553	58	262	176	29	61	177	42	34	125	77	83	231	388	433	617	518	6
.........................................................................................................GTGCATTGTAGTCGCATT...........................................................................................................................................................................................	18	1	14439.00	14439	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	3	0	0	30	46	0	0	0	10	8	10	59	42	9	14	9	11	0	2	5	7	1	1	2	1	0	8	6	3	3	3	5	6	1	5	1	0	0	0	13	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	129	131	81	159	4	5	0	10	0	6	25	32	2	0	3	1	0	3	23	10	14	0	0	2	9	90	2	28	36	59	93	9	28	0	3	0	1	7	3	1	22	4	0	2	0	4	1	1	0	18	156	23	16	2	3	1489	1613	0	0	0	0	22	19	10	8	20	0	6	8	37	29	20	28	44	5	0	0	2	0	0	4	44	16	22	18	16	65	0	0	21	255	0	25	14	10	10	14	42	10	60	40	44	43	37	0	8	1	1502	600	118	62	85	16	4	1	0	0	79	0	24	0	0	3	1	10	7	7	16	1	0	0	0	0	0	54	27	20	43	10	68	107	40	71	426	475	47	98	9	31	157	14	8	73	1	0	0	0	5	4	5	29	34	5	10	7	2	5	20	6	4	78	84	10	21	10	5	123	36	49	15	29	65	71	102	502	160	184	208	160	115	44	11	53	0	9	7	39	6	25	34	378	34	12	77	96	61	96	174	16	4	15	7	83	34	3	24	4	7	40	7	12	18	253	113	27	11	35	4	1	4	4	0	1	2	3	0	5	1	8	19	22	9	5	2	16	7	16	175	8	9	0
.........................................................................................................GTGCATTGTAGTCGCATTGTT........................................................................................................................................................................................	21	1	14207.00	14207	0	0	0	0	4	2	0	1	0	1	0	0	1	1	0	0	5	0	0	0	7	19	4	0	0	14	152	0	0	0	0	0	0	0	0	2	6	12	5	5	1	37	88	7	7	15	9	2	107	166	72	8	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	61	56	38	88	9	1	0	0	0	1	6	2	0	0	1	10	0	0	0	0	5	0	0	0	6	17	15	7	7	13	12	0	1	0	1	0	0	0	0	12	93	79	1	44	0	27	16	33	2	102	10	319	123	2	2	2	3	0	5	8	5	4	3	2	8	12	0	5	5	20	24	13	14	40	4	9	14	4	1	0	2	3	1	28	12	10	20	6	8	96	263	0	79	39	14	39	81	106	66	25	183	250	114	24	1	7	1	73	3	247	42	20	14	3	1	0	0	32	1	20	0	0	0	1	0	0	3	12	0	0	0	0	0	0	37	9	8	12	8	11	12	52	39	43	70	36	39	15	78	117	15	13	183	1	2	0	0	3	1	2	106	87	115	171	160	85	80	278	58	44	103	132	18	15	21	6	230	39	74	62	63	105	116	199	684	180	553	339	247	135	44	50	272	9	56	38	355	28	65	160	212	88	31	70	184	108	192	305	3	4	12	8	57	21	36	108	13	33	28	35	22	43	151	72	11	20	31	174	30	44	21	25	19	48	20	9	21	4	67	219	63	12	24	20	27	25	72	463	119	256	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGC............................................................................................................................	21	1	13982.00	13982	0	0	0	0	1	0	1	0	0	0	0	0	0	0	1	3	64	6	0	0	1	0	4	25	0	10	10	20	10	78	5	11	1	2	0	2	2	7	0	3	6	2	19	2	5	4	4	1	2	18	9	7	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	109	132	88	124	4	0	0	6	1	2	12	16	0	0	4	3	0	1	7	11	5	0	0	3	14	20	0	29	54	53	50	14	27	1	0	0	1	4	3	0	7	7	2	4	0	1	2	3	0	4	1	5	2	1	2	1	1	0	0	1	1	0	10	2	3	6	0	19	6	6	12	5	9	21	7	3	0	4	0	0	3	8	2	77	59	263	14	26	18	50	1111	0	23	44	25	7	13	85	7	12	44	203	19	14	93	54	32	7	9	18	8	5	0	5	0	0	0	7	0	2	0	1	0	0	0	1	0	0	0	0	0	0	0	0	78	71	72	13	16	5	1	32	26	75	56	48	21	17	79	332	1964	1880	339	1	0	0	0	0	1	3	8	18	211	474	84	66	4	61	80	12	45	85	45	57	21	2	55	45	53	48	208	51	23	30	81	297	539	80	70	177	77	4	38	14	57	14	57	9	18	32	12	35	29	99	13	17	11	38	1	1	4	2	104	4	5	26	1	2	3	16	3	0	431	21	28	2	6	143	40	9	24	16	25	115	10	13	20	2	3	29	8	6	4	2	5	41	115	72	108	104	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCAA......................................................................................................................................................................................	23	1	12037.00	12037	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	24	5	0	0	0	2	0	0	0	0	0	0	0	0	44	19	121	13	36	10	79	6	46	9	92	1	32	22	29	3	26	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	5	3	6	0	29	4	9	3	11	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	6	0	0	17	0	8	0	0	0	0	5	1	5	0	9	1	13	9	0	0	4	6	44	45	24	17	23	1	103	250	358	119	105	45	20	121	15	87	1	35	17	34	8	0	0	0	0	1	0	0	0	0	0	0	24	33	0	21	0	0	4	6	3	9	0	21	0	23	0	0	0	1	0	1	20	3	125	9	82	0	2	1	2	6	1	9	0	0	0	0	1	53	265	6	0	0	3	0	0	0	0	0	9	4	3	0	192	219	196	175	246	530	146	716	2	0	0	2	1	2	0	0	10	6	0	18	7	4	6	0	4	5	20	7	14	4	14	1	2	4	2	8	4	4	9	1	8	8	22	2	1	9	37	3	12	3	143	1012	45	306	191	1349	26	135	1	8	5	4	2	4	6	3	7	233	18	0	1	0	30	77	395	67	279	4	1	1	1	5	2	208	386	995	12	4	4	5	0	0	3	8	3	5	0	2	21	7	32	117	30	73	0	4	7	11	33	0
.........................................................................................................GTGCATTGTAGTCGCATTGTA........................................................................................................................................................................................	21	1	11604.00	11604	0	0	0	0	5	0	0	1	0	0	0	0	0	4	0	0	1	5	0	0	17	22	1	0	0	28	98	0	0	0	0	0	0	0	4	6	3	11	3	8	1	37	78	18	4	13	0	9	58	186	72	13	5	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	58	63	41	96	0	2	2	1	0	4	9	11	0	0	1	3	0	0	5	0	3	0	0	0	2	3	0	16	12	41	46	2	1	1	0	0	0	0	2	3	66	88	0	94	0	34	21	48	0	37	11	76	29	1	1	11	29	4	6	6	3	13	10	15	19	34	40	26	9	33	14	24	18	28	10	9	3	6	1	0	3	1	1	8	2	2	7	0	1	129	135	0	75	52	16	45	100	70	54	13	163	145	174	24	5	4	2	13	1	268	14	24	7	6	3	0	0	6	1	2	2	0	9	0	3	1	2	14	0	0	0	0	0	0	4	12	9	13	6	9	10	71	43	93	152	98	57	34	253	99	4	7	157	7	13	0	0	2	5	1	25	60	50	109	77	41	59	201	113	45	104	150	32	16	34	11	80	38	41	71	50	62	75	74	161	131	384	303	174	81	35	124	432	36	62	104	449	24	65	222	143	107	57	127	61	84	89	83	37	3	4	0	5	20	44	80	24	50	20	26	12	33	284	24	14	47	46	172	12	14	5	4	10	7	21	8	33	2	23	89	30	13	32	15	21	10	18	157	110	83	2
..............................................................................................................................TGTCCC--A---A----------T--T--G-C-TTCAGG.................................................................................................................................................	18	1	8645.00	8645	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	9	0	0	40	9	0	8	0	2	0	0	9	2	25	21	0	0	0	12	28	22	19	9	1	8	6	14	4	9	18	12	23	6	2	16	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	16	23	12	10	2	11	3	27	6	3	55	24	6	4	11	9	1	6	23	18	21	4	1	20	20	26	1	53	84	202	40	7	7	7	5	1	8	17	4	1	4	15	0	9	0	1	6	3	0	17	3	15	19	0	0	0	0	0	0	0	1	0	0	4	4	10	1	2	25	67	23	60	26	37	8	4	21	9	1	2	1	0	1	32	0	30	24	3	4	12	26	0	42	0	0	0	22	2	25	9	31	7	16	60	17	51	39	1	7	0	10	31	29	16	1	0	0	8	0	28	20	0	0	0	0	2	0	0	4	0	21	0	0	0	20	13	11	111	55	34	61	48	4	79	43	16	24	16	22	560	54	122	252	0	0	0	0	47	57	1	65	19	84	78	48	55	16	41	105	8	132	80	196	215	139	2	70	155	57	96	33	65	36	43	148	100	163	301	173	33	128	2	9	1	3	1	1	5	30	107	96	13	44	73	95	99	122	239	20	35	10	7	107	9	38	70	4	10	44	14	11	3	131	19	30	7	49	3	2	4	3	0	3	0	0	10	7	1	0	3	4	3	5	1	21	25	169	115	3	0	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAG.............................................................................................................................	20	1	5111.00	5111	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	2	51	5	0	0	0	2	1	8	1	8	11	23	9	64	14	45	3	2	4	2	0	1	0	0	1	1	6	1	5	3	0	0	2	3	0	0	0	0	0	0	7	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	15	9	13	0	0	0	0	0	0	1	1	1	0	1	0	1	0	0	1	0	0	0	0	0	0	0	1	8	19	4	1	4	0	0	0	0	1	0	0	22	7	2	1	0	1	1	9	0	0	0	22	0	0	0	1	0	0	0	0	0	0	0	0	1	1	0	0	1	3	1	2	3	9	1	6	4	6	0	0	3	47	1	55	10	108	26	10	6	39	109	0	7	91	37	1	52	75	15	10	3	15	2	2	74	39	3	23	27	6	2	2	5	1	10	0	0	2	0	2	9	0	0	0	0	0	1	1	0	0	0	0	0	0	31	45	37	5	1	1	3	4	4	7	6	9	4	1	7	53	24	25	30	0	0	0	0	0	0	1	5	4	54	225	34	21	5	36	78	15	32	22	9	16	21	3	36	19	33	20	115	19	21	9	38	163	173	45	39	22	18	4	22	9	35	5	42	1	9	14	6	15	66	27	18	7	23	27	4	4	1	0	131	3	4	6	1	2	2	7	2	1	470	22	4	3	3	108	102	18	5	68	13	119	17	3	35	15	8	45	6	4	4	10	7	20	97	106	142	98	0
.......................................................................................................................................................................ATACAACTTCAGTGCAAGCT...........................................................................................................................	20	1	4471.00	4471	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4409	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	1	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	1	1	1	0	0	0	0	1	8	0	1	0	3	0	0	0	3	1	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0
.........................................................................................................GTGCATTGTAGTCGCATTGG.........................................................................................................................................................................................	20	1	3669.00	3669	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	8	0	0	0	0	0	0	0	4	0	0	1	0	0	0	1	3	0	0	2	3	0	1	2	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	12	0	6	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	1	0	1	7	12	6	0	0	0	0	0	0	3	0	0	6	4	1	1	0	1	2	1	0	7	2	72	11	0	0	0	2	0	0	0	0	0	0	0	5	1	1	0	0	0	2	0	0	2	3	0	1	1	0	0	0	0	0	3	0	0	1	0	0	43	71	0	10	0	0	9	10	3	5	0	252	202	201	31	0	1	0	48	1	183	1	2	2	2	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	3	1	1	0	1	3	0	3	1	14	2	0	0	0	14	2	0	26	0	0	0	0	0	1	1	6	5	25	27	14	5	10	7	14	2	32	13	9	6	14	1	77	23	30	9	9	31	16	24	55	10	53	82	8	53	9	34	109	7	16	38	181	4	22	218	164	143	37	205	57	65	97	13	3	0	2	7	7	24	6	17	4	10	10	15	9	11	5	7	1	2	2	17	0	0	1	0	2	1	5	0	0	0	0	1	1	1	0	1	0	0	0	2	26	10	0
.........................................................................................................GTGCATTGTAGTCGCATTGC.........................................................................................................................................................................................	20	1	2570.00	2570	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	6	0	0	0	0	0	0	0	6	0	1	3	1	0	1	2	0	3	0	2	3	1	2	7	1	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	8	4	14	1	2	0	0	0	0	0	2	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	8	4	6	3	0	0	0	0	0	0	0	1	1	3	3	0	0	0	0	1	2	0	9	0	23	1	0	0	0	0	0	0	0	0	0	0	2	1	5	1	5	0	10	7	0	5	5	4	2	3	1	0	0	0	0	0	3	0	0	4	2	1	35	49	0	22	1	0	26	11	5	8	0	30	68	40	5	0	0	0	2	1	153	4	4	0	2	0	0	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	3	2	4	0	1	4	1	1	4	12	1	1	1	2	2	0	0	8	1	0	0	0	0	0	0	2	8	10	15	17	7	9	10	3	1	11	15	2	2	5	3	42	11	20	3	9	22	16	30	48	9	40	33	26	21	0	17	207	4	22	14	245	2	41	23	45	34	10	43	29	34	30	60	4	1	7	0	11	10	34	29	16	55	12	45	7	8	43	8	6	11	19	70	1	4	4	2	4	2	18	4	2	0	2	10	2	3	2	0	1	1	4	34	19	16	0
.........................................................................................................GTGCATTGTAGTCGCATTGTG........................................................................................................................................................................................	21	1	2568.00	2568	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	2	2	0	0	4	25	0	0	0	0	0	0	0	0	0	0	0	0	3	1	3	55	0	0	0	2	0	78	74	21	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	13	2	5	0	0	0	0	0	0	0	1	0	0	0	2	0	0	1	1	0	0	0	0	0	3	0	9	9	2	4	0	0	0	0	0	0	0	0	0	18	26	0	24	0	7	2	15	0	3	0	16	5	0	0	2	1	1	0	0	0	5	2	2	1	1	0	1	0	2	3	4	3	4	1	2	2	0	0	0	0	0	0	3	1	3	0	0	0	26	21	0	12	3	3	2	17	18	8	2	47	124	42	5	3	2	0	0	0	29	2	1	1	0	0	0	0	4	1	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	1	1	0	4	0	5	4	8	5	2	3	3	11	3	4	3	1	0	0	0	0	0	1	0	9	6	22	75	37	17	6	25	15	7	12	19	10	1	2	3	10	10	7	26	14	24	17	17	86	38	106	106	51	22	9	47	72	12	9	44	180	10	18	53	15	15	10	22	11	38	26	17	1	1	0	0	3	8	0	18	0	4	4	6	2	3	118	2	0	3	1	22	0	2	2	0	1	1	0	1	1	0	0	2	2	0	1	1	0	0	1	5	9	5	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCG.......................................................................................................................................................................................	22	1	2473.00	2473	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	1	0	0	0	14	0	0	0	0	0	0	0	0	5	2	6	2	8	1	10	5	2	2	9	0	5	2	3	4	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13	9	10	8	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	2	0	0	0	0	0	0	0	0	0	0	6	0	0	0	0	1	0	0	0	1	2	2	2	0	0	5	5	3	1	1	0	0	0	9	41	30	0	10	15	10	17	3	18	2	4	2	7	3	0	0	0	0	0	4	0	0	2	0	0	15	24	0	7	1	0	5	4	1	6	0	21	3	16	0	0	0	0	6	0	16	0	10	3	13	0	0	0	0	1	0	8	0	0	0	0	0	2	14	0	2	0	0	0	0	1	10	0	18	2	8	2	4	12	5	9	3	5	5	7	1	0	0	4	2	1	0	0	1	1	0	2	11	6	15	0	2	2	17	4	1	11	22	3	3	4	0	12	1	6	14	5	7	17	44	26	2	29	38	9	17	11	14	97	12	57	21	154	6	31	5	29	13	3	8	25	21	16	38	44	5	4	0	2	3	13	45	13	69	12	11	2	12	1	8	21	101	155	22	18	13	16	9	11	24	19	11	24	0	13	94	20	15	27	13	18	12	3	24	17	22	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCC.......................................................................................................................................................................................	22	1	2194.00	2194	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	0	0	0	4	0	0	0	0	0	0	0	0	3	1	2	0	1	0	6	5	5	1	4	1	2	15	9	5	0	1	0	43	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	26	25	18	22	0	0	0	3	0	1	3	0	0	0	0	0	0	0	1	1	0	0	0	0	2	0	0	3	0	6	12	0	0	0	0	1	0	0	1	3	50	6	1	3	0	3	3	1	0	27	5	36	27	0	1	15	28	0	2	1	0	6	0	7	21	41	2	1	4	7	16	1	10	2	1	1	0	7	0	0	0	0	0	3	0	0	0	0	0	30	28	0	13	0	1	10	3	5	5	0	13	14	16	9	0	0	3	0	0	57	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	4	3	0	0	0	0	0	0	2	0	0	12	4	0	0	35	25	20	37	42	28	14	26	3	0	2	5	26	27	0	0	0	0	0	5	31	23	67	25	14	11	35	14	4	13	12	2	6	5	0	28	9	19	5	9	18	12	12	32	15	39	27	12	27	6	4	53	6	9	10	101	2	18	7	8	11	3	10	9	7	8	10	6	0	4	0	6	2	18	18	18	16	0	8	1	0	30	4	6	10	12	22	5	1	2	1	4	3	3	2	2	0	1	2	2	0	6	1	3	1	4	22	12	19	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTGT.....................................................................................................................................................................................	24	1	1668.00	1668	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	3	1	4	4	0	0	1	2	1	1	2	0	0	0	1	1	0	2	0	1	2	1	0	3	0	0	0	0	32	14	9	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	27	34	19	20	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	6	4	8	7	0	0	0	0	0	0	2	0	0	2	6	0	4	0	0	1	1	0	6	2	2	3	0	0	0	0	0	0	1	0	0	0	0	1	3	6	2	4	4	2	1	2	5	0	0	0	5	0	2	0	0	0	0	0	2	0	0	0	13	11	0	13	0	0	4	6	1	6	3	7	1	7	11	0	0	3	1	0	12	0	1	1	1	0	0	0	0	0	2	0	0	0	0	0	0	0	2	0	0	0	0	0	0	4	5	1	2	3	2	1	10	8	15	23	8	13	7	9	12	0	1	8	1	0	0	0	1	0	0	1	10	8	30	14	33	1	13	20	1	9	4	5	4	1	2	12	13	2	6	16	6	6	6	15	17	46	9	12	32	8	5	31	2	11	2	35	5	12	24	9	20	1	4	3	11	7	11	1	0	0	1	17	2	9	27	5	15	5	11	5	5	19	68	25	5	28	12	21	11	18	3	8	21	3	27	7	3	10	28	2	2	4	9	8	25	16	22	31	49	0
..........................................................................................................TGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	20	1	1554.00	1554	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	1	0	0	21	8	5	0	0	0	0	0	0	1	3	2	0	0	0	1	0	0	0	0	0	0	1	7	0	1	0	30	28	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	15	7	6	0	1	0	0	0	0	2	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	3	3	6	4	0	0	0	0	0	0	1	0	1	0	1	0	0	0	1	0	0	0	0	0	3	2	0	0	0	1	0	0	1	2	0	1	0	0	1	0	0	1	6	0	6	1	8	0	0	5	0	0	0	0	4	0	71	0	70	6	23	31	5	4	0	5	15	8	9	17	41	22	6	1	9	4	6	52	25	1	25	3	23	7	6	1	0	4	0	0	6	2	1	3	0	0	0	0	0	2	3	0	0	0	0	0	0	4	8	2	6	2	1	2	5	3	10	10	5	3	2	10	9	13	10	2	0	0	0	0	0	1	1	1	2	1	2	1	2	0	6	1	1	1	0	0	2	0	0	6	0	6	2	5	4	4	4	6	4	10	6	4	4	1	33	209	4	19	12	72	7	21	4	2	2	0	5	4	9	5	13	0	0	1	1	1	0	5	18	0	1	1	2	0	2	15	12	1	1	3	13	3	6	4	1	5	8	4	4	6	1	7	13	9	0	8	4	3	2	2	12	7	13	4
.........................................................................................................GTGCATTGTAGTCGCATTGTAA.......................................................................................................................................................................................	22	2	1360.00	2720	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	9	0	0	0	0	4	0	0	0	0	0	0	0	4	6	2	17	3	8	0	15	1	8	2	19	1	4	7	9	3	5	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	9	6	4	0	11	0	0	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0	2	0	0	0	0	12	0	0	0	0	1	1	0	0	13	1	31	15	0	0	2	0	0	10	1	6	10	0	20	47	110	31	21	11	4	18	2	18	5	11	0	3	10	0	0	0	0	0	0	0	0	2	0	0	51	54	0	12	0	0	4	16	0	21	0	44	0	54	2	0	0	0	0	0	52	2	19	3	11	0	0	0	0	0	1	0	0	2	0	0	0	7	39	0	0	0	0	0	0	0	0	1	4	0	1	1	10	30	17	13	6	56	10	118	1	0	0	5	1	1	0	0	3	2	0	5	3	3	3	3	0	2	13	2	3	5	19	1	2	2	2	11	4	4	8	1	8	12	32	22	2	4	31	4	12	5	30	205	8	28	42	277	1	15	1	9	5	2	2	15	10	14	21	55	5	0	0	1	3	17	47	10	48	4	0	1	2	5	2	33	55	139	17	2	2	0	2	0	2	2	1	1	0	6	10	1	4	11	3	12	0	1	16	5	14	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCAT......................................................................................................................................................................................	23	1	1345.00	1345	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	2	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	2	1	2	0	0	0	1	0	0	0	0	0	0	0	1	4	0	0	0	0	3	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	5	0	2	0	0	0	1	0	0	0	5	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	11	0	6	2	4	4	18	1	0	0	0	620	586	0	0	0	0	0	0	1	0	1	0	0	1	3	0	0	0	1	0	1	1	0	1	0	0	1	0	1	0	2	0	0	0	0	1	0	1	0	1	0	2	1	2	0	2	2	0	1	0	0	1	0	3	1	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	1	1	0
......................................................................................................................................................................AATACAACTTCAGTGCAAGCT...........................................................................................................................	21	1	1296.00	1296	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	3	9	2	36	1	16	0	1	0	1	0	2	0	1	0	0	3	1	2	1	2	0	3	1	1	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	13	18	12	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	2	2	0	2	2	3	2	1	4	6	2	0	0	1	0	0	0	0	0	17	0	11	7	0	5	23	30	0	18	23	10	0	17	39	1	4	15	56	0	6	34	15	0	0	0	0	1	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	2	2	0	0	0	0	0	0	4	7	4	2	4	0	0	15	5	51	51	11	4	8	27	3	3	31	3	0	0	0	0	0	0	1	0	3	5	15	2	4	0	1	1	1	3	4	3	2	1	0	6	4	10	5	23	6	0	3	11	17	31	14	7	3	4	3	24	3	19	1	18	1	7	4	3	2	3	12	4	0	2	5	0	0	0	0	9	0	3	8	0	1	0	4	0	1	33	2	0	1	1	28	6	12	5	2	5	11	6	2	3	0	2	6	4	2	2	2	1	10	17	15	17	26	0
.........................................................................................................GTGCATTGTAGTCGCATTGA.........................................................................................................................................................................................	20	1	1253.00	1253	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	1	0	0	1	0	1	0	0	1	0	0	1	4	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	2	7	9	0	0	0	0	0	0	0	2	4	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	3	1	0	1	1	0	0	0	0	0	0	0	8	17	0	4	0	11	2	4	0	4	2	22	11	0	0	0	0	0	0	0	0	0	0	0	3	4	0	0	0	1	2	4	1	3	0	0	0	0	0	0	0	0	0	3	0	0	1	0	0	26	53	0	16	0	0	1	8	1	10	0	40	37	30	4	0	0	0	0	0	20	1	1	2	0	0	0	0	2	0	0	7	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	3	1	0	1	0	7	3	13	2	3	0	15	3	0	0	21	0	2	0	0	0	0	0	3	4	1	4	1	1	7	44	3	2	5	15	0	3	4	0	11	4	1	3	5	5	2	12	17	8	14	12	11	9	2	2	107	0	6	5	88	3	11	6	16	10	13	20	9	10	13	19	0	0	0	0	3	5	8	12	2	13	1	9	2	2	28	3	2	2	4	34	1	3	1	0	1	1	5	4	6	0	3	11	3	2	1	0	3	0	2	15	7	8	0
....................................................................................CCT-CTGGAGATGACACGAAG.............................................................................................................................................................................................................	20	1	1086.00	1086	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	1	0	0	1	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	4	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	9	7	11	5	1	2	0	0	0	0	3	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	1	2	0	1	0	1	1	1	3	3	0	0	0	0	0	3	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	19	24	20	3	2	1	2	1	0	0	0	0	1	0	1	6	0	0	6	0	0	0	0	1	0	1	1	0	0	2	3	5	1	1	1	0	10	5	12	10	6	0	13	13	7	19	7	7	10	3	8	3	10	15	6	7	3	0	0	0	0	0	0	0	1	23	4	59	1	37	1	0	1	2	2	2	0	2	43	0	3	10	3	14	3	10	2	4	1	0	10	12	3	10	50	55	57	3	44	33	42	47	22	6	0	6	1	0	0	0	0	21	7	14	45	8	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTT......................................................................................................................................................................................	23	1	1010.00	1010	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	3	0	1	0	1	3	0	0	0	3	1	0	1	0	1	3	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	11	6	4	10	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	4	3	0	1	0	1	0	2	0	13	0	17	15	0	0	3	0	0	0	0	2	0	0	0	2	0	0	0	1	3	4	0	2	4	0	0	0	1	0	0	2	0	2	2	2	2	2	0	0	7	54	0	8	1	3	1	2	3	4	2	8	5	8	1	0	0	1	4	0	5	4	0	1	1	0	0	0	1	0	1	0	0	0	0	0	0	2	4	0	0	0	0	0	0	6	1	1	0	0	0	0	1	3	3	5	2	6	2	3	8	0	0	4	0	0	0	0	0	0	0	7	9	10	46	37	47	3	36	8	3	2	3	5	26	13	1	35	1	35	6	7	6	2	10	27	19	40	15	28	65	3	0	3	0	1	0	7	0	3	6	2	6	0	9	1	2	1	3	0	0	0	0	0	1	2	6	0	0	1	2	0	1	17	5	1	0	1	1	0	0	1	0	1	2	1	0	2	0	4	7	1	0	0	1	2	1	1	10	5	7	0
...................................................................................................................................................................GGCAATACAACTTCAGTGCAAGC............................................................................................................................	23	1	956.00	956	0	0	0	0	0	1	0	0	0	0	1	0	0	2	0	0	0	4	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	2	0	1	1	2	0	1	38	9	1	1	1	1	0	1	2	3	5	0	0	1	5	23	0	176	108	194	96	13	14	1	1	0	0	10	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	2	0	0	0	7	0	1	0	0	0	0	1	0	3	1	0	0	2	1	0	0	1	0	0	0	0	3	2	0	0	0	0	0	3	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	1	0	0	0	0	1	0	0	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	5	25	4	2	0	2	0	0	3	4	8	2	1	1	0	6	1	0	5	5	1	1	0	6	22	0	2	5	1	0	0	0	1	0	2	0	0	1	0	2	1	4	2	0	0	2	0	0	0	0	8	2	3	1	0	0	0	5	0	0	9	0	0	2	0	0	3	0	0	0	0	4	0	0	0	0	0	0	0	1	0	1	0	1	6	1	7	3	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCAAA.....................................................................................................................................................................................	24	1	929.00	929	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	1	0	0	9	1	1	0	4	0	1	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	2	0	1	5	0	2	24	55	6	0	1	4	8	1	13	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	0	7	0	1	0	0	0	0	0	0	0	1	0	0	0	0	2	11	0	0	2	0	0	0	0	0	0	0	0	0	0	44	26	29	21	53	160	31	163	0	0	0	0	0	0	0	0	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	27	3	7	3	38	1	5	0	0	0	0	0	1	0	1	0	5	3	1	0	0	2	2	5	1	6	0	0	0	0	0	0	9	15	48	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	10	2	9	0	0	0	0	2	0
............................................................................................................CATTGTAGTCGCATTGTC........................................................................................................................................................................................	18	1	883.00	883	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0	1	1	0	9	2	4	0	1	0	0	0	1	0	0	0	0	0	0	0	2	1	0	3	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	8	7	8	1	0	0	0	0	1	1	1	0	0	0	1	0	0	2	0	0	0	0	0	2	2	0	0	2	3	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	4	0	0	0	0	0	2	0	0	1	0	0	3	14	5	7	7	8	3	0	0	0	0	0	0	1	1	40	18	19	8	9	22	0	3	0	6	4	1	4	4	11	2	0	1	7	1	0	0	24	0	8	1	10	8	12	0	1	0	0	0	5	0	0	4	0	0	0	0	0	0	0	2	0	0	0	0	0	22	19	9	2	3	6	3	1	0	3	3	0	0	1	2	1	3	5	2	0	0	0	0	2	0	1	0	0	0	2	2	0	0	0	1	0	1	0	1	0	0	0	7	0	3	1	1	3	5	1	10	3	11	11	8	2	3	16	59	2	12	4	16	2	6	2	16	7	1	6	6	10	10	13	1	0	2	1	5	3	2	8	1	6	1	0	1	1	15	21	0	3	0	2	8	8	5	1	4	8	4	8	4	1	3	10	1	2	3	3	1	1	2	2	7	2	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGCTT..........................................................................................................................	23	1	848.00	848	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	1	3	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	4	2	1	0	0	0	0	0	0	1	2	0	0	1	1	0	0	0	0	0	0	0	0	0	9	0	1	0	5	5	0	6	1	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	0	0	0	0	3	1	0	6	0	2	0	2	0	0	0	0	0	13	0	5	0	0	0	4	75	0	0	3	2	0	4	8	1	2	4	19	9	0	18	10	0	1	0	8	0	0	1	0	4	0	0	4	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	0	1	0	3	0	0	4	0	11	6	1	2	0	3	20	6	3	20	0	0	0	0	1	0	4	0	1	3	7	0	3	0	4	3	2	2	2	2	1	0	0	12	2	4	5	12	3	3	1	13	11	21	9	4	6	7	1	6	2	9	1	6	1	5	10	0	9	3	14	6	4	8	9	0	0	1	1	5	0	0	1	0	0	1	2	1	0	12	4	0	1	1	16	3	4	4	4	7	11	3	5	6	0	7	18	7	0	2	4	3	23	23	16	11	38	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGCTA..........................................................................................................................	23	1	828.00	828	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	1	2	0	1	0	0	0	0	0	0	0	0	0	1	0	8	1	1	2	1	1	6	1	6	0	4	1	2	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	2	0	2	0	7	0	0	1	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	7	18	30	3	7	6	6	11	3	9	0	1	0	0	9	0	0	0	0	0	4	0	0	1	5	0	4	5	0	1	0	0	0	0	4	0	1	1	2	3	0	0	1	0	2	0	0	1	6	1	2	0	0	0	0	1	0	0	0	0	0	0	0	1	11	0	0	0	0	0	0	2	2	0	0	0	1	0	6	2	16	21	7	2	6	18	4	1	0	1	3	0	0	0	0	2	0	1	0	0	1	0	4	0	2	0	1	0	0	3	1	0	0	1	1	1	0	5	2	0	1	2	4	4	4	2	4	0	10	67	19	79	14	113	5	15	4	1	2	1	0	0	1	2	1	2	1	0	0	1	1	5	17	0	4	0	0	0	0	8	1	3	2	12	6	1	3	3	0	0	4	0	1	0	0	0	2	1	0	3	4	2	2	8	3	13	9	0
.........................................................................................................GTGCATTGTAGTCGCATTT..........................................................................................................................................................................................	19	1	796.00	796	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	4	3	5	0	0	0	0	0	0	0	2	1	0	0	0	0	0	1	0	0	0	0	0	0	13	0	1	0	4	3	0	1	0	0	0	0	0	0	0	6	1	0	0	0	0	0	0	0	6	0	7	3	0	0	0	2	0	0	0	0	0	0	1	0	2	0	1	0	1	4	0	3	3	0	0	0	0	0	0	0	0	0	0	0	2	1	0	4	7	56	0	5	0	0	1	1	1	3	0	2	5	4	0	0	2	0	0	0	7	4	0	2	0	0	0	0	6	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	1	3	1	0	2	4	1	0	0	2	0	0	0	0	0	0	0	38	4	9	15	13	5	14	31	1	0	9	4	0	2	12	0	128	4	23	0	0	7	1	8	37	7	16	11	25	66	1	0	0	0	0	0	1	0	1	2	12	1	0	5	7	0	3	6	1	0	1	1	0	2	0	0	1	0	4	3	1	1	8	0	0	0	1	3	0	0	0	0	3	0	0	0	0	0	1	3	0	1	0	0	0	0	2	10	0	3	0
...................................................................................................................................................................GGCAATACAACTTCAGTGCAAG.............................................................................................................................	22	1	607.00	607	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	8	0	1	0	1	0	0	0	0	0	0	0	0	0	4	0	0	33	31	85	21	1	5	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	5	60	0	0	0	0	0	0	0	1	0	0	1	0	0	2	0	0	0	0	0	3	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	5	13	0	0	0	1	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	3	31	11	1	0	0	1	0	3	18	3	1	0	0	0	3	0	0	12	5	1	2	0	22	19	0	5	2	0	0	0	0	2	0	0	0	0	1	0	1	2	14	0	0	0	1	0	0	0	0	37	1	0	1	0	0	1	1	0	0	19	11	1	1	0	1	10	0	1	14	4	22	1	2	0	0	0	2	1	2	1	0	0	2	4	2	1	1	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCAC......................................................................................................................................................................................	23	1	587.00	587	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	3	1	0	0	1	0	1	5	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	0	0	0	2	3	1	0	0	0	0	0	0	5	2	2	1	2	0	1	0	2	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	2	1	0	2	1	1	0	0	1	0	246	237	0	0	0	0	0	0	1	1	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	13	0	2	2	14	0	1	0	0	0	0	0	1	0	0	0	2	0	0	0	0	0	2	1	1	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................GCATTGTAGTCGCATTGTC........................................................................................................................................................................................	19	1	569.00	569	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	3	0	0	0	0	2	1	1	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	1	1	0	2	0	1	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	2	3	7	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	4	3	3	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	2	1	1	0	0	0	0	0	3	0	0	0	0	0	0	0	2	2	1	2	1	0	0	8	3	0	0	0	3	1	17	0	5	2	5	0	6	3	0	1	11	1	3	10	18	5	1	2	4	2	2	3	7	0	6	1	19	3	9	1	2	2	0	0	5	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	4	0	1	2	3	5	1	0	1	1	5	0	0	0	1	0	0	0	3	0	0	0	0	7	2	0	1	1	3	1	2	1	0	0	2	0	1	1	0	0	4	0	1	0	5	1	3	1	4	2	6	3	4	4	4	3	1	10	74	0	8	3	27	1	6	1	12	2	0	1	3	2	0	3	0	3	0	1	0	0	0	2	1	2	2	0	1	0	32	7	1	3	1	5	2	1	0	0	1	0	0	0	0	0	1	0	0	0	5	0	0	0	1	9	4	2	0
....................................................................................................................................................................GCAATACAACTTCAGTGCAAGC............................................................................................................................	22	1	514.00	514	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	38	41	23	35	1	0	0	0	0	0	12	14	0	0	0	0	0	0	1	2	0	0	0	0	0	3	0	21	26	92	23	1	11	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	1	0	0	1	1	1	0	0	0	0	0	0	0	0	0	0	6	1	0	0	0	0	0	0	0	0	0	1	0	2	0	0	0	0	0	0	0	2	0	0	3	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	0	1	2	0	1	0	0	2	3	4	7	0	0	0	0	0	0	0	0	0	0	6	0	3	0	1	1	0	1	2	3	1	1	0	0	0	1	0	3	0	0	1	0	5	12	1	0	0	0	1	1	3	4	0	3	0	0	1	0	2	0	3	1	0	0	4	1	0	0	0	4	0	0	1	0	0	0	1	0	0	29	7	0	0	2	1	0	0	0	2	0	3	0	0	1	0	0	0	0	0	0	0	0	1	0	2	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTC......................................................................................................................................................................................	23	1	431.00	431	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	4	2	4	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	3	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	1	0	0	2	0	1	0	0	150	185	0	0	0	0	0	0	0	2	1	0	1	0	0	0	0	1	2	0	2	1	0	0	2	2	1	3	1	3	1	3	0	3	1	0	4	0	0	3	0	1	0	2	0	0	0	0	1	0	1	0	1	0	3	0	0	0	0	0	0	3	1	1	0	0	0	0	0	6	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0
..............................................................................................................................TGTCCC--A---A----------T--T--G-C-TTCAGGT................................................................................................................................................	19	1	400.00	400	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	3	1	0	1	0	0	1	1	0	0	2	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	2	3	2	0	0	0	0	1	0	0	0	0	1	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	4	1	2	0	0	0	3	6	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	1	0	0	2	0	1	1	11	1	6	0	91	0	5	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	4	1	1	0	12	11	3	4	8	7	8	18	5	26	15	0	0	0	0	0	0	1	0	0	1	0	0	2	0	1	2	1	1	1	0	0	3	2	0	1	0	0	0	1	1	1	0	0	0	1	4	3	0	0	0	3	0	2	1	3	0	0	3	2	3	6	2	4	0	3	2	0	0	1	0	2	0	1	0	3	2	0	1	0	0	1	0	0	0	1	0	0	1	0	0	1	0	0	0	1	0	1	0	0	0	1	2	1	2	5	10	3	3	0
.........................................................................................................GTGCATTGTAGTCGCATTGGA........................................................................................................................................................................................	21	1	391.00	391	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	3	0	0	0	3	0	1	0	5	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	5	1	0	0	0	0	0	1	0	0	0	13	27	19	6	0	0	0	0	0	3	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	3	2	2	0	0	0	2	0	2	1	0	0	0	0	2	3	1	3	1	2	3	1	3	6	16	11	3	0	1	15	21	1	0	12	28	3	2	36	16	18	10	27	5	6	7	0	0	0	0	0	0	0	1	1	1	2	3	2	1	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAA..............................................................................................................................	19	1	385.00	385	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	2	2	6	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	1	0	0	0	1	0	1	8	5	9	9	0	1	0	0	0	0	1	0	0	1	0	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	3	0	0	0	2	0	5	0	8	114	0	4	0	1	0	3	1	0	0	2	0	0	0	0	0	0	0	1	0	0	1	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	7	0	1	0	1	1	0	0	0	1	0	0	0	0	0	5	0	0	2	0	0	0	0	1	0	0	0	0	3	2	1	1	1	2	3	0	5	5	0	2	1	0	3	0	3	4	1	3	1	0	7	2	9	3	4	7	2	0	1	0	0	0	1	0	0	2	7	1	6	7	3	1	8	1	0	1	0	0	1	0	0	1	0	0	1	0	0	0	9	0	0	0	0	2	0	1	0	0	1	1	0	1	0	0	0	3	0	0	0	0	0	4	4	8	0	2	0
.........................................................................................................GTGCATTGTAGTCGCATTGTAAA......................................................................................................................................................................................	23	3	382.00	1146	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	1	1	0	0	0	0	0	0	0	0	0	0	0	0	2	1	7	3	4	1	13	1	0	0	4	0	0	4	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	2	3	0	0	0	0	3	0	0	0	0	0	8	23	45	11	10	2	0	11	2	15	0	1	1	0	0	1	0	0	0	0	2	0	0	0	0	0	3	3	0	2	0	0	0	1	0	3	0	2	0	4	0	0	0	0	0	0	3	1	4	1	8	0	0	0	0	0	0	0	0	0	0	0	0	14	34	0	0	0	0	0	0	0	0	0	1	0	0	0	8	24	11	7	11	58	4	91	0	0	0	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	1	0	1	1	7	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	2	0	3	0	17	93	0	17	21	153	1	7	0	1	0	0	0	4	1	1	1	25	1	0	0	1	4	4	29	0	34	2	0	0	0	1	0	21	36	127	1	0	0	0	0	0	0	0	0	0	0	0	0	2	3	8	2	7	0	0	2	0	5	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGCC...........................................................................................................................	22	1	342.00	342	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	2	0	0	0	1	1	1	0	0	0	4	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	0	0	0	0	0	0	0	0	1	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	1	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	0	1	0	8	2	1	0	11	6	0	4	1	1	0	1	4	0	1	2	27	0	0	5	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	5	0	0	1	0	0	0	2	1	0	1	0	0	0	5	4	1	0	0	0	0	0	0	1	0	2	0	9	1	4	0	1	1	1	0	1	1	1	2	0	2	0	3	1	6	2	1	0	1	6	6	6	2	1	1	1	1	0	2	0	5	0	0	4	7	5	7	10	1	1	3	3	0	0	0	0	5	0	3	2	2	0	1	5	0	0	17	0	1	0	0	10	1	3	1	0	1	1	0	0	2	0	0	1	0	0	0	0	0	5	6	10	9	6	0
.....................................................................................................................................................................CAATACAACTTCAGTGCA...............................................................................................................................	18	1	310.00	310	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	5	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	6	6	2	7	0	0	0	0	0	0	1	4	0	0	1	0	0	0	1	0	2	0	0	0	0	0	0	4	6	9	17	1	0	0	1	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	3	0	0	0	0	1	0	0	0	98	0	2	0	0	0	6	1	0	0	7	0	4	2	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	9	2	6	2	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	2	0	6	1	5	5	4	0	3	1	0	0	0	4	1	0	3	4	5	2	3	0	0	0	0	0	0	0	0	0	0	1	2	0	0	2	3	2	4	3	0	0	0	0	2	1	0	0	0	0	1	0	0	0	6	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	1	1	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGT............................................................................................................................	21	1	309.00	309	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	2	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	10	0	0	0	11	0	0	1	0	0	1	1	2	0	0	0	0	3	0	0	0	1	0	2	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	4	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	8	5	2	1	0	0	0	0	0	1	1	2	5	8	2	5	0	5	0	0	1	1	3	0	0	0	4	1	1	1	3	1	0	0	3	8	12	0	0	1	0	1	0	0	5	0	3	0	0	1	1	8	0	8	1	2	3	4	0	0	0	1	0	1	2	2	0	0	0	3	1	0	12	7	44	0	0	4	1	1	1	1	0	3	0	2	2	1	0	9	0	0	0	1	1	12	4	3	4	10	0

droSim2

CC--------CAAACAATCAGTCAT----------------------TGGCGACTGAGTGCCA---CCAGACTCCT--------CCT-CCGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCCC--A---A----------T--T--G-C-TTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACACA-CAACGCCGAATGTCT-------CTGG--------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
.........................................................................................................GTGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	21	1	773147.00	773147	475699	167971	48165	11902	8674	16797	4759	4236	2522	1772	12916	952	4877	11005	195	40	665
.........................................................................................................GTGCATTGTAGTCGCATTGT.........................................................................................................................................................................................	20	1	28084.00	28084	4422	1927	216	1671	267	610	1530	1234	1888	1185	4347	157	1937	6569	27	8	89
.........................................................................................................GTGCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	22	1	17934.00	17934	9362	4054	200	520	182	552	697	603	715	505	255	35	59	178	1	3	13
.........................................................................................................GTGCATTGTAGTCGCATTG..........................................................................................................................................................................................	19	1	16943.00	16943	3330	1613	124	637	3518	7010	45	38	40	31	428	20	11	72	4	1	21
.........................................................................................................GTGCATTGTAGTCGCATTGTCAA......................................................................................................................................................................................	23	1	16589.00	16589	8	3	19	135	0	0	1386	1298	7627	5628	179	74	223	9	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	22	1	13618.00	13618	2612	1160	670	743	0	0	912	845	2491	2017	807	411	739	202	3	0	6
.........................................................................................................GTGCATTGTAGTCGCATT...........................................................................................................................................................................................	18	1	9309.00	9309	333	168	12	24	1912	3782	36	32	20	35	2936	0	1	5	3	0	10
.........................................................................................................GTGCATTGTAGTCGCATTGTA........................................................................................................................................................................................	21	1	6643.00	6643	4058	1761	366	83	0	0	49	41	74	42	50	25	45	49	0	0	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGCTC..........................................................................................................................	23	1	3552.00	3552	0	0	0	0	1354	2198	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTT........................................................................................................................................................................................	21	1	2377.00	2377	1399	670	27	75	0	0	23	8	8	7	32	3	9	116	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTG......................................................................................................................................................................................	23	1	2054.00	2054	479	317	67	246	23	42	111	97	54	38	175	23	207	164	2	0	9
.....................................................................................................................................................................CAATACAACTTCAGTGCAA..............................................................................................................................	19	1	1836.00	1836	0	0	0	1	718	1116	0	0	0	0	1	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCC.......................................................................................................................................................................................	22	1	1812.00	1812	1298	412	37	18	0	0	9	12	9	7	4	3	0	3	0	0	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGCT...........................................................................................................................	22	1	1506.00	1506	201	71	27	351	132	241	55	45	20	40	142	29	14	138	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	20	1	1499.00	1499	390	92	39	955	3	8	4	1	4	0	3	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCAAA.....................................................................................................................................................................................	24	1	1168.00	1168	0	0	1	14	0	0	129	122	510	363	11	1	16	1	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTAA.......................................................................................................................................................................................	22	2	945.00	1890	41	18	16	13	0	0	123	93	857	577	57	6	76	13	0	0	0
.........................................................................................................GTGCATTGTAGTCGCA.............................................................................................................................................................................................	16	1	869.00	869	0	0	0	0	0	0	17	19	9	18	802	0	0	0	0	1	3
.....................................................................................................................................................................CAATACAACTTCAGTGCA...............................................................................................................................	18	1	850.00	850	0	0	0	1	338	510	0	1	0	0	0	0	0	0	0	0	0
..............................................................................................................................TGTCCC--A---A----------T--T--G-C-TTCAGG.................................................................................................................................................	18	1	841.00	841	1	1	5	5	2	0	495	229	40	12	13	38	0	0	0	0	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGC............................................................................................................................	21	1	817.00	817	53	7	0	39	275	409	6	5	1	2	5	6	2	7	0	0	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAG.............................................................................................................................	20	1	772.00	772	5	3	0	5	307	436	2	1	0	4	2	6	0	1	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCG.......................................................................................................................................................................................	22	1	624.00	624	303	192	42	5	0	0	6	9	17	12	24	5	7	2	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGG.........................................................................................................................................................................................	20	1	584.00	584	317	239	16	4	0	0	1	0	0	0	5	0	0	2	0	0	0
...........................................................................................................GCATTGTAGTCGCATTGTC........................................................................................................................................................................................	19	1	542.00	542	151	89	102	58	6	9	1	1	2	1	121	1	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTAAA......................................................................................................................................................................................	23	3	447.33	1342	2	3	3	8	0	0	126	128	654	400	4	1	12	1	0	0	0
............................................................................................................CATTGTAGTCGCATTGTC........................................................................................................................................................................................	18	1	377.00	377	233	59	43	6	0	3	0	0	1	2	30	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGC.........................................................................................................................................................................................	20	1	337.00	337	234	70	9	1	0	0	0	0	1	1	18	1	1	1	0	0	0
.........................................................................................................GTGCATTGTAGTCGC..............................................................................................................................................................................................	15	1	336.00	336	0	0	0	0	0	0	1	0	1	2	332	0	0	0	0	0	0
.............................................................................................................ATTGTAGTCGCATTGTC........................................................................................................................................................................................	17	1	304.00	304	0	0	0	0	0	0	1	2	1	1	299	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCAT............................................................................................................................................................................................	17	1	214.00	214	0	0	0	0	0	0	0	5	1	3	199	0	0	2	1	0	3
.........................................................................................................GTGCATTGTAGTCGCATTGTG........................................................................................................................................................................................	21	1	213.00	213	78	41	5	60	0	0	4	2	0	0	8	0	4	11	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGT.........................................................................................................................................................................................	19	1	131.00	131	5	1	0	119	0	0	0	0	1	0	3	0	0	2	0	0	0
............................................................................................................CATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	19	1	100.00	100	70	27	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGA.........................................................................................................................................................................................	20	1	98.00	98	23	19	0	7	0	0	1	0	1	4	6	0	1	36	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTGT.....................................................................................................................................................................................	24	1	97.00	97	2	2	0	2	0	2	17	15	14	5	1	1	12	22	1	0	1
.........................................................................................................GTGCATTGTAGTCGCATTGTCTT......................................................................................................................................................................................	23	1	85.00	85	24	22	0	10	0	0	1	0	2	1	1	1	2	21	0	0	0
.............................................................................................................ATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	18	1	83.00	83	50	22	3	0	0	0	0	0	0	0	8	0	0	0	0	0	0
.............................................................................................................ATTGTAGTCGCATTGT.........................................................................................................................................................................................	16	1	75.00	75	0	0	0	0	0	0	0	0	1	0	74	0	0	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	21	1	74.00	74	27	6	1	39	0	0	0	0	0	0	1	0	0	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	21	1	70.00	70	2	1	0	64	0	0	0	0	1	1	1	0	0	0	0	0	0
..............................................................................................................TTGTAGTCGCATTGTCA.......................................................................................................................................................................................	17	3	61.00	183	0	0	0	0	0	0	0	0	12	31	140	0	0	0	0	0	0
.............................................................................................................ATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	18	2	57.00	114	2	0	3	0	0	0	1	0	2	6	100	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTAA.....................................................................................................................................................................................	24	1	54.00	54	0	0	0	0	0	0	3	3	20	27	0	0	1	0	0	0	0
..............................................................................................................TTGTAGTCGCATTGTC........................................................................................................................................................................................	16	2	53.00	106	0	0	0	0	0	0	2	0	0	2	102	0	0	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTG..........................................................................................................................................................................................	18	1	51.00	51	4	1	0	43	0	3	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTGA.....................................................................................................................................................................................	24	1	40.00	40	2	12	0	3	0	0	8	4	3	1	0	0	1	6	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTAAA....................................................................................................................................................................................	25	1	39.00	39	0	0	0	0	0	0	5	4	22	8	0	0	0	0	0	0	0
...........................................................................................................GCATTGTAGTCGCATTGT.........................................................................................................................................................................................	18	1	38.00	38	0	1	1	15	1	0	0	0	0	1	18	0	0	1	0	0	0
......................................................................................................................................................................AATACAACTTCAGTGCAAGCT...........................................................................................................................	21	1	33.00	33	0	0	0	26	1	0	0	0	0	1	4	0	0	1	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCCA......................................................................................................................................................................................	23	1	31.00	31	0	0	0	1	0	0	2	2	14	9	0	1	2	0	0	0	0
........................................................................................................GGTGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	22	1	31.00	31	9	2	1	9	0	2	0	0	0	0	6	0	2	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGAA........................................................................................................................................................................................	21	1	30.00	30	4	3	0	0	0	0	1	2	6	7	4	0	0	3	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTA......................................................................................................................................................................................	23	1	26.00	26	2	5	2	5	0	0	0	0	4	2	0	0	3	3	0	0	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGCTA..........................................................................................................................	23	1	25.00	25	0	0	0	5	0	0	0	0	1	4	5	1	2	7	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTCTG......................................................................................................................................................................................	22	1	24.00	24	2	1	0	18	0	0	2	0	0	0	1	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTTAA......................................................................................................................................................................................	23	1	22.00	22	1	1	0	0	0	0	1	0	3	12	1	3	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATA...........................................................................................................................................................................................	18	1	21.00	21	13	2	0	1	0	0	1	0	0	0	4	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATG...........................................................................................................................................................................................	18	1	20.00	20	13	2	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0
..............................................................................................................................TGTCCC--A---A----------T--T--G-C-TTCAGGA................................................................................................................................................	19	1	19.00	19	1	0	0	0	0	0	6	9	3	0	0	0	0	0	0	0	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGCC...........................................................................................................................	22	1	19.00	19	14	2	2	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTT..........................................................................................................................................................................................	19	1	19.00	19	1	0	0	5	0	0	0	0	0	0	0	0	0	13	0	0	0
...........................................................................................................GCATTGTAGTCGCATT...........................................................................................................................................................................................	16	1	18.00	18	0	0	0	0	0	0	0	0	0	0	18	0	0	0	0	0	0
...................................................................................................................................................................GGCAATACAACTTCAGTGCAA..............................................................................................................................	21	1	18.00	18	0	0	0	0	7	11	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGCTG..........................................................................................................................	23	1	18.00	18	12	2	3	1	0	0	0	0	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGCTT..........................................................................................................................	23	1	18.00	18	6	0	0	10	0	0	0	0	0	0	1	0	0	1	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATC...........................................................................................................................................................................................	18	1	18.00	18	14	1	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTA........................................................................................................................................................................................	20	1	18.00	18	4	1	1	11	0	0	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTA..........................................................................................................................................................................................	19	1	18.00	18	2	1	0	1	0	0	0	1	4	3	6	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCAT......................................................................................................................................................................................	23	1	17.00	17	1	1	0	0	0	0	2	1	9	0	0	0	0	3	0	0	0
...................................................................................................................................................................GGCAATACAACTTCAGTGCAAGC............................................................................................................................	23	1	15.00	15	4	0	0	3	2	3	0	0	0	0	1	2	0	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTCAA......................................................................................................................................................................................	22	1	15.00	15	0	0	0	13	0	0	0	0	1	1	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTAA.........................................................................................................................................................................................	20	1	15.00	15	0	0	0	0	0	0	1	0	1	3	1	0	0	9	0	0	0
...........................................................................................................GCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	20	1	13.00	13	8	2	0	1	1	0	0	0	0	0	1	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTGAA....................................................................................................................................................................................	25	1	13.00	13	2	0	0	0	0	0	2	2	2	1	0	0	0	4	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTGAA......................................................................................................................................................................................	23	1	12.00	12	0	0	0	1	0	0	2	5	2	2	0	0	0	0	0	0	0
............................................................................................................CATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	19	1	11.00	11	2	1	1	1	0	0	1	0	0	1	4	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTC..........................................................................................................................................................................................	19	1	11.00	11	1	0	0	3	0	0	0	0	0	0	2	0	1	4	0	0	0
.............................................................................................................ATTGTAGTCGCATTGTCC.......................................................................................................................................................................................	18	1	11.00	11	8	1	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTTA.......................................................................................................................................................................................	22	1	11.00	11	2	0	0	0	0	0	1	0	1	3	0	0	1	3	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCAC......................................................................................................................................................................................	23	1	10.00	10	0	0	1	0	0	0	0	0	7	2	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTGAAA...................................................................................................................................................................................	26	1	10.00	10	0	0	0	0	0	0	2	2	3	3	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTGTAAA--................................................................................................................................................................................	27	1	10.00	10	0	0	0	1	0	0	1	3	3	2	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTGTAA...................................................................................................................................................................................	26	1	10.00	10	0	0	0	0	0	0	3	2	4	1	0	0	0	0	0	0	0
...........................................................................................................GCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	20	1	10.00	10	0	0	0	2	0	0	1	0	1	1	5	0	0	0	0	0	0
....................................................................................................................................................................GCAATACAACTTCAGTGCAA..............................................................................................................................	20	1	8.00	8	0	0	0	0	3	5	0	0	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................GGCAATACAACTTCAGTG.................................................................................................................................	18	1	8.00	8	0	0	0	0	2	6	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTGTA....................................................................................................................................................................................	25	1	7.00	7	0	0	1	0	0	0	2	0	1	2	1	0	0	0	0	0	0
............................................................................................................CATTGTAGTCGCATTGT.........................................................................................................................................................................................	17	1	7.00	7	0	0	0	0	0	0	0	0	0	0	7	0	0	0	0	0	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGCTCT.........................................................................................................................	24	1	7.00	7	0	0	0	0	2	5	0	0	0	0	0	0	0	0	0	0	0
...........................................................................................................GCATTGTAGTCGCATTGTCAA......................................................................................................................................................................................	21	1	7.00	7	0	0	0	0	0	0	0	1	5	0	1	0	0	0	0	0	0
......................................................................................................................................................................AATACAACTTCAGTGCAAGCTC..........................................................................................................................	22	1	7.00	7	0	0	0	0	2	2	0	0	0	0	3	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGGA........................................................................................................................................................................................	21	1	7.00	7	4	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................ATTGTAGTCGCATTGTCTG......................................................................................................................................................................................	19	1	7.00	7	1	1	0	0	0	0	0	0	0	0	5	0	0	0	0	0	0

droSec2

CC--------CGAACAATCAGTCAT----------------------TGGCGACTGAGTGCCA---CCAGACTCTT--------CCT-CCGGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCCC--A---A----------T--T--G-C-TTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACACA-CAACGCCGAATGTCT-------CTGG------------------CA-AAAGTCGACA-AG----------------------------TTT------------T--	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
.........................................................................................................GTGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	21	1	84511.00	84511	54536	7643	2655	19677
.........................................................................................................GTGCATTGTAGTCGCATTGT.........................................................................................................................................................................................	20	1	20268.00	20268	9600	3668	294	6706
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGCT...........................................................................................................................	22	1	7084.00	7084	2675	1793	251	2365
..........................................................................................................TGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	20	1	4363.00	4363	4353	0	1	9
.........................................................................................................GTGCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	22	1	3863.00	3863	2403	363	17	1080
.........................................................................................................GTGCATTGTAGTCGCATTG..........................................................................................................................................................................................	19	1	3257.00	3257	2458	67	21	711
.........................................................................................................GTGCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	22	1	2192.00	2192	1701	109	43	339
.........................................................................................................GTGCATTGTAGTCGCATTGTCTG......................................................................................................................................................................................	23	1	1192.00	1192	708	124	42	318
.........................................................................................................GTGCATTGTAGTCGCATTGTT........................................................................................................................................................................................	21	1	755.00	755	274	131	8	342
..........................................................................................................TGCATTGTAGTCGCATTGT.........................................................................................................................................................................................	19	1	701.00	701	695	0	0	6
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGC............................................................................................................................	21	1	447.00	447	330	22	10	85
.........................................................................................................GTGCATTGTAGTCGCATTGTA........................................................................................................................................................................................	21	1	373.00	373	248	26	4	95
..............................................................................................................................TGTCCC--A---A----------T--T--G-C-TTCAGG.................................................................................................................................................	18	1	304.00	304	3	0	269	32
...........................................................................................................GCATTGTAGTCGCATTGTC........................................................................................................................................................................................	19	1	280.00	280	262	7	7	4
.........................................................................................................GTGCATTGTAGTCGCATT...........................................................................................................................................................................................	18	1	237.00	237	160	1	5	71
......................................................................................................................................................................AATACAACTTCAGTGCAAGCT...........................................................................................................................	21	1	228.00	228	199	13	2	14
..........................................................................................................TGCATTGTAGTCGCATTG..........................................................................................................................................................................................	18	1	211.00	211	211	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	21	1	210.00	210	209	0	0	1
.........................................................................................................GTGCATTGTAGTCGCATTGTG........................................................................................................................................................................................	21	1	210.00	210	207	1	0	2
.....................................................................................................................................................................CAATACAACTTCAGTGCAAG.............................................................................................................................	20	1	208.00	208	57	24	4	123
..........................................................................................................TGCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	21	1	138.00	138	137	0	0	1
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGCTT..........................................................................................................................	23	1	104.00	104	44	34	1	25
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGCTA..........................................................................................................................	23	1	96.00	96	45	21	1	29
.........................................................................................................GTGCATTGTAGTCGCATTGTCAA......................................................................................................................................................................................	23	1	92.00	92	57	1	22	12
.........................................................................................................GTGCATTGTAGTCGCATTGTCC.......................................................................................................................................................................................	22	1	77.00	77	56	0	2	19
.........................................................................................................GTGCATTGTAGTCGCATTGTCG.......................................................................................................................................................................................	22	1	75.00	75	34	8	3	30
..........................................................................................................TGCATTGTAGTCGCATTGTCTG......................................................................................................................................................................................	22	1	74.00	74	74	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGA.........................................................................................................................................................................................	20	1	61.00	61	44	3	0	14
.........................................................................................................GTGCATTGTAGTCGCATTGTCTT......................................................................................................................................................................................	23	1	56.00	56	41	6	0	9
.........................................................................................................GTGCATTGTAGTCGCATTC..........................................................................................................................................................................................	19	1	54.00	54	53	1	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTGT.....................................................................................................................................................................................	24	1	49.00	49	16	20	0	13
.........................................................................................................GTGCATTGTAGTCGCATTGG.........................................................................................................................................................................................	20	1	46.00	46	43	1	0	2
.........................................................................................................GTGCATTGTAGTCGCATTGTCTGA.....................................................................................................................................................................................	24	1	43.00	43	42	1	0	0
............................................................................................................CATTGTAGTCGCATTGTC........................................................................................................................................................................................	18	1	42.00	42	33	2	1	6
...........................................................................................................GCATTGTAGTCGCATTGT.........................................................................................................................................................................................	18	1	40.00	40	40	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGC.........................................................................................................................................................................................	20	1	39.00	39	13	7	1	18
......................................................................................................................................................................AATACAACTTCAGTGCAAGC............................................................................................................................	20	1	32.00	32	32	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTT..........................................................................................................................................................................................	19	1	31.00	31	30	1	0	0
........................................................................................................GGTGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	22	1	25.00	25	25	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTAA.......................................................................................................................................................................................	22	2	25.00	50	24	12	5	9
.........................................................................................................GTGCATTGTAGTCGCATTTC.........................................................................................................................................................................................	20	1	24.00	24	23	0	0	1
..........................................................................................................TGCATTGTAGTCGCATTGTA........................................................................................................................................................................................	20	1	18.00	18	18	0	0	0
.......................................................................................................................................................................ATACAACTTCAGTGCAAGCT...........................................................................................................................	20	1	18.00	18	14	4	0	0
....................................................................................................................................................................GCAATACAACTTCAGTGCAAGC............................................................................................................................	22	1	14.00	14	14	0	0	0
...........................................................................................................GCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	20	1	14.00	14	13	1	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTT........................................................................................................................................................................................	20	2	12.50	25	25	0	0	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGCA...........................................................................................................................	22	1	11.00	11	9	1	0	1
.........................................................................................................GTGCATTGTAGTCGCATTA..........................................................................................................................................................................................	19	1	11.00	11	5	1	0	5
...................................................................................................................................................................GGCAATACAACTTCAGTGCAAGC............................................................................................................................	23	1	11.00	11	11	0	0	0
...........................................................................................................GCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	20	1	11.00	11	11	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTGA.......................................................................................................................................................................................	22	1	10.00	10	9	0	0	1
.....................................................................................................................................................................CAATACAACTTCAGTGCAA..............................................................................................................................	19	1	9.00	9	1	0	2	6
....................................................................................................................................................................GCAATACAACTTCAGTGCAAG.............................................................................................................................	21	1	8.00	8	7	1	0	0
......................................................................................................................................................................AATACAACTTCAGTGCAAGCTT..........................................................................................................................	22	1	8.00	8	8	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTAAA......................................................................................................................................................................................	23	3	7.33	22	8	5	7	2
.........................................................................................................GTGCATTGTAGTCGCATA...........................................................................................................................................................................................	18	1	7.00	7	0	0	0	7
..........................................................................................................TGCATTGTAGTCGCATTGTCTGA.....................................................................................................................................................................................	23	1	7.00	7	6	0	0	1
.........................................................................................................GTGCATTGTAGTCGCATTGTCAAA.....................................................................................................................................................................................	24	1	7.00	7	5	0	1	1
.........................................................................................................GTGCATTGTAGTCGCATTGTCTA......................................................................................................................................................................................	23	1	7.00	7	6	0	0	1
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGCTG..........................................................................................................................	23	1	6.00	6	6	0	0	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGT............................................................................................................................	21	1	6.00	6	1	1	0	4
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGCTAA.........................................................................................................................	24	1	6.00	6	0	2	0	4
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGCTC..........................................................................................................................	23	1	5.00	5	3	0	0	2
.........................................................................................................GTGCATTGTAGTCGCATC...........................................................................................................................................................................................	18	1	5.00	5	5	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTC..........................................................................................................................................................................................	18	2	5.00	10	10	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCAT......................................................................................................................................................................................	23	1	5.00	5	3	1	0	1
.........................................................................................................GTGCATTGTAGTCGCATTGAA........................................................................................................................................................................................	21	1	5.00	5	2	1	0	2
...........................................................................................................GCATTGTAGTCGCATTGTCTG......................................................................................................................................................................................	21	1	5.00	5	5	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTCAA......................................................................................................................................................................................	22	1	4.00	4	4	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTCTT......................................................................................................................................................................................	22	1	4.00	4	4	0	0	0
.......................................................................................................AGGTGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	23	1	4.00	4	3	0	0	1
.........................................................................................................GTGCATTGTAGTCGCATTGAT........................................................................................................................................................................................	21	1	4.00	4	1	1	0	2

droYak3

CC--------CGATCAATCGGTCAA----------------------TTGCGACTGAGTGCCA---CCAGACTCTT--------ACT-CCAGAGATGTCACGAAGGTGCATTGTAGTCGCATTGTCTGTCCC--A---A----------T--T--G-C-TTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACAAA-CAACGCCGAGTGTCT-------CTGG--------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
.........................................................................................................GTGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	21	1	157070.00	157070	104190	33111	6266	659	4612	6766	1290	25	3	63	85
.........................................................................................................GTGCATTGTAGTCGCATTGT.........................................................................................................................................................................................	20	1	9614.00	9614	652	3283	137	139	1781	2642	946	8	0	26	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	22	1	3554.00	3554	1451	1318	194	27	180	277	105	0	0	2	0
..........................................................................................................TGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	20	1	2714.00	2714	71	2631	6	0	3	3	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	22	1	2560.00	2560	353	1482	94	533	37	39	21	0	0	1	0
.........................................................................................................GTGCATTGTAGTCGCATTG..........................................................................................................................................................................................	19	1	2135.00	2135	330	1383	7	26	167	197	22	0	0	3	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGCT...........................................................................................................................	22	1	1968.00	1968	10	1579	200	19	36	64	60	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTA........................................................................................................................................................................................	21	1	764.00	764	514	126	66	31	11	9	5	0	0	0	2
.........................................................................................................GTGCATTGTAGTCGCATTGTCTG......................................................................................................................................................................................	23	1	731.00	731	97	494	5	19	35	58	22	0	0	1	0
.........................................................................................................GTGCATTGTAGTCGCATTGTT........................................................................................................................................................................................	21	1	433.00	433	155	116	11	2	44	86	19	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCC.......................................................................................................................................................................................	22	1	415.00	415	263	35	91	5	5	16	0	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGT.........................................................................................................................................................................................	19	1	239.00	239	0	238	1	0	0	0	0	0	0	0	0
...........................................................................................................GCATTGTAGTCGCATTGTC........................................................................................................................................................................................	19	1	187.00	187	22	156	2	0	1	3	3	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCAA......................................................................................................................................................................................	23	1	143.00	143	2	86	7	41	2	4	1	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTG..........................................................................................................................................................................................	18	1	139.00	139	1	138	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................AATACAACTTCAGTGCAAGCT...........................................................................................................................	21	1	132.00	132	0	129	2	0	1	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATT...........................................................................................................................................................................................	18	1	123.00	123	18	50	1	0	15	34	0	0	0	5	0
..........................................................................................................TGCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	21	1	121.00	121	1	120	0	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGC.........................................................................................................................................................................................	20	1	115.00	115	50	1	36	0	3	17	8	0	0	0	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGC............................................................................................................................	21	1	110.00	110	2	83	19	1	4	1	0	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	21	1	96.00	96	0	96	0	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCG.......................................................................................................................................................................................	22	1	78.00	78	45	17	0	1	4	7	4	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGG.........................................................................................................................................................................................	20	1	55.00	55	40	3	0	1	3	7	1	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTCTG......................................................................................................................................................................................	22	1	55.00	55	1	54	0	0	0	0	0	0	0	0	0
..............................................................................................................................TGTCCC--A---A----------T--T--G-C-TTCAGG.................................................................................................................................................	18	1	53.00	53	3	6	9	26	6	3	0	0	0	0	0
............................................................................................................CATTGTAGTCGCATTGTC........................................................................................................................................................................................	18	1	52.00	52	33	16	2	0	0	0	1	0	0	0	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGCC...........................................................................................................................	22	1	52.00	52	0	1	51	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTT......................................................................................................................................................................................	23	1	47.00	47	5	31	0	0	3	6	2	0	0	0	0
........................................................................................................GGTGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	22	1	32.00	32	8	23	0	0	0	1	0	0	0	0	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAG.............................................................................................................................	20	1	24.00	24	1	13	0	0	3	4	3	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGA.........................................................................................................................................................................................	20	1	22.00	22	2	11	2	1	1	3	2	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTG........................................................................................................................................................................................	21	1	21.00	21	7	3	3	0	4	4	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTGT.....................................................................................................................................................................................	24	1	20.00	20	0	13	0	0	1	1	5	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTAA.......................................................................................................................................................................................	22	2	19.50	39	1	12	6	12	5	3	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATA...........................................................................................................................................................................................	18	1	19.00	19	1	1	0	0	7	10	0	0	0	0	0
.......................................................................................................................................................................ATACAACTTCAGTGCAAGCT...........................................................................................................................	20	1	16.00	16	0	13	1	0	0	0	2	0	0	0	0
...........................................................................................................GCATTGTAGTCGCATTGT.........................................................................................................................................................................................	18	1	16.00	16	0	15	0	0	0	1	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTT..........................................................................................................................................................................................	19	1	15.00	15	0	2	0	0	6	6	1	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTT........................................................................................................................................................................................	20	1	15.00	15	0	15	0	0	0	0	0	0	0	0	0
...................................................................................................................................................................GGCAATACAACTTCAGTGCAAGC............................................................................................................................	23	1	15.00	15	0	14	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGCTT..........................................................................................................................	23	1	13.00	13	0	7	4	0	1	0	1	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTA........................................................................................................................................................................................	20	1	11.00	11	0	11	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................GCAATACAACTTCAGTGCAAGC............................................................................................................................	22	1	11.00	11	0	7	3	0	0	1	0	0	0	0	0
...........................................................................................................GCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	20	1	10.00	10	0	9	0	0	0	1	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATG...........................................................................................................................................................................................	18	1	10.00	10	8	0	0	0	0	2	0	0	0	0	0
............................................................................................................CATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	19	1	9.00	9	9	0	0	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGC..............................................................................................................................................................................................	15	1	9.00	9	0	0	0	0	0	0	0	1	0	8	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCAAA.....................................................................................................................................................................................	24	1	9.00	9	0	6	2	1	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTA......................................................................................................................................................................................	23	1	8.00	8	3	4	0	1	0	0	0	0	0	0	0
........................................................................................................................................................................TACAACTTCAGTGCAAGCT...........................................................................................................................	19	1	8.00	8	0	7	1	0	0	0	0	0	0	0	0
.............................................................................................................ATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	18	1	8.00	8	7	1	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................AATACAACTTCAGTGCAAGC............................................................................................................................	20	1	6.00	6	0	6	0	0	0	0	0	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTCC.......................................................................................................................................................................................	21	1	6.00	6	0	6	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGCTA..........................................................................................................................	23	1	6.00	6	0	3	1	1	0	1	0	0	0	0	0
...........................................................................................................GCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	20	1	6.00	6	0	6	0	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTGA.....................................................................................................................................................................................	24	1	6.00	6	0	5	1	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTAAA......................................................................................................................................................................................	23	2	6.00	12	0	8	1	1	1	1	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTTA.......................................................................................................................................................................................	22	1	6.00	6	0	2	1	2	0	1	0	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTCAA......................................................................................................................................................................................	22	1	6.00	6	0	6	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................ACAACTTCAGTGCAAGCT...........................................................................................................................	18	1	6.00	6	0	6	0	0	0	0	0	0	0	0	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGCG...........................................................................................................................	22	1	6.00	6	0	6	0	0	0	0	0	0	0	0	0
....................................................................................................................................................................GCAATACAACTTCAGTGCAAGCT...........................................................................................................................	23	1	5.00	5	0	5	0	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTGTCC...................................................................................................................................................................................	26	1	5.00	5	0	4	1	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTC..........................................................................................................................................................................................	19	1	4.00	4	0	4	0	0	0	0	0	0	0	0	0
.......................................................................................................AGGTGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	23	1	4.00	4	1	2	0	0	0	1	0	0	0	0	0
...........................................................................................................GCATTGTAGTCGCATTGTCTG......................................................................................................................................................................................	21	1	4.00	4	0	4	0	0	0	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCA.............................................................................................................................................................................................	16	1	4.00	4	0	0	0	0	0	0	0	0	0	4	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAA..............................................................................................................................	19	1	4.00	4	0	4	0	0	0	0	0	0	0	0	0

droEre2

CC--------CGATCAATCAGTCAA----------------------TTGCGACTGAGTGCCA---CCAGACTCTC--------ACT-CCAGAGATGACACGAAGGTGCATTGTAGTCGCATTGTCTGTCCC--A---A----------T--T--G-C-TTCAGGCAATACAACTTCAGTGCAAGCTCTGTGCATTTCACAAA-CAACGCCGAGTGTTC-------CTGG--------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
.........................................................................................................GTGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	21	1	142950.00	142950	88427	1077	6394	402	20565	25985	100
.........................................................................................................GTGCATTGTAGTCGCATTGT.........................................................................................................................................................................................	20	1	26033.00	26033	12335	7	1479	46	6460	5706	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	22	1	7973.00	7973	5157	8	249	5	850	1704	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGCT...........................................................................................................................	22	1	7968.00	7968	5400	41	212	14	786	1499	16
..........................................................................................................TGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	20	1	7192.00	7192	7157	0	3	0	8	22	2
.........................................................................................................GTGCATTGTAGTCGCATTG..........................................................................................................................................................................................	19	1	6537.00	6537	5027	0	140	7	436	927	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	22	1	4538.00	4538	3660	2	42	66	183	585	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTG......................................................................................................................................................................................	23	1	2450.00	2450	1618	1	56	17	263	460	35
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGC............................................................................................................................	21	1	933.00	933	710	8	22	0	45	148	0
..........................................................................................................TGCATTGTAGTCGCATTGT.........................................................................................................................................................................................	19	1	890.00	890	888	0	0	0	1	1	0
.........................................................................................................GTGCATTGTAGTCGCATTGTT........................................................................................................................................................................................	21	1	832.00	832	419	0	53	3	179	178	0
.........................................................................................................GTGCATTGTAGTCGCATTGTA........................................................................................................................................................................................	21	1	525.00	525	303	5	16	1	30	170	0
..........................................................................................................TGCATTGTAGTCGCATTG..........................................................................................................................................................................................	18	1	444.00	444	441	0	0	0	0	3	0
..........................................................................................................TGCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	21	1	440.00	440	439	0	0	0	0	1	0
...........................................................................................................GCATTGTAGTCGCATTGTC........................................................................................................................................................................................	19	1	423.00	423	384	1	2	1	15	20	0
......................................................................................................................................................................AATACAACTTCAGTGCAAGCT...........................................................................................................................	21	1	414.00	414	392	0	6	0	6	10	0
.........................................................................................................GTGCATTGTAGTCGCATTGTG........................................................................................................................................................................................	21	1	407.00	407	391	2	4	0	3	7	0
.........................................................................................................GTGCATTGTAGTCGCATT...........................................................................................................................................................................................	18	1	338.00	338	206	1	8	0	13	110	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAG.............................................................................................................................	20	1	325.00	325	74	0	11	0	47	193	0
..........................................................................................................TGCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	21	1	286.00	286	286	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCAA......................................................................................................................................................................................	23	1	228.00	228	191	0	2	7	8	20	0
..............................................................................................................................TGTCCC--A---A----------T--T--G-C-TTCAGG.................................................................................................................................................	18	1	222.00	222	29	3	2	8	5	175	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTT......................................................................................................................................................................................	23	1	192.00	192	140	0	4	1	15	32	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCC.......................................................................................................................................................................................	22	1	148.00	148	101	5	5	0	10	27	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCG.......................................................................................................................................................................................	22	1	135.00	135	57	0	12	2	31	33	0
..........................................................................................................TGCATTGTAGTCGCATTGTCTG......................................................................................................................................................................................	22	1	133.00	133	133	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTGT.....................................................................................................................................................................................	24	1	84.00	84	28	0	2	0	34	17	3
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGCTT..........................................................................................................................	23	1	83.00	83	60	0	0	0	8	15	0
.........................................................................................................GTGCATTGTAGTCGCATTGA.........................................................................................................................................................................................	20	1	66.00	66	48	0	3	0	6	9	0
.........................................................................................................GTGCATTGTAGTCGCATTT..........................................................................................................................................................................................	19	1	58.00	58	42	0	3	0	5	8	0
.........................................................................................................GTGCATTGTAGTCGCATTC..........................................................................................................................................................................................	19	2	54.00	108	105	0	0	0	1	2	0
...........................................................................................................GCATTGTAGTCGCATTGT.........................................................................................................................................................................................	18	1	53.00	53	50	0	0	0	2	1	0
.........................................................................................................GTGCATTGTAGTCGCATTTC.........................................................................................................................................................................................	20	1	53.00	53	50	0	0	1	0	2	0
......................................................................................................................................................................AATACAACTTCAGTGCAAGC............................................................................................................................	20	1	52.00	52	51	0	0	0	1	0	0
............................................................................................................CATTGTAGTCGCATTGTC........................................................................................................................................................................................	18	1	51.00	51	32	0	0	0	6	13	0
.........................................................................................................GTGCATTGTAGTCGCATTGG.........................................................................................................................................................................................	20	1	48.00	48	40	1	4	0	2	1	0
.........................................................................................................GTGCATTGTAGTCGCATTGC.........................................................................................................................................................................................	20	1	42.00	42	9	4	5	0	10	14	0
........................................................................................................GGTGCATTGTAGTCGCATTGTC........................................................................................................................................................................................	22	1	38.00	38	36	0	0	0	0	2	0
.........................................................................................................GTGCATTGTAGTCGCATTGTAA.......................................................................................................................................................................................	22	2	37.00	74	37	0	2	3	14	18	0
..........................................................................................................TGCATTGTAGTCGCATTGTT........................................................................................................................................................................................	20	1	36.00	36	36	0	0	0	0	0	0
.......................................................................................................................................................................ATACAACTTCAGTGCAAGCT...........................................................................................................................	20	1	29.00	29	17	0	1	0	6	5	0
..............................................................................................................TTGTAGTCGCATTGTCTG......................................................................................................................................................................................	18	1	29.00	29	0	0	0	0	0	0	29
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGCTA..........................................................................................................................	23	1	28.00	28	15	1	0	0	0	2	10
...................................................................................................................................................................GGCAATACAACTTCAGTGCAAGC............................................................................................................................	23	1	26.00	26	22	2	0	0	1	1	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCAAA.....................................................................................................................................................................................	24	1	26.00	26	24	0	0	0	2	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTA........................................................................................................................................................................................	20	1	25.00	25	25	0	0	0	0	0	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAA..............................................................................................................................	19	1	24.00	24	13	0	0	0	3	8	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGCC...........................................................................................................................	22	1	22.00	22	8	11	0	0	2	1	0
..........................................................................................................TGCATTGTAGTCGCATTGTCAA......................................................................................................................................................................................	22	1	19.00	19	19	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTGA.....................................................................................................................................................................................	24	1	18.00	18	15	0	0	0	2	1	0
...........................................................................................................GCATTGTAGTCGCATTGTCT.......................................................................................................................................................................................	20	1	18.00	18	17	0	0	0	0	1	0
.....................................................................................................................................................................CAATACAACTTCAGTGCA...............................................................................................................................	18	1	17.00	17	2	0	0	0	0	15	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTA......................................................................................................................................................................................	23	1	16.00	16	10	0	0	0	1	5	0
..........................................................................................................TGCATTGTAGTCGCATTGTCTT......................................................................................................................................................................................	22	1	14.00	14	14	0	0	0	0	0	0
....................................................................................................................................................................GCAATACAACTTCAGTGCAAGC............................................................................................................................	22	1	13.00	13	11	1	0	0	0	1	0
.........................................................................................................GTGCATTGTAGTCGCATA...........................................................................................................................................................................................	18	1	13.00	13	1	0	1	0	0	11	0
.........................................................................................................GTGCATTGTAGTCGCATTGTGA.......................................................................................................................................................................................	22	1	12.00	12	12	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCAT......................................................................................................................................................................................	23	1	12.00	12	9	0	0	0	1	2	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGCA...........................................................................................................................	22	1	12.00	12	11	0	1	0	0	0	0
...........................................................................................................GCATTGTAGTCGCATTGTCA.......................................................................................................................................................................................	20	1	10.00	10	10	0	0	0	0	0	0
...........................................................................................................GCATTGTAGTCGCATTGTCTG......................................................................................................................................................................................	21	1	9.00	9	9	0	0	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTCC.......................................................................................................................................................................................	21	1	9.00	9	9	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTC......................................................................................................................................................................................	23	1	9.00	9	4	0	0	0	0	5	0
..........................................................................................................TGCATTGTAGTCGCATTGTCG.......................................................................................................................................................................................	21	1	9.00	9	9	0	0	0	0	0	0
..........................................................................................................TGCATTGTAGTCGCATTGTCTGT.....................................................................................................................................................................................	23	1	8.00	8	8	0	0	0	0	0	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGCG...........................................................................................................................	22	1	8.00	8	5	0	0	0	0	3	0
....................................................................................................................................................................GCAATACAACTTCAGTGCAAGCT...........................................................................................................................	23	1	7.00	7	7	0	0	0	0	0	0
.........................................................................................................GTGCATTGTAGTCGCATC...........................................................................................................................................................................................	18	1	7.00	7	6	0	0	0	0	1	0
.....................................................................................................................................................................CAATACAACTTCAGTGCAAGT............................................................................................................................	21	1	7.00	7	0	0	0	0	2	5	0
.........................................................................................................GTGCATTGTAGTCGCATTGTCTGTCCC--................................................................................................................................................................................	27	1	7.00	7	5	0	0	0	2	0	0

dgr-mir-33

scaffold_15110:18214472-18214563 -

Known

Unknown

intron

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads

-36.3	-36.1	-36.0