ID:

dgr-mir-263a

 Coordinate:

scaffold_15126:6621370-6621458 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-35.5 -35.4 -35.4

Flybase annnotation

pre_miRNA [Dgri\mir-263a-RM]; miRNA [Dgri\miR-263a-RA]

No Repeatable elements found

Sense Strand Reads

TTTCTGCTGGGTAAGTTATTTTTTTCAAGTGATTTTTCTTGTTGTTCTGCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTATTTTAACACGCCCGTGATCTCTTAGTGGCATCTATGGTGCGGGATATTACGTGCAGAAACCGAAAGCTTTTCTCGCTCCGTATTCCAAGCATGCTTC

*************************************************.((((((.(((.((..(((.((((((.(((..(((((((((.........)).)))))))))).)))))).)))..)).)))))))))....************************************************ 		Read size # Mismatch Hit Count Total Norm Total V109

male body		 M041

female body
................................................................AATGGCACTGGAAGAATTCACGGG..................................................................................................... 24 0 1 7031.00 7031 3562 3469
................................................................AATGGCACTGGAAGAATTCACG....................................................................................................... 22 0 1 6212.00 6212 3497 2715
................................................................AATGGCACTGGAAGAATTCACGG...................................................................................................... 23 0 1 3970.00 3970 1588 2382
................................................................AATGGCACTGGAAGAATTCAC........................................................................................................ 21 0 1 3761.00 3761 2257 1504
................................................................AATGGCACTGGAAGAATTCA......................................................................................................... 20 0 1 2478.00 2478 1735 743
................................................................AATGGCACTGGAAGAATTC.......................................................................................................... 19 0 1 685.00 685 530 155
.................................................................ATGGCACTGGAAGAATTCACGGG..................................................................................................... 23 0 1 381.00 381 5 376
.................................................................ATGGCACTGGAAGAATTCACG....................................................................................................... 21 0 1 298.00 298 3 295
.................................................................ATGGCACTGGAAGAATTCACGG...................................................................................................... 22 0 1 248.00 248 3 245
................................................................AATGGCACTGGAAGAATTCACGGGT.................................................................................................... 25 1 1 199.00 199 117 82
.................................................................ATGGCACTGGAAGAATTCAC........................................................................................................ 20 0 1 172.00 172 3 169
................................................................AATGGCACTGGAAGAATTCACGGGA.................................................................................................... 25 1 1 171.00 171 94 77
.................................................................ATGGCACTGGAAGAATTCA......................................................................................................... 19 0 1 79.00 79 1 78
................................................................AATGGCACTGGAAGAATTCACGGT..................................................................................................... 24 1 1 72.00 72 45 27
........................................................................................................CGTGATCTCTTAGTGGCATCTA............................................................... 22 0 1 59.00 59 24 35
................................................................AATGGCACTGGAAGAATT........................................................................................................... 18 0 1 57.00 57 7 50
................................................................AATGGCACTGGAAGAATCCACG....................................................................................................... 22 1 1 45.00 45 45 0
................................................................AATGGCACTGGAAGAATCCACGGG..................................................................................................... 24 1 1 42.00 42 41 1
................................................................AATGGCACTGGAAGAATTCACT....................................................................................................... 22 1 1 40.00 40 28 12
................................................................AATGGCACTGGAAGAATTCACGT...................................................................................................... 23 1 1 38.00 38 23 15
................................................................AATGGCACTGGAAGAATACACGGG..................................................................................................... 24 1 1 36.00 36 36 0
..................................................................TGGCACTGGAAGAATTCACGGG..................................................................................................... 22 0 1 33.00 33 0 33
................................................................AATGGCACTGGAAGAATCCAC........................................................................................................ 21 1 1 31.00 31 31 0
................................................................AATGGCACTGGAAGAATTCACGCG..................................................................................................... 24 1 1 30.00 30 30 0
................................................................AATGGCACTGGAAGAATACACG....................................................................................................... 22 1 1 29.00 29 29 0
................................................................AATGGCACTGGAAGAATTCACGTG..................................................................................................... 24 1 1 26.00 26 26 0
................................................................AATGGCACTGGAAGAATTCACA....................................................................................................... 22 1 1 24.00 24 15 9
................................................................AATGGCACTGGAAGAATTCACGAG..................................................................................................... 24 1 1 23.00 23 23 0
................................................................AATGGCCCTGGAAGAATTCACG....................................................................................................... 22 1 1 20.00 20 19 1
................................................................AATGGCACCGGAAGAATTCACGGG..................................................................................................... 24 1 1 18.00 18 18 0
................................................................AATGGCACTGGAAGAATTCACGA...................................................................................................... 23 1 1 18.00 18 11 7
..................................................................TGGCACTGGAAGAATTCACG....................................................................................................... 20 0 1 17.00 17 0 17
................................................................AATGGCACTGGAAGAATGCACG....................................................................................................... 22 1 1 16.00 16 16 0
................................................................AATGGCACTGGAAGAATACAC........................................................................................................ 21 1 1 15.00 15 15 0
................................................................AATGGCACCGGAAGAATTCACG....................................................................................................... 22 1 1 15.00 15 15 0
................................................................AATGGCACTGGAAGAATCCA......................................................................................................... 20 1 1 15.00 15 15 0
................................................................AATGGCACTGGAAGAATGCAC........................................................................................................ 21 1 1 15.00 15 15 0
..................................................................TGGCACTGGAAGAATTCACGG...................................................................................................... 21 0 1 15.00 15 0 15
.................................................................ATGGCACTGGAAGAATTCACGGGA.................................................................................................... 24 1 1 14.00 14 0 14
................................................................AATGGCACTGGAAGAATTCACGC...................................................................................................... 23 1 1 14.00 14 12 2
................................................................AATGGCACTGGAAGAATACA......................................................................................................... 20 1 1 13.00 13 13 0
.................................................................ATGGCACTGGAAGAATTC.......................................................................................................... 18 0 1 13.00 13 0 13
..................................................................TGGCACTGGAAGAATTCAC........................................................................................................ 19 0 1 13.00 13 0 13
................................................................AATGGCCCTGGAAGAATTCACGGG..................................................................................................... 24 1 1 12.00 12 12 0
................................................................AATGGAACTGGAAGAATTCACG....................................................................................................... 22 1 1 12.00 12 11 1
................................................................AATGGCACTGGAAGAATCCACGG...................................................................................................... 23 1 1 12.00 12 12 0
.................................................................ATGGCACTGGAAGAATTCACGGGT.................................................................................................... 24 1 1 12.00 12 1 11
...............................................................CAATGGCACTGGAAGAATTCACG....................................................................................................... 23 1 1 12.00 12 1 11
................................................................AACGGCACTGGAAGAATTCACG....................................................................................................... 22 1 1 12.00 12 12 0
...............................................................CAATGGCACTGGAAGAATTCACGGG..................................................................................................... 25 1 1 12.00 12 0 12
................................................................AACGGCACTGGAAGAATTCACGGG..................................................................................................... 24 1 1 11.00 11 10 1
................................................................AATGGCACTGGAAGAATTCACGGGTT................................................................................................... 26 1 1 11.00 11 7 4
................................................................AATGGCCCTGGAAGAATTCAC........................................................................................................ 21 1 1 11.00 11 11 0
................................................................AATGGCACTGGAAGAATGCACGGG..................................................................................................... 24 1 1 11.00 11 11 0
................................................................AATGGCGCTGGAAGAATTCACG....................................................................................................... 22 1 1 10.00 10 9 1
................................................................AATGGTACTGGAAGAATTCACGGG..................................................................................................... 24 1 1 10.00 10 10 0
........................................................................................................CGTGATCTCTTAGTGGCATCT................................................................ 21 0 1 10.00 10 6 4
................................................................AATGGAACTGGAAGAATTCACGGG..................................................................................................... 24 1 1 10.00 10 9 1
................................................................AATGGCACAGGAAGAATTCACG....................................................................................................... 22 1 1 10.00 10 10 0
................................................................AATCGCACTGGAAGAATTCACGGG..................................................................................................... 24 1 1 9.00 9 8 1
...............................................................CAATGGCACTGGAAGAATTCAC........................................................................................................ 22 1 1 9.00 9 3 6
................................................................AATGGCACTGGAAGAATTCAA........................................................................................................ 21 1 1 9.00 9 6 3
................................................................AATGGAACTGGAAGAATTCAC........................................................................................................ 21 1 1 9.00 9 9 0
................................................................AATGCCACTGGAAGAATTCACG....................................................................................................... 22 1 1 9.00 9 9 0
................................................................AATGGCACCGGAAGAATTCAC........................................................................................................ 21 1 1 9.00 9 9 0
................................................................AATGGCACTGGAAGAATTCACGGC..................................................................................................... 24 1 1 9.00 9 5 4
................................................................AATGGCACTGGAAGAATGCACGG...................................................................................................... 23 1 1 9.00 9 9 0
................................................................AATGGCACCGGAAGAATTCACGG...................................................................................................... 23 1 1 9.00 9 9 0
................................................................AATGGCACTGGAAGAATTCACGGA..................................................................................................... 24 1 1 8.00 8 5 3
................................................................AATGGCACCGGAAGAATTCA......................................................................................................... 20 1 1 8.00 8 8 0
................................................................AATGGCACTGGAAGAATTCACC....................................................................................................... 22 1 1 8.00 8 5 3
................................................................AATGGCCCTGGAAGAATTCA......................................................................................................... 20 1 1 8.00 8 8 0
................................................................AATGGCACAGGAAGAATTCACGGG..................................................................................................... 24 1 1 8.00 8 8 0
................................................................AATGGGACTGGAAGAATTCACGGG..................................................................................................... 24 1 1 8.00 8 8 0
................................................................AATGGCACTGGAAGAATTCACGGGC.................................................................................................... 25 1 1 8.00 8 5 3
.................................................................AATGCACTGGAAGAATTCACG....................................................................................................... 21 2 1 8.00 8 7 1
................................................................AATGGCACTGGAAGAATTCACGGTT.................................................................................................... 25 2 1 8.00 8 7 1
................................................................AATGGAACTGGAAGAATTCACGG...................................................................................................... 23 1 1 7.00 7 7 0
...................................................................GGCACTGGAAGAATTCACGGG..................................................................................................... 21 0 1 7.00 7 0 7
................................................................AATGGCACTGGAAGAATTCACTGG..................................................................................................... 24 1 1 7.00 7 5 2
................................................................AATGGCACTGGAAGAATACACGG...................................................................................................... 23 1 1 7.00 7 7 0
...............................................................CAATGGCACTGGAAGAATTCACGG...................................................................................................... 24 1 1 6.00 6 0 6
................................................................ACTGGCACTGGAAGAATTCACG....................................................................................................... 22 1 1 6.00 6 6 0
................................................................AACGGCACTGGAAGAATTCAC........................................................................................................ 21 1 1 6.00 6 5 1
................................................................AAAGGCACTGGAAGAATTCACGGG..................................................................................................... 24 1 1 6.00 6 6 0
................................................................ACTGGCACTGGAAGAATTCACGGG..................................................................................................... 24 1 1 6.00 6 6 0
................................................................AATGTCACTGGAAGAATTCACGGG..................................................................................................... 24 1 1 6.00 6 4 2
................................................................AATCGCACTGGAAGAATTCAC........................................................................................................ 21 1 1 6.00 6 6 0
................................................................AATGGCCCTGGAAGAATTCACGG...................................................................................................... 23 1 1 6.00 6 6 0
................................................................AATTGCACTGGAAGAATTCAC........................................................................................................ 21 1 1 6.00 6 6 0
................................................................AATGGCACTGGAAGAATTCACAGG..................................................................................................... 24 1 1 6.00 6 6 0
................................................................AATGGGACTGGAAGAATTCACG....................................................................................................... 22 1 1 6.00 6 6 0
...............................................................TAATGGCACTGGAAGAATTCACG....................................................................................................... 23 0 1 6.00 6 0 6
................................................................AATGACACTGGAAGAATTCACG....................................................................................................... 22 1 1 6.00 6 4 2
................................................................AATGGCACTGGAAGAATCC.......................................................................................................... 19 1 1 5.00 5 5 0
................................................................AATTGCACTGGAAGAATTCACGGG..................................................................................................... 24 1 1 5.00 5 5 0
................................................................AATGGCACTGGAAGAATTCAAGGG..................................................................................................... 24 1 1 5.00 5 5 0
................................................................AATGGTACTGGAAGAATTCACG....................................................................................................... 22 1 1 5.00 5 4 1
................................................................AATGGCACTGGAAGAATTCAAG....................................................................................................... 22 1 1 5.00 5 4 1
................................................................AATGGCACTGGAAGAATTCACGGGAA................................................................................................... 26 2 1 5.00 5 0 5
................................................................AAGGGCACTGGAAGAATTCACGGG..................................................................................................... 24 1 1 5.00 5 5 0
................................................................AATGGCACTGGAAGAACTCAC........................................................................................................ 21 1 1 5.00 5 5 0
................................................................AATAGCACTGGAAGAATTCAC........................................................................................................ 21 1 1 5.00 5 3 2
................................................................AAAGGCACTGGAAGAATTCACG....................................................................................................... 22 1 1 5.00 5 5 0
................................................................AATGGCTCTGGAAGAATTCACG....................................................................................................... 22 1 1 5.00 5 5 0
................................................................AATGGTACTGGAAGAATTCACGG...................................................................................................... 23 1 1 5.00 5 3 2
................................................................AATGGCACTGGAAGAATTCACGGGTTT.................................................................................................. 27 1 1 5.00 5 3 2
................................................................AATCGCACTGGAAGAATTCACG....................................................................................................... 22 1 1 5.00 5 4 1
................................................................AATGGCACTGGAAGAATTCCCGGG..................................................................................................... 24 1 1 5.00 5 5 0
................................................................AATGGGACTGGAAGAATTCAC........................................................................................................ 21 1 1 5.00 5 5 0
................................................................AATGGAACTGGAAGAATTCA......................................................................................................... 20 1 1 5.00 5 5 0
................................................................AATGGTACTGGAAGAATTCAC........................................................................................................ 21 1 1 5.00 5 5 0
................................................................AATGGCTCTGGAAGAATTCACGG...................................................................................................... 23 1 1 5.00 5 4 1
................................................................AATGGCACTGGAAGAATGCA......................................................................................................... 20 1 1 5.00 5 5 0
................................................................AATGGCACTGGAAGACTTCACG....................................................................................................... 22 1 1 5.00 5 5 0
................................................................AATGGCTCTGGAAGAATTCACGGG..................................................................................................... 24 1 1 4.00 4 4 0
................................................................AATGGGACTGGAAGAATTCACGG...................................................................................................... 23 1 1 4.00 4 4 0
................................................................AATGGCTCTGGAAGAATTCAC........................................................................................................ 21 1 1 4.00 4 4 0
................................................................AATGGCACTGGAAGAATAC.......................................................................................................... 19 1 1 4.00 4 4 0
...............................................................TAATGGCACTGGAAGAATTCACGGG..................................................................................................... 25 0 1 4.00 4 0 4
.................................................................ATGGCACTGGAAGAATTCACGGT..................................................................................................... 23 1 1 4.00 4 0 4
................................................................AATGGCACTGGAAGAATTAAC........................................................................................................ 21 1 1 4.00 4 3 1
................................................................AATGGCACGGGAAGAATTCACGGG..................................................................................................... 24 1 1 4.00 4 4 0
................................................................AATGGCACTGCAAGAATTCAC........................................................................................................ 21 1 1 4.00 4 4 0
...............................................................CAATGGCACTGGAAGAATTCA......................................................................................................... 21 1 1 4.00 4 3 1
................................................................AATGGCACTGGAAGAATTT.......................................................................................................... 19 1 1 4.00 4 3 1
................................................................AATGGCACTGGAAGAATTCATGGG..................................................................................................... 24 1 1 4.00 4 4 0
................................................................ACTGGCACTGGAAGAATTCACGG...................................................................................................... 23 1 1 4.00 4 4 0
................................................................AATGGCACTGGAAGAATTCGCGGG..................................................................................................... 24 1 1 4.00 4 1 3
................................................................AATGCCACTGGAAGAATTCACGG...................................................................................................... 23 1 1 4.00 4 2 2
..................................................................TGGCACTGGAAGAATTCA......................................................................................................... 18 0 1 4.00 4 0 4
................................................................AATGGCACTGGAAGAATTCCCG....................................................................................................... 22 1 1 4.00 4 4 0
................................................................AGTGGCACTGGAAGAATTCACGGG..................................................................................................... 24 1 1 4.00 4 1 3
................................................................AATGGCAATGGAAGAATTCACG....................................................................................................... 22 1 1 4.00 4 4 0
................................................................AATGGCGCTGGAAGAATTCACGGG..................................................................................................... 24 1 1 4.00 4 3 1
................................................................CATGGCACTGGAAGAATTCACG....................................................................................................... 22 1 1 4.00 4 3 1
................................................................AATGGCACTGGCAGAATTCA......................................................................................................... 20 1 1 4.00 4 4 0
.................................................................AATGCACTGGAAGAATTCACGGG..................................................................................................... 23 2 1 4.00 4 4 0
................................................................AATGGCACTGGAAGAATTAACGGG..................................................................................................... 24 1 1 4.00 4 2 2
................................................................AATGGCACTGGAAGCATTCACG....................................................................................................... 22 1 1 4.00 4 4 0
................................................................AATGGCACTGCAAGAATTCACGGG..................................................................................................... 24 1 1 4.00 4 4 0
................................................................AATGGCACGGGAAGAATTCACG....................................................................................................... 22 1 1 4.00 4 4 0
................................................................AATGGCACTGGAAGAGTTCACG....................................................................................................... 22 1 1 3.00 3 2 1
................................................................AATGGCACTGGAACAATTCAC........................................................................................................ 21 1 1 3.00 3 3 0
................................................................AATGGCGCTGGAAGAATTCAC........................................................................................................ 21 1 1 3.00 3 3 0
...................................................................GGCACTGGAAGAATTCAC........................................................................................................ 18 0 1 3.00 3 1 2
................................................................AAGGGCACTGGAAGAATTCA......................................................................................................... 20 1 1 3.00 3 3 0
................................................................AATGTCACTGGAAGAATTCACGG...................................................................................................... 23 1 1 3.00 3 2 1
................................................................AATGGCACTGGAAGAATTCGCGG...................................................................................................... 23 1 1 3.00 3 1 2
................................................................AATGTCACTGGAAGAATTCAC........................................................................................................ 21 1 1 3.00 3 3 0
................................................................ATTGGCACTGGAAGAATTCACG....................................................................................................... 22 1 1 3.00 3 2 1
................................................................ACTGGCACTGGAAGAATTCA......................................................................................................... 20 1 1 3.00 3 3 0
................................................................AATGGCGCTGGAAGAATTC.......................................................................................................... 19 1 1 3.00 3 3 0
...............................................................AAATGGCACTGGAAGAATTCACGG...................................................................................................... 24 1 1 3.00 3 0 3
...............................................................AAATGGCACTGGAAGAATTCACGGG..................................................................................................... 25 1 1 3.00 3 0 3
................................................................AATGGCACTGGAGGAATTCACGGG..................................................................................................... 24 1 1 3.00 3 2 1
................................................................AATGGCACTGAAAGAATTCACGGG..................................................................................................... 24 1 1 3.00 3 2 1
................................................................AATAGCACTGGAAGAATTCA......................................................................................................... 20 1 1 3.00 3 2 1
................................................................AATGGCACGGGAAGAATTCACGG...................................................................................................... 23 1 1 3.00 3 2 1
................................................................AAAGGCACTGGAAGAATTC.......................................................................................................... 19 1 1 3.00 3 3 0
....................................................................GCACTGGAAGAATTCACG....................................................................................................... 18 0 1 3.00 3 0 3
................................................................AATGGCACTGGAAGAACTCACGGG..................................................................................................... 24 1 1 3.00 3 2 1
................................................................AACGGCACTGGAAGAATTCACGG...................................................................................................... 23 1 1 3.00 3 3 0
................................................................CATGGCACTGGAAGAATTCA......................................................................................................... 20 1 1 3.00 3 2 1
................................................................AATGGCACTGGAAGAATTCACAG...................................................................................................... 23 1 1 3.00 3 2 1
...............................................................GAATGGCACTGGAAGAATTCACGGG..................................................................................................... 25 1 1 3.00 3 0 3
................................................................AATGGCACTGGCAGAATTCACGG...................................................................................................... 23 1 1 3.00 3 3 0
................................................................AATGGCACTGGGAGAATTCA......................................................................................................... 20 1 1 3.00 3 3 0
................................................................AATAGCACTGGAAGAATTCACG....................................................................................................... 22 1 1 3.00 3 3 0
................................................................AATGGCACTGGAAGAATTCACGGGAT................................................................................................... 26 1 1 3.00 3 1 2
...............................................................GAATGGCACTGGAAGAATTCAC........................................................................................................ 22 1 1 3.00 3 0 3
................................................................AATGGCACTGGAGGAATTCACGG...................................................................................................... 23 1 1 3.00 3 2 1
................................................................AATGCCACTGGAAGAATTCACGGG..................................................................................................... 24 1 1 3.00 3 3 0
................................................................AATGTCACTGGAAGAATTCACG....................................................................................................... 22 1 1 3.00 3 2 1
................................................................AATGGCATTGGAAGAATTCACGGG..................................................................................................... 24 1 1 3.00 3 3 0
................................................................AATGGCACTGGCAGAATTCACGGG..................................................................................................... 24 1 1 3.00 3 3 0
................................................................AATGGCACTGGAAGAATTCATG....................................................................................................... 22 1 1 3.00 3 2 1
.................................................................AATGCACTGGAAGAATTCACGG...................................................................................................... 22 2 1 3.00 3 1 2
................................................................AATGGCACTGGAAGAATTCAGGGG..................................................................................................... 24 1 1 3.00 3 2 1
................................................................AATGGCACTGGAAGAATTCACCGG..................................................................................................... 24 1 1 3.00 3 3 0
................................................................AATGGCACTTGAAGAATTCACG....................................................................................................... 22 1 1 3.00 3 3 0
................................................................AATGGCACAGGAAGAATTCA......................................................................................................... 20 1 1 3.00 3 3 0
................................................................AATGGCACGGGAAGAATTCA......................................................................................................... 20 1 1 3.00 3 3 0
................................................................GATGGCACTGGAAGAATTCACGG...................................................................................................... 23 1 1 3.00 3 1 2
................................................................AATGGCTCTGGAAGAATTCA......................................................................................................... 20 1 1 3.00 3 3 0
................................................................AATCGCACTGGAAGAATTCA......................................................................................................... 20 1 1 3.00 3 3 0
...................................................................GGCACTGGAAGAATTCACG....................................................................................................... 19 0 1 2.00 2 0 2
................................................................AATGGCACTGGAAGAACTCACGG...................................................................................................... 23 1 1 2.00 2 1 1
................................................................AATGGCACTGGAACAATTCACGGG..................................................................................................... 24 1 1 2.00 2 1 1
................................................................AATGGCACTGGAAGAATACACGGGA.................................................................................................... 25 2 1 2.00 2 2 0
................................................................AATGGCACTGGGAGAATTCAC........................................................................................................ 21 1 1 2.00 2 2 0
................................................................AATGTCACTGGAAGAATTCA......................................................................................................... 20 1 1 2.00 2 2 0
................................................................AAAGGCACTGGAAGAATTCA......................................................................................................... 20 1 1 2.00 2 2 0
...............................................................AAATGGCACTGGAAGAATTCAC........................................................................................................ 22 1 1 2.00 2 0 2
................................................................AATGGCACTGGAAGAATACACT....................................................................................................... 22 2 1 2.00 2 2 0
................................................................AATGGCACTGGAAGAATTCT......................................................................................................... 20 1 1 2.00 2 0 2
................................................................AATGGCACTGGAAGAATTCCCGG...................................................................................................... 23 1 1 2.00 2 2 0
................................................................AATGGCAATGGAAGAATTCAC........................................................................................................ 21 1 1 2.00 2 2 0
................................................................AACGGCACTGGAAGAATTC.......................................................................................................... 19 1 1 2.00 2 2 0
................................................................AATGGCACTGGAAGAATTCACGATT.................................................................................................... 25 3 1 2.00 2 0 2
................................................................AATTGCACTGGAAGAATTCACG....................................................................................................... 22 1 1 2.00 2 1 1
................................................................AATGGCACTGTAAGAATTCACG....................................................................................................... 22 1 1 2.00 2 1 1
................................................................AATGGCACTGGAAGACTTCACGGG..................................................................................................... 24 1 1 2.00 2 2 0
................................................................AAAGGCACTGGAAGAATTCAC........................................................................................................ 21 1 1 2.00 2 2 0
................................................................AATGGCACTGGAAGAATGCACGGGA.................................................................................................... 25 2 1 2.00 2 2 0
................................................................AATGGCACTGGAAGACTTCA......................................................................................................... 20 1 1 2.00 2 2 0
................................................................GATGGCACTGGAAGAATTCACGGG..................................................................................................... 24 1 1 2.00 2 1 1
..............................................................AAAATGGCACTGGAAGAATTCACG....................................................................................................... 24 2 1 2.00 2 0 2
................................................................AATGCCACTGGAAGAATTCAC........................................................................................................ 21 1 1 2.00 2 2 0
................................................................AATGACACTGGAAGAATTCACGG...................................................................................................... 23 1 1 2.00 2 2 0
................................................................AGTGGCACTGGAAGAATTCAC........................................................................................................ 21 1 1 2.00 2 0 2
................................................................CATGGCACTGGAAGAATTCAC........................................................................................................ 21 1 1 2.00 2 2 0
................................................................AATGGCACTGGAGGAATTCACG....................................................................................................... 22 1 1 2.00 2 1 1
................................................................AATGGCACTGGAAAAATTCACGGG..................................................................................................... 24 1 1 2.00 2 1 1
....................................................................GCACTGGAAGAATTCACGGG..................................................................................................... 20 0 1 2.00 2 0 2
................................................................AATGACACTGGAAGAATTCACGGG..................................................................................................... 24 1 1 2.00 2 1 1
................................................................AAAGGCACTGGAAGAATTCACGG...................................................................................................... 23 1 1 2.00 2 2 0
................................................................AATGGCACTGGAAGAATCCACGGT..................................................................................................... 24 2 1 2.00 2 2 0
................................................................AATGGCACTGGACGAATTCACGGG..................................................................................................... 24 1 1 2.00 2 2 0
................................................................AATGGCACCGGAAGAATTC.......................................................................................................... 19 1 1 2.00 2 2 0
................................................................AATGGCACTGGAAGAATTCACGGTTTT.................................................................................................. 27 2 1 2.00 2 0 2
................................................................AATGGCACTGGAAGAATTCATGG...................................................................................................... 23 1 1 2.00 2 0 2
................................................................AATGGCACTAGAAGAATTCA......................................................................................................... 20 1 1 2.00 2 2 0
................................................................AATGGCACTCGAAGAATTCAC........................................................................................................ 21 1 1 2.00 2 1 1
................................................................AGTGGCACTGGAAGAATTCACG....................................................................................................... 22 1 1 2.00 2 1 1
................................................................AATGGCACTGGAAAAATTCACGG...................................................................................................... 23 1 1 2.00 2 2 0
................................................................AATGGCCCTGGAAGAATTCACGGGA.................................................................................................... 25 2 1 2.00 2 2 0
................................................................AATGGCCCTGGAAGAATTC.......................................................................................................... 19 1 1 2.00 2 2 0
................................................................AATGGCACTGGAAGAATTCACGGGG.................................................................................................... 25 0 1 2.00 2 0 2
.........................................................................................................GTGATCTCTTAGTGGCATCTA............................................................... 21 0 1 2.00 2 0 2
................................................................AATGGCACTGGCAGAATTCACG....................................................................................................... 22 1 1 2.00 2 2 0
.........................................................................................................GTGATCTCTTAGTGGCATCT................................................................ 20 0 1 2.00 2 0 2
................................................................AATGGCACTGGAAGAATTCAT........................................................................................................ 21 1 1 2.00 2 1 1
................................................................AATGGCAATGGAAGAATTCACGG...................................................................................................... 23 1 1 2.00 2 2 0
................................................................AATGGCACTGGAAGAATTTAC........................................................................................................ 21 1 1 2.00 2 1 1
................................................................AATGGCGCTGGAAGAATTCACGG...................................................................................................... 23 1 1 2.00 2 1 1
...............................................................CAATGGCACTGGAAGAATTC.......................................................................................................... 20 1 1 2.00 2 2 0
................................................................AATGGCACTAGAAGAATTCACG....................................................................................................... 22 1 1 2.00 2 2 0
................................................................AATGGCACTGGAGGAATTCAC........................................................................................................ 21 1 1 2.00 2 1 1
................................................................AATGGCACTGGAACAATTCACG....................................................................................................... 22 1 1 2.00 2 2 0
................................................................CATGGCACTGGAAGAATTC.......................................................................................................... 19 1 1 2.00 2 2 0
................................................................GATGGCACTGGAAGAATTCACG....................................................................................................... 22 1 1 2.00 2 0 2
................................................................AATGGTACTGGAAGAATTCA......................................................................................................... 20 1 1 2.00 2 2 0
................................................................AATGGCAATGGAAGAATTCA......................................................................................................... 20 1 1 2.00 2 2 0
................................................................AATGGCACTTGAAGAATTCACGGG..................................................................................................... 24 1 1 2.00 2 2 0
................................................................GATGGCACTGGAAGAATTCA......................................................................................................... 20 1 1 2.00 2 1 1
..............................................................ATAATGGCACTGGAAGAATTCACGG...................................................................................................... 25 1 1 2.00 2 0 2
................................................................AATGGTACTGGAAGAATTC.......................................................................................................... 19 1 1 2.00 2 2 0
................................................................AATGGCACTGGAACAATTCA......................................................................................................... 20 1 1 2.00 2 1 1
...............................................................GAATGGCACTGGAAGAATTCACG....................................................................................................... 23 1 1 2.00 2 0 2
................................................................AATAGCACTGGAAGAATTCACGGG..................................................................................................... 24 1 1 2.00 2 2 0
................................................................AATGGCACTGGAAGAATTGACG....................................................................................................... 22 1 1 2.00 2 2 0
................................................................AATGGCACTGCAAGAATTCA......................................................................................................... 20 1 1 2.00 2 2 0
...................................................................GGCACTGGAAGAATTCACGG...................................................................................................... 20 0 1 2.00 2 0 2
................................................................AATCGCACTGGAAGAATTCACGG...................................................................................................... 23 1 1 2.00 2 2 0
................................................................AATGGCACTGCAAGAATTCACG....................................................................................................... 22 1 1 2.00 2 2 0
................................................................GATGGCACTGGAAGAATTCAC........................................................................................................ 21 1 1 2.00 2 1 1
................................................................AATGGCACAGGAAGAATTC.......................................................................................................... 19 1 2 1.50 3 3 0
................................................................AATGGCACTGGAAGAATTCACGCCTT................................................................................................... 26 3 1 1.00 1 0 1
................................................................AATGGCACTGGAAGAATTCACGGCA.................................................................................................... 25 2 1 1.00 1 0 1
...............................................................TAATGGCACTGGAAGAATT........................................................................................................... 19 0 1 1.00 1 0 1
...............................................................CAATGGCACTGGAAGAATTCCCGGGT.................................................................................................... 26 3 1 1.00 1 1 0
...................................................................GGCACTGGAAGAATTCACGGGT.................................................................................................... 22 1 1 1.00 1 0 1
..............................................................ATAATGGCACTGGAAGAATTCACGGG..................................................................................................... 26 1 1 1.00 1 0 1
................................................................AACGGCACTGGAAGAACTCACG....................................................................................................... 22 2 1 1.00 1 1 0
................................................................AATAGCACTGGAAGAATTCACGG...................................................................................................... 23 1 1 1.00 1 1 0
.............................................................TCCAATGGCACTGGAAGAATTCA......................................................................................................... 23 3 1 1.00 1 0 1
...............................................................TAATGGCACTGGAAGAATTCACGGGT.................................................................................................... 26 1 1 1.00 1 0 1
................................................................AATGGCACTGGAAGAATTTACG....................................................................................................... 22 1 1 1.00 1 1 0
................................................................AATGGCACTGGAAGAATTCACGAGGA................................................................................................... 26 2 1 1.00 1 0 1
................................................................AACGGCACTGGAAGAATTCACGGGT.................................................................................................... 25 2 1 1.00 1 1 0
.................................................................ATGGCACTGGAAGAATTCACGGGTT................................................................................................... 25 1 1 1.00 1 0 1
................................................................AATGGCACTGGAAGAATTCG......................................................................................................... 20 1 1 1.00 1 0 1
................................................................AATGGCACTAGAAGAATTCACGGG..................................................................................................... 24 1 1 1.00 1 1 0
................................................................AATGGCACTGGAAGAATTCACGTGA.................................................................................................... 25 2 1 1.00 1 1 0
................................................................AATGGCACTGGAAGAATTACGG....................................................................................................... 22 3 1 1.00 1 1 0
................................................................AGTGGCACTGGAAGAATTCA......................................................................................................... 20 1 1 1.00 1 0 1
................................................................AATGCCACTGGAAGAATTCACGGGT.................................................................................................... 25 2 1 1.00 1 1 0
.................................................................ATGGCAGTGGAAGAATTCACGG...................................................................................................... 22 1 1 1.00 1 1 0
................................................................AATGGAACTGGAAGAATTC.......................................................................................................... 19 1 1 1.00 1 1 0
................................................................AATGGCACTGGAAGAATTCCCGTG..................................................................................................... 24 2 1 1.00 1 1 0
................................................................AATGGCACTGGAAGAATTCACTG...................................................................................................... 23 1 1 1.00 1 0 1
................................................................AATTGCACAGGAAGAATTCACG....................................................................................................... 22 2 1 1.00 1 1 0
.............................................................GAGAATGGCACTGGAAGAATTCACGG...................................................................................................... 26 2 1 1.00 1 0 1
................................................................AATGGCACTGTAAGAATTCACGGG..................................................................................................... 24 1 1 1.00 1 1 0
................................................................AATGGCACTGGCAGAATTCAC........................................................................................................ 21 1 1 1.00 1 1 0
................................................................AATGGCACCGGAAGAATTCACGGGT.................................................................................................... 25 2 1 1.00 1 1 0
................................................................AATGACACTGGAAGAATTC.......................................................................................................... 19 1 1 1.00 1 1 0
................................................................AATGGCACTGGAAGAATTCACGCGA.................................................................................................... 25 2 1 1.00 1 1 0
.................................................................ATTGCACTGGAAGAATTCACGGG..................................................................................................... 23 1 1 1.00 1 0 1
................................................................ACTGGCACTGGAAGAATTCACGGT..................................................................................................... 24 2 1 1.00 1 1 0
................................................................AACGGCACTGGAAAAATTCACGGG..................................................................................................... 24 2 1 1.00 1 1 0
................................................................AATGGCACTCGAAGAATACACGGG..................................................................................................... 24 2 1 1.00 1 1 0
................................................................AATGGCACTGGAAGAATTCACGGAA.................................................................................................... 25 2 1 1.00 1 0 1
................................................................AAATGCACTGGAAGAATTCACGG...................................................................................................... 23 2 1 1.00 1 1 0
...............................................................CAACGGCACTGGAAGAATTCACG....................................................................................................... 23 2 1 1.00 1 1 0
................................................................AATGGCACTGGAAGAATTCACGCTTT................................................................................................... 26 3 1 1.00 1 1 0
..............................................................GCAATGGCACTGGAAGAATTCAC........................................................................................................ 23 2 1 1.00 1 0 1
.............................................................AAAAATGGCACTGGAAGAATTCACG....................................................................................................... 25 3 1 1.00 1 0 1
................................................................AATGGCACTGGAACAACTCACGGG..................................................................................................... 24 2 1 1.00 1 1 0
.............................................................CAAAATGGCACTGGAAGAATTCACGG...................................................................................................... 26 3 1 1.00 1 0 1

Anti-sense strand reads

AAAGACGACCCATTCAATAAAAAAAGTTCACTAAAAAGAACAACAAGACGTAGAGCCGTGTCAATTACCGTGACCTTCTTAAGTGCCCCAATAAAATTGTGCGGGCACTAGAGAATCACCGTAGATACCACGCCCTATAATGCACGTCTTTGGCTTTCGAAAAGAGCGAGGCATAAGGTTCGTACGAAG

************************************************.((((((.(((.((..(((.((((((.(((..(((((((((.........)).)))))))))).)))))).)))..)).)))))))))....************************************************* 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droGri2 scaffold_15126:6621320-6621508 - dgr-mir-263a Known_mirbase TTTCTGCTGGG----TAAGTTATTTTTTTCAAGT-------------------GATT-------T------------------TTCTT---------GT--TGT-TCT-GCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTATTTTA--ACAC-GCCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAT-ATTACGTGCAG-AAACC-GAA---------------------------AGCTTTTCTCGCTCCGTATTCCAAGCATGCTTC
droVir3 scaffold_12963:13235071-13235245 + dvi-mir-263a Known_mirbase G--------AACAGGCAAGTTACATCTG---------------------------------C---------------------TTAATGTTGCT-------TGC-TCT-GCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTTTATA--ACAC-GCCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAT-ATTACGTACAA-CAAAT-GAA---------------------------AGCTTCTC----TTCGTATTCTAGACATGCTTC
droMoj3 scaffold_6500:16780708-16780859 + dmo-mir-263a Known_mirbase G-----GTGAG----TAAGTT---------------------------------------------------------------------TGTTTTCGT--TGT-TTC-GCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTTTCTA--ACAC-GCCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAT-ATTACGTTCAA-CAACT-GAA---------------------------AGCTTTTC----GCCTTATTC------------
droWil2 scf2_1100000004521:2657721-2657888 - dwi-mir-263a Known_mirbase CTTCCAGTGGG----TAAGTTGTTTTTT--T---------------------------------T------------------TTTTTGTTGCTTTCGATTGGT-TCT-GCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTTTATTTAACAC-ACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGATTTAAGCATACA-----------GAA-------C-ATCCGACA---TCAA---------------------------------
dp5 4_group3:7322801-7322926 + dps-mir-263a Known_mirbase T---------------------------------------------------------------------------------------------------------CC-ACATCCCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTT-TTTCA--ATACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGACTC----ATCT------------CAATCAATCTCAA-TCGCAA---CCAACGTT----------------------------G
droPer2 scaffold_1:8768294-8768384 + dpe-mir-263a Known_mirbase T---------------------------------------------------------------------------------------------------------CC-ACATCCCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTT-TTTCA--ATACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGA-----------------------------------------------------------------------------------
droAna3 scaffold_12943:2289707-2289800 + dan-mir-263a Known_mirbase T--------------------------------------------------------------------------------------------------------TCT-CCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCT--ATACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAT----------------------------------------------------------------------------------
droBip1 scf7180000396728:1008505-1008598 - T--------------------------------------------------------------------------------------------------------TCT-CCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCT--ATACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAT----------------------------------------------------------------------------------
droKik1 scf7180000301476:605783-605870 + --------------------------------------------------------------------------------------------------------------CATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTATTTCT--AAACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGA-----------------------------------------------------------------------------------
droFic1 scf7180000453936:232064-232181 + C----------------------------------------------------------------------------------------------------------T-CCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCT--ATACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAATAAGACATCAAATCAAATCAAA---------------------------AGCT-----------------------------
droEle1 scf7180000491028:3219023-3219113 + ----------------------------------------------------------------------------------------------------------CT-CCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTC--ATACCACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGA-----------------------------------------------------------------------------------
droRho1 scf7180000779410:469701-469791 - ----------------------------------------------------------------------------------------------------------CT-ACATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCT--ATACCACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGA-----------------------------------------------------------------------------------
droBia1 scf7180000302422:1067971-1068056 + ---------------------------------------------------------------------------------------------------------------ATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTGATTT-T--ATACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGA-----------------------------------------------------------------------------------
droTak1 scf7180000415863:297077-297163 + ---------------------------------------------------------------------------------------------------------------ATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTT--ATACAACCCGTGATCTCTTAGTGGCATTTATGGTGCGGGA-----------------------------------------------------------------------------------
droEug1 scf7180000409122:345822-346015 - CTT-----TGG----AAAGTCATTTTGT--AAGTATATAATAAAATCTAAAGTGAAA-------TCAAAGAAGAAGTTGCAGAATCTT-------GTGAAGTGT-TCAATCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCT--ATACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGATTAAAACATCCAA-AAGTT-GAA---------------------------A--------------------------------
dm3 chr2L:11953371-11953510 - dme-mir-263a Known_mirbase T----------------------------------------------------------------------------------------------------GGTATAT-AGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTT--ATACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACATCCA-----------AAATGAAACGAAATCCGAAACTTTCAAAGTT-----------------------------
droSim2 2l:11624728-11624824 - dsi-mir-263a Known_mirbase T----------------------------------------------------------------------------------------------------GGTATAT-AGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTT--ATACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGA-----------------------------------------------------------------------------------
droSec2 scaffold_16:152703-152831 - dse-mir-263a Known_mirbase TTTAAAGTGACAAAACAAGGAA---------------------------------TACCTTCTA----------------------AT-------------GGTATAT-AGATCTCGACACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTT--ATACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGA-----------------------------------------------------------------------------------
droYak3 2L:8374836-8374922 - dya-mir-263a Known_mirbase ---------------------------------------------------------------------------------------------------------------ATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTACTTTTT--ATACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGA-----------------------------------------------------------------------------------
droEre2 scaffold_4929:13456422-13456537 + der-mir-263a Known_mirbase A--------AG----TAAATA----------------------------------TGCCATCTG----------------------AT-------------GGTGTAT-AGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTACTTTTG--ATACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGA-----------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droGri2
TTTCTGCTGGG----TAAGTTATTTTTTTCAAGT-------------------GATT-------T------------------TTCTT---------GT--TGT-TCT-GCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTATTTTA--ACAC-GCCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAT-ATTACGTGCAG-AAACC-GAA---------------------------AGCTTTTCTCGCTCCGTATTCCAAGCATGCTTCSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.............................................................................................................................AATGGCACTGGAAGAATTCACGGG......................................................................................................................................2417031.00703134693562
.............................................................................................................................AATGGCACTGGAAGAATTCACG........................................................................................................................................2216212.00621227153497
.............................................................................................................................AATGGCACTGGAAGAATTCACGG.......................................................................................................................................2313970.00397023821588
.............................................................................................................................AATGGCACTGGAAGAATTCAC.........................................................................................................................................2113761.00376115042257
.............................................................................................................................AATGGCACTGGAAGAATTCA..........................................................................................................................................2012478.0024787431735
.............................................................................................................................AATGGCACTGGAAGAATTC...........................................................................................................................................191685.00685155530
..............................................................................................................................ATGGCACTGGAAGAATTCACGGG......................................................................................................................................231381.003813765
..............................................................................................................................ATGGCACTGGAAGAATTCACG........................................................................................................................................211298.002982953
..............................................................................................................................ATGGCACTGGAAGAATTCACGG.......................................................................................................................................221248.002482453
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGT.....................................................................................................................................251199.0019982117
..............................................................................................................................ATGGCACTGGAAGAATTCAC.........................................................................................................................................201172.001721693
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGA.....................................................................................................................................251171.001717794
..............................................................................................................................ATGGCACTGGAAGAATTCA..........................................................................................................................................19179.0079781
.............................................................................................................................AATGGCACTGGAAGAATTCACGGT......................................................................................................................................24172.00722745
........................................................................................................................................................................CGTGATCTCTTAGTGGCATCTA.............................................................................................22159.00593524
.............................................................................................................................AATGGCACTGGAAGAATT............................................................................................................................................18157.0057507
.............................................................................................................................AATGGCACTGGAAGAATTCACT........................................................................................................................................22140.00401228
.............................................................................................................................AATGGCACTGGAAGAATTCACGT.......................................................................................................................................23138.00381523
...............................................................................................................................TGGCACTGGAAGAATTCACGGG......................................................................................................................................22133.0033330
.............................................................................................................................AATGGCACTGGAAGAATTCACA........................................................................................................................................22124.0024915
.............................................................................................................................AATGGCACTGGAAGAATTCACGA.......................................................................................................................................23118.0018711
...............................................................................................................................TGGCACTGGAAGAATTCACG........................................................................................................................................20117.0017170
...............................................................................................................................TGGCACTGGAAGAATTCACGG.......................................................................................................................................21115.0015150
..............................................................................................................................ATGGCACTGGAAGAATTCACGGGA.....................................................................................................................................24114.0014140
.............................................................................................................................AATGGCACTGGAAGAATTCACGC.......................................................................................................................................23114.0014212
..............................................................................................................................ATGGCACTGGAAGAATTC...........................................................................................................................................18113.0013130
...............................................................................................................................TGGCACTGGAAGAATTCAC.........................................................................................................................................19113.0013130
..............................................................................................................................ATGGCACTGGAAGAATTCACGGGT.....................................................................................................................................24112.0012111
........................................................................................................................................................................CGTGATCTCTTAGTGGCATCT..............................................................................................21110.001046
.............................................................................................................................AATGGCACTGGAAGAATTCAA.........................................................................................................................................2119.00936
.............................................................................................................................AATGGCACTGGAAGAATTCACGGC......................................................................................................................................2419.00945
.............................................................................................................................AATGGCACTGGAAGAATTCACGGA......................................................................................................................................2418.00835
.............................................................................................................................AATGGCACTGGAAGAATTCACC........................................................................................................................................2218.00835
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGC.....................................................................................................................................2518.00835
.............................................................................................................................AATGGCACTGGAAGAATTCACGGTT.....................................................................................................................................2518.00817
................................................................................................................................GGCACTGGAAGAATTCACGGG......................................................................................................................................2117.00770
............................................................................................................................TAATGGCACTGGAAGAATTCACG........................................................................................................................................2316.00660
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGAA....................................................................................................................................2615.00550
............................................................................................................................TAATGGCACTGGAAGAATTCACGGG......................................................................................................................................2514.00440
..............................................................................................................................ATGGCACTGGAAGAATTCACGGT......................................................................................................................................2314.00440
.............................................................................................................................AATGGCACTGGAAGAATTT...........................................................................................................................................1914.00413
...............................................................................................................................TGGCACTGGAAGAATTCA..........................................................................................................................................1814.00440
................................................................................................................................GGCACTGGAAGAATTCAC.........................................................................................................................................1813.00321
.................................................................................................................................GCACTGGAAGAATTCACG........................................................................................................................................1813.00330
................................................................................................................................GGCACTGGAAGAATTCACG........................................................................................................................................1912.00220
.............................................................................................................................AATGGCACTGGAAGAATTCT..........................................................................................................................................2012.00220
.............................................................................................................................AATGGCACTGGAAGAATTCACGATT.....................................................................................................................................2512.00220
.................................................................................................................................GCACTGGAAGAATTCACGGG......................................................................................................................................2012.00220
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGG.....................................................................................................................................2512.00220
.........................................................................................................................................................................GTGATCTCTTAGTGGCATCTA.............................................................................................2112.00220
.........................................................................................................................................................................GTGATCTCTTAGTGGCATCT..............................................................................................2012.00220
.............................................................................................................................AATGGCACTGGAAGAATTCAT.........................................................................................................................................2112.00211
................................................................................................................................GGCACTGGAAGAATTCACGG.......................................................................................................................................2012.00220
.............................................................................................................................AATGGCACTGGAAGAATTCACGGCA.....................................................................................................................................2511.00110
............................................................................................................................TAATGGCACTGGAAGAATT............................................................................................................................................1911.00110
................................................................................................................................GGCACTGGAAGAATTCACGGGT.....................................................................................................................................2211.00110
............................................................................................................................TAATGGCACTGGAAGAATTCACGGGT.....................................................................................................................................2611.00110
.............................................................................................................................AATGGCACTGGAAGAATTCG..........................................................................................................................................2011.00110
.............................................................................................................................AATGGCACTGGAAGAATTCACGGAA.....................................................................................................................................2511.00110
droVir3
G--------AACAGGCAAGTTACATCTG---------------------------------C---------------------TTAATGTTGCT-------TGC-TCT-GCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTTTATA--ACAC-GCCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAT-ATTACGTACAA-CAAAT-GAA---------------------------AGCTTCTC----TTCGTATTCTAGACATGCTTCSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.............................................................................................................................AATGGCACTGGAAGAATTCACGGG......................................................................................................................................2412122360.00212236013507853673524133831548195884543774859116916035771451266368417415694939234639858996261582765856758981202240216627142002183890162718624114253120595555365560206446496746199174613242533373166948242534983216447516040321127541629566481378014236366856944310531506187326970223951917903516100224755621841865317973126021147914494
.............................................................................................................................AATGGCACTGGAAGAATTCACGG.......................................................................................................................................231641016.0064101649102210772916485812027384020334743533978073516659936120453319185252457926272272930301837606897432463451482043041260722817914293739256535071373184169969499919447282215149421644126067485076202891140357642314202026324482600110913014245792847372441963029356984494811856439494158726741
.............................................................................................................................AATGGCACTGGAAGAATTCACG........................................................................................................................................221223175.0022317547022399175376582135370523251332158229097411332543262508155041943002205821803065543929602231209644832930428788742744747713691516193030221236651628251244919203266506846421330194638224368444394348316482039364469294761665596323433592327305137509426715843
.............................................................................................................................AATGGCACTGGAAGAATTCAC.........................................................................................................................................21171545.007154511307946503272429103710006709861498479851322541215796171213846578341441160784576161816761027100819905761926717693312974710590960021646152013201447554291151383078157536229969682113721627148711998992068154838197178222267
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGA.....................................................................................................................................25168839.0068839686545721092859411154280109109260914092266921218323610213442877118199426238253646222574224503747299277290111513174010617426516225622245135523762812703752794521591561752194667166118488938807166642716922706656738
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGT.....................................................................................................................................25146371.004637112494251627771534061017313051046162211356833211741725641648430787272170266669347902175562217520825020311827682420205121317224387658163251188117953910861976531122262155251282673237020271429325524057611438463570
.............................................................................................................................AATGGCACTGGAAGAATTCA..........................................................................................................................................20130153.0030153209169379719102395224547208457105040100457730871580036921772482623718815734916029473922854515731141161351110000021191028413127742302528951536562013104073512222493282341139119
........................................................................................................................................................................CGTGATCTCTTAGTGGCATCTA.............................................................................................22112501.00125015747136100430218107501410200039281828256231133215659608275653533391411210369104000101048181023371829205536934215403976000162119399419351733121311001
.............................................................................................................................AATGGCACTGGAAGAATTC...........................................................................................................................................1919346.0093461358128671211320762297114313943611128934380136587214714346171431828852661011920003973000000000000000322314697251326660101523275372205103
..............................................................................................................................ATGGCACTGGAAGAATTCACGGG......................................................................................................................................2316899.0068991516153896711279141160008531038145151261228232229134101600006700000000111121254111461111717641202084718477946121051214
.............................................................................................................................AATGGCACTGGAAGAATTCACGGT......................................................................................................................................2415069.0050691035934710812691751311289010109752889478266801552621326134972645320601690000315901210000011402013129117631691253422928245676458409458149575765
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGAA....................................................................................................................................2614412.0044126265044425122110000028176713171932251517616551134150000133251001135591510218222021340945491129133922129419610629228512220165150187
..............................................................................................................................ATGGCACTGGAAGAATTCACGG.......................................................................................................................................2213333.0033336526288914320479900010001062114543741131201700002400000010000000052810667140200199201921802238
.............................................................................................................................AATGGCACTGGAAGAATTCACGT.......................................................................................................................................2312889.00288950412373263110241043703049343172553852441101891226531116256601670000163601000100001211231381461258741141510104582231412246243543
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGG.....................................................................................................................................2512677.002677111462825280317082000100111208103042325030000022020000003812312120759404681176212010578823910310409374
.................................................................................................................................GCACTGGAAGAATTCACGGG......................................................................................................................................2012638.0026382225144121191213113000420322332416526541537025000011100000000010000016602013110414442032025121128451326101225
.............................................................................................................................AATGGCACTGGAAGAATTCACC........................................................................................................................................2212477.002477348733102319101080000213592163431020471733037427602070000617601100000000100010242362380014381206113141118913
.............................................................................................................................AATGGCACTGGAAGAATTCACGGA......................................................................................................................................2412163.00216325677103411211419719910024181030202621214915136351218501142019110011910100000023215364551783730899710958881785110382034373947
..............................................................................................................................ATGGCACTGGAAGAATTCACG........................................................................................................................................2111999.00199951186111333000000100610322120425325040000520000000000000000000055230000001152001100
........................................................................................................................................................................CGTGATCTCTTAGTGGCATCT..............................................................................................2111688.0016881217356403924000130001245622276829942424142182101710004631000002002452052020599150030001891679310019716100002
.............................................................................................................................AATGGCACTGGAAGAATTCACGGC......................................................................................................................................2411366.001366292100172811057981360007741219268201212815129154160280000518000001000023112102721221864383231481512171125248
.............................................................................................................................AATGGCACTGGAAGAATT............................................................................................................................................1811144.00114415912436264091829801138158212317182542231361604297240300000810112000221252084109924615736135857224291011382603169
.............................................................................................................................AATGGCACTGGAAGAATTCACT........................................................................................................................................2211049.0010492679212937217101013689151012202231241611470260000450000000000000000191165575040020112115010562
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGC.....................................................................................................................................2511032.0010321095836191512915321523000121176961331703828111110428070000290010000001110404120656149411213211121251215608622
.............................................................................................................................AATGGCACTGGAAGAATTCACA........................................................................................................................................221872.0087268881130403100016187231716216284457461151019000029000000100020020111131673290841820232026621061317
..............................................................................................................................ATGGCACTGGAAGAATTCAC.........................................................................................................................................201774.0077400705002000100002102125010011005220100000100000000000000000000014240000001000000000
.............................................................................................................................AATGGCACTGGAAGAATTCACGA.......................................................................................................................................231737.0073730265892834471010141021461041229232527181122500115300000100000001130123013104933252861110124156539254134
..................................................................................................................................CACTGGAAGAATTCACGGG......................................................................................................................................191731.007313214122142134000021000010001104147210400003201000101361324363112110053101110210858678910500123
.................................................................................................................................GCACTGGAAGAATTCACGG.......................................................................................................................................191718.00718841920138661115140000100002404331213331018000051300000000000000054000120042228565473769890331016
.............................................................................................................................AATGGCACTGGAAGAATTCACGGTT.....................................................................................................................................251583.0058313732502071150000147320598152921140516719020000029000000000010000209002121903720025438101674
...............................................................................................................................TGGCACTGGAAGAATTCACGGG......................................................................................................................................221530.0053014330682013310000011000123023235655030000110000000000001001150121762000108146410402411
................................................................................................................................GGCACTGGAAGAATTCACGGG......................................................................................................................................211477.004771646631216145510500173223119477621263186120190100812000000000000000000001857331001320614111900301
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGAAA...................................................................................................................................271459.00459231613000000000032012200101010151101001000101100000011211111610017000373484107148196434847
...................................................................................................................................ACTGGAAGAATTCACGGG......................................................................................................................................181430.00430132733118463300022311019249137525310151000370000000000100010104202206511030572129384910110
..............................................................................................................................ATGGCACTGGAAGAATTCA..........................................................................................................................................191398.00398003810000000000000010000000000010000000001000000000000000000001830000000002000000
.............................................................................................................................AATGGCACTGGAAGAATTCACGC.......................................................................................................................................231368.0036869205352703172000311231811174222120130900006600000001000000001251248201120010102101231
.............................................................................................................................AATGGCACTGGAAGAATTCACGGAA.....................................................................................................................................251365.0036547464202000100002012151270202114020000010100100000000100030320031201217173211519141222086136
................................................................................................................................GGCACTGGAAGAATTCACGG.......................................................................................................................................201336.00336714523361428158000030000270974107321851202600001124000000000000000010000480100024110300002
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGTC....................................................................................................................................261333.003331335811730080000000102160101120274225740210000090000000000010000050012871102023002000000
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGTA....................................................................................................................................261322.003224275312010100006106132040214129311030000000010000001101315211703270112303316195172003477
........................................................................................................................................................................CGTGATCTCTTAGTGGCATC...............................................................................................201284.0028424331311000000010000220020000001001000010010000001146334111710000000037491943392600000
.............................................................................................................................AATGGCACTGGAAGAATTCAA.........................................................................................................................................211267.0026716122400413120000107319699821220310101200205100000000010002010020195100033412002422443
..................................................................................................................................CACTGGAAGAATTCACGG.......................................................................................................................................181258.002582813300422431000000000110112020150301500007700000000000011184101100000000011261411202001112
...............................................................................................................................TGGCACTGGAAGAATTCACGG.......................................................................................................................................211247.0024702176201102210000000000022201043010300000000000000001000012100000240001040010004111
..............................................................................................................................ATGGCACTGGAAGAATTCACGGGT.....................................................................................................................................241242.002424117620000040000011201010011001112010000010000000000000001120012070010020202001000
....................................................................................................................................CTGGAAGAATTCACGGG......................................................................................................................................171211.00211000000000000000000000000000000000000000010000001121083117767450203400102000000014132016
................................................................................................................................GGCACTGGAAGAATTCACG........................................................................................................................................191188.0018800190101414314200068630111433224113170360000211000000000000000000001310000000000000100
.............................................................................................................................AATGGCACTGGAAGAATTT...........................................................................................................................................191180.001805430004032500002201110110000011110100001000000000000000000100228900000000000000000
.............................................................................................................................AATGGCACTGGAAGAATTCACGTT......................................................................................................................................241168.00168211000222111000410531524000000511060000110000000000000110020388400011101000020001
..............................................................................................................................ATGGCACTGGAAGAATTCACGGGA.....................................................................................................................................241163.001631351070000000000000010001100000002201000020000000000000000003002420020013234100001
.............................................................................................................................AATGGCACTGGAAGAAT.............................................................................................................................................171162.001620000000000000000000000000000000000000000010000111114276984818040972101100000001316
.................................................................................................................................GCACTGGAAGAATTCACG........................................................................................................................................181146.0014670131313130100001010214039001003010700002400000000000000020000010021021581048810012
.............................................................................................................................AATGGCACTGGAAGAATTCACGGTC.....................................................................................................................................251144.001441121060008000020100013020000091310260120000040000000000000000010212206000000000000100
...............................................................................................................................TGGCACTGGAAGAATTCACG........................................................................................................................................201142.00142001150002010000001000000010011262003000000000000000000000000000210000000013000000
............................................................................................................................TAATGGCACTGGAAGAATTCACGGG......................................................................................................................................251121.0012130611000101000000010000000000000000000001000000010143022010410210000045425601201
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGTCG...................................................................................................................................271120.00120100000000000000000000000000000000000000000000000000000000000000000001324198243100000
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGTAA...................................................................................................................................271119.0011971320000000000011001001200000014200000000000000000001000208102300012180042010077106
.............................................................................................................................AATGGCACTGGAAGAATTCAT.........................................................................................................................................211114.001141113410011400001714118211000101210100001400000000000100000010122900100011201000001
............................................................................................................................TAATGGCACTGGAAGAATTCACGG.......................................................................................................................................241114.00114213620001000000000000001000010122000000100200000000020002110034000000885514701010
........................................................................................................................................................................CGTGATCTCTTAGTGGCATCTAA............................................................................................231109.0010900105070000000000100100010200000000000410000000000100000000000000000181985152000000
.............................................................................................................................AATGGCACTGGAAGAATTCT..........................................................................................................................................20188.00880013000020100000011200010001001000100000000000000000000000100135000000000000000000
.............................................................................................................................AATGGCACTGGAAGAATTCACAA.......................................................................................................................................23188.008801300000000000012101011000001100000000000000000000000000010001300079200000016101214
.............................................................................................................................AATGGCACTGGAAGAATTCACGGAAA....................................................................................................................................26187.008710110000010000000100101000101000000010000000000000000000060001000143100102012071011
....................................................................................................................................CTGGAAGAATTCACGG.......................................................................................................................................16187.00870000000000000000000000000000000000000000000000000012110962726000140000000000000000
........................................................................................................................................................................CGTGATCTCTTAGTGGCATCTC.............................................................................................22180.00800002912190000000010200702600000000010000106000000000000000000020000000010000000000
..............................................................................................................................ATGGCACTGGAAGAATTC...........................................................................................................................................18179.007903700000001000000000100000000000000000000000000000000000000001300000000000000000
.............................................................................................................................AATGGCACTGGAAGAATTCACGGTA.....................................................................................................................................25176.007631411100020000202224001000100421030000100000000000000000021061800104000000001212
.............................................................................................................................AATGGCACTGGAAGAATTCACGGTAA....................................................................................................................................26168.0068101000000000000100010030101000010001000001000000000000000100040005102020001141817
droMoj3
G-----GTGAG----TAAGTT---------------------------------------------------------------------TGTTTTCGT--TGT-TTC-GCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTTTCTA--ACAC-GCCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAT-ATTACGTTCAA-CAACT-GAA---------------------------AGCTTTTC----GCCTTATTC------------SizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.............................................................................................................................AATGGCACTGGAAGAATTCACGGG......................................................................................................................................241530178.0053017842871207333894799937792876753
.............................................................................................................................AATGGCACTGGAAGAATTCACGG.......................................................................................................................................23174673.00746731398593186022183404922630
.............................................................................................................................AATGGCACTGGAAGAATTCAC.........................................................................................................................................21155655.00556551124777535077838469927589
.............................................................................................................................AATGGCACTGGAAGAATTCA..........................................................................................................................................20126297.002629754281112522556710812561
.............................................................................................................................AATGGCACTGGAAGAATTCACG........................................................................................................................................22121215.0021215497019310912224231810419
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGT.....................................................................................................................................25111691.001169193623721247433376495
.............................................................................................................................AATGGCACTGGAAGAATTC...........................................................................................................................................1916983.0069836728723161373960
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGA.....................................................................................................................................2516412.00641272810413030326902457
..............................................................................................................................ATGGCACTGGAAGAATTCACGGG......................................................................................................................................2315846.00584643851449137460
........................................................................................................................................................................CGTGATCTCTTAGTGGCATCTA.............................................................................................2214638.004638992971615412784
.............................................................................................................................AATGGCACTGGAAGAATTCACGGC......................................................................................................................................2412368.002368172217332166113
.............................................................................................................................AATGGCACTGGAAGAATTCACC........................................................................................................................................2211663.001663180146105111320
..............................................................................................................................ATGGCACTGGAAGAATTCACGG.......................................................................................................................................2211543.001543141600310222
.............................................................................................................................AATGGCACTGGAAGAATTCACGGT......................................................................................................................................2411467.001467122184576687519
..............................................................................................................................ATGGCACTGGAAGAATTCAC.........................................................................................................................................2011283.00128312440241320
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGC.....................................................................................................................................2511092.001092301861693389
..............................................................................................................................ATGGCACTGGAAGAATTCA..........................................................................................................................................191583.0058356902408
..............................................................................................................................ATGGCACTGGAAGAATTCACG........................................................................................................................................211569.00569550003610
.............................................................................................................................AATGGCACTGGAAGAATTCACGGA......................................................................................................................................241480.00480376819266144
........................................................................................................................................................................CGTGATCTCTTAGTGGCATCT..............................................................................................211434.0043419561733516
...............................................................................................................................TGGCACTGGAAGAATTCACGGG......................................................................................................................................221359.003592551018616
.............................................................................................................................AATGGCACTGGAAGAATTCACA........................................................................................................................................221355.00355750314811190
.............................................................................................................................AATGGCACTGGAAGAATTCACGT.......................................................................................................................................231346.00346340522150135
.............................................................................................................................AATGGCACTGGAAGAATTCACT........................................................................................................................................221343.0034333222419236
.............................................................................................................................AATGGCACTGGAAGAATT............................................................................................................................................181317.00317552611432036
.............................................................................................................................AATGGCACTGGAAGAATTCACGC.......................................................................................................................................231184.00184513612445
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGG.....................................................................................................................................251183.001831014513726
.............................................................................................................................AATGGCACTGGAAGAATTCACGAC......................................................................................................................................241156.0015600001560
................................................................................................................................GGCACTGGAAGAATTCACGGG......................................................................................................................................211139.001396011124520
.............................................................................................................................AATGGCACTGGAAGAATTCT..........................................................................................................................................201136.001361701833068
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGAA....................................................................................................................................261135.00135411264243
.............................................................................................................................AATGGCACTGGAAGAATTCAA.........................................................................................................................................211127.001273741642325
.............................................................................................................................AATGGCACTGGAAGAATTT...........................................................................................................................................191122.001221301332064
.............................................................................................................................AATGGCACTGGAAGAATTCACGGTT.....................................................................................................................................251118.0011880672869
..............................................................................................................................ATGGCACTGGAAGAATTCACGGGT.....................................................................................................................................241116.0011696000812
.............................................................................................................................AATGGCACTGGAAGAATTCAT.........................................................................................................................................211109.0010914220401122
.............................................................................................................................AATGGCACTGGAAGAATTCACGA.......................................................................................................................................23197.0097320252632
...............................................................................................................................TGGCACTGGAAGAATTCACGG.......................................................................................................................................21191.00918100082
...............................................................................................................................TGGCACTGGAAGAATTCAC.........................................................................................................................................19178.00787400031
..............................................................................................................................ATGGCACTGGAAGAATTC...........................................................................................................................................18176.00767102003
..............................................................................................................................ATGGCACTGGAAGAATTCACGGGA.....................................................................................................................................24171.00716600122
.................................................................................................................................GCACTGGAAGAATTCACGGG......................................................................................................................................20170.0070402111313
........................................................................................................................................................................CGTGATCTCTTAGTGGCATC...............................................................................................20169.00690001671
............................................................................................................................TAATGGCACTGGAAGAATTCACGGG......................................................................................................................................25168.006838000291
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGTA....................................................................................................................................26164.006450212531
........................................................................................................................................................................CGTGATCTCTTAGTGGCATCC..............................................................................................21154.00540000540
...............................................................................................................................TGGCACTGGAAGAATTCA..........................................................................................................................................18147.00474500101
...................................................................................................................................ACTGGAAGAATTCACGGG......................................................................................................................................18146.004627400105
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGTC....................................................................................................................................26143.004300001924
.............................................................................................................................AATGGCACTGGAAGAATTCC..........................................................................................................................................20137.003700221104
.............................................................................................................................AATGGCACTGGAAGAATTCACCC.......................................................................................................................................23137.00377022125
.............................................................................................................................AATGGCACTGGAAGAATTCAG.........................................................................................................................................21133.00331023261
.............................................................................................................................AATGGCACTGGAAGAATTCACGTT......................................................................................................................................24129.002911121311
.............................................................................................................................AATGGCACTGGAAGAATTCACGGTA.....................................................................................................................................25128.00282012716
................................................................................................................................GGCACTGGAAGAATTCAC.........................................................................................................................................18128.00281811125
...............................................................................................................................TGGCACTGGAAGAATTCACG........................................................................................................................................20128.00282500012
............................................................................................................................TAATGGCACTGGAAGAATTCACGG.......................................................................................................................................24127.00272200050
droWil2
CTTCCAGTGGG----TAAGTTGTTTTTT--T---------------------------------T------------------TTTTTGTTGCTTTCGATTGGT-TCT-GCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTTTTATTTAACAC-ACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGATTTAAGCATACA-----------GAA-------C-ATCCGACA---TCAA---------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.............................................................................................................................AATGGCACTGGAAGAATTCACGGG......................................................................................................................................241397204.0039720472410211263286921780052999
.............................................................................................................................AATGGCACTGGAAGAATTCAC.........................................................................................................................................211154925.00154925539546071543313244116246
.............................................................................................................................AATGGCACTGGAAGAATTCACGG.......................................................................................................................................231113580.001135802690111187245271776833197
.............................................................................................................................AATGGCACTGGAAGAATTCACG........................................................................................................................................22168554.00685545333604320012665130515
.............................................................................................................................AATGGCACTGGAAGAATTCA..........................................................................................................................................20140095.004009562323706635127029197
.............................................................................................................................AATGGCACTGGAAGAATTC...........................................................................................................................................19123596.0023596332323814569518484
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGT.....................................................................................................................................25115066.0015066621887563624955427
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGA.....................................................................................................................................2518509.008509436236293618311018
..............................................................................................................................ATGGCACTGGAAGAATTCACGGG......................................................................................................................................2312440.0024406520553322067
.............................................................................................................................AATGGCACTGGAAGAATTCACGGT......................................................................................................................................2411826.00182647134574479592
.............................................................................................................................AATGGCACTGGAAGAATTCACT........................................................................................................................................2211752.0017524432269291378
........................................................................................................................................................................CGTGATCTCTTAGTGGCATCTA.............................................................................................2211667.0016674264033109969
.............................................................................................................................AATGGCACTGGAAGAATTCACA........................................................................................................................................2211476.0014765958236911032
..............................................................................................................................ATGGCACTGGAAGAATTCACGG.......................................................................................................................................2211270.001270281155251349
.............................................................................................................................AATGGCACTGGAAGAATTCACGT.......................................................................................................................................2311170.001170427733553663
..............................................................................................................................ATGGCACTGGAAGAATTCACG........................................................................................................................................211667.00667459922834
..............................................................................................................................ATGGCACTGGAAGAATTCAC.........................................................................................................................................201637.0063734661617135
.............................................................................................................................AATGGCACTGGAAGAATTCACGGC......................................................................................................................................241618.0061810814104282110
.............................................................................................................................AATGGCACTGGAAGAATTCAA.........................................................................................................................................211591.005911871912535
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGG.....................................................................................................................................251583.0058349210242235
.............................................................................................................................AATGGCACTGGAAGAATTCACGGA......................................................................................................................................241500.00500662175151187
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGAA....................................................................................................................................261486.004864351012209
.............................................................................................................................AATGGCACTGGAAGAATTCACC........................................................................................................................................221474.0047414124811389
.............................................................................................................................AATGGCACTGGAAGAATT............................................................................................................................................181420.0042021322811328
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGC.....................................................................................................................................251317.0031763174410093
..............................................................................................................................ATGGCACTGGAAGAATTCA..........................................................................................................................................191306.0030602576241
.............................................................................................................................AATGGCACTGGAAGAATTT...........................................................................................................................................191300.0030055241265
........................................................................................................................................................................CGTGATCTCTTAGTGGCATCT..............................................................................................211238.00238529715317
.............................................................................................................................AATGGCACTGGAAGAATTCACGGTT.....................................................................................................................................251237.00237814154754
.............................................................................................................................AATGGCACTGGAAGAATTCACGA.......................................................................................................................................231196.001961817469106
...............................................................................................................................TGGCACTGGAAGAATTCACGGG......................................................................................................................................221183.00183913914912
.............................................................................................................................AATGGCACTGGAAGAATTCC..........................................................................................................................................201180.001802063169
.............................................................................................................................AATGGCACTGGAAGAATTCAT.........................................................................................................................................211156.0015635146128
.................................................................................................................................GCACTGGAAGAATTCACGGG......................................................................................................................................201135.001359424674
.............................................................................................................................AATGGCACTGGAAGAATTCACGC.......................................................................................................................................231132.00132291471738
.............................................................................................................................AATGGCACTGGAAGAATTCACGTT......................................................................................................................................241117.001171749159
.............................................................................................................................AATGGCACTGGAAGAATTCT..........................................................................................................................................201116.001160417095
..............................................................................................................................ATGGCACTGGAAGAATTCACGGGT.....................................................................................................................................241103.00103093325
...............................................................................................................................TGGCACTGGAAGAATTCACGG.......................................................................................................................................21176.00761631002
.............................................................................................................................AATGGCACTGGAAGAATTA...........................................................................................................................................19174.0074012071
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGTA....................................................................................................................................26167.00672172469
...............................................................................................................................TGGCACTGGAAGAATTCAC.........................................................................................................................................19158.0058043519
................................................................................................................................GGCACTGGAAGAATTCACGGG......................................................................................................................................21156.00563331055
...............................................................................................................................TGGCACTGGAAGAATTCACG........................................................................................................................................20152.0052044305
.............................................................................................................................AATGGCACTGGAAGAATTCG..........................................................................................................................................20147.0047426134
.............................................................................................................................AATGGCACTGGAAGAATTCACTT.......................................................................................................................................23142.0042113037
..............................................................................................................................ATGGCACTGGAAGAATTC...........................................................................................................................................18139.00391190019
................................................................................................................................GGCACTGGAAGAATTCACG........................................................................................................................................19138.0038120917
..............................................................................................................................ATGGCACTGGAAGAATTCACGGGA.....................................................................................................................................24138.0038132113
.................................................................................................................................GCACTGGAAGAATTCACGG.......................................................................................................................................19136.0036175905
dp5
T---------------------------------------------------------------------------------------------------------CC-ACATCCCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTT-TTTCA--ATACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGACTC----ATCT------------CAATCAATCTCAA-TCGCAA---CCAACGTT----------------------------GSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.............................................................................................................................AATGGCACTGGAAGAATTCACGGG......................................................................................................................................2412199034.00219903429838590275028271014926324831805322556833128826748
.............................................................................................................................AATGGCACTGGAAGAATTCACGG.......................................................................................................................................231647694.00647694124646411166721780157814231554179384327766155893
.............................................................................................................................AATGGCACTGGAAGAATTCACG........................................................................................................................................221221248.002212481963532220496941322382412772490298177334267
.............................................................................................................................AATGGCACTGGAAGAATTCAC.........................................................................................................................................211195255.00195255105264812543164314633596157232248110338517835
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGT.....................................................................................................................................25152873.0052873654431189625638024959325932272556477
.............................................................................................................................AATGGCACTGGAAGAATTCA..........................................................................................................................................20141774.0041774201791049832182480725187511978910
..............................................................................................................................ATGGCACTGGAAGAATTCACGGG......................................................................................................................................23115063.001506314868211017221283114523762602
.............................................................................................................................AATGGCACTGGAAGAATTCACGGT......................................................................................................................................24113679.00136791861238613975814165579871948
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGA.....................................................................................................................................2518465.008465128124058686725552155827802439
.............................................................................................................................AATGGCACTGGAAGAATTC...........................................................................................................................................1917576.00757611522932531345212022062886354
..............................................................................................................................ATGGCACTGGAAGAATTCACGG.......................................................................................................................................2216420.006420747072571447216903503
..............................................................................................................................ATGGCACTGGAAGAATTCACG........................................................................................................................................2114216.00421603725120103012822199
..............................................................................................................................ATGGCACTGGAAGAATTCAC.........................................................................................................................................2013203.003203028604514214122047
.............................................................................................................................AATGGCACTGGAAGAATTCACGT.......................................................................................................................................2312324.00232445747064983541330544105
..............................................................................................................................ATGGCACTGGAAGAATTCA..........................................................................................................................................1911832.00183201787100561311
.............................................................................................................................AATGGCACTGGAAGAATTCACGGC......................................................................................................................................2411741.0017412378975421123173279335
.............................................................................................................................AATGGCACTGGAAGAATTCACGGA......................................................................................................................................2411278.001278276130124651161542294
.............................................................................................................................AATGGCACTGGAAGAATTCACT........................................................................................................................................2211178.00117811098164191223684122
.............................................................................................................................AATGGCACTGGAAGAATTCACGGTT.....................................................................................................................................2511116.00111607646082465165372
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGC.....................................................................................................................................251950.00950559479831453010513139
........................................................................................................................................................................CGTGATCTCTTAGTGGCATCTA.............................................................................................221890.00890614539216266142010912
.............................................................................................................................AATGGCACTGGAAGAATTCACA........................................................................................................................................221812.00812025214284731593421236
..............................................................................................................................ATGGCACTGGAAGAATTCACGGGT.....................................................................................................................................241650.006501465500221349428
...............................................................................................................................TGGCACTGGAAGAATTCACGGG......................................................................................................................................221635.0063505507010982238
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGTAA-..................................................................................................................................271534.005340100001125182
.............................................................................................................................AATGGCACTGGAAGAATTCACGA.......................................................................................................................................231403.00403012316627215411856
.............................................................................................................................AATGGCACTGGAAGAATTCAA.........................................................................................................................................211385.003850123111129421414519
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGG.....................................................................................................................................251384.0038433541782125417745
...............................................................................................................................TGGCACTGGAAGAATTCACGG.......................................................................................................................................211313.00313029032000585
.............................................................................................................................AATGGCACTGGAAGAATT............................................................................................................................................181293.0029321165021923248517
...............................................................................................................................TGGCACTGGAAGAATTCACG........................................................................................................................................201257.00257024500003261
..............................................................................................................................ATGGCACTGGAAGAATTC...........................................................................................................................................181230.00230021900004142
.............................................................................................................................AATGGCACTGGAAGAATTT...........................................................................................................................................191210.002101128000967032
...............................................................................................................................TGGCACTGGAAGAATTCAC.........................................................................................................................................191190.00190018800001010
.................................................................................................................................GCACTGGAAGAATTCACGGG......................................................................................................................................201176.0017644910003254252
.............................................................................................................................AATGGCACTGGAAGAATTCACGC.......................................................................................................................................231168.00168128721152041512
........................................................................................................................................................................CGTGATCTCTTAGTGGCATCT..............................................................................................211168.0016836135046513401
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGTA....................................................................................................................................261168.0016801214009338326
..............................................................................................................................ATGGCACTGGAAGAATTCACGGGA.....................................................................................................................................241150.00150213110001456
...............................................................................................................................TGGCACTGGAAGAATTCA..........................................................................................................................................181138.00138013700000010
..............................................................................................................................ATGGCACTGGAAGAATTCACGGT......................................................................................................................................231133.00133095000058196
................................................................................................................................GGCACTGGAAGAATTCACGGG......................................................................................................................................211107.0010709020505041
.............................................................................................................................AATGGCACTGGAAGAATTCACGTT......................................................................................................................................241107.0010701922055211133
.............................................................................................................................AATGGCACTGGAAGAATTCAT.........................................................................................................................................211106.001060129354156457
.............................................................................................................................AATGGCACTGGAAGAATTCACC........................................................................................................................................221105.0010501925737194174
............................................................................................................................TAATGGCACTGGAAGAATTCACGGG......................................................................................................................................25198.009807350100397
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGAA....................................................................................................................................26189.00897381401039116
.............................................................................................................................AATGGCACTGGAAGAATTCACGAC......................................................................................................................................24186.008600793000400
................................................................................................................................GGCACTGGAAGAATTCACGG.......................................................................................................................................20178.007817500002000
.............................................................................................................................AATGGCACTGGAAGAATTCT..........................................................................................................................................20173.0073038000919070
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGGT....................................................................................................................................26167.0067071001737410
..............................................................................................................................ATGGCACTGGAAGAATTCACGT.......................................................................................................................................22165.006505901012020
.............................................................................................................................AATGGCACTGGAAGAATTCACGGTA.....................................................................................................................................25164.0064051100911334
.................................................................................................................................GCACTGGAAGAATTCACGG.......................................................................................................................................19162.00621270000032011
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGTC....................................................................................................................................26160.0060025210228200
................................................................................................................................GGCACTGGAAGAATTCACG........................................................................................................................................19150.005004400114000
............................................................................................................................TAATGGCACTGGAAGAATTCACGG.......................................................................................................................................24143.004303101000560
.............................................................................................................................AATGGCACTGGAAGAATTCACGGAT.....................................................................................................................................25143.004300000044296
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGCC....................................................................................................................................26139.0039000000024150
.............................................................................................................................AATGGCACTGGAAGAATTCACGGTAA....................................................................................................................................26139.003900100010370
.............................................................................................................................AATGGCACTGGAAGAAT.............................................................................................................................................17137.003700000008218
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGTG....................................................................................................................................26137.003700100003060
...............................................................................................................................TGGCACTGGAAGAATTCACGGGT.....................................................................................................................................23137.003703010002040
................................................................................................................................GGCACTGGAAGAATTCAC.........................................................................................................................................18135.003503101102000
.............................................................................................................................AATGGCACTGGAAGAATTCACGGAA.....................................................................................................................................25133.003325210118103
droPer2
T---------------------------------------------------------------------------------------------------------CC-ACATCCCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTT-TTTCA--ATACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGA-----------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.............................................................................................................................AATGGCACTGGAAGAATTCACGGG......................................................................................................................................24166268.006626835125933822851883691510722
.............................................................................................................................AATGGCACTGGAAGAATTCAC.........................................................................................................................................21124570.002457032019581624308147603062
.............................................................................................................................AATGGCACTGGAAGAATTCACGG.......................................................................................................................................23121305.00213055813471530486438705739
.............................................................................................................................AATGGCACTGGAAGAATTCACG........................................................................................................................................22119534.00195346064055349293889322654
.............................................................................................................................AATGGCACTGGAAGAATTCA..........................................................................................................................................20112871.00128712488673247679331479
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGT.....................................................................................................................................2513199.003199158444611127101714
.............................................................................................................................AATGGCACTGGAAGAATTC...........................................................................................................................................1912585.002585278584031647415
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGA.....................................................................................................................................2511525.0015259521113343173213
..............................................................................................................................ATGGCACTGGAAGAATTCACGGG......................................................................................................................................2311136.001136721005192425
.............................................................................................................................AATGGCACTGGAAGAATTCACGGT......................................................................................................................................241607.00607793553202247
..............................................................................................................................ATGGCACTGGAAGAATTCACGG.......................................................................................................................................221554.005549513031514
........................................................................................................................................................................CGTGATCTCTTAGTGGCATCTA.............................................................................................221537.005373645646105011
.............................................................................................................................AATGGCACTGGAAGAATTCACGT.......................................................................................................................................231464.00464369162219110
..............................................................................................................................ATGGCACTGGAAGAATTCACG........................................................................................................................................211455.004550416110244
.............................................................................................................................AATGGCACTGGAAGAATTCACA........................................................................................................................................221352.0035212536323822
..............................................................................................................................ATGGCACTGGAAGAATTCAC.........................................................................................................................................201245.0024512221795
.............................................................................................................................AATGGCACTGGAAGAATTCACT........................................................................................................................................221148.001482112209815
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGG.....................................................................................................................................251138.0013812430056
.............................................................................................................................AATGGCACTGGAAGAATTCAA.........................................................................................................................................211132.0013205227971
.............................................................................................................................AATGGCACTGGAAGAATT............................................................................................................................................181128.00128211118915
.............................................................................................................................AATGGCACTGGAAGAATTCACGGC......................................................................................................................................241128.001283214184924
........................................................................................................................................................................CGTGATCTCTTAGTGGCATCT..............................................................................................211115.0011578862183
..............................................................................................................................ATGGCACTGGAAGAATTCA..........................................................................................................................................191112.0011209703102
.............................................................................................................................AATGGCACTGGAAGAATTCACGGA......................................................................................................................................241102.001022925191424
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGAA....................................................................................................................................26183.00837620041
...............................................................................................................................TGGCACTGGAAGAATTCACGGG......................................................................................................................................22181.00818670105
.............................................................................................................................AATGGCACTGGAAGAATTCACC........................................................................................................................................22175.007505114532
.............................................................................................................................AATGGCACTGGAAGAATTCAT.........................................................................................................................................21167.00670125572
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGC.....................................................................................................................................25164.0064128431621
.................................................................................................................................GCACTGGAAGAATTCACGGG......................................................................................................................................20164.00645340205
..............................................................................................................................ATGGCACTGGAAGAATTCACGGGT.....................................................................................................................................24160.00600540015
.............................................................................................................................AATGGCACTGGAAGAATTCACGGTT.....................................................................................................................................25160.006004021836
.............................................................................................................................AATGGCACTGGAAGAATTCACGC.......................................................................................................................................23147.00475203361
.............................................................................................................................AATGGCACTGGAAGAATTCACGA.......................................................................................................................................23144.00441709225
.............................................................................................................................AATGGCACTGGAAGAATTCT..........................................................................................................................................20144.00440204362
.............................................................................................................................AATGGCACTGGAAGAATTT...........................................................................................................................................19141.004102012513
...............................................................................................................................TGGCACTGGAAGAATTCACGG.......................................................................................................................................21136.00361330011
..................................................................................................................................CACTGGAAGAATTCACGGG......................................................................................................................................19135.00353012002
...............................................................................................................................TGGCACTGGAAGAATTCACG........................................................................................................................................20133.00330310110
................................................................................................................................GGCACTGGAAGAATTCACGGG......................................................................................................................................21129.00292194013
.............................................................................................................................AATGGCACTGGAAGAATTCC..........................................................................................................................................20128.00280106210
.............................................................................................................................AATGGCACTGGAAGAATTCG..........................................................................................................................................20127.00270003240
.............................................................................................................................AATGGCACTGGAAGAATTCACGTT......................................................................................................................................24120.00200200135
...............................................................................................................................TGGCACTGGAAGAATTCAC.........................................................................................................................................19119.00190190000
.............................................................................................................................AATGGCACTGGAAGAATTCAG.........................................................................................................................................21118.00180004140
................................................................................................................................GGCACTGGAAGAATTCACGG.......................................................................................................................................20117.0017182015
.............................................................................................................................AATGGCACTGGAAGAATTCACGCT......................................................................................................................................24115.00150000150
..............................................................................................................................ATGGCACTGGAAGAATTCACGGT......................................................................................................................................23115.00150130110
..............................................................................................................................ATGGCACTGGAAGAATTCACGGGA.....................................................................................................................................24115.00150100023
........................................................................................................................................................................CGTGATCTCTTAGTGGCATC...............................................................................................20115.00151210110
.............................................................................................................................AATGGCACTGGAAGAATTCACGGCT.....................................................................................................................................25114.00141000112
droAna3
T--------------------------------------------------------------------------------------------------------TCT-CCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCT--ATACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAT----------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.............................................................................................................................AATGGCACTGGAAGAATTCACGGG......................................................................................................................................241128258.001282584904114611162051691533342484
.............................................................................................................................AATGGCACTGGAAGAATTCACGG.......................................................................................................................................23180543.00805432893477024103031853431932
.............................................................................................................................AATGGCACTGGAAGAATTCACG........................................................................................................................................22179574.00795742124290322483491815430702
.............................................................................................................................AATGGCACTGGAAGAATTCAC.........................................................................................................................................21166838.0066838115588872124812889140478
.............................................................................................................................AATGGCACTGGAAGAATTCA..........................................................................................................................................20132703.0032703690229623243735715110
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGT.....................................................................................................................................2519851.00985119673745340318485206
.............................................................................................................................AATGGCACTGGAAGAATTC...........................................................................................................................................1918357.00835779292064223714523
..............................................................................................................................ATGGCACTGGAAGAATTCACGGG......................................................................................................................................2315198.0051985048563102457
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGA.....................................................................................................................................2513326.0033267251272106140332751
..............................................................................................................................ATGGCACTGGAAGAATTCACGG.......................................................................................................................................2212959.002959287925021340
..............................................................................................................................ATGGCACTGGAAGAATTCACG........................................................................................................................................2112432.002432236922102029
.............................................................................................................................AATGGCACTGGAAGAATTCACGT.......................................................................................................................................2312295.0022952423751153221574
.............................................................................................................................AATGGCACTGGAAGAATTCACGGT......................................................................................................................................2412278.00227836175151325071188
.............................................................................................................................AATGGCACTGGAAGAATTCACT........................................................................................................................................2211349.00134915234124333733
..............................................................................................................................ATGGCACTGGAAGAATTCAC.........................................................................................................................................2011308.0013081265105631
.............................................................................................................................AATGGCACTGGAAGAATTCACA........................................................................................................................................221816.0081614726969171394
..............................................................................................................................ATGGCACTGGAAGAATTCA..........................................................................................................................................191720.0072070200198
.............................................................................................................................AATGGCACTGGAAGAATTCACGGC......................................................................................................................................241473.0047367145104761143
.............................................................................................................................AATGGCACTGGAAGAATTCACGGA......................................................................................................................................241467.004671966361971112
.............................................................................................................................AATGGCACTGGAAGAATT............................................................................................................................................181432.004321021626921222
.............................................................................................................................AATGGCACTGGAAGAATTCAA.........................................................................................................................................211380.00380331752265238
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGAA....................................................................................................................................261373.0037331311122710
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGC.....................................................................................................................................251366.003667511732427120
........................................................................................................................................................................CGTGATCTCTTAGTGGCATCTA.............................................................................................221332.003321121232062546
.............................................................................................................................AATGGCACTGGAAGAATTCAT.........................................................................................................................................211328.00328212028107170
.............................................................................................................................AATGGCACTGGAAGAATTT...........................................................................................................................................191320.0032052001898152
...............................................................................................................................TGGCACTGGAAGAATTCACGGG......................................................................................................................................221307.0030729631142
.............................................................................................................................AATGGCACTGGAAGAATTCACGC.......................................................................................................................................231287.00287284604227144
.............................................................................................................................AATGGCACTGGAAGAATTCACGGTT.....................................................................................................................................251270.0027032301284139
.............................................................................................................................AATGGCACTGGAAGAATTCACGA.......................................................................................................................................231256.0025673522162390
..............................................................................................................................ATGGCACTGGAAGAATTCACGGGT.....................................................................................................................................241237.00237219012312
.............................................................................................................................AATGGCACTGGAAGAATTCAG.........................................................................................................................................211232.00232150592129
...............................................................................................................................TGGCACTGGAAGAATTCACGG.......................................................................................................................................211232.0023222630021
.............................................................................................................................AATGGCACTGGAAGAATTCT..........................................................................................................................................201185.001853500205080
...............................................................................................................................TGGCACTGGAAGAATTCACG........................................................................................................................................201175.0017517301010
.............................................................................................................................AATGGCACTGGAAGAATTCACGTT......................................................................................................................................241140.0014080184578
.............................................................................................................................AATGGCACTGGAAGAATTCACC........................................................................................................................................221121.001212454491623
...............................................................................................................................TGGCACTGGAAGAATTCAC.........................................................................................................................................191115.0011510900024
................................................................................................................................GGCACTGGAAGAATTCACGGG......................................................................................................................................21192.009265600138
..............................................................................................................................ATGGCACTGGAAGAATTC...........................................................................................................................................18187.00877900125
..............................................................................................................................ATGGCACTGGAAGAATTCACGGGA.....................................................................................................................................24185.00857480003
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGG.....................................................................................................................................25170.0070202821055
.............................................................................................................................AATGGCACTGGAAGAATTCACTT.......................................................................................................................................23154.005410005930
................................................................................................................................GGCACTGGAAGAATTCACGG.......................................................................................................................................20148.00483720027
...............................................................................................................................TGGCACTGGAAGAATTCA..........................................................................................................................................18148.00484700001
.............................................................................................................................AATGGCACTGGAAGAATTCACGGAA.....................................................................................................................................25147.00473311048
.................................................................................................................................GCACTGGAAGAATTCACGGG......................................................................................................................................20146.00463720052
........................................................................................................................................................................CGTGATCTCTTAGTGGCATCT..............................................................................................21146.004621101374
................................................................................................................................GGCACTGGAAGAATTCACG........................................................................................................................................19141.004124002312
..............................................................................................................................ATGGCACTGGAAGAATTCACGGT......................................................................................................................................23137.00373601000
.............................................................................................................................AATGGCACTGGAAGAATTCG..........................................................................................................................................20137.00371006723
.................................................................................................................................GCACTGGAAGAATTCACGG.......................................................................................................................................19136.00362730033
droBip1
T--------------------------------------------------------------------------------------------------------TCT-CCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCT--ATACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAT----------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droKik1
--------------------------------------------------------------------------------------------------------------CATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTTATTTCT--AAACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGA-----------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
C----------------------------------------------------------------------------------------------------------T-CCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCT--ATACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGAATAAGACATCAAATCAAATCAAA---------------------------AGCT-----------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
----------------------------------------------------------------------------------------------------------CT-CCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTC--ATACCACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGA-----------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
----------------------------------------------------------------------------------------------------------CT-ACATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCT--ATACCACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGA-----------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droBia1
---------------------------------------------------------------------------------------------------------------ATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTGATTT-T--ATACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGA-----------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
---------------------------------------------------------------------------------------------------------------ATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTT--ATACAACCCGTGATCTCTTAGTGGCATTTATGGTGCGGGA-----------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEug1
CTT-----TGG----AAAGTCATTTTGT--AAGTATATAATAAAATCTAAAGTGAAA-------TCAAAGAAGAAGTTGCAGAATCTT-------GTGAAGTGT-TCAATCATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTCT--ATACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGGGATTAAAACATCCAA-AAGTT-GAA---------------------------A--------------------------------SizeHit CountTotal NormTotal
No Reads
dm3
T----------------------------------------------------------------------------------------------------GGTATAT-AGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTT--ATACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGAATAAAACATCCA-----------AAATGAAACGAAATCCGAAACTTTCAAAGTT-----------------------------SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.............................................................................................................................AATGGCACTGGAAGAATTCACGGG......................................................................................................................................2413967193.0039671937110798521716422786531354445644107019071369116100522312975222180196718261041224444968043544343443641241310271355778102973971132241765111469699178523137120101357658116000000000000000002417112240206702382261213271374448170511347147460311091709133352175312914438141549910368421120147033183501122097127223370360954025444114617124162367358340390997609523655809787115394132520692657968226651476921589108984514176121571715261751620987512393255360204463176210681948240487729981499153023292603226564085512083348343865392278101137718331116211259626174707547203473476452537604399811045963148895948748876512321159318614210211641118504623422001114941221471002603554569574764648445110337877830306043139148816501843194000138498504135905419345851226689667681167304033743148072650821421714841913813824971170126225651363053518325687014150950073872566826932471226791932424416358256423518031775919372109543352903378912946738433445201042444841404786841144185223974270652186418282167228916737143021283243120721492327332313055797628314145454791141257
.............................................................................................................................AATGGCACTGGAAGAATTCACGG.......................................................................................................................................2311719414.001719414100056510316535132581161950207054063341023107115000002890945940675910200611747132826222261554101394392616362119244058085069710300000000000000000112714233565529016971822601821161821042073563208772113433766148431345782763174224294232388444152027171771848191554550637212171105346255172196467134331201751831483174553148225214324313545250379337472428357942258219168394616128826643734017811182259999775529971243835414735688849637104603125821326615391565431783699493743334290634388521402139462324310846942941239601814342308155192804939899511079449151389925340262503826236203286101323213279326499117945001528115642439598613822502195222194003121138018021530106114262921649151383175901080782384518203171454968812896260341450010255774698563329893579303625633472950955047014514569715100598421101166331513502776625715432560114437209931421750291127317540771651027507621013409711152533182983234
.............................................................................................................................AATGGCACTGGAAGAATTCACG........................................................................................................................................2211524050.001524050000013258017555920781150664150616381523151044150845020919601717151726481036791603798256206529028793141309175368418592586592814012840130649803132000000000000000002432113010158015714576057718714683091281255694711359231112392342324814920215002893957547965376491146771152893520429181833224716524371174892241181068223021681611841329737665243637855265050333431662422339117171672449791497425612240585054539704291201961633207523821626351061132894826362131534816456159981705163002962106176585316027062610989353263381538375032171614211461372078410146573812637803019905972611011137401754221507128437868320596138045170021611386225992846227021535113852193304011021025460604070262211453030175961238151755410657921188159191517535747747221216921994227821521918243219110699148707579766259395813920844530408236702326931294709619216003416848369522721237251856836741627869914506019063267933693529120286862172020121
.............................................................................................................................AATGGCACTGGAAGAATTCAC.........................................................................................................................................2111151484.00115148400008815002201761901110318021728122746052104164847131613191470271279350316237140590309586212543434447596768859801154322204725567100000000000000000172116148615025482801777833021960501152282650241135394716338239262215197031203211642383625513108122618066516241141022411350495626352497562777210136103426012139220212492244270618011689104712334268111411118465565354046487403033331699515165714415142551327644119102319296829773035993772711953401342456927282536671648285881268154146296169261692826203581076273837154584099706496719514525937455342230107600126811732185948772082110270327641025780023457890401060015147422261020771814124057900914567111009333323574335539073268882477817033206751507124051242363404958951655593981412890623284152349121133164681899619766291904365230333127241161244898117120527771242018851386922788860765163128313
.............................................................................................................................AATGGCACTGGAAGAATTCA..........................................................................................................................................201387820.00387820000044140011402021073042611041902086202343716665510194468272545629173246538779140531531803588241200027227838000000000000000006566459041612076241519224740911323533130205866389516391820462073164022292990242952164143278134375875506152081019141474383857182934939622382272351141601022453611241810131859298901226442653879353810281995212372879342356551690763247191332811008491184623025331591841618711014168304518722540140465570438370470415693884284749135355001711381959206111410917061996617450125319940300020102141811253617941299818569311824103460323928232104214841134271207214962302159762673555214975591208111743922125257121531192514163318837377573161421002218122417749449301930171649886115951337422278925199
.............................................................................................................................AATGGCACTGGAAGAATTCACGGATC....................................................................................................................................261187500.00187500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012035067149000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.............................................................................................................................AATGGCACTGGAAGAATTC...........................................................................................................................................191185290.0018529000000000000000200000161134101313161940140132550252214161014493413461017315182312500083791100000000000000000240140000010600101112100049262010000201101593752421214071035215285101001280000114132202104431444173148453817218701310140111414546724780203182090150441572248899801410368320288166702247944001690273782262873229425178900152920241114827805802078010710140153668141825254008150244773474024761333251300401154400001000060003444128774482730470395148381713400633752339332045353083930556182108572011595372898537183856153542362213707720002341451527865279157743582446910665890878430713055
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGT.....................................................................................................................................251169830.001698300000640103202022000019132200100000000039402427371230406517817944353570931500000000000000000000000001133044000811574410302550211761254721201973301119067017030201003120484202171166833111376146259198238153200200195190812103004091002882130242100507811886158254456495911330222701636415810641412700220121899234554813372724515912810203144208403646928781855125012091252134535431159640237254611555590017292010733336001453441124240040128104000001000004857538415964031727550935024393217120318481109123314171696006402739589122480773275327131358023081715814542093395571611046121542134813120090843360557719668998132722663114
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGA.....................................................................................................................................25152486.0052486000021000100000001101579000000000000182324131571529231144551516283129800000000000000000000000120041015300017275128139181013361731300014214140312201211373816045001117948110052875631206614183438878843220110100511019218601590148825976195243008810209815812258624005823945745316121258201330013105317166179136990958748948858330479837011811531194895001085006211413000192167412500000930200000000000792682083285166035727261399201475000657501470489165443382158314257187288101372111088803257567107221399010112212433216264151741571856184212000583123216
.............................................................................................................................AATGGCACTGGAAGAATTCACGATC.....................................................................................................................................25151197.00511970000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000432227975000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................AATGGCACTGGAAGAATTCACGGT......................................................................................................................................24135150.00351500000110100301001000020141200120000000017721426111481273416371551323277618240000000000000000000000000001041500091410411732006119000100101000112421040343807074011044830002548571151211169657140685645410110120157350690454217236264774713575557048178182734122041243360242259710105400625351197461131403281911631942234891378439551853370048270435410000145112180001014500000000000000024721361651337193379188946748002406304254433318368324108514966270278115762401030839814210523824001001211101448444018083565731327754051101033
........................................................................................................................................................................CGTGATCTCTTAGTGGCATCTA.............................................................................................22125108.0025108000012041215302060000039427210471311121160203441292236111131464013611127496117214123180002511884700000000000000000000019830293143143032189111991321611266370464015023975757124219406000301518500000010001223100564622732162271332418011322711100000902911004761052326181323384711512508039232429571656150193395140000069103008100888195240144162254437464109521251610001000061452116711001155580350000050100020000141038347151018589634819082241262819001108764367565577734004735887837286627511342801435793757610100000313101245384317256220211790140090
.............................................................................................................................AATGGCACTGGAAGAATTCACATC......................................................................................................................................24121481.0021481000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000020897579000000000000000000000000000000000000010000000000001000000000010001000000000000000000000000000000
.............................................................................................................................AATGGCACTGGAAGAATTCACGT.......................................................................................................................................23116484.00164840000000001000010010065900010000000011419581837462865914540100000000000000000000000000011101040800132300271000000000000031830100191701200010010000200026333517283921510144603004002044511005021211632705361146100406010351272430022317911300002537000100322393076756269416941161432921451930600630146740002782220000004000000000000000010185411286690106333219130001515279267430371795361891155503432000351284274695167000000022001185334991919223167643301510340
.............................................................................................................................AATGGCACTGGAAGAATTCACGGC......................................................................................................................................24112599.00125990000100101100003000060300010000000071537653104117212761432321409800000000000000000000000000004456000203022022000020010000000000241030207010221000001001014513192757234182508777941400000000112926032312100501211243014019265192249002283121000027380000002324118404188335465618278328222451248003421086300020241240000160100000000000001271376726018293228191415000147157118158150349100350599210727551425513121703126918926610000020010281738245681332361441620133
.............................................................................................................................AATGGCACTGGAAGAATT............................................................................................................................................18110945.00109450000000000000001010091100011321623252103111116024142424130004038100000000000000000011110000000010200020600107000000100000115401005308343482243080000016240007292121161702201012000190300483470315319277242367257742000155424121691530038078114830163725590010000421783119719219164137162375401120002503759400041720510010053000000000211010502582718837266179003210056730653169362311074243629125422590361493115332100020000000001941079629126901823151050001
..............................................................................................................................ATGGCACTGGAAGAATTCACGGG......................................................................................................................................2319744.00974400002300122030432000335000024729282802021010362118721818471116181000351000000000000000000000070441901091440410692118202049322100005327309018180407523000025364847591121101155832422282720222760000000180684405336291836353487816759140007029352411380085482723112242202020472710234353236312625718428432724189701410008907420001219080000015000000010010020955415634960510372377500046463535244918160112612266308411608105435201387000000501002644401818514822919808001422
.............................................................................................................................AATGGCACTGGAAGAATTCACGGA......................................................................................................................................2419014.0090140000480015253960000000221000000000000462010353243813215245964000000000000000000000000000112530001151121160389010100103010031650101038020110010100152000108281238132171297120100103200293002913752017188313546500030293141401910012084923025111800010010247135345814433566212641246225144085300279010800001016029000001100000000000000144401412254432917126131001065953533865472202823321002339801551151512216725000000020203267625308103921601280210214
.............................................................................................................................AATGGCACTGGAAGAATTCACA........................................................................................................................................2218880.00888000007000045030000000311000100000000113150166234312929010000000000000000000000000003204000020622001341000283080000011010010014112801071605044000000100001200172920106254642600000000507769046002338022060177002010742355260001316340001051100000000013325954393116422454182200032157004709412000314502600000550000000000000105836052284765261311702000320242223244323313489156202956862640257218024676150000000100003571202455162181251209060080
.............................................................................................................................AATGGCACTGGAAGAATTCACT........................................................................................................................................2216668.006668000000000000000000000311011000000004421841041047014173500000000000000000000000000102000000111520000000135000000100000504502002601205700010000000000016213014292010475170001210000282202900850601501620002016938318000405270220042500000030005161895381116310111412360053031221000354002100001270000000000000016340843329343743861100018510593166151011486307910321869129015313703132023000000200003821147463111125230162040060
.............................................................................................................................AATGGCACTGGAAGAATTCAA.........................................................................................................................................2116412.00641200004000001000000000466001110000000010001194011033031584510000000000000000000000000000000110001012001607001610000100400000409201104513191571000000000040004951211620180300000000365903800102101501010178400000408315300041126000001700300000012122121071263764100146100650414100011120150000043000000000000000194597175381177785287904003251226210161551224131972314645218602262440182580000000100009336013735434447010030
........................................................................................................................................................................CGTGATCTCTTAGTGGCATCT..............................................................................................2115993.00599300000000100000000000118420140800000181156141524131861518213520500019154000000000000000000001171224160001391234351041800112000128306012202010003022000050110013943411244404314111619452400000202410011180820333681017283300010095322179200153800000159000000845867528268030463669424568100010001086701743000141616001001000010000060098822921054151116545838621000256211827141198181712297192711663102326091731081100000207000032615856371028040020
.............................................................................................................................AATGGCACTGGAAGAATTCACGC.......................................................................................................................................2315034.00503400000000100000000000001000100000000223510843804123468840000000000000000000000000000000100040112020000100100000000000208202002702010000000001000030816141685342011223000000000020170120061010434000010681417000015411200005100000000011441214198131421311312010020500210120000360120000050000000000000008810353242862107218138020007061386275532161279154721462066371115223800000011000671548323266134010030
.............................................................................................................................AATGGCACTGGAAGAATTCACGA.......................................................................................................................................2314046.004046000041001425100000002000000000000000205211112121142151100000000000000000000000001000000000207100403007411000000000001263010301001022000000000101000293533202050000000000344103131814212230757100000341823560001105160000068000000100195321022291031165318142013788136004301121000111201200000120000000000000002616711130312084350300010491698612833120172617524607557012833590000000200011634511335346752010064
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGC.....................................................................................................................................2514040.0040400000000010000000000044200000000000041210411213186191332714281310000000000000000000000000000005100010111121100010000000000010201480301316000000036001410021833169137522291830000000001013100540313449245900000362317700905515325413015000000010136192148322024252976281540001519400211107120000161701500000600010000000000014178129221192768030002714342392076013518456367063431334438210000010100176472116461112121300600240
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGG.....................................................................................................................................2514028.00402800000000000030000000001000001000000021210115311100124112000099865165000000000000000000000100000000010001000000000000000001010251401460200202002100300000002226551000000000000014140151115511366374150002053012100000101300100100000000011431894218136530111000520470000841500000800000000000000028107125437180114023000744355181121111032452634820139671110132200000030000110217581031114460301240
.............................................................................................................................AATGGCACTGGAAGAATTCACC........................................................................................................................................2213716.003716000020000000000003001100000000000001420322016103603845050000000000000000000000000001000000000350001000004000000000000001301010001105700020000000300014214720188269191200000000010322601900050204010001001220457000022420000029000000000437919115714181460000170001201160000117090000010000000000000007046533303575009780700153434262818311502648814756163081760110181700000000000451135919295432000020
..............................................................................................................................ATGGCACTGGAAGAATTCACGG.......................................................................................................................................2213454.003454000032000110000000000000010100000002010023021210100200000210000000000000000001000000200033134327314004790000000001005084120139010000123401310100004563332631400011001062937020126107243382630400110201219300060371031070127002000240294261112244716091816333100200001100300002803000003000000000000000594283214836278136910000201322351793070868780118136534670000000000099279100294490770300313
.............................................................................................................................AATGGCACTGGAAGAATTT...........................................................................................................................................1913301.00330100000000000000000000000000200000000000100010000110010000000000000000000000000000000000000010000000000000000000000000410102110101200010000000000021100900000000000000043001000404465100000203205000030100000000000000360108512021901000000000004103000536011000001101000000000000061551534802030008223898000101010300253303955102550000000000045812203205936175154040030
.............................................................................................................................AATGGCACTGGAAGAATTCACGGTT.....................................................................................................................................2512832.0028320000000000000000000000000000000000011000050001100120000000000000000000000000000000000000000000000000000000000000000011010000010000001000000000000241022001000000000005230300100108280000102191101000303300000154000000410531291094453842100163002101610001270140000040000000000000004391305512805001442373231175017142216501077100611241000000000028969026185120286154010072
.............................................................................................................................AATGGCACTGGAAGAATTCACGGAT.....................................................................................................................................2512806.00280600000000000000000000000000000000000000000000000010200000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000001000000000011021100000225000000000100000020000000100000000000010020110000001653990000001100000101000001000000000000000022312020000002120010020014504500111100000000001439122675000000
.............................................................................................................................AATGGCACTGGAAGAATTCACGCT......................................................................................................................................2412688.00268800000000000000000000000000000000000001110301026000310000000000000000000000000000000000001010000000000000000000000000100000000200000000000000000036832114231000000000000710700000000002000000009100000000000002000000000001300000020000100005103010003902000001000000000000000134536227798521840600116910414285301412428163012107800149000000000006830010000000
.............................................................................................................................AATGGCACTGGAAGAATTCAT.........................................................................................................................................2112670.002670000041000000100000000022002000000000011100012402540000000000000000000000000000001000000040040011300029300110000010004201000017063000000001000000210415220120000000000224402801422219025027000000932195000201300001021000001000221758631069460000300003306111000192701800000290000000000000012520827135273009470200110063623401019908428143669015211401971400000000000712458514232927010000
..............................................................................................................................ATGGCACTGGAAGAATTCACG........................................................................................................................................2112625.00262500000000011100300100100100012026151000011305301231113210001000000000000000000000000006500090214312914101835414030002311115212701031180302300121010800000043328430241000000000045570462114220292454820000017021112000712990001007003200000173105372220122846251000011100210420000480600000600000000000000045311151592718865103000322020250834052142291406210035173000000000000521515924234139000024
................................................................................................................................GGCACTGGAAGAATTCACGGG......................................................................................................................................2111986.001986000000000000000000001130000010000000103221200020032231000210000000000000000000000000030000000000212031000000000010000000000000000000722061172004108291414122634200000100000110011000201100000301396712005070000001412002000110631932380010110000100000820100000100000000000000000000000069454251632919229149030004843111052032532790611132919350000001000021227668600000127
.............................................................................................................................AATGGCACTGGAAGAATTCAATC.......................................................................................................................................2311766.0017660000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000170458000000000000000000000000000000000000020002000000000000000000000000000000000000000000000000000000
.............................................................................................................................AATGGCACTGGAAGAATTCAG.........................................................................................................................................2111743.0017430000000000000000000000000010000000000000001000006100000000000000000000000000000000000000000000000000110000100011000000000000000000000000000000000012110000000000000008110300080003626100000021120000001000000000000000000014320011000000010000201600005305000008000000000000000781957312684372226500000607254141616110411512282506546103450000000000042363447000000
.................................................................................................................................GCACTGGAAGAATTCACGGG......................................................................................................................................2011610.00161000000000110000000000413000000000000011013111002121563100000000000000000000000000000000000000000000300000000000000000000000000000001223000200000005211716127261101000000000042001010050010001020041322300501632062890010000005313283830210630000000004300000000000000000000000000000000865361782181255710300077491510000121021157012410130000000000081842169120000152
.............................................................................................................................AATGGCACTGGAAGAATTCACGTT......................................................................................................................................2411468.001468000000000000000000001100000000000000411000212180012110000000000000000000000000000000000000001000000000000000000000000000000200000002000000000000151528003211110000000024000000120114000020050910000041000006700000001045373101261060005000100141000550200000400000000000000021212811907050012413151814752081313312202326001760000000000113049613624288561000020
.............................................................................................................................AATGGCACTGGAAGAATTCACAT.......................................................................................................................................2311418.00141800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000001000000010000000000100000000000000000000000000000011000000000001324460000000000010000000000000000000000000002040000000300210000001010010000000000000000001711322000000
..............................................................................................................................ATGGCACTGGAAGAATTCAC.........................................................................................................................................2011395.00139500000000000000000200100200010115910000000100000000000000000000000000000000000010030000000213612122200372400000000000040105000121102015000100200000000063020003020000200000354902302811116034060000000442080000708000000020000000001510524166111022115000000002001310001602000004000000000000000171611356151155310000014111012350105144135034006813000000000003490389143816000010
................................................................................................................................GGCACTGGAAGAATTCACGG.......................................................................................................................................2011365.00136500000000000000000000170000000000000100000011010100020000000000000000000000000000000000000110000100000000000000000000000000000000000011020800000111869647080000000001000100002200000000001018367400016014500000151400000020027833451000100000000000020000000000100000100000000000000064351211382717110730000045022112000719201100177130000000000099525320000017
.............................................................................................................................AATGGCACTGGAAGAATTCACGAC......................................................................................................................................2411306.0013060000000000000000000000000000000000000000021002000350000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010221002011000000000001004000000000000000001010000000000000000000000000005000000000000103615500200000000010000000000000000000000017041130300000133201100121818303000000000000000000000001000000
.............................................................................................................................AATGGCACTGGAAGAATTCATC........................................................................................................................................2211274.0012740000000000000000000000000000000000000000010010000000000000000000000000000000000000000000000000000000000000000000000000000000020100000000000000000002000000000000000000102000001000110000000010000000000000000000000000000000000000000112590000000000003101000000000000000000000080108020000012400000020021601100000000000000000100000000000
.............................................................................................................................AATGGCACTGGAAGAATTCC..........................................................................................................................................2011264.001264000000000000000000000000001000000000100002070003156510000000000000000000000000000000000000001002000000000000000000002311300010101108130020000010000001040312122000000000001523080010000204000000100700001020010000000000000010720001020100001500011014240001015020000030000000000000007425371131060000086115334181401412133333001227000023000000000001021139101315010010
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGAA....................................................................................................................................2611191.0011910000000000000000000010000000000000000000101001100100000000000000000000000000000000000000001000001003050000000000000020000012000000000000000000001403150000010000000007607101407012018000000320700003160100005000000010052421760330192631719110045056001101000001301000002000000000000000633727853122030001591189243010417801918022123000000000000198920091115000030
................................................................................................................................GGCACTGGAAGAATTCACG........................................................................................................................................1911000.0010000000000000000000000023000000000000000000010010000100000000000000000000000000000000000000102000002000100000000000000000000000000000000000000000002986793050000000000001000001000000000000021727100020112700000020020000031042980000000000000000110000000000000000000000000000000048284241191614010560200057362050020213504502559000000000009941435010000
...............................................................................................................................TGGCACTGGAAGAATTCACGGG......................................................................................................................................221981.0098100000000020000000010020000000000000000010020010021000000100000000000000000000000110159000441403618810161110310000117709000000000000102000024201000002310000501100000000001102101001101000000006020200208100000870000001009483136663142100000000730110000110100000100000000000000018174230238326000000201372102047660101600962200000000000282414624284201000110
.............................................................................................................................AATGGCACTGGAAGAATTCACGAT......................................................................................................................................241969.0096900000000001000000000000000000000000000000100001010200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000010000000000000000000000010000000000000000000000010141010010000007501350000000000010000000020000000000000000315020000000201201000100282021000000000000000012140021000000
droSim2
T----------------------------------------------------------------------------------------------------GGTATAT-AGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTT--ATACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGA-----------------------------------------------------------------------------------SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.............................................................................................................................AATGGCACTGGAAGAATTCACGGG......................................................................................................................................2411145961.00114596113080913205412953372026936392822883174422024613442348332460413231371552444151131
.............................................................................................................................AATGGCACTGGAAGAATTCACGG.......................................................................................................................................231429731.00429731639394258510634419111199791162601419377636505713152197746161520670112261
.............................................................................................................................AATGGCACTGGAAGAATTCACG........................................................................................................................................221222375.00222375128845475110422151653216678272946145353380812782151649471058
.............................................................................................................................AATGGCACTGGAAGAATTCAC.........................................................................................................................................211163389.0016338988521897732608237737506126371445299124884730180431417112
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGT.....................................................................................................................................25134397.0034397170913381932540013820139037024874213181291024152757
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGA.....................................................................................................................................25131889.00318891163664382578180003514526157638925815418467681126
.............................................................................................................................AATGGCACTGGAAGAATTCA..........................................................................................................................................20128841.0028841103230131308111911541040812466548386853151378030
.............................................................................................................................AATGGCACTGGAAGAATTC...........................................................................................................................................19119127.001912795012565743791595220642076996272024430112
.............................................................................................................................AATGGCACTGGAAGAATT............................................................................................................................................1814882.0048821064149161814244203492312875100000
........................................................................................................................................................................CGTGATCTCTTAGTGGCATCTA.............................................................................................2214056.0040563581023089104427713402741502268203
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGG.....................................................................................................................................2513025.00302512849534865781005047419304001
.............................................................................................................................AATGGCACTGGAAGAATTCACGGT......................................................................................................................................2412831.002831146106315400979108155317020511841319
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGAA....................................................................................................................................2612383.002383114668523550057131395541718000
.............................................................................................................................AATGGCACTGGAAGAAT.............................................................................................................................................1712358.002358000000226219671899001000
..............................................................................................................................ATGGCACTGGAAGAATTCACGGG......................................................................................................................................2312153.0021531801931217267228947916165919837010
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGC.....................................................................................................................................2511698.0016982401383550043647415223131701110
.............................................................................................................................AATGGCACTGGAAGAATTCACGGA......................................................................................................................................2411372.00137223218810218002382442815124936137100
.............................................................................................................................AATGGCACTGGAAGA...............................................................................................................................................1521200.50240100000058111172224000000
.................................................................................................................................GCACTGGAAGAATTCACGGG......................................................................................................................................2011113.0011131801602128111322112500300000
........................................................................................................................................................................CGTGATCTCTTAGTGGCATCT..............................................................................................2111045.0010451563745525818413334263100100
.............................................................................................................................AATGGCACTGGAAGAATTCACGGC......................................................................................................................................2411016.0010162272051758008011031161282735010
.............................................................................................................................AATGGCACTGGAAGAATTCACGT.......................................................................................................................................231939.00939111441160028341015445116002
..............................................................................................................................ATGGCACTGGAAGAATTCACGG.......................................................................................................................................221920.00920135833417129814254140511000
................................................................................................................................GGCACTGGAAGAATTCACGGG......................................................................................................................................211836.0083689146301301786401000
.............................................................................................................................AATGGCACTGGAAGAATTCACA........................................................................................................................................221635.0063577224900147234434446603000
................................................................................................................................GGCACTGGAAGAATTCACGG.......................................................................................................................................201559.0055910207330111530100000
.............................................................................................................................AATGGCACTGGAAGAATTCACGA.......................................................................................................................................231526.0052695491250010917919830326000
................................................................................................................................GGCACTGGAAGAATTCACG........................................................................................................................................191375.003751001212100367000000
..............................................................................................................................ATGGCACTGGAAGAATTCACG........................................................................................................................................211375.0037518102234129763215201000
.............................................................................................................................AATGGCACTGGAAGAATTCAA.........................................................................................................................................211364.00364558590058110495261200000
.................................................................................................................................GCACTGGAAGAATTCACGG.......................................................................................................................................191355.003557356201124611190000000
.............................................................................................................................AATGGCACTGGAAGAATTCACGGAA.....................................................................................................................................251339.003391937672009289300210000
...................................................................................................................................ACTGGAAGAATTCACGGG......................................................................................................................................181333.003331516124009515262400000
.............................................................................................................................AATGGCACTGGAAGAATTCACGC.......................................................................................................................................231317.003178244730065689530400000
.............................................................................................................................AATGGCACTGGAAGAATTCACT........................................................................................................................................221251.002513711050056126127303000
.................................................................................................................................GCACTGGAAGAATTCACG........................................................................................................................................181191.00191112310161433147000000
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGTA....................................................................................................................................261187.001875329910012526410218000
..................................................................................................................................CACTGGAAGAATTCACGGG......................................................................................................................................191186.001863548481008164320300000
................................................................................................................................GGCACTGGAAGAATTCAC.........................................................................................................................................181175.001750001520001165100000
...............................................................................................................................TGGCACTGGAAGAATTCACGGG......................................................................................................................................221171.0017119139380116543215001000
..............................................................................................................................ATGGCACTGGAAGAATTCAC.........................................................................................................................................201155.00155112156251557103101000
........................................................................................................................................................................CGTGATCTCTTAGTGGCATC...............................................................................................201153.0015370124908471001100000
..................................................................................................................................CACTGGAAGAATTCACGG.......................................................................................................................................181140.001403843131001714608000000
.............................................................................................................................AATGGCACTGGAAGAA..............................................................................................................................................162128.00256000000305200174000000
.............................................................................................................................AATGGCACTGGAAGAATTCAG.........................................................................................................................................211122.001222101005755004200000
....................................................................................................................................CTGGAAGAATTCACGGG......................................................................................................................................171116.0011600000012223475000000
.............................................................................................................................AATGGCACTGGAAGAATTCACGGTT.....................................................................................................................................251107.001071310010020291021029001
.............................................................................................................................AATGGCACTGGAAGAATTCAT.........................................................................................................................................211102.001023001002662125101000
...................................................................................................................................ACTGGAAGAATTCACGG.......................................................................................................................................17197.0097000000211192000000
.............................................................................................................................AATGGCACTGGAAGAATTCACC........................................................................................................................................22178.007873200016315112100000
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGAC....................................................................................................................................26176.007640132000513201000000
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGGT....................................................................................................................................26176.0076441114181615011100000
..............................................................................................................................ATGGCACTGGAAGAATTCACGGGT.....................................................................................................................................24174.007442020001828001010000
...................................................................................................................................ACTGGAAGAATTCACG........................................................................................................................................16172.0072000000001071000000
.............................................................................................................................AATGGCACTGGAAGAATTCACGGTA.....................................................................................................................................25168.00686313001329212008000
..............................................................................................................................ATGGCACTGGAAGAATTCACGGGA.....................................................................................................................................24165.006514133220028011001000
.................................................................................................................................GCACTGGAAGAATTCAC.........................................................................................................................................17163.0063000000450252000000
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGTAT...................................................................................................................................27160.006011144000313230037000
..............................................................................................................................ATGGCACTGGAAGAATTCA..........................................................................................................................................19157.00575003112610002000000
...............................................................................................................................TGGCACTGGAAGAATTCACGG.......................................................................................................................................21155.00555202501215003110000
........................................................................................................................................................................CGTGATCTCTTAGTGGCA.................................................................................................18150.00501121009621007100001
..................................................................................................................................CACTGGAAGAATTCACG........................................................................................................................................17148.004800000018124014000000
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGAAT...................................................................................................................................27147.00471422000018200000000
...............................................................................................................................TGGCACTGGAAGAATTCACG........................................................................................................................................20147.0047310251118106000000
....................................................................................................................................CTGGAAGAATTCACGG.......................................................................................................................................16144.0044000000223235000000
........................................................................................................................................................................CGTGATCTCTTAGTGGCATCTAA............................................................................................23140.0040312710041000210000
.............................................................................................................................AATGGCACTGGAAGAATTCACAA.......................................................................................................................................23139.0039300000619380000000
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGAG....................................................................................................................................26138.00381613410021001000000
.................................................................................................................................GCACTGGAAGAATTCACGGGA.....................................................................................................................................21137.00371612600000003000000
droSec2
TTTAAAGTGACAAAACAAGGAA---------------------------------TACCTTCTA----------------------AT-------------GGTATAT-AGATCTCGACACAGTTAATGGCACTGGAAGAATTCACGGGGTAATTTTT--ATACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGA-----------------------------------------------------------------------------------SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.............................................................................................................................AATGGCACTGGAAGAATTCACGGG......................................................................................................................................241268160.00268160475248172210927929635
.............................................................................................................................AATGGCACTGGAAGAATTCACG........................................................................................................................................22199540.00995401673451851849022465
.............................................................................................................................AATGGCACTGGAAGAATTCACGG.......................................................................................................................................23196294.009629423365475341110214293
.............................................................................................................................AATGGCACTGGAAGAATTCAC.........................................................................................................................................21164138.0064138468332658346823329
.............................................................................................................................AATGGCACTGGAAGAATTCA..........................................................................................................................................20127898.002789820201459762210659
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGT.....................................................................................................................................25117352.001735215071075220113082
.............................................................................................................................AATGGCACTGGAAGAATTC...........................................................................................................................................1917294.0072942242516644490
..............................................................................................................................ATGGCACTGGAAGAATTCACGGG......................................................................................................................................2315472.005472478212949863
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGA.....................................................................................................................................2515056.005056539237510431099
.............................................................................................................................AATGGCACTGGAAGAATTCACGGT......................................................................................................................................2412652.0026525171493146496
..............................................................................................................................ATGGCACTGGAAGAATTCACGG.......................................................................................................................................2212597.0025972444595044
..............................................................................................................................ATGGCACTGGAAGAATTCACG........................................................................................................................................2111921.0019211805433340
.............................................................................................................................AATGGCACTGGAAGAATTCACGT.......................................................................................................................................2311276.0012761587269383
........................................................................................................................................................................CGTGATCTCTTAGTGGCATCTA.............................................................................................2211063.001063938184346
.............................................................................................................................AATGGCACTGGAAGAATTCACA........................................................................................................................................221715.007155935420282
..............................................................................................................................ATGGCACTGGAAGAATTCAC.........................................................................................................................................201558.00558495181728
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGC.....................................................................................................................................251490.004907916119654
.............................................................................................................................AATGGCACTGGAAGAATTCACGGA......................................................................................................................................241443.00443742049570
.............................................................................................................................AATGGCACTGGAAGAATTCACGGC......................................................................................................................................241436.004367920710941
.............................................................................................................................AATGGCACTGGAAGAATTCACT........................................................................................................................................221432.00432452345148
.............................................................................................................................AATGGCACTGGAAGAATTCACGGTT.....................................................................................................................................251389.0038933286268
.............................................................................................................................AATGGCACTGGAAGAATT............................................................................................................................................181378.00378372512304
...............................................................................................................................TGGCACTGGAAGAATTCACGGG......................................................................................................................................221295.002952714155
.............................................................................................................................AATGGCACTGGAAGAATTCACGA.......................................................................................................................................231234.002344595688
.............................................................................................................................AATGGCACTGGAAGAATTT...........................................................................................................................................191220.0022012118090
..............................................................................................................................ATGGCACTGGAAGAATTCA..........................................................................................................................................191197.001971765214
..............................................................................................................................ATGGCACTGGAAGAATTCACGGGT.....................................................................................................................................241190.00190143181712
........................................................................................................................................................................CGTGATCTCTTAGTGGCATCT..............................................................................................211178.00178272810419
...............................................................................................................................TGGCACTGGAAGAATTCACGG.......................................................................................................................................211147.00147139710
.............................................................................................................................AATGGCACTGGAAGAATTCACGC.......................................................................................................................................231136.001362283823
.............................................................................................................................AATGGCACTGGAAGAATTCAA.........................................................................................................................................211133.00133751273
...............................................................................................................................TGGCACTGGAAGAATTCACG........................................................................................................................................201125.001251071314
.............................................................................................................................AATGGCACTGGAAGAATTCACC........................................................................................................................................221116.0011612801212
.............................................................................................................................AATGGCACTGGAAGAATTCACGTT......................................................................................................................................241109.00109764137
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGG.....................................................................................................................................251100.0010028421614
................................................................................................................................GGCACTGGAAGAATTCACGGG......................................................................................................................................21172.00724911111
..............................................................................................................................ATGGCACTGGAAGAATTCACGGGA.....................................................................................................................................24172.007261074
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGAA....................................................................................................................................26171.00711037717
.............................................................................................................................AATGGCACTGGAAGAATTCT..........................................................................................................................................20168.0068542021
.............................................................................................................................AATGGCACTGGAAGAATTCAT.........................................................................................................................................21166.0066528627
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGTA....................................................................................................................................26157.0057437412
.................................................................................................................................GCACTGGAAGAATTCACGGG......................................................................................................................................20150.0050263156
...............................................................................................................................TGGCACTGGAAGAATTCAC.........................................................................................................................................19146.004640321
................................................................................................................................GGCACTGGAAGAATTCACG........................................................................................................................................19136.003624624
.............................................................................................................................AATGGCACTGGAAGAATTCACGGTA.....................................................................................................................................25134.003451919
..............................................................................................................................ATGGCACTGGAAGAATTCACGGT......................................................................................................................................23134.003431102
..............................................................................................................................ATGGCACTGGAAGAATTC...........................................................................................................................................18131.003125105
............................................................................................................................TAATGGCACTGGAAGAATTCACGGG......................................................................................................................................25130.003030000
.............................................................................................................................AATGGCACTGGAAGAATTCC..........................................................................................................................................20127.0027013113
................................................................................................................................GGCACTGGAAGAATTCACGG.......................................................................................................................................20126.002618611
.............................................................................................................................AATGGCACTGGAAGAATTTT..........................................................................................................................................20126.002611609
droYak3
---------------------------------------------------------------------------------------------------------------ATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTACTTTTT--ATACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGA-----------------------------------------------------------------------------------SizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.............................................................................................................................AATGGCACTGGAAGAATTCACGGG......................................................................................................................................241377530.0037753025256249242726231402214704935173849517549416152
.............................................................................................................................AATGGCACTGGAAGAATTCACGG.......................................................................................................................................23171261.00712611024213923334097185511734102183463159210
.............................................................................................................................AATGGCACTGGAAGAATTCACG........................................................................................................................................22140422.0040422253295064276603208770871427121651
.............................................................................................................................AATGGCACTGGAAGAATTCAC.........................................................................................................................................21127696.00276961600402849374281466534298860108
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGT.....................................................................................................................................2519776.00977632312133531163139485209867431768
.............................................................................................................................AATGGCACTGGAAGAATTCA..........................................................................................................................................2019711.009711143171616048767262242540010
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGA.....................................................................................................................................2515457.0054571574427251762611444113316239
..............................................................................................................................ATGGCACTGGAAGAATTCACGGG......................................................................................................................................2313793.003793192588356110218000799
.............................................................................................................................AATGGCACTGGAAGAATTC...........................................................................................................................................1912385.002385851195321394897020013
........................................................................................................................................................................CGTGATCTCTTAGTGGCATCTA.............................................................................................2212334.0023341301241854169915280140
.............................................................................................................................AATGGCACTGGAAGAATTCACGGC......................................................................................................................................2412189.002189472119861610188100010
..............................................................................................................................ATGGCACTGGAAGAATTCACGG.......................................................................................................................................2211553.00155317148335122120100
.............................................................................................................................AATGGCACTGGAAGAATTCACGGT......................................................................................................................................2411391.00139111215614142513831864838
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGC.....................................................................................................................................2511246.0012465011113811061900011
..............................................................................................................................ATGGCACTGGAAGAATTCACG........................................................................................................................................2111042.001042310075132210000
.............................................................................................................................AATGGCACTGGAAGAATTCACGT.......................................................................................................................................231589.00589211141314331191650020
.............................................................................................................................AATGGCACTGGAAGAATTCACGGA......................................................................................................................................241440.00440258124145153800130
..............................................................................................................................ATGGCACTGGAAGAATTCAC.........................................................................................................................................201430.004300416310460000
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGG.....................................................................................................................................251378.0037821312127612110006
........................................................................................................................................................................CGTGATCTCTTAGTGGCATCT..............................................................................................211308.0030826212053174140000
.............................................................................................................................AATGGCACTGGAAGAATTCACA........................................................................................................................................221293.00293144413219851160000
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGAA....................................................................................................................................261255.002551931233011500010
.............................................................................................................................AATGGCACTGGAAGAATTCACGC.......................................................................................................................................231250.002501221731215441000
.............................................................................................................................AATGGCACTGGAAGAATTCACT........................................................................................................................................221224.00224434511767960000
...............................................................................................................................TGGCACTGGAAGAATTCACGGG......................................................................................................................................221205.00205213929000600029
..............................................................................................................................ATGGCACTGGAAGAATTCA..........................................................................................................................................191189.001890183002040000
..............................................................................................................................ATGGCACTGGAAGAATTCACGGGT.....................................................................................................................................241133.0013321036030300016
.............................................................................................................................AATGGCACTGGAAGAATTCACGA.......................................................................................................................................231114.00114930240911310000
.............................................................................................................................AATGGCACTGGAAGAATTCACGAC......................................................................................................................................241113.001131010420150000
...............................................................................................................................TGGCACTGGAAGAATTCACGG.......................................................................................................................................211107.00107196400050001
.............................................................................................................................AATGGCACTGGAAGAATT............................................................................................................................................181107.001072241302035130000
.............................................................................................................................AATGGCACTGGAAGAATTCACGGTT.....................................................................................................................................25194.0094315180511401100
.................................................................................................................................GCACTGGAAGAATTCACGGG......................................................................................................................................20191.0091282570001100020
.............................................................................................................................AATGGCACTGGAAGAATTCACC........................................................................................................................................22185.008554160226320000
................................................................................................................................GGCACTGGAAGAATTCACGGG......................................................................................................................................21182.00821342720270009
...............................................................................................................................TGGCACTGGAAGAATTCACG........................................................................................................................................20175.0075070000140000
.............................................................................................................................AATGGCACTGGAAGAATTCAA.........................................................................................................................................21174.0074111374718140000
........................................................................................................................................................................CGTGATCTCTTAGTGGCATC...............................................................................................20167.0067525820000000
.............................................................................................................................AATGGCACTGGAAGAATTCAT.........................................................................................................................................21160.00601031171640000
..............................................................................................................................ATGGCACTGGAAGAATTCACGGGA.....................................................................................................................................24158.0058154100010001
........................................................................................................................................................................CGTGATCTCTTAGTGGCATCC..............................................................................................21147.0047104600000000
............................................................................................................................TAATGGCACTGGAAGAATTCACGGG......................................................................................................................................25146.00460361000000000
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGTA....................................................................................................................................26146.004615610111120000
.............................................................................................................................AATGGCACTGGAAGAATTCACGTT......................................................................................................................................24146.0046218239210000
..................................................................................................................................CACTGGAAGAATTCACGGG......................................................................................................................................19137.0037606300700015
.............................................................................................................................AATGGCACTGGAAGAATTCAG.........................................................................................................................................21134.0034012600430000
..............................................................................................................................ATGGCACTGGAAGAATTC...........................................................................................................................................18130.0030129000000000
...................................................................................................................................ACTGGAAGAATTCACGGG......................................................................................................................................18129.00292111012100011
.............................................................................................................................AATGGCACTGGAAGAATTCC..........................................................................................................................................20129.0029200022230000
.............................................................................................................................AATGGCACTGGAAGAATTCACGGAA.....................................................................................................................................25127.00271311200100000
..............................................................................................................................ATGGCACTGGAAGAATTCACGGT......................................................................................................................................23126.0026023300000000
................................................................................................................................GGCACTGGAAGAATTCACGG.......................................................................................................................................20126.0026015200450000
.........................................................................................................................................................................GTGATCTCTTAGTGGCATCTA.............................................................................................21124.00241131000000000
droEre2
A--------AG----TAAATA----------------------------------TGCCATCTG----------------------AT-------------GGTGTAT-AGATCTCGGCACAGTTAATGGCACTGGAAGAATTCACGGGGTACTTTTG--ATACAACCCGTGATCTCTTAGTGGCATCTATGGTGCGAGA-----------------------------------------------------------------------------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.............................................................................................................................AATGGCACTGGAAGAATTCACGGG......................................................................................................................................241242187.00242187509372287623749651941394555116659
.............................................................................................................................AATGGCACTGGAAGAATTCACGG.......................................................................................................................................231109673.001096733277349701311104446092199313552
.............................................................................................................................AATGGCACTGGAAGAATTCACG........................................................................................................................................221100786.00100786216818013090853503892387399
.............................................................................................................................AATGGCACTGGAAGAATTCAC.........................................................................................................................................21158132.00581324575846152879225274251098
.............................................................................................................................AATGGCACTGGAAGAATTCA..........................................................................................................................................20124590.00245901972107581241227994434
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGT.....................................................................................................................................25116222.0016222170328316614090413913976
.............................................................................................................................AATGGCACTGGAAGAATTC...........................................................................................................................................1916118.00611817448912291329242
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGA.....................................................................................................................................2515642.005642829301736727281425219
..............................................................................................................................ATGGCACTGGAAGAATTCACGGG......................................................................................................................................2315570.0055705166442313683136
..............................................................................................................................ATGGCACTGGAAGAATTCACGG.......................................................................................................................................2213556.0035563417941513539
.............................................................................................................................AATGGCACTGGAAGAATTCACGGT......................................................................................................................................2412918.0029185884970101126976180
..............................................................................................................................ATGGCACTGGAAGAATTCACG........................................................................................................................................2112461.002461237003153340
.............................................................................................................................AATGGCACTGGAAGAATTCACGT.......................................................................................................................................2311850.0018502592234198226931
.............................................................................................................................AATGGCACTGGAAGAATTCACT........................................................................................................................................221728.0072854024102663740
.............................................................................................................................AATGGCACTGGAAGAATTCACA........................................................................................................................................221707.007076443073232790
........................................................................................................................................................................CGTGATCTCTTAGTGGCATCTA.............................................................................................221692.0069213014716932031030
..............................................................................................................................ATGGCACTGGAAGAATTCAC.........................................................................................................................................201519.0051945911125320
.............................................................................................................................AATGGCACTGGAAGAATTCACGGC......................................................................................................................................241504.00504981568301106141
.............................................................................................................................AATGGCACTGGAAGAATTCACGGA......................................................................................................................................241486.00486962481719511630
.............................................................................................................................AATGGCACTGGAAGAATTCACGA.......................................................................................................................................231370.0037080461791973
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGC.....................................................................................................................................251357.003576091220785947
...............................................................................................................................TGGCACTGGAAGAATTCACGGG......................................................................................................................................221343.003433042057322
.............................................................................................................................AATGGCACTGGAAGAATT............................................................................................................................................181305.0030541122741850
.............................................................................................................................AATGGCACTGGAAGAATTCACGC.......................................................................................................................................231293.00293231462312143
.............................................................................................................................AATGGCACTGGAAGAATTCACGGTT.....................................................................................................................................251275.0027537350149801
..............................................................................................................................ATGGCACTGGAAGAATTCA..........................................................................................................................................191219.002192010007110
...............................................................................................................................TGGCACTGGAAGAATTCACGG.......................................................................................................................................211209.00209201021140
..............................................................................................................................ATGGCACTGGAAGAATTCACGGGT.....................................................................................................................................241184.001841612001470
.............................................................................................................................AATGGCACTGGAAGAATTCAA.........................................................................................................................................211163.00163819256870
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGG.....................................................................................................................................251150.0015037102364322
...............................................................................................................................TGGCACTGGAAGAATTCACG........................................................................................................................................201149.00149140010800
..............................................................................................................................ATGGCACTGGAAGAATTCACGGGA.....................................................................................................................................241103.0010392000650
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGAA....................................................................................................................................261102.001022213046300
.............................................................................................................................AATGGCACTGGAAGAATTCACGTT......................................................................................................................................241102.00102502647420
........................................................................................................................................................................CGTGATCTCTTAGTGGCATCT..............................................................................................21192.0092191121629150
................................................................................................................................GGCACTGGAAGAATTCACGGG......................................................................................................................................21191.00914120720516
.............................................................................................................................AATGGCACTGGAAGAATTCACC........................................................................................................................................22177.00771025531240
................................................................................................................................GGCACTGGAAGAATTCACGG.......................................................................................................................................20155.0055380001430
.............................................................................................................................AATGGCACTGGAAGAATTT...........................................................................................................................................19255.00110502067360
.............................................................................................................................AATGGCACTGGAAGAATTCACGGTA.....................................................................................................................................25154.0054301025241
..............................................................................................................................ATGGCACTGGAAGAATTCACGGT......................................................................................................................................23153.005348002120
.............................................................................................................................AATGGCACTGGAAGAATTCACGGGTA....................................................................................................................................26152.0052120103090
.............................................................................................................................AATGGCACTGGAAGAATTCAT.........................................................................................................................................21148.0048433020180
............................................................................................................................TAATGGCACTGGAAGAATTCACGGG......................................................................................................................................25147.004742300020
.............................................................................................................................AATGGCACTGGAAGAATTCT..........................................................................................................................................20145.004570312590
.................................................................................................................................GCACTGGAAGAATTCACGGG......................................................................................................................................20143.0043240021151
...................................................................................................................................ACTGGAAGAATTCACGGG......................................................................................................................................18143.0043801320110
.............................................................................................................................AATGGCACTGGAAGAATTCAG.........................................................................................................................................21134.003423110630
..............................................................................................................................ATGGCACTGGAAGAATTCACGT.......................................................................................................................................22133.003330000210
................................................................................................................................GGCACTGGAAGAATTCACG........................................................................................................................................19130.0030140001420
.............................................................................................................................AATGGCACTGGAAGAATTCACGCT......................................................................................................................................24129.0029000136100

Generated: 10/20/2015 at 11:47 PM