ID:

dgr-let-7-2

 Coordinate:

scaffold_15252:6428596-6428673 +

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

intergenic

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-33.6 -33.4

Flybase annnotation

pre_miRNA [Dgri\let-7-2-RM]; miRNA [Dgri\let-7-2-RA]

No Repeatable elements found

mature

  1. dgr-let-7-1  scaffold_3792:157-177 +
  2. dgr-let-7-2  scaffold_15252:6428606-6428626 +
star

  1. dgr-let-7-1  scaffold_3792:195-216 +
  2. dgr-let-7-2  scaffold_15252:6428644-6428665 +

Sense Strand Reads

AAAAACAAAAACCAGCAAGCAAAAAGGACTACACCAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTATCTATCTACCATACTATACAGCTTGCTAGCTTTCTTTGCTTGACTATAAGCAGCATAGAACGAAACCCTCTCACACACTGAAAAAAAAAACAC

*********************************************.....((.((((((..(((.((((((((((((((((((((......)))..))))))))))))))))).)))..)))))).)).......******************************************* 		Read size # Mismatch Hit Count Total Norm Total M041

female body

 V109

male body
............................................................TGAGGTAGTAGGTTGTATAGT................................................................................................. 21 0 2 16453.00 32906 18826 14080
............................................................TGAGGTAGTAGGTTGTATAG.................................................................................................. 20 0 2 10239.50 20479 13693 6786
............................................................TGAGGTAGTAGGTTGTATAGTA................................................................................................ 22 0 2 2998.00 5996 3361 2635
............................................................TGAGGTAGTAGGTTGTATAGTT................................................................................................ 22 1 2 1223.50 2447 1681 766
.............................................................GAGGTAGTAGGTTGTATAGT................................................................................................. 20 0 2 642.00 1284 1273 11
............................................................TGAGGTAGTAGGTTGTATA................................................................................................... 19 0 2 547.50 1095 606 489
.............................................................GAGGTAGTAGGTTGTATAG.................................................................................................. 19 0 2 446.00 892 888 4
............................................................TGAGGTAGTAGGTTGTATAGTAA............................................................................................... 23 1 2 336.00 672 135 537
............................................................TGAGGTAGTAGGTTGTATAGA................................................................................................. 21 1 2 287.00 574 209 365
............................................................TGAGGTAGTAGGTTGTATAGTAT............................................................................................... 23 1 2 239.00 478 207 271
............................................................TGAGGTAGTAGGTTGTAT.................................................................................................... 18 0 2 210.00 420 379 41
............................................................TGAGGTAGTAGGTTGTATAGTTT............................................................................................... 23 2 2 141.50 283 201 82
.............................................................GAGGTAGTAGGTTGTATAGTA................................................................................................ 21 0 2 118.00 236 233 3
............................................................TGAGGTAGTAGGTTGTATT................................................................................................... 19 1 2 81.00 162 89 73
............................................................TGAGGTAGTAGGTTGTACAGT................................................................................................. 21 1 2 73.50 147 4 143
............................................................TGAGGTAGTAGGTTGTAAAGT................................................................................................. 21 1 2 66.50 133 2 131
.............................................................GAGGTAGTAGGTTGTATAGTT................................................................................................ 21 1 2 61.00 122 122 0
............................................................TGAGGTAGTAGGTTGTATAA.................................................................................................. 20 1 2 56.00 112 22 90
............................................................TGAGGCAGTAGGTTGTATAGT................................................................................................. 21 1 2 49.00 98 14 84
..............................................................AGGTAGTAGGTTGTATAGT................................................................................................. 19 0 2 38.00 76 75 1
............................................................TGAGGTAGTAGGTTGTAGAGT................................................................................................. 21 1 2 36.50 73 0 73
............................................................TGAGGTAGTAGGTTGTACAG.................................................................................................. 20 1 2 35.50 71 1 70
............................................................TGCGGTAGTAGGTTGTATAGT................................................................................................. 21 1 2 33.00 66 0 66
..................................................................................................CTATACAGCTTGCTAGCTTTCT.......................................................... 22 0 2 33.00 66 63 3
............................................................TGAGGTAGTAGGTTGTAAAG.................................................................................................. 20 1 2 32.50 65 0 65
............................................................TGAGGAAGTAGGTTGTATAGT................................................................................................. 21 1 2 30.50 61 5 56
............................................................TGAGGTAGTAGGTTGTATAGTAAA.............................................................................................. 24 2 2 28.50 57 6 51
............................................................TGAGGTAGTAGGTTGTATAT.................................................................................................. 20 1 2 28.50 57 18 39
............................................................TGAGGTAGCAGGTTGTATAGT................................................................................................. 21 1 2 27.50 55 0 55
............................................................TGAGGCAGTAGGTTGTATAG.................................................................................................. 20 1 2 27.50 55 9 46
............................................................TGAGGGAGTAGGTTGTATAGT................................................................................................. 21 1 2 25.00 50 7 43
............................................................TGAGGTCGTAGGTTGTATAGT................................................................................................. 21 1 2 25.00 50 0 50
...........................................................CTGAGGTAGTAGGTTGTATAGT................................................................................................. 22 1 2 23.50 47 37 10
............................................................TGAGGTAGTAGGTTGTATAGTG................................................................................................ 22 1 2 22.00 44 33 11
............................................................TGAGGTAGTAGGTTGTATAGTTTT.............................................................................................. 24 2 2 21.00 42 34 8
............................................................TGAGGTAGTAGGTTGTATAGC................................................................................................. 21 1 2 20.50 41 16 25
............................................................TGGGGTAGTAGGTTGTATAGT................................................................................................. 21 1 2 20.00 40 11 29
............................................................TGAGGTAGAAGGTTGTATAGT................................................................................................. 21 1 2 19.00 38 2 36
............................................................TGAGGTAGTAGGTTGTAGAG.................................................................................................. 20 1 2 19.00 38 0 38
............................................................TGAGGTAGTAGGTTGTATAGTC................................................................................................ 22 1 2 18.50 37 11 26
............................................................TGAGGTAGTAGGTTGTATAGG................................................................................................. 21 1 2 18.00 36 32 4
.............................................................GAGGTAGTAGGTTGTATA................................................................................................... 18 0 2 16.00 32 32 0
............................................................TGAGGTAGTAGGTTGTACAGTA................................................................................................ 22 1 2 15.50 31 0 31
..............................................................AGGTAGTAGGTTGTATAG.................................................................................................. 18 0 2 15.50 31 31 0
............................................................TGAGGTAGCAGGTTGTATAG.................................................................................................. 20 1 2 15.50 31 4 27
............................................................TGAGGGAGTAGGTTGTATAG.................................................................................................. 20 1 2 15.00 30 11 19
............................................................TGCGGTAGTAGGTTGTATAG.................................................................................................. 20 1 2 15.00 30 0 30
............................................................TGAGGTAGTAGGTTGTATTT.................................................................................................. 20 2 2 15.00 30 17 13
...........................................................CTGAGGTAGTAGGTTGTATAG.................................................................................................. 21 1 2 14.50 29 24 5
............................................................TGAGGAAGTAGGTTGTATAG.................................................................................................. 20 1 2 14.50 29 6 23
...............................................................GGTAGTAGGTTGTATAGT................................................................................................. 18 0 2 14.50 29 29 0
............................................................TGAGGTAGTAGGTTGTAAAGTA................................................................................................ 22 1 2 12.50 25 0 25
............................................................TGTGGTAGTAGGTTGTATAGT................................................................................................. 21 1 2 12.50 25 0 25
............................................................TGAGGTCGTAGGTTGTATAG.................................................................................................. 20 1 2 12.00 24 0 24
............................................................TGAGGTAGTAGGCTGTATAGT................................................................................................. 21 1 2 12.00 24 5 19
............................................................TGATGTAGTAGGTTGTATAGT................................................................................................. 21 1 2 11.50 23 11 12
............................................................TGAGGTAGTAGGTTGCATAGT................................................................................................. 21 1 2 11.00 22 3 19
............................................................TGAGGTAGTAGTTTGTATAGT................................................................................................. 21 1 2 11.00 22 6 16
...........................................................TTGAGGTAGTAGGTTGTATAGT................................................................................................. 22 0 2 11.00 22 22 0
............................................................TGAGGTTGTAGGTTGTATAGT................................................................................................. 21 1 2 10.50 21 0 21
............................................................TGACGTAGTAGGTTGTATAGT................................................................................................. 21 1 2 10.50 21 3 18
............................................................TGAGGTGGTAGGTTGTATAGT................................................................................................. 21 1 2 10.50 21 4 17
............................................................TGGGGTAGTAGGTTGTATAG.................................................................................................. 20 1 2 10.00 20 7 13
............................................................TGAGGTAGTAGGTTGTATAGTAC............................................................................................... 23 1 2 10.00 20 7 13
............................................................TGAGGTACTAGGTTGTATAGT................................................................................................. 21 1 2 9.50 19 3 16
............................................................TGAGGTAGTAGGTTGTAGAGTA................................................................................................ 22 1 2 9.50 19 0 19
...........................................................TTGAGGTAGTAGGTTGTATAG.................................................................................................. 21 0 2 9.50 19 19 0
............................................................TGAGGCAGTAGGTTGTATAGTA................................................................................................ 22 1 2 9.50 19 1 18
............................................................TGAGGTAGAAGGTTGTATAG.................................................................................................. 20 1 2 9.00 18 3 15
............................................................TGAGGTAGTAGGTTTTATAGT................................................................................................. 21 1 2 9.00 18 9 9
............................................................TTAGGTAGTAGGTTGTATAGT................................................................................................. 21 1 2 9.00 18 10 8
............................................................TGAGGTAGCAGGTTGTATAGTA................................................................................................ 22 1 2 8.50 17 2 15
............................................................TGAGGTAGTAGGTTGTATAGAT................................................................................................ 22 2 2 8.50 17 5 12
............................................................TGAGGTAGTAGGTTGTATAGTTA............................................................................................... 23 2 2 8.50 17 11 6
............................................................TGAGGTAGTAGCTTGTATAGT................................................................................................. 21 1 2 8.50 17 1 16
............................................................TGAGGAAGTAGGTTGTATAGTA................................................................................................ 22 1 2 8.50 17 0 17
............................................................TGATGTAGTAGGTTGTATAG.................................................................................................. 20 1 2 8.00 16 10 6
.............................................................GAGGTAGTAGGTTGTATAGTAT............................................................................................... 22 1 2 8.00 16 16 0
.............................................................GAGGTAGTAGGTTGTATAGTTT............................................................................................... 22 2 2 8.00 16 16 0
............................................................TGAGGTATTAGGTTGTATAG.................................................................................................. 20 1 2 8.00 16 9 7
............................................................TGTGGTAGTAGGTTGTATAG.................................................................................................. 20 1 2 7.50 15 1 14
.............................................................GAGGTAGTAGGTTGTATAGA................................................................................................. 20 1 2 7.50 15 14 1
............................................................TGAGGTATTAGGTTGTATAGT................................................................................................. 21 1 2 7.50 15 5 10
............................................................TGAGGTAGTAGGTTCTATAGT................................................................................................. 21 1 2 7.00 14 2 12
............................................................TGAGGTAGTAGGTTGTATAGAA................................................................................................ 22 1 2 7.00 14 6 8
............................................................TGAGGTAGTAGGTTGTATGGT................................................................................................. 21 1 2 7.00 14 3 11
...........................................................GTGAGGTAGTAGGTTGTATAG.................................................................................................. 21 1 2 7.00 14 14 0
............................................................TGAGGTAGTAGGTTGTATACT................................................................................................. 21 1 2 7.00 14 2 12
............................................................TGAGGTGGTAGGTTGTATAG.................................................................................................. 20 1 2 7.00 14 2 12
............................................................TGAGGTAGTGGGTTGTATAGT................................................................................................. 21 1 2 7.00 14 8 6
............................................................TGAGGTAGTATGTTGTATAG.................................................................................................. 20 1 2 6.50 13 5 8
............................................................TGAGGTAGTAGGTTGTCTAGT................................................................................................. 21 1 2 6.50 13 0 13
............................................................TGAGGTAGTAGGTTGTATCGT................................................................................................. 21 1 2 6.50 13 0 13
............................................................TGAGGTAGTAGGTTGTATAAA................................................................................................. 21 2 2 6.50 13 3 10
............................................................TGCGGTAGTAGGTTGTATAGTA................................................................................................ 22 1 2 6.50 13 0 13
............................................................TGAGGTAGTACGTTGTATAG.................................................................................................. 20 1 2 6.50 13 4 9
............................................................TGAGGTTGTAGGTTGTATAG.................................................................................................. 20 1 2 6.50 13 0 13
............................................................TGAGGTAGTAGGCTGTATAG.................................................................................................. 20 1 2 6.00 12 1 11
............................................................TGAGGTAGTAGGTTGCATAG.................................................................................................. 20 1 2 6.00 12 3 9
............................................................TGAGGTAGGAGGTTGTATAGT................................................................................................. 21 1 2 6.00 12 2 10
...........................................................GTGAGGTAGTAGGTTGTATAGT................................................................................................. 22 1 2 5.50 11 11 0
...........................................................ATGAGGTAGTAGGTTGTATAG.................................................................................................. 21 1 2 5.50 11 11 0
............................................................TGAGGTAGTAGGTTATATAGT................................................................................................. 21 1 2 5.50 11 4 7
............................................................TCAGGTAGTAGGTTGTATAGT................................................................................................. 21 1 2 5.50 11 5 6
............................................................TGAGCTAGTAGGTTGTATAG.................................................................................................. 20 1 2 5.00 10 2 8
............................................................TGAGGTAGTACGTTGTATAGT................................................................................................. 21 1 2 5.00 10 2 8
............................................................TGAGGGAGTAGGTTGTATAGTA................................................................................................ 22 1 2 5.00 10 4 6
............................................................TGAGGTACTAGGTTGTATAG.................................................................................................. 20 1 2 5.00 10 4 6
...........................................................CTGAGGTAGTAGGTTGTATAGTA................................................................................................ 23 1 2 5.00 10 6 4
............................................................TGAGGTAGTAGGTTGTCTAG.................................................................................................. 20 1 2 4.50 9 0 9
............................................................TGAGGTCGTAGGTTGTATAGTAA............................................................................................... 23 2 2 4.50 9 0 9
............................................................TGAGATAGTAGGTTGTATAGT................................................................................................. 21 1 2 4.50 9 2 7
............................................................TGAGGTAGTAGGTCGTATAGT................................................................................................. 21 1 2 4.50 9 1 8
............................................................TGAGGTAGTAGTTTGTATAG.................................................................................................. 20 1 2 4.50 9 3 6
............................................................CGAGGTAGTAGGTTGTATAG.................................................................................................. 20 1 2 4.50 9 5 4
............................................................TGAGGTAATAGGTTGTATAGT................................................................................................. 21 1 2 4.50 9 4 5
..................................................................................................CTATACAGCTTGCTAGCTTTC........................................................... 21 0 2 4.50 9 9 0
............................................................TGAGGTAGTAAGTTGTATAGT................................................................................................. 21 1 2 4.50 9 1 8
............................................................TGAGGCAGTAGGTTGTATAGTT................................................................................................ 22 2 2 4.50 9 4 5
............................................................TGAGGTAGTAGGTTGTATATT................................................................................................. 21 1 2 4.50 9 3 6
............................................................TGAGGTAGTAGGTTGTGTAGT................................................................................................. 21 1 2 4.50 9 3 6
............................................................AGAGGTAGTAGGTTGTATAGT................................................................................................. 21 1 2 4.50 9 6 3
............................................................TGAGGTAGTAGGTTGTACAGTAA............................................................................................... 23 2 2 4.50 9 0 9
............................................................TGAGGTCGTAGGTTGTATAGTA................................................................................................ 22 1 2 4.00 8 0 8
............................................................TGAGGTAGTAGGTTCTATAG.................................................................................................. 20 1 2 4.00 8 2 6
............................................................TGAGGTAGTAGGTTGTATAGTAG............................................................................................... 23 0 2 4.00 8 6 2
...........................................................ATGAGGTAGTAGGTTGTATAGT................................................................................................. 22 1 2 4.00 8 8 0
............................................................TGAGGTAGTAGGTTGTATC................................................................................................... 19 1 2 4.00 8 1 7
............................................................TGAGGTAGTAGGTTGTATAGTTTTT............................................................................................. 25 3 2 4.00 8 4 4
............................................................TGAGGTAGTAGGTTTTATAG.................................................................................................. 20 1 2 4.00 8 4 4
............................................................TGAGGTAGAAGGTTGTATAGTA................................................................................................ 22 1 2 4.00 8 1 7
.............................................................GAGGTAGTAGGTTGTATAGTAA............................................................................................... 22 1 2 4.00 8 8 0
............................................................TGAGGTAGTAGGTTGTATAC.................................................................................................. 20 1 2 4.00 8 2 6
............................................................TGAGGTAGTCGGTTGTATAG.................................................................................................. 20 1 2 3.50 7 0 7
............................................................TGAGGTAGTAGGTTATATAG.................................................................................................. 20 1 2 3.50 7 2 5
............................................................TGAGCTAGTAGGTTGTATAGT................................................................................................. 21 1 2 3.50 7 1 6
............................................................TGACGTAGTAGGTTGTATAG.................................................................................................. 20 1 2 3.50 7 2 5
.............................................................TAGGTAGTAGGTTGTATAGT................................................................................................. 20 1 2 3.50 7 5 2
............................................................TTAGGTAGTAGGTTGTATAG.................................................................................................. 20 1 2 3.50 7 3 4
.............................................................GAGGTAGTAGGTTGTATT................................................................................................... 18 1 2 3.50 7 7 0
............................................................TGAGGTAGTAGGTTGTATAGTTG............................................................................................... 23 1 2 3.50 7 7 0
............................................................TGAGGTAGTAGGTTGTACA................................................................................................... 19 1 2 3.50 7 0 7
............................................................TGAGGTAGTGGGTTGTATAG.................................................................................................. 20 1 2 3.50 7 4 3
............................................................TGAGGTAGTAGGTTGTATAGTGG............................................................................................... 23 1 2 3.50 7 7 0
............................................................CGAGGTAGTAGGTTGTATAGT................................................................................................. 21 1 2 3.50 7 2 5
...........................................................ATGAGGTAGTAGGTTGTATAGTA................................................................................................ 23 1 2 3.50 7 7 0
............................................................TCAGGTAGTAGGTTGTATAG.................................................................................................. 20 1 2 3.50 7 3 4
............................................................TGGGGTAGTAGGTTGTATAGTA................................................................................................ 22 1 2 3.50 7 0 7
............................................................TGAGGTAGTAAGTTGTATAG.................................................................................................. 20 1 2 3.00 6 2 4
............................................................TGAGGTAGTAGGTTGTACAGTT................................................................................................ 22 2 2 3.00 6 0 6
............................................................TGAGATAGTAGGTTGTATAG.................................................................................................. 20 1 2 3.00 6 1 5
............................................................TGAGGTAGTAGGTTGTATCG.................................................................................................. 20 1 2 3.00 6 0 6
............................................................TGAGGTAGTAGGTTGTATAGTTAA.............................................................................................. 24 3 2 3.00 6 2 4
............................................................TGAGGTAGTATGTTGTATAGT................................................................................................. 21 1 2 3.00 6 3 3
............................................................TGAGGTAGTAGGTCGTATAG.................................................................................................. 20 1 2 3.00 6 1 5
..............................................................AGGTAGTAGGTTGTATAGTA................................................................................................ 20 0 2 3.00 6 6 0
............................................................TGAGGTAGTAGGTTGTATAAT................................................................................................. 21 1 2 3.00 6 0 6
............................................................TGAGGTAGGAGGTTGTATAG.................................................................................................. 20 1 2 3.00 6 1 5
............................................................TGAGGTAGTAGGTTGTATAGTATT.............................................................................................. 24 1 2 3.00 6 3 3
............................................................TGAGGTAGTTGGTTGTATAGT................................................................................................. 21 1 2 2.50 5 4 1
............................................................TGAGGTAGTAGGTTGTATAGTTC............................................................................................... 23 2 2 2.50 5 3 2
............................................................TGAGGTAGTAGGTTGTATAGCA................................................................................................ 22 1 2 2.50 5 1 4
............................................................TGAGGTAGTAGGTTGTAAAGTT................................................................................................ 22 2 2 2.50 5 0 5
............................................................TGAGGTAGTAGGTTGTATACTA................................................................................................ 22 1 2 2.50 5 1 4
............................................................TTAGGTAGTAGGTTGTATAGTA................................................................................................ 22 1 2 2.50 5 2 3
..............................................................AGGTAGTAGGTTGTATAGTT................................................................................................ 20 1 2 2.50 5 5 0
............................................................TGAGGTAGTAGGTTGTATAGGC................................................................................................ 22 2 2 2.50 5 5 0
............................................................GGAGGTAGTAGGTTGTATAGT................................................................................................. 21 1 2 2.50 5 5 0
............................................................TGAGGTAGTAGCTTGTATAG.................................................................................................. 20 1 2 2.50 5 2 3
............................................................TGAGGTAGTAGGTTGAATAGT................................................................................................. 21 1 2 2.50 5 5 0
............................................................GGAGGTAGTAGGTTGTATAG.................................................................................................. 20 1 2 2.50 5 5 0
............................................................TGAGGTAGTAGGTTGTATGG.................................................................................................. 20 1 2 2.50 5 3 2
............................................................TAAGGTAGTAGGTTGTATAGT................................................................................................. 21 1 2 2.50 5 0 5
............................................................TGACGTAGTAGGTTGTATAGTA................................................................................................ 22 1 2 2.50 5 0 5
............................................................TGAGGTAGTAGGTTGTATAGTTGG.............................................................................................. 24 2 2 2.50 5 5 0
............................................................TGTGGTAGTAGGTTGTATAGTA................................................................................................ 22 1 2 2.00 4 0 4
............................................................TGATGTAGTAGGTTGTATAGTA................................................................................................ 22 1 2 2.00 4 1 3
...........................................................TTGAGGTAGTAGGTTGTATAGTA................................................................................................ 23 0 2 2.00 4 4 0
...............................................................TGTAGTAGGTTGTATAGT................................................................................................. 18 1 2 2.00 4 0 4
............................................................TGAGGTAGTAGGTTGTATAGTACA.............................................................................................. 24 2 2 2.00 4 1 3
............................................................TGAGGTAGTAGGTTGTATGGTA................................................................................................ 22 1 2 2.00 4 2 2
............................................................TGAGGTAGTAGGTTGTAAAGA................................................................................................. 21 2 2 2.00 4 0 4
............................................................TGAGGTCGTAGGTTGTATAGTT................................................................................................ 22 2 2 2.00 4 0 4
............................................................TGAGGGAGTAGGTTGTATAGTT................................................................................................ 22 2 2 2.00 4 1 3
............................................................TGAAGTAGTAGGTTGTATAGT................................................................................................. 21 1 2 2.00 4 1 3
............................................................TGAGGTAGTGGGTTGTATAGTT................................................................................................ 22 2 2 2.00 4 3 1
............................................................TGAGGTAGTAGGTTGTAGAGTAT............................................................................................... 23 2 2 2.00 4 0 4
............................................................TGAGGTAGTAGGTTGTACAGA................................................................................................. 21 2 2 2.00 4 0 4
............................................................TGAGGTAGTAGATTGTATAGT................................................................................................. 21 1 2 2.00 4 1 3
............................................................TGAGGTAGTAGGGTGTATAGT................................................................................................. 21 1 2 2.00 4 1 3
............................................................TGAGGTAATAGGTTGTATAG.................................................................................................. 20 1 2 2.00 4 2 2
............................................................TGAAGTAGTAGGTTGTATAG.................................................................................................. 20 1 3 2.00 6 1 5
...................................................................................................TATACAGCTTGCTAGCTTTCT.......................................................... 21 0 2 2.00 4 4 0
............................................................TGAGGTAGTAGGTTGTAGT................................................................................................... 19 2 2 2.00 4 0 4
..........................................................ATTGAGGTAGTAGGTTGTATAGT................................................................................................. 23 0 2 2.00 4 4 0
.............................................................GATGTAGTAGGTTGTATAGT................................................................................................. 20 1 2 2.00 4 4 0
............................................................TGAGGAAGTAGGTTGTATAGTT................................................................................................ 22 2 2 2.00 4 0 4
............................................................TGAGGTAGTAGGTTGTATTTT................................................................................................. 21 2 2 2.00 4 1 3
............................................................TGAGGTAGTAGGTTGTTTAGT................................................................................................. 21 1 2 2.00 4 0 4
............................................................TGAGGTAGTCGGTTGTATAGT................................................................................................. 21 1 2 2.00 4 0 4
............................................................TGAGGTAGTAGGTTGTAAA................................................................................................... 19 1 2 2.00 4 1 3
.............................................................GAGGTAGTAGGTTGTATAGTG................................................................................................ 21 1 2 1.50 3 3 0
............................................................TGAGGTAGTAGGTTGTATTG.................................................................................................. 20 1 2 1.50 3 1 2
............................................................TGAGGTAGTAGGTTGTATAGTGA............................................................................................... 23 2 2 1.50 3 1 2
............................................................TGAGGTAGTAGGTTGTATAGTCA............................................................................................... 23 2 2 1.50 3 1 2
............................................................TGAGGTAGTAGGTTGTATAGTAAT.............................................................................................. 24 1 2 1.50 3 2 1
..........................................................TCTGAGGTAGTAGGTTGTATAGT................................................................................................. 23 2 2 1.50 3 2 1
............................................................TGAGGTAGTAGATTGTATAG.................................................................................................. 20 1 2 1.50 3 1 2
............................................................TGAGGTAGTAGGTTGTATAGGG................................................................................................ 22 2 2 1.50 3 3 0
............................................................TGAGTTAGTAGGTTGTATAGTA................................................................................................ 22 1 2 1.50 3 2 1
............................................................TGAGGCAGTAGGTTGTATAGA................................................................................................. 21 2 2 1.50 3 0 3
............................................................TGAGGTAGTAGGTTGTAAAA.................................................................................................. 20 2 2 1.50 3 0 3
.............................................................GAGGTAGCAGGTTGTATAGT................................................................................................. 20 1 2 1.50 3 3 0
............................................................TGAGGTAGTTGGTTGTATAG.................................................................................................. 20 1 2 1.50 3 1 2
............................................................TGAGGTGGTAGGTTGTATAGTA................................................................................................ 22 1 2 1.50 3 1 2
............................................................TGAGGTAGTCGGTTGTATAGTA................................................................................................ 22 1 2 1.50 3 0 3
............................................................TGAGGTAGTAGGTTGTAGAGTAA............................................................................................... 23 2 2 1.50 3 0 3
............................................................TGCGGTAGTAGGTTGTATAGTAA............................................................................................... 23 2 2 1.50 3 0 3
............................................................TGAGGTAGTAGGTTTTATAGTA................................................................................................ 22 1 2 1.50 3 3 0
............................................................TGAGGTAGGAGGTTGTATAGTA................................................................................................ 22 1 2 1.50 3 0 3
............................................................TGAGTTAGTAGGTTGTATAGT................................................................................................. 21 1 2 1.50 3 1 2
............................................................TGAGGTAGTAGGTTGTAGA................................................................................................... 19 1 2 1.50 3 0 3
.............................................................GAGGTAGTAGGTTGTATAT.................................................................................................. 19 1 2 1.50 3 3 0
............................................................TGAGATAGTAGGTTGTATAGTA................................................................................................ 22 1 2 1.50 3 0 3
............................................................TGAGGTAGTAGGTTGTAGAGTT................................................................................................ 22 2 2 1.50 3 0 3
............................................................TGAGGTAGTAGATTGTATAGTA................................................................................................ 22 1 2 1.50 3 2 1
............................................................TGAGGTAGTAGGTTGTATATTA................................................................................................ 22 1 2 1.50 3 2 1
............................................................TGAGGTAGTAGGTTGTATTA.................................................................................................. 20 2 2 1.50 3 1 2
............................................................TGAGGTAGTAGGTTGTATAGGCA............................................................................................... 23 3 2 1.50 3 3 0
............................................................TGAGGTAGTAGGTTGTGTAG.................................................................................................. 20 1 2 1.50 3 0 3
..........................................................GATGAGGTAGTAGGTTGTATAGT................................................................................................. 23 2 2 1.50 3 3 0
............................................................TGAGGTAGTAGGTTGTATAGTCT............................................................................................... 23 2 2 1.50 3 3 0
..........................................................GTTGAGGTAGTAGGTTGTATAGT................................................................................................. 23 1 2 1.50 3 3 0
............................................................TGAGGCAGTAGGTTGTATA................................................................................................... 19 1 2 1.50 3 0 3
.............................................................GAGGGAGTAGGTTGTATAGT................................................................................................. 20 1 2 1.50 3 3 0
............................................................TGAGGTAGTAGGTTGCATAGTA................................................................................................ 22 1 2 1.00 2 0 2
............................................................TGAGGCAGTAGGTTGTATAGTAA............................................................................................... 23 2 2 1.00 2 0 2
.............................................................TAGGTAGTAGGTTGTATAG.................................................................................................. 19 1 2 1.00 2 2 0
............................................................TGAGGTAGTAGGTTGGATAG.................................................................................................. 20 1 2 1.00 2 2 0
............................................................TGAGTTAGTAGGTTGTATAG.................................................................................................. 20 1 2 1.00 2 1 1
............................................................TGAGGTAGTAGGTTGTTTAG.................................................................................................. 20 1 2 1.00 2 1 1
............................................................TGAGGTCGTAGGTTGTATAGTAT............................................................................................... 23 2 2 1.00 2 0 2
............................................................AGAGGTAGTAGGTTGTATAG.................................................................................................. 20 1 2 1.00 2 2 0
............................................................TGAGGTAGTAGGTTGTAGAGA................................................................................................. 21 2 2 1.00 2 0 2
............................................................TAAGGTAGTAGGTTGTATAGTA................................................................................................ 22 1 2 1.00 2 0 2
..............................................................TGGTAGTAGGTTGTATAG.................................................................................................. 18 1 2 1.00 2 0 2
..........................................................CTTGAGGTAGTAGGTTGTATAG.................................................................................................. 22 1 2 1.00 2 2 0
..................................................................................................CTATACAGCTTGCTAGCT.............................................................. 18 0 2 1.00 2 2 0
............................................................TGAGGTAGTAGGTTGTAAAGTAT............................................................................................... 23 2 2 1.00 2 0 2
............................................................TGAGGTAGTACGTTGTATAGTAA............................................................................................... 23 2 2 1.00 2 0 2
............................................................TGAGGTAGTAGGTTGCATAGTT................................................................................................ 22 2 3 1.00 3 1 2
............................................................TGAGGTAGTAGGTTGAATAGTA................................................................................................ 22 1 2 1.00 2 1 1
............................................................TGAGGTAGTAGGTTGTATCC.................................................................................................. 20 2 2 1.00 2 0 2
............................................................TGAGGTAGTAGGTTGTATG................................................................................................... 19 1 2 1.00 2 0 2
............................................................TGAGGTAGTAGGTTGTATAAAAA............................................................................................... 23 3 2 1.00 2 0 2
.............................................................GAGGTACTAGGTTGTATAG.................................................................................................. 19 1 2 1.00 2 1 1
............................................................TGAGGTAGTGGGTTGTAT.................................................................................................... 18 1 2 1.00 2 2 0
............................................................TGAGGTAGTAGGTTGTATAGGTG............................................................................................... 23 2 2 1.00 2 2 0
.............................................................GAGGTATTAGGTTGTATAG.................................................................................................. 19 1 2 1.00 2 2 0
............................................................TGAGGTAGTAGGTTGTAGAGTTT............................................................................................... 23 3 2 1.00 2 0 2
............................................................TGAGGTAGTAGGTTGTAAAGTAA............................................................................................... 23 2 2 1.00 2 0 2
...............................................................GGTAGTAGGTTGTATAGTA................................................................................................ 19 0 2 1.00 2 2 0
............................................................TGAGGTAGTAGGATGTATAGT................................................................................................. 21 1 2 1.00 2 0 2
............................................................TGAGGTAGTAGGTCGTATAGTA................................................................................................ 22 1 2 1.00 2 0 2
..............................................................TGGTAGTAGGTTGTATAGT................................................................................................. 19 1 2 1.00 2 1 1
............................................................TGAGGTAGCAGGTTGTATA................................................................................................... 19 1 2 1.00 2 0 2
............................................................TGAGGTAGTAGGTCGTATAGTAA............................................................................................... 23 2 2 1.00 2 0 2
...........................................................CTGAGGTAGTAGGTTGTATAGTTT............................................................................................... 24 3 2 1.00 2 1 1
............................................................TGAGGTAGTAGATTGTATAGTAA............................................................................................... 23 2 2 1.00 2 0 2
............................................................TGAGGTAGTAGCTTGTATAGTAT............................................................................................... 23 2 2 1.00 2 1 1
............................................................TGAGGTAGCAGGTTGTATAGTAT............................................................................................... 23 2 2 1.00 2 1 1
............................................................TGAGTTAGTAGGTTGTATA................................................................................................... 19 1 2 1.00 2 0 2
............................................................TGAGGTAGTAGGTTGTAGAGTC................................................................................................ 22 2 2 1.00 2 0 2
............................................................TGAGGTAGTAGGTTGTATAGTTAT.............................................................................................. 24 2 2 1.00 2 1 1
............................................................TGAGGTAGTAGGATGTATAG.................................................................................................. 20 1 2 1.00 2 1 1
............................................................TCTGGTAGTAGGTTGTATAGT................................................................................................. 21 2 2 1.00 2 0 2
.............................................................TAGGTAGTAGGTTGTATAGTA................................................................................................ 21 1 2 1.00 2 1 1
.........................................................AACTGAGGTAGTAGGTTGTATAGT................................................................................................. 24 1 2 1.00 2 2 0
...........................................................CTGAGGTAGTAGGTTGTATA................................................................................................... 20 1 2 1.00 2 2 0
.............................................................GAGGAAGTAGGTTGTATAGT................................................................................................. 20 1 2 1.00 2 2 0
............................................................TGAGGTAGTAGGTTTTATAGTT................................................................................................ 22 2 2 1.00 2 1 1
............................................................TGAGGAAGTAGGTTGTATAGTAA............................................................................................... 23 2 2 1.00 2 0 2
.............................................................GAGGTGGTAGGTTGTATAGT................................................................................................. 20 1 2 1.00 2 2 0
.............................................................CAGGTAGTAGGTTGTATAGT................................................................................................. 20 1 2 1.00 2 2 0
.............................................................GAGGTAGTAGGTTGTATAGTGG............................................................................................... 22 1 2 1.00 2 2 0
............................................................TGAGGTAGTAGCTTGTATAGTA................................................................................................ 22 1 2 1.00 2 0 2
............................................................TGAGGTAGTGGGTTGTATAGTA................................................................................................ 22 1 2 1.00 2 1 1
............................................................TGAGGTAGTAGGTTGTATATG................................................................................................. 21 2 2 1.00 2 2 0
............................................................TGAGGTAGTAGGTTGTATTGT................................................................................................. 21 1 2 1.00 2 0 2
............................................................TGAGGTAGTAGGTTGTATCGTA................................................................................................ 22 1 2 1.00 2 0 2
............................................................TGAGGTAGTCGGTTGTATAGTT................................................................................................ 22 2 2 1.00 2 0 2
............................................................TGAGGTAGTAGGTTGTACAA.................................................................................................. 20 2 2 1.00 2 0 2
...........................................................ATGAGGTAGTAGGTTGTATA................................................................................................... 20 1 2 1.00 2 2 0
............................................................TGAGGTAGTAGGTTGTATACTAA............................................................................................... 23 2 2 1.00 2 0 2
............................................................TGAGGTAGTAGGTTTTATA................................................................................................... 19 1 2 1.00 2 0 2
............................................................TGAGGTAGTAGGTTGTATAGGGA............................................................................................... 23 3 2 1.00 2 2 0
............................................................TGCGGTAGTAGGTTGTATAGTT................................................................................................ 22 2 2 1.00 2 0 2
...........................................................GTGAGGTAGTAGGTTGTATAGTA................................................................................................ 23 1 2 1.00 2 2 0
.............................................................GAGGTAGTAGGTTGTATAGTAG............................................................................................... 22 0 2 1.00 2 2 0
.........................................................TACTGAGGTAGTAGGTTGTATAGT................................................................................................. 24 2 2 1.00 2 2 0
............................................................TGTGGTAGTAGGTTGTATAGA................................................................................................. 21 2 2 1.00 2 0 2

Anti-sense strand reads

TTTTTGTTTTTGGTCGTTCGTTTTTCCTGATGTGGTTCCTGGAAAAAGAGAGACCGTTTAACTCCATCATCCAACATATCATCATAGATAGATGGTATGATATGTCGAACGATCGAAAGAAACGAACTGATATTCGTCGTATCTTGCTTTGGGAGAGTGTGTGACTTTTTTTTTTGTG

*******************************************.....((.((((((..(((.((((((((((((((((((((......)))..))))))))))))))))).)))..)))))).)).......********************************************* 		Read size # Mismatch Hit Count Total Norm Total

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droGri2 scaffold_15252:6428546-6428723 + dgr-let-7-2 Known_mirbase AA---------------------AAACAAAA--A-CCAGCAA---------GCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTATCTATC-TACCATACTATACAGCTTGCTAGCTTTCTTTGCTTGACTATAAGCAGCAT-AGA-ACGAAA-C--------C-----CT-------------------CT-CACACACTGAAAAAAAAAACA---C
droVir3 scaffold_12963:18451299-18451494 + dvi-let-7 Known_mirbase AA---------------------CAGC---------AGGCAAGCTAAAAGGACAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTATTTATA-GAGCATACTATACAGCGTGCTAGCTTTCTTTGCTTGACAATAAGCCGCAAAGAAAACCAAC-CCCCCCATCCCT---CTCTACACACACACACACACACA-CAC--AC-----------------A
droMoj3 scaffold_6500:6184551-6184708 - dmo-let-7 Known_mirbase AC---------------------TGACATAA--ACCAAGCAA---------GCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTACTTATA-GACCATACTATACAGCGTGCTAGCTTTCTTTGCTTGACTATAAGCCGCAA---------AGAC-----A----T---CC-------------------CA-CAC--AC-----------------A
droWil2 scf2_1100000004521:11623100-11623240 + dwi-let-7 Known_mirbase TA---------------------AAACCTCA--A-TTAA-AT---------GCAAAAAGGACTA-CTTAAAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTATTCAATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTATAAGCCACA-----------------------------------------------------------------------------
dp5 4_group3:3635607-3635775 + dps-let-7 Known_mirbase CA---------------------AACCATAA------GCCCA---------ACAAAAAGGACCAGCACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTACTT-CA-GATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACTATAAGCCTCATTTGA-ACAGCC-C--------A-GCCCCC-------------------CGCCCCAAACAG---------------C
droPer2 scaffold_1:5116186-5116356 + dpe-let-7-1 Known_mirbase CA---------------------AACCATAA------GCCCA---------ACAAAAAGGACCAGCACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTACTT-CA-GATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACTATAAGCCTCATTTGA-ACAGCC-C--------A-GCCCCC-------------------CGCCCCGAACAG----------CT---C
droAna3 scaffold_12916:2379140-2379291 + dan-let-7 Known_mirbase AA---------------------------------CCACCCA---------GCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGCAACTAAG-AATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACAATAAGCCGCATTTGA-TTTGAAAA----------T---CC-------------------CC-C-------------------C---C
droBip1 scf7180000396430:324830-324990 + AA---------------------------------CCACCCA---------GCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGCAACTAAG-AATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACAATAAGCCGCATTTGA-TTTCAA-A--------TAT-TCCC-------------------CA-ATGGA---G----------TT---C
droKik1 scf7180000302401:71719-71871 - AA---------------------AAT---------CCACCCA---------GCAAAAGGGACTA-AACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCAATTTAATCCAAGAA----------A---C------------------------------------------CA---C
droFic1 scf7180000454059:475749-475919 - AA---------------------AAACCAAA----CCACCCA---------GCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCAATTGA-TTAAAA-C--------T-----CC-------------------CA-ATCGAACTT----------CACCGC
droEle1 scf7180000491338:2439441-2439611 + TA---------------------AAACCAAACCA-CCACCCA---------GCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACT-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCAATTGC-TTTAAA-C--------T-----CC-------------------CT-ATCGATCTG----------CA---C
droRho1 scf7180000780227:12574-12744 + AA---------------------AAACCAAACCA-CCACCCA---------GCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCAATTGA-TTAAAA-C--------T-----CC-------------------CA-ATCGAAGTG----------CA---C
droBia1 scf7180000302422:5215511-5215670 - CA---------------------A------A----CCACCCA---------GCAAAAAGGACT--CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCACAATTGA-TTTAAA-C--------T-----CC-------------------CA-ATC-AGCTG----------CA---C
droTak1 scf7180000415867:746912-747066 + --------------------------------------CCCA---------GCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCAATTGA-TTAAAA-C--------T-----CC-------------------CA-ATCGAATTG----------CA---C
droEug1 scf7180000409447:414616-414782 + AA---------------------A-ACCAAA----CCACCCA---------GCAAAAAGGACTA-CACT-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTATTAGCCGCAATTGA-TTTAAA-C--------T-----CC-------------------CA-ATCGAACTG----------CA---C
dm3 chr2L:18471992-18472153 + dme-let-7 Known_mirbase AA----------------------------A----CCACCTA---------GCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCATTTGA-TAAAAGAA----------T---CC-------------------CA-ATCGAACTG----------CA---C
droSim2 2l:18032980-18033169 + dsi-let-7 Known_mirbase ATGATATCCAGAAGATCCTTTAAAAACCAAA----CCACCTA---------GCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCATTTGA-TTAAAGAA----------C---CC-------------------CA-ATCGAACTG----------CA---C
droSec2 scaffold_7:2097933-2098101 + dse-let-7 Known_mirbase AA---------------------AAACCAAA----CCACCTA---------GCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCATTTGA-TTAAAGAA----------C---CC-------------------CA-ATCGAACTG----------CA---C
droYak3 2R:4988784-4988953 + dya-let-7 Known_mirbase AA---------------------AAACCAAA--A-CCTCCTA---------GCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCATTTGA-TTAAAGAA----------T---CC-------------------CA-ATCGAACCG----------CA---C
droEre2 scaffold_4845:5799374-5799563 - der-let-7 Known_mirbase AAGAAATCCAGAAGATCCTTTAAAAACCAAA----CCACCTA---------GCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCATTTGA-TTAAAGAA----------T---CC-------------------CA-ATCGAACTG----------CA---C

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droGri2
AA---------------------AAACAAAA--A-CCAGCAA---------GCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTATCTATC-TACCATACTATACAGCTTGCTAGCTTTCTTTGCTTGACTATAAGCAGCAT-AGA-ACGAAA-C--------C-----CT-------------------CT-CACACACTGAAAAAAAAAACA---CSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
...............................................................................................TGAGGTAGTAGGTTGTATAGT.........................................................................................................................................21216453.00329061882614080
...............................................................................................TGAGGTAGTAGGTTGTATAG..........................................................................................................................................20210239.5020479136936786
...............................................................................................TGAGGTAGTAGGTTGTATAGTA........................................................................................................................................2222998.00599633612635
...............................................................................................TGAGGTAGTAGGTTGTATAGTT........................................................................................................................................2221223.5024471681766
................................................................................................GAGGTAGTAGGTTGTATAGT.........................................................................................................................................202642.001284127311
...............................................................................................TGAGGTAGTAGGTTGTATA...........................................................................................................................................192547.501095606489
................................................................................................GAGGTAGTAGGTTGTATAG..........................................................................................................................................192446.008928884
...............................................................................................TGAGGTAGTAGGTTGTATAGTAA.......................................................................................................................................232336.00672135537
...............................................................................................TGAGGTAGTAGGTTGTATAGA.........................................................................................................................................212287.00574209365
...............................................................................................TGAGGTAGTAGGTTGTATAGTAT.......................................................................................................................................232239.00478207271
...............................................................................................TGAGGTAGTAGGTTGTAT............................................................................................................................................182210.0042037941
...............................................................................................TGAGGTAGTAGGTTGTATAGTTT.......................................................................................................................................232141.5028320182
................................................................................................GAGGTAGTAGGTTGTATAGTA........................................................................................................................................212118.002362333
...............................................................................................TGAGGTAGTAGGTTGTATT...........................................................................................................................................19281.001628973
................................................................................................GAGGTAGTAGGTTGTATAGTT........................................................................................................................................21261.001221220
...............................................................................................TGAGGTAGTAGGTTGTATAA..........................................................................................................................................20256.001122290
.................................................................................................AGGTAGTAGGTTGTATAGT.........................................................................................................................................19238.0076751
......................................................................................................................................CTATACAGCTTGCTAGCTTTCT.................................................................................................22233.0066633
...............................................................................................TGAGGTAGTAGGTTGTATAGTAAA......................................................................................................................................24228.5057651
...............................................................................................TGAGGTAGTAGGTTGTATAT..........................................................................................................................................20228.50571839
...............................................................................................TGAGGTAGTAGGTTGTATAGTG........................................................................................................................................22222.00443311
...............................................................................................TGAGGTAGTAGGTTGTATAGC.........................................................................................................................................21220.50411625
...............................................................................................TGAGGTAGTAGGTTGTATAGTC........................................................................................................................................22218.50371126
...............................................................................................TGAGGTAGTAGGTTGTATAGG.........................................................................................................................................21218.0036324
................................................................................................GAGGTAGTAGGTTGTATA...........................................................................................................................................18216.0032320
.................................................................................................AGGTAGTAGGTTGTATAG..........................................................................................................................................18215.5031310
...............................................................................................TGAGGTAGTAGGTTGTATTT..........................................................................................................................................20215.00301713
..................................................................................................GGTAGTAGGTTGTATAGT.........................................................................................................................................18214.5029290
..............................................................................................TTGAGGTAGTAGGTTGTATAGT.........................................................................................................................................22211.0022220
...............................................................................................TGAGGTAGTAGGTTGTATAGTAC.......................................................................................................................................23210.0020713
..............................................................................................TTGAGGTAGTAGGTTGTATAG..........................................................................................................................................2129.5019190
...............................................................................................TGAGGTAGTAGGTTGTATAGAT........................................................................................................................................2228.5017512
...............................................................................................TGAGGTAGTAGGTTGTATAGTTA.......................................................................................................................................2328.5017116
................................................................................................GAGGTAGTAGGTTGTATAGTAT.......................................................................................................................................2228.0016160
................................................................................................GAGGTAGTAGGTTGTATAGTTT.......................................................................................................................................2228.0016160
................................................................................................GAGGTAGTAGGTTGTATAGA.........................................................................................................................................2027.5015141
...............................................................................................TGAGGTAGTAGGTTGTATAAA.........................................................................................................................................2126.5013310
......................................................................................................................................CTATACAGCTTGCTAGCTTTC..................................................................................................2124.50990
...............................................................................................TGAGGTAGTAGGTTGTATAGTAG.......................................................................................................................................2324.00862
...............................................................................................TGAGGTAGTAGGTTGTATC...........................................................................................................................................1924.00817
................................................................................................GAGGTAGTAGGTTGTATAGTAA.......................................................................................................................................2224.00880
...............................................................................................TGAGGTAGTAGGTTGTATAC..........................................................................................................................................2024.00826
................................................................................................GAGGTAGTAGGTTGTATT...........................................................................................................................................1823.50770
...............................................................................................TGAGGTAGTAGGTTGTATAGTTAA......................................................................................................................................2423.00624
.................................................................................................AGGTAGTAGGTTGTATAGTA........................................................................................................................................2023.00660
...............................................................................................TGAGGTAGTAGGTTGTATAGTTC.......................................................................................................................................2322.50532
.................................................................................................AGGTAGTAGGTTGTATAGTT........................................................................................................................................2022.50550
...............................................................................................TGAGGTAGTAGGTTGTATAGGC........................................................................................................................................2222.50550
..............................................................................................TTGAGGTAGTAGGTTGTATAGTA........................................................................................................................................2322.00440
...............................................................................................TGAGGTAGTAGGTTGTATAGTACA......................................................................................................................................2422.00413
.......................................................................................................................................TATACAGCTTGCTAGCTTTCT.................................................................................................2122.00440
...............................................................................................TGAGGTAGTAGGTTGTAGT...........................................................................................................................................1922.00404
.............................................................................................ATTGAGGTAGTAGGTTGTATAGT.........................................................................................................................................2322.00440
................................................................................................GAGGTAGTAGGTTGTATAGTG........................................................................................................................................2121.50330
...............................................................................................TGAGGTAGTAGGTTGTATAGTGA.......................................................................................................................................2321.50312
...............................................................................................TGAGGTAGTAGGTTGTATAGTCA.......................................................................................................................................2321.50312
...............................................................................................TGAGGTAGTAGGTTGTATAGGG........................................................................................................................................2221.50330
................................................................................................GAGGTAGTAGGTTGTATAT..........................................................................................................................................1921.50330
...............................................................................................TGAGGTAGTAGGTTGTATTA..........................................................................................................................................2021.50312
...............................................................................................TGAGGTAGTAGGTTGTATAGGCA.......................................................................................................................................2321.50330
...............................................................................................TGAGGTAGTAGGTTGTATAGTCT.......................................................................................................................................2321.50330
......................................................................................................................................CTATACAGCTTGCTAGCT.....................................................................................................1821.00220
...............................................................................................TGAGGTAGTAGGTTGTATCC..........................................................................................................................................2021.00202
...............................................................................................TGAGGTAGTAGGTTGTATG...........................................................................................................................................1921.00202
..................................................................................................GGTAGTAGGTTGTATAGTA........................................................................................................................................1921.00220
...............................................................................................TGAGGTAGTAGGTTGTATATG.........................................................................................................................................2121.00220
...............................................................................................TGAGGTAGTAGGTTGTATAGGGA.......................................................................................................................................2321.00220
................................................................................................GAGGTAGTAGGTTGTATAGTAG.......................................................................................................................................2221.00220
droVir3
AA---------------------CAGC---------AGGCAAGCTAAAAGGACAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTATTTATA-GAGCATACTATACAGCGTGCTAGCTTTCTTTGCTTGACAATAAGCCGCAAAGAAAACCAAC-CCCCCCATCCCT---CTCTACACACACACACACACACA-CAC--AC-----------------ASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
...............................................................................................TGAGGTAGTAGGTTGTATAGT.........................................................................................................................................211386682.00386682148965574240972168485018537152364317007180942619292216541168263611344804823408116714358422440677476551019331258129130279792243932317241872750540000000000000101153331737902684441341376245576652277128747547751946881611716381390288395
...............................................................................................TGAGGTAGTAGGTTGTATAGTA........................................................................................................................................221175154.001751545192259133234118018665354952272372871258245154192272216216843581947327326216602745269647354314944412434466815352720441129335622530000000000000003171175883187143610551323361686492903011637852216929191885489
...............................................................................................TGAGGTAGTAGGTTGTATAG..........................................................................................................................................201134169.0013416932716901648625572049395122532237442540523793221113663364177869122837544792129477570114239559706116114744128718176313511215221600000000000000000062021695816515215348233311357476943137753441210153159135161
...............................................................................................TGAGGTAGTAGGTTGTATAGTC........................................................................................................................................22174129.0074129153515872842332818622031678845411603113215234901004126976366245818022434226663977843286395630272420007429350000000000000001011903509596407172530155524231644187426602285122241311
...............................................................................................TGAGGTAGTAGGTTGTATAGTAA.......................................................................................................................................23125479.0025479269990801153454750532111341674136555260192529187179452130111514736337476056615281792712239130476127111697462000000000000000006079605108617913841327310476145299231259558884240
...............................................................................................TGAGGTAGTAGGTTGTATA...........................................................................................................................................1918140.008140657357190511521942355432550001236753132542794221901113839643332041321844009000007106000000000000000001100969106801221010100216601188911208224
...............................................................................................TGAGGTAGTAGGTTGTATAGTAT.......................................................................................................................................2317523.00752353446001811576436288191001326648168604216831443216162148845928372638863212120225186000000000000000005004061222058666512835201211231711610
...............................................................................................TGAGGTAGTAGGTTGTATAGTT........................................................................................................................................2217321.0073213417111091196064916170800015786721818545874038634645271643445481896112102110018720000000000000000012506901145047780007010047564150171034
...............................................................................................TGAGGTAGTAGGTTGTATAGTCC.......................................................................................................................................2314731.00473182181160181384012011000660043233225274111210313474218617030700005303000000000000000004300193390630001582201969827720303322
...............................................................................................TGAGGTAGTAGGTTGTAT............................................................................................................................................1814719.00471949287707113441346261151300045292474241250102465230236437224422158379053100010320000000000000000060010857910501023622629443202236
......................................................................................................................................CTATACAGCGTGCTAGCTTTCT.................................................................................................2213811.003811131780172132170213630001997545105131522751701172178679110761518652150014220003052240000000000000000000183920285500054733100000
................................................................................................GAGGTAGTAGGTTGTATAGT.........................................................................................................................................2013321.0033210231206120121100000000000607432132910160400000200000000000000000000354600000011013100100
...............................................................................................TGAGGTAGTAGGTTGTATAGA.........................................................................................................................................2113169.003169171163641647720720262150002522162381483771516111629611443100020000052300000000000000000311389856012114431442915181623956
...............................................................................................TGAGGTAGTAGGTTGTATAGTAAA......................................................................................................................................2412534.0025344319607181532279151263331393191717779527216338889748159212113191582400000000000000000006604620567647110669915484453766664344
...............................................................................................TGAGGTAGTAGGTTGTATAGTCT.......................................................................................................................................2312178.002178722870563213182200033140110201479111272222991043740133000001070000000000000000070015142041310129402426473603300
...............................................................................................TGAGGTAGTAGGTTGTATAA..........................................................................................................................................2011346.0013461187203273387454010392694621918857126461256613573011001021800000000000000000000214353001100411015500101
...............................................................................................TGAGGTAGTAGGTTGTATAGTAC.......................................................................................................................................2311158.00115823322002294391655800085182127317476792750235902000002200000000000000000010116580000009213850627612800101
................................................................................................GAGGTAGTAGGTTGTATAG..........................................................................................................................................1911128.001128001064002000000001000111012101138390100000200000000000000000000111001200000100001000
................................................................................................GAGGTAGTAGGTTGTATAGTA........................................................................................................................................2111008.0010080091800102242000010010002101245321501000005000000000000000000004904000047035000000
...............................................................................................TGAGGTAGTAGGTTGTATAGC.........................................................................................................................................211922.00922352521311107181255000696551376239455420211541071000110000000000000000000002158101500024013100000
...............................................................................................TGAGGTAGTAGGTTGTATAGTTC.......................................................................................................................................231857.008575111505183009100004103423404110117112242165090000025600000000000000000000661020000460147400010
...............................................................................................TGAGGTAGTAGGTTGTATAGTTT.......................................................................................................................................231817.0081758120024010111000252012341410947439011632582348010000018000000000000000002007814405600073023202000
...............................................................................................TGAGGTAGTAGGTTGTATAGG.........................................................................................................................................211774.007741174741100001711140000100008023000041020000000300000000000000000000583003200074512300000
...............................................................................................TGAGGTAGTAGGTTGTATT...........................................................................................................................................191683.006839129131013051130000561860425421111123923010000040000000000000000030013010800100059556200000
...............................................................................................TGAGGTAGTAGGTTGTATC...........................................................................................................................................191588.00588445145011320029400054322062134312220601527014000001900000000000000000500209400201061452420400000
...............................................................................................TGAGGTAGTAGGTTGTATAGTCA.......................................................................................................................................231509.00509003704600031000402300330134481345172189202100103250000000000000000000094704312023643001101
...............................................................................................TGAGGTAGTAGGTTGTATCC..........................................................................................................................................201380.003805328028101391000420140102362231173982801400000140000000000000000030086300000081071191300000
...............................................................................................TGAGGTAGTAGGTTGTATAT..........................................................................................................................................201373.003731334015222220000585126464176010092082001400001500000000000000000000766600000001114100000
.................................................................................................AGGTAGTAGGTTGTATAGT.........................................................................................................................................191368.0036803307011032500000000003022101251203000000000000000000000000010031000000001000000000
..................................................................................................GGTAGTAGGTTGTATAGT.........................................................................................................................................181347.0034702203058223536300000000030131021233507000013000000000000000000009103300061100100000
...............................................................................................TGAGGTAGTAGGTTGTATAGTAG.......................................................................................................................................231256.002560229012042800102102123081344619268261301101600000000000000000000213201210053053200120
...............................................................................................TGAGGTAGTAGGTTGTATAGTG........................................................................................................................................221238.00238352802571321210003224007054102083180100000400000000000000000000473402100013142801100
......................................................................................................................................CTATACAGCGTGCTAGCTTTC..................................................................................................211236.002360017043110100000116289122881453118471309000014190000000000000000000091500300000000000000
................................................................................................GAGGTAGTAGGTTGTATAGTC........................................................................................................................................211230.00230001910010002100000000060010000581502000001000000000000000000001200000000011100000
...............................................................................................TGAGGTAGTAGGTTGTATAAA.........................................................................................................................................211155.001551630000621140003223112061014256151100000000000000000000000100204200320010000310110
...............................................................................................TGAGGTAGTAGGTTGTA.............................................................................................................................................171131.00131000000000000000000000000000000000000000000000000000000000180099001510000000002032
...............................................................................................TGAGGTAGTAGGTTGTATAC..........................................................................................................................................201127.00127111400110002000210100504100001512010000000000000000000000010061500000015015300001
...............................................................................................TGAGGTAGTAGGTTGTATAGTAAC......................................................................................................................................241127.00127631000011000003001001020001112241100000000000000000000000001060001001026610112003010
...............................................................................................TGAGGTAGTAGGTTGTATAGTTA.......................................................................................................................................231102.00102057000000300002123103010000003915070000020000000000000000000082500000010210100000
...............................................................................................TGAGGTAGTAGGTTGTATAGCC........................................................................................................................................22193.0093302002010111000000001190110000264807000008000000000000000001006800000000000100000
.................................................................................................AGGTAGTAGGTTGTATAG..........................................................................................................................................18191.009102680010101000000001010020010360000000000000000000000000000002200000000000000000
................................................................................................GAGGTAGTAGGTTGTATAGTT........................................................................................................................................21184.008400790000000000010000000000000000100000000000000000000000000002100000000000000000
..................................................................................................GGTAGTAGGTTGTATAGTA........................................................................................................................................19181.008111800707915300000000030011120021102000006000000000000000000000000000014020300000
.................................................................................................AGGTAGTAGGTTGTATAGTA........................................................................................................................................20180.008011510111003100000000000120000251303000000000000000000000000002100000000000000000
................................................................................................GAGGTAGTAGGTTGTATAGTAA.......................................................................................................................................22179.007900680000001000000010010001000120001000000000000000000000000000300000000000000000
..................................................................................................GGTAGTAGGTTGTATAGTC........................................................................................................................................19176.007600001700045000000000040000000131004000004000000000000000000001100000002011000000
...............................................................................................TGAGGTAGTAGGTTGTATAGTATC......................................................................................................................................24176.00763430030000000000010020100000574700000004000000000000000000000500000042148800000
................................................................................................GAGGTAGTAGGTTGTATA...........................................................................................................................................18172.007210620000000000000000010200000020000000000000000000000000000004000000000000000000
...............................................................................................TGAGGTAGTAGGTTGTATTT..........................................................................................................................................20261.001221327002010000004223100170000012050100000000000000000000000100243100000020000000001
..............................................................................................TTGAGGTAGTAGGTTGTATAGT.........................................................................................................................................22159.005900530000000000000000000000000021100000000000000000000000000001000000000000001000
....................................................................................................TAGTAGGTTGTATAGTAA.......................................................................................................................................18157.0057000001312615300000011040000000000205000004000000000000000000000000000000000000000
...................................................................................................GTAGTAGGTTGTATAGTA........................................................................................................................................18156.00560070161901000000020040010010162202000001000000000000000000001000000023002100000
...............................................................................................TGAGGTAGTAGGTTGTATAGTATA......................................................................................................................................24149.00490420000001000010301020200000611301020000000000000000000000004300002041010000022
...............................................................................................TGAGGTAGTAGGTTGTATCT..........................................................................................................................................20149.004901900001070000100000001100003131010000000000000000000000000011200000010101300000
......................................................................................................................................CTATACAGCGTGCTAGCTTT...................................................................................................20145.00450080201000000030321011020100410600000022000000000000000000003100100000000000000
...............................................................................................TGAGGTAGTAGGTTGTATTC..........................................................................................................................................20143.004310200000140000000010011000002311000000030000000000000000000031100000020212100000
...............................................................................................TGAGGTAGTAGGTTGTATAGAC........................................................................................................................................22142.00424820011000000000000060000020221000000001000000000000000000003500000001002100000
...............................................................................................TGAGGTAGTAGGTTGTATAGTTAA......................................................................................................................................24141.00410270000000000031210000200000711200000001000000000000000000003501000000000002000
...................................................................................................GTAGTAGGTTGTATAGTC........................................................................................................................................18141.004120100100014000000000040100000250305000002000000000000000000000000000000010000000
.......................................................................................................................................TATACAGCGTGCTAGCTTTCT.................................................................................................21141.004100130001000000030022020100110110003000023000000000000000000001000400000000000000
................................................................................................GAGGTAGTAGGTTGTATAGTAT.......................................................................................................................................22137.003700330000000000000000000000000000000000000000000000000000000001300000000000000000
...............................................................................................TGAGGTAGTAGGTTGTATTA..........................................................................................................................................20136.003613601201011000000110000000001100000000000000000000000000000051000000001000000000
...............................................................................................TGAGGTAGTAGGTTGTATAGTCAA......................................................................................................................................24135.00350010000001000000110000000210330200000012000000000000000000000300000152201110100
......................................................................................................................................CTATACAGCGTGCTAGCTTTCTC................................................................................................23133.00330010130000000000020050120000432200000006000000000000000000000001000000000000000
droMoj3
AC---------------------TGACATAA--ACCAAGCAA---------GCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTACTTATA-GACCATACTATACAGCGTGCTAGCTTTCTTTGCTTGACTATAAGCCGCAA---------AGAC-----A----T---CC-------------------CA-CAC--AC-----------------ASizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
...............................................................................................TGAGGTAGTAGGTTGTATAGT.........................................................................................................................................211315102.0031510212742432268543234347128402
...............................................................................................TGAGGTAGTAGGTTGTATAG..........................................................................................................................................20190378.009037843801111099412201523366
...............................................................................................TGAGGTAGTAGGTTGTATAGTA........................................................................................................................................22186171.008617135430103592375008937126
...............................................................................................TGAGGTAGTAGGTTGTATAGTC........................................................................................................................................22140845.0040845111911146219211026260
...............................................................................................TGAGGTAGTAGGTTGTATAGTAA.......................................................................................................................................23113754.001375423176865126629298
................................................................................................GAGGTAGTAGGTTGTATAGT.........................................................................................................................................2018445.00844582130161969128
...............................................................................................TGAGGTAGTAGGTTGTATAGTT........................................................................................................................................2217954.0079543691162683002806
...............................................................................................TGAGGTAGTAGGTTGTATA...........................................................................................................................................1914426.0044261396047859811953
...............................................................................................TGAGGTAGTAGGTTGTATAGTAT.......................................................................................................................................2314017.004017947030245712310
...............................................................................................TGAGGTAGTAGGTTGTAT............................................................................................................................................1813283.003283122607509300377
................................................................................................GAGGTAGTAGGTTGTATAG..........................................................................................................................................1912570.0025702531096123
...............................................................................................TGAGGTAGTAGGTTGTATAGA.........................................................................................................................................2112447.002447728022830601185
................................................................................................GAGGTAGTAGGTTGTATAGTA........................................................................................................................................2112311.0023112264046037
...............................................................................................TGAGGTAGTAGGTTGTATAGTCT.......................................................................................................................................2311519.001519457038770947
...............................................................................................TGAGGTAGTAGGTTGTATAGC.........................................................................................................................................2111512.0015123970951539858
...............................................................................................TGAGGTAGTAGGTTGTATAGTCA.......................................................................................................................................2311311.001311371080870773
...............................................................................................TGAGGTAGTAGGTTGTATC...........................................................................................................................................1911112.001112188060630801
...............................................................................................TGAGGTAGTAGGTTGTATAGTAAA......................................................................................................................................241983.009831252601060690
...............................................................................................TGAGGTAGTAGGTTGTATAGTCC.......................................................................................................................................231947.00947287050430567
...............................................................................................TGAGGTAGTAGGTTGTATT...........................................................................................................................................191946.0094627901331690365
...............................................................................................TGAGGTAGTAGGTTGTATAGTTC.......................................................................................................................................231779.00779135121300592
...............................................................................................TGAGGTAGTAGGTTGTATAA..........................................................................................................................................201753.0075313701021040410
...............................................................................................TGAGGTAGTAGGTTGTATAGTTT.......................................................................................................................................231705.00705242059840320
................................................................................................GAGGTAGTAGGTTGTATAGTC........................................................................................................................................211673.00673635022034
......................................................................................................................................CTATACAGCGTGCTAGCTTTCT.................................................................................................221640.00640260610713325109
...............................................................................................TGAGGTAGTAGGTTGTATAT..........................................................................................................................................201626.006261150246950170
.................................................................................................AGGTAGTAGGTTGTATAGT.........................................................................................................................................191562.005625120422618
...............................................................................................TGAGGTAGTAGGTTGTATAGTCTC......................................................................................................................................241443.0044381014260322
...............................................................................................TGAGGTAGTAGGTTGTATAGTAC.......................................................................................................................................231314.0031476022250191
...............................................................................................TGAGGTAGTAGGTTGTATAGTG........................................................................................................................................221263.002638715445076
..................................................................................................GGTAGTAGGTTGTATAGT.........................................................................................................................................181257.002572030752715
................................................................................................GAGGTAGTAGGTTGTATAGTT........................................................................................................................................211224.0022422100003
...............................................................................................TGAGGTAGTAGGTTGTATAGTATC......................................................................................................................................241206.00206290450168
...............................................................................................TGAGGTAGTAGGTTGTATCC..........................................................................................................................................201191.0019137012160126
................................................................................................GAGGTAGTAGGTTGTATAGTAA.......................................................................................................................................221172.00172159002011
...............................................................................................TGAGGTAGTAGGTTGTATAGG.........................................................................................................................................211141.001414704042012
...............................................................................................TGAGGTAGTAGGTTGTATCT..........................................................................................................................................201134.0013423088095
...............................................................................................TGAGGTAGTAGGTTGTATAGCC........................................................................................................................................221131.00131520720052
..............................................................................................TTGAGGTAGTAGGTTGTATAGT.........................................................................................................................................221115.0011511500000
.................................................................................................AGGTAGTAGGTTGTATAG..........................................................................................................................................181110.0011010700300
.................................................................................................AGGTAGTAGGTTGTATAGTA........................................................................................................................................201102.001029500115
...............................................................................................TGAGGTAGTAGGTTGTATAGTAG.......................................................................................................................................23195.00953701512031
...............................................................................................TGAGGTAGTAGGTTGTATTC..........................................................................................................................................20194.009411029072
...............................................................................................TGAGGTAGTAGGTTGTATAGTTA.......................................................................................................................................23193.00932501510043
...............................................................................................TGAGGTAGTAGGTTGTATTT..........................................................................................................................................20385.0025562029440120
................................................................................................GAGGTAGTAGGTTGTATA...........................................................................................................................................18182.00827901011
......................................................................................................................................CTATACAGCGTGCTAGCTTTC..................................................................................................21181.00812601714420
...............................................................................................TGAGGTAGTAGGTTGTATAAA.........................................................................................................................................21173.007313059145
...............................................................................................TGAGGTAGTAGGTTGTATAGTCAA......................................................................................................................................24161.00618063044
................................................................................................GAGGTAGTAGGTTGTATAGTAT.......................................................................................................................................22158.00585500102
...............................................................................................TGAGGTAGTAGGTTGTATAC..........................................................................................................................................20155.005580912026
................................................................................................GAGGTAGTAGGTTGTATAGA.........................................................................................................................................20152.00524901101
...............................................................................................TGAGGTAGTAGGTTGTATCA..........................................................................................................................................20147.00479052031
..............................................................................................TTGAGGTAGTAGGTTGTATAG..........................................................................................................................................21144.00444400000
...............................................................................................TGAGGTAGTAGGTTGTAA............................................................................................................................................18143.0043100121605
...............................................................................................TGAGGTAGTAGGTTGTATATC.........................................................................................................................................21141.004110047020
...............................................................................................TGAGGTAGTAGGTTGTATTA..........................................................................................................................................20141.004112034022
...............................................................................................TGAGGTAGTAGGTTGTATAGTTTC......................................................................................................................................24140.00409010030
................................................................................................GAGGTAGTAGGTTGTATAGC.........................................................................................................................................20140.004028000111
................................................................................................GAGGTAGTAGGTTGTATAGTCT.......................................................................................................................................22131.00313100000
...............................................................................................TGAGGTAGTAGGTTGTATAGTCCC......................................................................................................................................24131.00316032020
...............................................................................................TGAGGTAGTAGGTTGTA.............................................................................................................................................17130.00300003000
.................................................................................................AGGTAGTAGGTTGTATAGTC........................................................................................................................................20130.00302800101
...............................................................................................TGAGGTAGTAGGTTGTATAGTTAA......................................................................................................................................24127.00272034018
..............................................................................................TTGAGGTAGTAGGTTGTATAGTA........................................................................................................................................23127.00272700000
..................................................................................................GGTAGTAGGTTGTATAGTA........................................................................................................................................19127.00272100204
...............................................................................................TGAGGTAGTAGGTTGTATAGTGA.......................................................................................................................................23126.00262064014
......................................................................................................................................CTATACAGCGTGCTAGCTTTCTC................................................................................................23126.00267111115
...............................................................................................TGAGGTAGTAGGTTGTATAGCT........................................................................................................................................22124.00243024015
...............................................................................................TGAGGTAGTAGGTTGTATAGTATCC.....................................................................................................................................25124.00248012013
......................................................................................................................................CTATACAGCGTGCTAGCTTT...................................................................................................20123.0023901616
.......................................................................................................................................TATACAGCGTGCTAGCTTTCT.................................................................................................21122.00222001001
droWil2
TA---------------------AAACCTCA--A-TTAA-AT---------GCAAAAAGGACTA-CTTAAAAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTATTCAATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTATAAGCCACA-----------------------------------------------------------------------------SizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
...............................................................................................TGAGGTAGTAGGTTGTATAGT.........................................................................................................................................211597905.005979055285157359284851476457734
...............................................................................................TGAGGTAGTAGGTTGTATAG..........................................................................................................................................201129865.001298651103730726892361078569
...............................................................................................TGAGGTAGTAGGTTGTATAGTA........................................................................................................................................221114016.001140161223114924576639780698
...............................................................................................TGAGGTAGTAGGTTGTATAGTAA.......................................................................................................................................23123305.002330527711751042100219809
...............................................................................................TGAGGTAGTAGGTTGTATA...........................................................................................................................................19113863.001386336371188666238349
...............................................................................................TGAGGTAGTAGGTTGTATAGA.........................................................................................................................................2117285.007285491638494475615
...............................................................................................TGAGGTAGTAGGTTGTAT............................................................................................................................................1816436.0064361581152778153235
...............................................................................................TGAGGTAGTAGGTTGTATAGTT........................................................................................................................................2214806.0048066571292369142474
................................................................................................GAGGTAGTAGGTTGTATAGT.........................................................................................................................................2013809.003809203336182433
...............................................................................................TGAGGTAGTAGGTTGTATT...........................................................................................................................................1913256.00325685763422521538
...............................................................................................TGAGGTAGTAGGTTGTATAGTAAA......................................................................................................................................2412717.00271785153726731734
...............................................................................................TGAGGTAGTAGGTTGTATAGTAT.......................................................................................................................................2312683.0026837329716982136
...............................................................................................TGAGGTAGTAGGTTGTATAGG.........................................................................................................................................2112297.0022972170294094
...............................................................................................TGAGGTAGTAGGTTGTATAGC.........................................................................................................................................2112293.002293131435530891
................................................................................................GAGGTAGTAGGTTGTATAG..........................................................................................................................................1911930.001930218348185
...............................................................................................TGAGGTAGTAGGTTGTATAA..........................................................................................................................................2011905.00190530112132211610
................................................................................................GAGGTAGTAGGTTGTATAGTA........................................................................................................................................211999.0099949353057
......................................................................................................................................CTATACAATGTGCTAGCTTTCT.................................................................................................221968.0096853186310716
...............................................................................................TGAGGTAGTAGGTTGTATC...........................................................................................................................................191761.0076124742150457
...............................................................................................TGAGGTAGTAGGTTGTATAGTAC.......................................................................................................................................231726.0072619830167475
...............................................................................................TGAGGTAGTAGGTTGTATTT..........................................................................................................................................201724.0072421135590509
...............................................................................................TGAGGTAGTAGGTTGTATAGTC........................................................................................................................................221646.0064611961221443
...............................................................................................TGAGGTAGTAGGTTGTATAT..........................................................................................................................................201456.004561661354340
...............................................................................................TGAGGTAGTAGGTTGTATCC..........................................................................................................................................201351.00351152770302
...............................................................................................TGAGGTAGTAGGTTGTATAGTTT.......................................................................................................................................231322.0032233119221147
.................................................................................................AGGTAGTAGGTTGTATAGT.........................................................................................................................................191256.00256381606052
...............................................................................................TGAGGTAGTAGGTTGTATAGTG........................................................................................................................................221226.00226212682169
...............................................................................................TGAGGTAGTAGGTTGTATAGTTC.......................................................................................................................................231210.00210231690162
...............................................................................................TGAGGTAGTAGGTTGTATAAA.........................................................................................................................................211203.002031315713155
...............................................................................................TGAGGTAGTAGGTTGTATAGTCC.......................................................................................................................................231185.0018583110145
...............................................................................................TGAGGTAGTAGGTTGTATAGTAG.......................................................................................................................................231157.0015721321139
..................................................................................................GGTAGTAGGTTGTATAGT.........................................................................................................................................181144.0014426692047
...............................................................................................TGAGGTAGTAGGTTGTATAC..........................................................................................................................................201119.001193264077
.................................................................................................AGGTAGTAGGTTGTATAG..........................................................................................................................................181105.001054900011
...............................................................................................TGAGGTAGTAGGTTGTATCCC.........................................................................................................................................21197.0097362086
...............................................................................................TGAGGTAGTAGGTTGTATCT..........................................................................................................................................20191.009114101066
...............................................................................................TGAGGTAGTAGGTTGTATAGTCCC......................................................................................................................................24191.00913131074
................................................................................................GAGGTAGTAGGTTGTATAGTAA.......................................................................................................................................22181.00810570024
................................................................................................GAGGTAGTAGGTTGTATA...........................................................................................................................................18180.0080172007
......................................................................................................................................CTATACAATGTGCTAGCTTTC..................................................................................................21175.00756161052
................................................................................................GAGGTAGTAGGTTGTATAGTT........................................................................................................................................21161.0061156202
.................................................................................................AGGTAGTAGGTTGTATAGTA........................................................................................................................................20159.0059153005
...............................................................................................TGAGGTAGTAGGTTGTATG...........................................................................................................................................19158.005814113030
...............................................................................................TGAGGTAGTAGGTTGTAGT...........................................................................................................................................19457.7523117170206
...............................................................................................TGAGGTAGTAGGTTGTATAGTTCC......................................................................................................................................24155.00551341037
..............................................................................................TTGAGGTAGTAGGTTGTATAGT.........................................................................................................................................22152.0052046006
...............................................................................................TGAGGTAGTAGGTTGTAC............................................................................................................................................18150.0050461003
...............................................................................................TGAGGTAGTAGGTTGTATTA..........................................................................................................................................20249.509912116070
................................................................................................GAGGTAGTAGGTTGTATAGA.........................................................................................................................................20148.0048042006
...............................................................................................TGAGGTAGTAGGTTGTATAGTATC......................................................................................................................................24146.00461750024
................................................................................................GAGGTAGTAGGTTGTATT...........................................................................................................................................18144.0044043001
...............................................................................................TGAGGTAGTAGGTTGTATAGTAAC......................................................................................................................................24140.0040610429
...............................................................................................TGAGGTAGTAGGTTGTATAGTTA.......................................................................................................................................23138.0038284024
..............................................................................................TTGAGGTAGTAGGTTGTATAG..........................................................................................................................................21134.0034034000
...............................................................................................TGAGGTAGTAGGTTGTAA............................................................................................................................................18232.506514203127
..................................................................................................GGTAGTAGGTTGTATAGTA........................................................................................................................................19130.0030416109
...............................................................................................TGAGGTAGTAGGTTGTATAGAT........................................................................................................................................22129.0029004025
...............................................................................................TGAGGTAGTAGGTTGTATATA.........................................................................................................................................21129.0029041024
...............................................................................................TGAGGTAGTAGGTTGTATTC..........................................................................................................................................20127.0027020025
...................................................................................................GTAGTAGGTTGTATAGTA........................................................................................................................................18124.0024213009
...............................................................................................TGAGGTAGTAGGTTGTATAGTAAG......................................................................................................................................24121.0021200217
...............................................................................................TGAGGTAGTAGGTTGTATAGTCA.......................................................................................................................................23120.0020021116
dp5
CA---------------------AACCATAA------GCCCA---------ACAAAAAGGACCAGCACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTACTT-CA-GATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACTATAAGCCTCATTTGA-ACAGCC-C--------A-GCCCCC-------------------CGCCCCAAACAG---------------CSizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
...............................................................................................TGAGGTAGTAGGTTGTATAGT.........................................................................................................................................211170482.0017048220072531248335353431243151342067481726
...............................................................................................TGAGGTAGTAGGTTGTATAG..........................................................................................................................................201125585.0012558559586241171842065318622459420656654
...............................................................................................TGAGGTAGTAGGTTGTATAGTA........................................................................................................................................22152007.005200744190693131519591810177350960455908
...............................................................................................TGAGGTAGTAGGTTGTATAGTT........................................................................................................................................2219557.0095571044331586013541614290119970
................................................................................................GAGGTAGTAGGTTGTATAGT.........................................................................................................................................2015607.005607153121257088126461
...............................................................................................TGAGGTAGTAGGTTGTATA...........................................................................................................................................1915413.00541316251101090851126910552725
...............................................................................................TGAGGTAGTAGGTTGTATAGTAA.......................................................................................................................................2314006.004006188802114411939220375120
................................................................................................GAGGTAGTAGGTTGTATAG..........................................................................................................................................1913892.0038920380802023304232
...............................................................................................TGAGGTAGTAGGTTGTAT............................................................................................................................................1813136.00313682156059069520431496
...............................................................................................TGAGGTAGTAGGTTGTATAGA.........................................................................................................................................2112190.002190170404002745131325197
...............................................................................................TGAGGTAGTAGGTTGTATT...........................................................................................................................................1911919.001919413330590242272090
................................................................................................GAGGTAGTAGGTTGTATAGTA........................................................................................................................................2111593.001593114400904386185
...............................................................................................TGAGGTAGTAGGTTGTATAGC.........................................................................................................................................2111474.00147424211243010778010
...............................................................................................TGAGGTAGTAGGTTGTATAGTAT.......................................................................................................................................2311088.00108802810160112417571969
...............................................................................................TGAGGTAGTAGGTTGTATAGTTT.......................................................................................................................................231995.0099514210510104193351891
...............................................................................................TGAGGTAGTAGGTTGTATAA..........................................................................................................................................201625.0062501950701112816241
...............................................................................................TGAGGTAGTAGGTTGTATTT..........................................................................................................................................201590.005900373020065126060
.................................................................................................AGGTAGTAGGTTGTATAGT.........................................................................................................................................191576.00576055657042020
......................................................................................................................................CTATACAATGTGCTAGCTTTCT.................................................................................................221394.00394032922601916011
...............................................................................................TGAGGTAGTAGGTTGTATAT..........................................................................................................................................201350.003500960130126972160
..................................................................................................GGTAGTAGGTTGTATAGT.........................................................................................................................................181333.00333030634006491
...............................................................................................TGAGGTAGTAGGTTGTATAGTAAA......................................................................................................................................241290.00290060030281724221
................................................................................................GAGGTAGTAGGTTGTATAGTT........................................................................................................................................211282.00282027303006000
...............................................................................................TGAGGTAGTAGGTTGTATAGTC........................................................................................................................................221260.0026018605616646121
........................................................................................................................................ATACAATGTGCTAGCTTTCT.................................................................................................201199.00199019900000000
.................................................................................................AGGTAGTAGGTTGTATAG..........................................................................................................................................181183.00183017900040000
................................................................................................GAGGTAGTAGGTTGTATA...........................................................................................................................................181145.00145014310010000
..........................................................................................................................................ACAATGTGCTAGCTTTCT.................................................................................................181141.00141014100000000
...............................................................................................TGAGGTAGTAGGTTGTATAGG.........................................................................................................................................211124.001243480200428030
................................................................................................GAGGTAGTAGGTTGTATAGTAA.......................................................................................................................................221108.00108076010625000
...............................................................................................TGAGGTAGTAGGTTGTATAGTG........................................................................................................................................221102.001020430103918001
.................................................................................................AGGTAGTAGGTTGTATAGTA........................................................................................................................................20195.009509001031000
...............................................................................................TGAGGTAGTAGGTTGTATAGTAG.......................................................................................................................................23186.00860150208911365
......................................................................................................................................CTATACAATGTGCTAGCTTTC..................................................................................................21185.008506408076000
.........................................................................................................................................TACAATGTGCTAGCTTTCT.................................................................................................19185.008508221000000
..............................................................................................TTGAGGTAGTAGGTTGTATAGT.........................................................................................................................................22184.008408300000010
................................................................................................GAGGTAGTAGGTTGTATT...........................................................................................................................................18183.008308201000000
...............................................................................................TGAGGTAGTAGGTTGTATAGTTA.......................................................................................................................................23168.006802200010203130
...............................................................................................TGAGGTAGTAGGTTGTATAGTAC.......................................................................................................................................23157.0057123030423030
..............................................................................................TTGAGGTAGTAGGTTGTATAG..........................................................................................................................................21154.005405300000100
................................................................................................GAGGTAGTAGGTTGTATAGA.........................................................................................................................................20152.005205000002000
...............................................................................................TGAGGTAGTAGGTTGTATC...........................................................................................................................................19148.0048023011086000
...............................................................................................TGAGGTAGTAGGTTGTATAAA.........................................................................................................................................21142.0042013000918020
...............................................................................................TGAGGTAGTAGGTTGTATAC..........................................................................................................................................20141.0041050170810010
.......................................................................................................................................TATACAATGTGCTAGCTTTCT.................................................................................................21135.003503500000000
..................................................................................................GGTAGTAGGTTGTATAGTA........................................................................................................................................19127.002701901001042
...............................................................................................TGAGGTAGTAGGTTGTATAGAT........................................................................................................................................22126.002602010212531
...............................................................................................TGAGGTAGTAGGTTGTAA............................................................................................................................................18126.002601701061100
...............................................................................................TGAGGTAGTAGGTTGTATAGTTAA......................................................................................................................................24126.002605000214212
...............................................................................................TGAGGTAGTAGGTTGTATAGTTC.......................................................................................................................................23126.00260506038310
................................................................................................GAGGTAGTAGGTTGTATAGTTT.......................................................................................................................................22125.002502400000010
...............................................................................................TGAGGTAGTAGGTTGTATTA..........................................................................................................................................20224.5049026010616000
................................................................................................GAGGTAGTAGGTTGTATAGTAT.......................................................................................................................................22124.002401800033000
...............................................................................................TGAGGTAGTAGGTTGTATCC..........................................................................................................................................20123.00230501098000
...............................................................................................TGAGGTAGTAGGTTGTATAGTCC.......................................................................................................................................23123.002302080103000
......................................................................................................................................CTATACAATGTGCTAGCTTT...................................................................................................20121.002102100000000
.................................................................................................AGGTAGTAGGTTGTATAGTT........................................................................................................................................20119.001901900000000
..............................................................................................TTGAGGTAGTAGGTTGTATAGTA........................................................................................................................................23117.001701700000000
...............................................................................................TGAGGTAGTAGGTTGTAC............................................................................................................................................18114.001403011000000
......................................................................................................................................CTATACAATGTGCTAGCTTTCC.................................................................................................22113.00130517000000
................................................................................................GAGGTAGTAGGTTGTATAA..........................................................................................................................................19113.001301200010000
...............................................................................................TGAGGTAGTAGGTTGTATCT..........................................................................................................................................20112.00120500025000
...............................................................................................TGAGGTAGTAGGTTGTATG...........................................................................................................................................19112.00120701030100
...............................................................................................TGAGGTAGTAGGTTGTATAGTGT.......................................................................................................................................23111.00110100054100
................................................................................................GAGGTAGTAGGTTGTATAGC.........................................................................................................................................20110.00100163000000
...............................................................................................TGAGGTAGTAGGTTGTATAGTAGTA.....................................................................................................................................25110.00100200023012
...................................................................................................GTAGTAGGTTGTATAGTA........................................................................................................................................18110.001001000000000
droPer2
CA---------------------AACCATAA------GCCCA---------ACAAAAAGGACCAGCACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTACTT-CA-GATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACTATAAGCCTCATTTGA-ACAGCC-C--------A-GCCCCC-------------------CGCCCCGAACAG----------CT---CSizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
...............................................................................................TGAGGTAGTAGGTTGTATAGT.........................................................................................................................................21281173.0016234647217212427383082967009
...............................................................................................TGAGGTAGTAGGTTGTATAG..........................................................................................................................................20241876.00837528125571257881947025928
...............................................................................................TGAGGTAGTAGGTTGTATAGTA........................................................................................................................................22217891.003578219556027297569217212
...............................................................................................TGAGGTAGTAGGTTGTATAGTT........................................................................................................................................2223102.506205012550131311882449
...............................................................................................TGAGGTAGTAGGTTGTATAGTAA.......................................................................................................................................2322285.504571032205857412923
................................................................................................GAGGTAGTAGGTTGTATAGT.........................................................................................................................................2021770.5035410144302833411474
...............................................................................................TGAGGTAGTAGGTTGTATA...........................................................................................................................................1921668.003336448001033936883
...............................................................................................TGAGGTAGTAGGTTGTAT............................................................................................................................................1821250.502501340809331029128
................................................................................................GAGGTAGTAGGTTGTATAGTA........................................................................................................................................212968.001936050201911981045
...............................................................................................TGAGGTAGTAGGTTGTATAGA.........................................................................................................................................212803.00160601330303323847
................................................................................................GAGGTAGTAGGTTGTATAG..........................................................................................................................................192564.001128075708377211
...............................................................................................TGAGGTAGTAGGTTGTATAGTAT.......................................................................................................................................232403.508070880118143458
...............................................................................................TGAGGTAGTAGGTTGTATT...........................................................................................................................................192384.0076811730212205177
...............................................................................................TGAGGTAGTAGGTTGTATAGTTT.......................................................................................................................................232284.50569092084111282
...............................................................................................TGAGGTAGTAGGTTGTATAA..........................................................................................................................................202247.004940400126159169
...............................................................................................TGAGGTAGTAGGTTGTATAGTAAA......................................................................................................................................242202.5040502014266276
...............................................................................................TGAGGTAGTAGGTTGTATAT..........................................................................................................................................202181.00362043012814249
................................................................................................GAGGTAGTAGGTTGTATAGTAA.......................................................................................................................................222174.0034803802542243
...............................................................................................TGAGGTAGTAGGTTGTATAGC.........................................................................................................................................212160.503211909714470
...............................................................................................TGAGGTAGTAGGTTGTATAGTC........................................................................................................................................222103.002064110475688
................................................................................................GAGGTAGTAGGTTGTATAGTT........................................................................................................................................21278.001560910111143
......................................................................................................................................CTATACAATGTGCTAGCTTTCT.................................................................................................22276.00152060025607
...............................................................................................TGAGGTAGTAGGTTGTATTT..........................................................................................................................................20275.001500300374142
...............................................................................................TGAGGTAGTAGGTTGTATAGTG........................................................................................................................................22274.001480270564223
...............................................................................................TGAGGTAGTAGGTTGTATAGG.........................................................................................................................................21266.501334160396410
.................................................................................................AGGTAGTAGGTTGTATAGT.........................................................................................................................................19240.00800590885
...............................................................................................TGAGGTAGTAGGTTGTATAC..........................................................................................................................................20238.007602036353
...............................................................................................TGAGGTAGTAGGTTGTATAGTAG.......................................................................................................................................23230.50610100141621
...............................................................................................TGAGGTAGTAGGTTGTATAGTTA.......................................................................................................................................23230.006006071136
...............................................................................................TGAGGTAGTAGGTTGTATAGTAC.......................................................................................................................................23227.005401011933
..................................................................................................GGTAGTAGGTTGTATAGT.........................................................................................................................................18225.5051012015618
.................................................................................................AGGTAGTAGGTTGTATAG..........................................................................................................................................18224.00480340536
................................................................................................GAGGTAGTAGGTTGTATAGA.........................................................................................................................................20222.504502005317
.................................................................................................AGGTAGTAGGTTGTATAGTA........................................................................................................................................20220.00400330124
................................................................................................GAGGTAGTAGGTTGTATA...........................................................................................................................................18219.00380270326
...............................................................................................TGAGGTAGTAGGTTGTATAAA.........................................................................................................................................21218.503702071315
...............................................................................................TGAGGTAGTAGGTTGTATAGTTAA......................................................................................................................................24217.50350201230
...............................................................................................TGAGGTAGTAGGTTGTAGT...........................................................................................................................................19215.50310100030
......................................................................................................................................CTATACAATGTGCTAGCTTTC..................................................................................................21214.50290606170
...............................................................................................TGAGGTAGTAGGTTGTAA............................................................................................................................................18213.50270409113
................................................................................................GAGGTAGTAGGTTGTATAGTAAA......................................................................................................................................23211.50230401117
...............................................................................................TGAGGTAGTAGGTTGTATTA..........................................................................................................................................20211.5023020867
................................................................................................GAGGTAGTAGGTTGTATAGTAT.......................................................................................................................................22211.00220801013
..............................................................................................TTGAGGTAGTAGGTTGTATAGT.........................................................................................................................................2228.50170160010
...............................................................................................TGAGGTAGTAGGTTGTATAGTAGT......................................................................................................................................2427.5015020247
...............................................................................................TGAGGTAGTAGGTTGTATAGTTC.......................................................................................................................................2327.5015000258
...............................................................................................TGAGGTAGTAGGTTGTATAGAT........................................................................................................................................2227.5015010446
droAna3
AA---------------------------------CCACCCA---------GCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGCAACTAAG-AATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACAATAAGCCGCATTTGA-TTTGAAAA----------T---CC-------------------CC-C-------------------C---CSizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
...............................................................................................TGAGGTAGTAGGTTGTATAGT.........................................................................................................................................211194721.0019472179135257208334542849293
...............................................................................................TGAGGTAGTAGGTTGTATAG..........................................................................................................................................20182378.0082378453536895321271014769
...............................................................................................TGAGGTAGTAGGTTGTATAGTA........................................................................................................................................22141037.00410372009942316978019962
...............................................................................................TGAGGTAGTAGGTTGTATAGTT........................................................................................................................................22110511.001051162970084119091464
...............................................................................................TGAGGTAGTAGGTTGTATAGTAA.......................................................................................................................................2315088.00508812283726713022281
................................................................................................GAGGTAGTAGGTTGTATAGT.........................................................................................................................................2015008.005008466361127150106
...............................................................................................TGAGGTAGTAGGTTGTATA...........................................................................................................................................1914344.00434417120042210811129
...............................................................................................TGAGGTAGTAGGTTGTAT............................................................................................................................................1813561.003561202000768109664
...............................................................................................TGAGGTAGTAGGTTGTATAGA.........................................................................................................................................2113310.0033108070026012351008
...............................................................................................TGAGGTAGTAGGTTGTATT...........................................................................................................................................1913101.003101179010300641369
................................................................................................GAGGTAGTAGGTTGTATAG..........................................................................................................................................1912684.002684262510102721
...............................................................................................TGAGGTAGTAGGTTGTATAGTAT.......................................................................................................................................2311869.00186977800115446530
................................................................................................GAGGTAGTAGGTTGTATAGTA........................................................................................................................................2111477.00147713500077446
...............................................................................................TGAGGTAGTAGGTTGTATAGTTT.......................................................................................................................................2311253.0012538260072235120
...............................................................................................TGAGGTAGTAGGTTGTATAA..........................................................................................................................................201759.007591610177185335
...............................................................................................TGAGGTAGTAGGTTGTATAT..........................................................................................................................................201758.007581680090209291
......................................................................................................................................CTATACAATGTGCTAGCTTTCT.................................................................................................221667.00667302001414337
...............................................................................................TGAGGTAGTAGGTTGTATAGC.........................................................................................................................................211570.005704360100250171
...............................................................................................TGAGGTAGTAGGTTGTATAGTAC.......................................................................................................................................231519.005191580027106228
...............................................................................................TGAGGTAGTAGGTTGTATAGTAAA......................................................................................................................................241434.00434865615110212
................................................................................................GAGGTAGTAGGTTGTATAGTT........................................................................................................................................211380.0038036600356
...............................................................................................TGAGGTAGTAGGTTGTATAGG.........................................................................................................................................211324.0032435005918050
.................................................................................................AGGTAGTAGGTTGTATAGT.........................................................................................................................................191300.00300249370086
...............................................................................................TGAGGTAGTAGGTTGTATAGTG........................................................................................................................................221238.0023810200292681
.................................................................................................AGGTAGTAGGTTGTATAG..........................................................................................................................................181167.0016715800324
...............................................................................................TGAGGTAGTAGGTTGTATAGTC........................................................................................................................................221152.001524600383137
...............................................................................................TGAGGTAGTAGGTTGTATTT..........................................................................................................................................208149.88119966800127290114
......................................................................................................................................CTATACAATGTGCTAGCTTTC..................................................................................................211141.0014169004365
................................................................................................GAGGTAGTAGGTTGTATA...........................................................................................................................................181120.0012011700030
................................................................................................GAGGTAGTAGGTTGTATAGTAA.......................................................................................................................................221110.00110850011311
...............................................................................................TGAGGTAGTAGGTTGTATAGTAG.......................................................................................................................................231103.00103510091132
..................................................................................................GGTAGTAGGTTGTATAGT.........................................................................................................................................181102.0010268150685
................................................................................................GAGGTAGTAGGTTGTATT...........................................................................................................................................181102.0010210000011
.................................................................................................AGGTAGTAGGTTGTATAGTA........................................................................................................................................20192.00928700023
...............................................................................................TGAGGTAGTAGGTTGTATAGTTA.......................................................................................................................................23188.0088270042829
...............................................................................................TGAGGTAGTAGGTTGTATTA..........................................................................................................................................20180.0080340082414
..............................................................................................TTGAGGTAGTAGGTTGTATAGT.........................................................................................................................................22171.00716910010
...............................................................................................TGAGGTAGTAGGTTGTATAAA.........................................................................................................................................21170.0070110012137
................................................................................................GAGGTAGTAGGTTGTATAGA.........................................................................................................................................20163.00635900112
................................................................................................GAGGTAGTAGGTTGTATAGTAT.......................................................................................................................................22156.00565000033
...............................................................................................TGAGGTAGTAGGTTGTATAC..........................................................................................................................................20155.0055150116815
...............................................................................................TGAGGTAGTAGGTTGTATAGTATT......................................................................................................................................24148.0048230041011
...............................................................................................TGAGGTAGTAGGTTGTATAGAT........................................................................................................................................22141.00416001295
...............................................................................................TGAGGTAGTAGGTTGTAA............................................................................................................................................18137.003715001516
...............................................................................................TGAGGTAGTAGGTTGTA.............................................................................................................................................17136.00360003600
...............................................................................................TGAGGTAGTAGGTTGTATG...........................................................................................................................................19136.003612001167
...............................................................................................TGAGGTAGTAGGTTGTATAGTTC.......................................................................................................................................23132.003213001612
...............................................................................................TGAGGTAGTAGGTTGTAG............................................................................................................................................18132.00321100759
...............................................................................................TGAGGTAGTAGGTTGTATAGTAAT......................................................................................................................................24130.003080011110
..............................................................................................TTGAGGTAGTAGGTTGTATAG..........................................................................................................................................21129.00292900000
...............................................................................................TGAGGTAGTAGGTTGTATAGTTAA......................................................................................................................................24126.00266001415
...............................................................................................TGAGGTAGTAGGTTGTATAGCT........................................................................................................................................22123.00231003127
...............................................................................................TGAGGTAGTAGGTTGTAGT...........................................................................................................................................19221.004260051219
.................................................................................................AGGTAGTAGGTTGTATAGTT........................................................................................................................................20121.00211900200
................................................................................................GAGGTAGTAGGTTGTATAGTTT.......................................................................................................................................22320.67625800031
................................................................................................GAGGTAGTAGGTTGTATAGC.........................................................................................................................................20120.00203170000
..................................................................................................GGTAGTAGGTTGTATAGTA........................................................................................................................................19119.00191400410
...............................................................................................TGAGGTAGTAGGTTGTATC...........................................................................................................................................19119.0019400357
.......................................................................................................................................TATACAATGTGCTAGCTTTCT.................................................................................................21118.00181100007
...............................................................................................TGAGGTAGTAGGTTGTATAGTGT.......................................................................................................................................23118.00181000044
...............................................................................................TGAGGTAGTAGGTTGTATAGTTTT......................................................................................................................................24318.00544300263
...............................................................................................TGAGGTAGTAGGTTGTATCT..........................................................................................................................................20118.0018300267
..............................................................................................TTGAGGTAGTAGGTTGTATAGTA........................................................................................................................................23117.00171700000
droBip1
AA---------------------------------CCACCCA---------GCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGCAACTAAG-AATCGTACTATACAATGTGCTAGCTTTCTTTGCTTGACAATAAGCCGCATTTGA-TTTCAA-A--------TAT-TCCC-------------------CA-ATGGA---G----------TT---CSizeHit CountTotal NormTotal
No Reads
droKik1
AA---------------------AAT---------CCACCCA---------GCAAAAGGGACTA-AACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCAATTTAATCCAAGAA----------A---C------------------------------------------CA---CSizeHit CountTotal NormTotal
No Reads
droFic1
AA---------------------AAACCAAA----CCACCCA---------GCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCAATTGA-TTAAAA-C--------T-----CC-------------------CA-ATCGAACTT----------CACCGCSizeHit CountTotal NormTotal
No Reads
droEle1
TA---------------------AAACCAAACCA-CCACCCA---------GCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACT-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCAATTGC-TTTAAA-C--------T-----CC-------------------CT-ATCGATCTG----------CA---CSizeHit CountTotal NormTotal
No Reads
droRho1
AA---------------------AAACCAAACCA-CCACCCA---------GCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCAATTGA-TTAAAA-C--------T-----CC-------------------CA-ATCGAAGTG----------CA---CSizeHit CountTotal NormTotal
No Reads
droBia1
CA---------------------A------A----CCACCCA---------GCAAAAAGGACT--CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCACAATTGA-TTTAAA-C--------T-----CC-------------------CA-ATC-AGCTG----------CA---CSizeHit CountTotal NormTotal
No Reads
droTak1
--------------------------------------CCCA---------GCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCAATTGA-TTAAAA-C--------T-----CC-------------------CA-ATCGAATTG----------CA---CSizeHit CountTotal NormTotal
No Reads
droEug1
AA---------------------A-ACCAAA----CCACCCA---------GCAAAAAGGACTA-CACT-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAACTACA-AATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTATTAGCCGCAATTGA-TTTAAA-C--------T-----CC-------------------CA-ATCGAACTG----------CA---CSizeHit CountTotal NormTotal
No Reads
dm3
AA----------------------------A----CCACCTA---------GCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCATTTGA-TAAAAGAA----------T---CC-------------------CA-ATCGAACTG----------CA---CSizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
...............................................................................................TGAGGTAGTAGGTTGTATA...........................................................................................................................................19115654942.00156549420000000000000012000001020291180405339631601575182100531135463611417376041793945461255551124313710523185913600011910953000000000000000001121931500000006111772329128264202015114320501904390180511417812091811801581802784619321111956421242202400120113217010001736273824460102523111001400007937950402801344151625359727347502011729338115179645451711670146005002438193418621001420296820310053213035191000015981844210041211881071751371081151261000117002001351012383022225100281502117562010019238000287110011767634145103647494521221231992557140333418656734126593412822198521136305233653722533343004356809808495415467349824929027211628722956901814373399333234781102350646
...............................................................................................TGAGGTAGTAGGTTGTATAGT.........................................................................................................................................2115151085.00515108510101485300051062169703358238100046971714606042011751452654848441100577383121114181313007559123381317338995271314812249129629062344546614006160002903101500000000000000000019220315812521355551221232307420542975078186118011247469712773397507239013549589648313961891903473410351685132157559248276051463721030101156872381062784257361918013611133913654071238155363260152133964582640612681016203341338117930100030312213373815842197590149741046139381376662210084348216508162922688411542613112304305840472261145801944423702549624851566611015930281312109645316747585115812318311081293746611209225443316727409155352410136890321242773039866343019977200192114504817313429845712243140853513779286440133404792023017193130596813745042462641561420314415896939617533431206985764632246524112225257835525019691924478810843322325770197680244819522827259222066387414943394471175125829712816713259730135526308518897917429698544301000267141174082366566108611563311123791760661526413656332106846141479120288513915023206671
...............................................................................................TGAGGTAGTAGGTTGTATAGTA........................................................................................................................................2211591263.00159126300002867912124734730221020110275380396105603219109297446284438706959052210874613774021284511552530276731878810144487619957732620002282001350000000000000000032283825346217720112222271012769117672923413251024263613756996332103202691625571298622894307259167834819821721794238019226819648746363357194315618161969000020600000117312147613094127830091322611572113301488738000007635245493056860407329213411894524536309434950763616590568112920370488713379478214527733331876396927211582512901620033537905340692172821113347814530055804211608512599185722244761081593816564270182574150300106018277799220531122680292962715701134711644568858541518634310636130482014005294335051295769152263700542523001936643298138153164747771251894905540108122928749756466140273794989562206225560243503129130596114425244434954348813926311670393105963475413279719023434063073461175956488529440150073444828741191537935127
...............................................................................................TGAGGTAGTAGGTTGTATAG..........................................................................................................................................2011443865.00144386500007396900107160492020901181665074061028268104162324141683343653167273205141133762528241092821913981474424441321224124000290025011245000000000000000003438322394515531101011122513216718118802516572868200566492146744063438289354379672879153141292035284974377492201482149449124843401297945411320340004083143925845125325898957165314379207010306231041221598481290533331121608509519536061361131710215580460143240051821234108676498192600264143675313236900716050394523453727203110012282434495723195347727124712331430442957297470052716003001888151263732221837135062535903826125832240242244260516401718369121101135302261015679076327823827165912361096118973016899622104974667381283945461251291876176913928507952182546113007710428401484760932160371101815966837158545123559834243266657481940316391231554684354695202988922774284299913229402907
...............................................................................................TGAGGTAGTAGGTTGTATAGTATC......................................................................................................................................241522807.00522807000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000008000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000034587117687700000000000000000000000000000000000010000001000001000001001000000010001000100230010513111210000000
...............................................................................................TGAGGTAGTAGGTTGTATAGTAA.......................................................................................................................................231254285.0025428500007512000051600102205252416043000000002819241420161032283051235647203752230000000000000000000000046425736012101051422622312022902254468512622351058526247717742147022352313905252376221232511623001624528100000100000021024317969152455945372403900000600000647858053661166487132641265509532100210414359811398234131677381452127100112983771653270000016785733760894558735351396649587975050021343651001001971402457012423994361160083161470450163161021160511071345792071178532399343629490113522116363458074374968501181690117749901221312990421764543320552014696081941299932852537731744228940241749939412220921172454441793028972476897868583111317111
...............................................................................................TGAGGTAGTAGGTTGTAT............................................................................................................................................181240869.002408690000000000000016001003847800051441313431657308996421423214592085123403166573533410008563520000000000000000046237010000001030120426421573971017271067517015225913301628192126995100171104021023393872725311900000393000001115911830411511002600000114211004046211722565914710446349303214144591296721115294013030057647481732710011802823002000013402820000028119268438414677943528283110000000000796491810112441301841002025310011281680211673100745193020240386382580029920425217438040977373207415151587660156439313321761466210701171227510803193921101050721322723722755221617781191950120800
................................................................................................GAGGTAGTAGGTTGTATA...........................................................................................................................................181201612.002016120000000000000000000000000006839188592884440391062921265216400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000303023363000000040100000000000000000000000000140315470746701136030321419119894203000000000000000000000000000300000000000000000000000000000000000000000000000000000003000002000000000065137000000000020050000000001110000312202140000014
...............................................................................................TGAGGTAGTAGGTTGTATAGATC.......................................................................................................................................231145827.00145827000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010127744549000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
...............................................................................................TGAGGTAGTAGGTTGTATAGTT........................................................................................................................................22169522.00695220000160000001304001207615154083000000010761159971853623815333184610700000000000000000000000532343874140257018360976313123232291132261292873190609891527228731022546731752151122420600000100000110017212332273751019251300010122290011292417040311823971231576075868182370110125255422402513010063511310002456368214417123001365461422012874511543513134362253180001181400003175726220001922880167200112592020110850102771000115599482441027043931400410860435893774237645840196260635631273658820317116422089196701250451555249231224780417396354614868989937014758611376133591140065
...............................................................................................TGAGGTAGTAGGTTGTATAGA.........................................................................................................................................21144777.0044777000084120000511010011022111102100000000043101731181831316392200000000000000000000000000069100000021016210256370014515501202620303362601601509221162753336500010000002000045710811131750000000003013317601080026106277428044363400000891617105180003301198020005176020000003025715822051683714573583866000014286530000018335600094143097300004292011048200096000037303362052621618127000705692041166110271573204452705405127210761681061297106512850013819630040493155702930621079027559857316769792213351398302600
...............................................................................................TGAGGTAGTAGGTTGTATAGTAT.......................................................................................................................................23138634.00386340000131000000200000000344000000000002201100453119425310000000000000000000000011003170600000732744804293001614256120260143313050593163715054170371243100000000000000082110216103541220000010000067880920033812403147020101700008269915312000522141102101132100200000017105255118122170125189142128181100038521600000152951010055103054000011651011002300013802006043620913741352387003572221605142098816580120312622471283706919374526784669000155267299188318156405163540608042688073311338831510949331113000
...............................................................................................TGAGGTAGTAGGTTGTATAA..........................................................................................................................................20125375.0025375000055200000140100010043800000000001011112021211112621000000000000000000000000100213000000010591072112910241627131608310101500504110702060434471510000000800000142306310120000000010085113060102253918281913501532000008561250800013038100000016303000000101132671141265111381100007100000035264910047147068100001781000025501052000015104736129156300040185110786175515780015912141663356183755316745864900346710818663168384457116631202073201745223362762759500400
...............................................................................................TGAGGTAGTAGGTTGTATAGTAAA......................................................................................................................................24120722.002072200006110001000000000001002000000000211021457243284262000000000000000000000001120110000001811813190195100191178200601104030119015504044701731319000000000000000159810324813000000000004263029008262220420511000001823476160003287000000363401010020048836471021074470881627193000012654000001475500013230291000011600000029000631000462712687352152817000164585464962263743013092066752057517231825940533400122189189206281274205130020122211787403721633291896435732001100
......................................................................................................................................CTATACAATGTGCTAGCTTTCT.................................................................................................22119843.00198430000205000010305310103516148000110169327851637100173447415917622213302027345951409000239800000000000000000411126200000072341642931267914600208160400110202406614122101002084286630220911220195573100010000000000085836232114539484531000000040003327990271270128461883619719034865121826700000180402228121600300181000000113000100000047109131332710140427630811029229910000000011732942520972051114700411031125199903816661000281511987222164715700111236228233836045600181571463162143620892710121494176444418821415752026616328987461424614390015029
...............................................................................................TGAGGTAGTAGGTTGTATT...........................................................................................................................................19119491.001949100000000000000100000017901000000001002021220400014401000000000000000000000000000140000000000700187300001331001009300009168402031204112449421001000005600000100123000010000000000038790354831631561073213954411721388000003456233000170200000004200600000033329416301416135271000000100000121323000151651401000022000102150102311001147315145452200110255756342584124200744222391021610231362804210015487270402628315120121013805935998160279385461000200
..............................................................................................TTGAGGTAGTAGGTTGTATA...........................................................................................................................................20118482.0018482000000000000000000000000000743181821743677151984207400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000310000000000000000000000000000000000000018398820861246040921520000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TGAGGTAGTAGGTTGTATAGG.........................................................................................................................................21118030.001803000001220000111000040010130000000000116000213731011618131400000000000000000000000000010000000000350150400853600021152000070510313270291153900000000000000043335184250000000000009881059003743110566386591080000046411350002211300000270020010001537156541354210000210000014863000293804600010850000032200065000013110475609889394600317247025234688206924000131970609895410360738373981734003121120107245500200652134715153225000000
...............................................................................................TGAGGTAGTAGGTTGTAA............................................................................................................................................18115896.0015896000000000000001000000000000000000000000000000000100000000000000000000000000001004000000000060053500001810060001010030500000000411011772021000001090000000000400000000000000061605199494621797600053725982702513000006032000020300000000000000000002100200030100002000000212000021300000007000000200010000040241600000522144951222100061104002104353356000450000132008010034310316492773000000
...............................................................................................TGAGGTAGTAGGTTGTATAGC.........................................................................................................................................21115755.00157550000235000022207000000201600000000000062151270007135511000000000000000000000000000930000001402201324290066558042048102041902050303270191121400000000000100028754447893000000000009310006300192701919715195501000085654612300170388001010120010000001574407712511611107160000105000000109310029400372010083000004190005100007579641273434941821700492337878105450187900174128226332826714014485843853055800791231475160291803292020814611245474115208279219000401
...............................................................................................TGAGGTAGTAGGTTGTATG...........................................................................................................................................19112317.00123170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000001000000000000001914300000002020000000000100002007300000043011861859013262865488250680200000000011000000000000011000000000013001103000000000000001000024010000020000001000100001300010000006171415270020010000908900001000005500601196123857000001644
...............................................................................................TGAGGTAGTAGGTTGTATC...........................................................................................................................................1919686.0096860000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000700000020000000100010012000000001323148115100000014300000000000000000000000000340243454740494131416819970140000001020000010100000000000000000000110000000000036270000001700000502000000000000100000000030017010000828975900870211151631119210001000001820040221242335811000005
...............................................................................................TGAGGTAGTAGGTTGTATAT..........................................................................................................................................2018687.008687000010000000000000000141170110000000306030071030311211130000000000000000000000000001500000000163050250000340001003101001422611200100441241360220000000000100000340571040021000000000013042033013203622804843000001722203000001930000003101000000016810352315340000320000096133800089940331001225606000270002611006310824131800051454613462556310110262214191635175301802120031720202012585000430393124029652738098100000
...............................................................................................TGAGGTAGTAGGTTGTATAGTC........................................................................................................................................2217442.0074420000310000100000000000030000000000013402065221330729221100000000000000000000000000020000000000073182800112800000131000012011396019033120115414879000001000000000434221011103000000000103420025100130140112164000002111800001115000000350110000003239217825525900001405900000201456100252803210011741000015000950000121721241118121220008609993564910059410293014925748741458402346011828353020266418410101017447517825469576001300
...............................................................................................TGAGGTAGTAGGTTGTATAGTAC.......................................................................................................................................2316780.006780000020000000000000000120000000000003152100301322833210000000000000000000000000001000100000000060510022010000020010010203000318020097000000000000000254101422300000010000091506003112701601200000091332770003021130000068000000000532142824211133283032300000849474000002311000101101000000360000008000290000156322398346200044010593541330039230164784366014396959600664970514138853900025413669114116377227197200600
................................................................................................GAGGTAGTAGGTTGTATAGT.........................................................................................................................................2015331.005331000010000010000000001005010031616521512001013010502352000011100000000000000000000040000000002140225102000717630010430010190248110121214463230000104000000000334444218310000000000090930772018102380412671931120000064111523006110180000314000000000625122036212127242422310000000000002600001180700010420000011200022000049308766108512490016471441651012250056450212376636603964810068831112210207315800450134382142258079910011017
...............................................................................................TGAGGTAGTAGGTTGTATATC.........................................................................................................................................2114741.0047410000000000000000000000000000000000000000010000000200000000000000000000000000000001000000000100000000000000000000000000000000020142000000000100000001000000000000000000310200011000000000000000000000000000000000000000000100000000000033391257000000100001201000001100000100000000216020100400002141700200551101724700000000000000001520002000000
...............................................................................................TGAGGTAGTAGGTTGTATAGTTT.......................................................................................................................................2313927.003927000031000000000000100001000000000001000000100001000000000000000000000000000000003010000001014101111200004322020401000090194060519117011180000010000000001410014000000000000000151202100320020162082239000016625100000700000012518000000028471732217113513190000100000033720005110600000800100020001200002241912831100041825221518927200471814641346842493880067211010920690010038671121128226174000100
......................................................................................................................................CTATACAATGTGCTAGCTTTC..................................................................................................2113614.003614000050000000300130001032100020297642022023902028042133205200023000000000000000000000030000000022801217150024136500530163733108111313040102011133000000000000000191606220200000000000441110333822102685631451572479000002785513002030000000000000000082445231030202310141900000000000911070010780180013041000217160005580000327628833103200145231605971860014261129486242300133821003436236002701053219471938000500
..................................................................................................GGTAGTAGGTTGTATAGTATC......................................................................................................................................2112989.00298900000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002014975000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TGAGGTAGTAGGTTGTATAGTG........................................................................................................................................2212975.0029750000610000002000000001000000000000000002001700100271800000000000000000000000000000200000000238115230012722000102712001122422090561309358000011000000000401541212000000000000017210216436914289262256000008221200005090000001300400000073812235504132680000100000012411000221401701000420000004000161000731147393260002208110788188106331014112672254309495001848380011185111900540105399729216237000100
...............................................................................................TGAGGTAGTAGGTTGTATAC..........................................................................................................................................2012503.002503000081000000000000000000000000000020000000000010001020000000000000000000000000001000000000010001000004000000000100505000000001706500000000000000000100900010000000000051101024610601322774727050500000011001000001060000000000000100006462552233800001640000019100065020000040000013000100005531176220900082662564420700131204216310287314743000053010316170017030159436151735000000
...............................................................................................TGAGGTAGTAGGTTGTATAGTAG.......................................................................................................................................2312487.00248700000100000000000000010000000000000000020001000000100000102123410000000000000000000001100000001031114270000700010100000040960301110030530000000000000000111231111000000000006100100037190100191000001411500000114000000140000000003456152291017810140000010000002410002605100001800000020001400004434234256310011181651598312900221701472431237225545001516161000132215300400853097112183839001100
...............................................................................................TGAGGTAGTAGGTTGTATAAA.........................................................................................................................................2112452.002452000003000000000000000000000000000000000000101000102000000000000000000000000000004500000000001690040000000190000020000120610001000302000000000000000000000500000000000000041048017643707000000300210000020000000100000000001126123314040000114000000120000280200000910000020004000051503250300048763345900015401152034018373900241133002022350071122370123839357681300000
...............................................................................................TGAGGTAGTAGGTTGTATTT..........................................................................................................................................2012083.0020830000100000000000000000030000000000010000001010000110000000000000000000000000000030000000000300201000000000000000000050000010070351200020000000000000000200000000000000062805001212033016100000510100001090000000000000000002501312010100000000000011610002340400000210000000005000023013140100012579387213600731510301301254900194100023015009026070510811312342100000
................................................................................................GAGGTAGTAGGTTGTATAGTA........................................................................................................................................2111958.00195800001100000000000000002100012422261100020002200010110100002140000000000000000000100000000001202022100911400520261000000510070326012011130000000000000001626280400000000000001422010212325242223250000001500112000105000000020050000015621020811611418180000710000033000002010000060000003000190000231112117555320005282541245700117131857625203733320042476820021232152002106515529452127000000
................................................................................................GAGGTAGTAGGTTGTATAGTATC......................................................................................................................................2311735.00173500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001347388000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................GAGGTAGTAGGTTGTATAG..........................................................................................................................................1911734.001734000000000000000000000005000012282510100000000000000100000013940000000000000000000001000000000020011230014300000040000041110000320031215250000000000000000001012000000000000000424602000102933017401261500000350110000000000000400010000001921513460061000000000001300003102000008000000300040000873386232110001317162551220033140851027158273900610170001415160013027933232922150000048
.................................................................................................AGGTAGTAGGTTGTATAGT.........................................................................................................................................1911620.0016200000000000000000000010010000000000000000011000013101000000000000000000000000000010000000000000401000010000003200000001010000000100000000000000003113151020000000000009140100002202014221940000071182000501000001200000000000622103010011130000000006000013020000070000001000000005529711143041400022484126701500013301021015836160001470000311150011023186388191513000000
droSim2
ATGATATCCAGAAGATCCTTTAAAAACCAAA----CCACCTA---------GCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCATTTGA-TTAAAGAA----------C---CC-------------------CA-ATCGAACTG----------CA---CSizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
...............................................................................................TGAGGTAGTAGGTTGTATAGT.........................................................................................................................................211527515.0052751527574205947415420467815424841937952725393647429203542527853733
...............................................................................................TGAGGTAGTAGGTTGTATAGTA........................................................................................................................................221341932.003419328063823728489217664289559505236588214344262236517941521863
...............................................................................................TGAGGTAGTAGGTTGTATAG..........................................................................................................................................201147099.00147099543337801256865449225511348311937561421015306373525004
...............................................................................................TGAGGTAGTAGGTTGTATAGTT........................................................................................................................................22129842.0029842662780153200128772717987710289722619000
...............................................................................................TGAGGTAGTAGGTTGTATAGTAA.......................................................................................................................................23127738.002773826940814140030512828944023209618245053
...............................................................................................TGAGGTAGTAGGTTGTATA...........................................................................................................................................19113183.001318322781199522110733922650499109081742350011
...............................................................................................TGAGGTAGTAGGTTGTAT............................................................................................................................................1818520.008520140145141281339421519818223157118421000
...............................................................................................TGAGGTAGTAGGTTGTATAGTAT.......................................................................................................................................2314773.004773369308600659573301301533155002
...............................................................................................TGAGGTAGTAGGTTGTATAGG.........................................................................................................................................2113294.00329413481495422100626400100882000
...............................................................................................TGAGGTAGTAGGTTGTATAGTTT.......................................................................................................................................2312538.0025383056034002932117202502087000
...............................................................................................TGAGGTAGTAGGTTGTATAGA.........................................................................................................................................2112399.0023993572951135003031970066055990000
...............................................................................................TGAGGTAGTAGGTTGTATT...........................................................................................................................................1912132.0021321039466254008429607010435000
...............................................................................................TGAGGTAGTAGGTTGTATAGC.........................................................................................................................................2111879.001879108964501000343600160742000
................................................................................................GAGGTAGTAGGTTGTATAGT.........................................................................................................................................2011244.00124412140848428623230120012162001
...............................................................................................TGAGGTAGTAGGTTGTATAGTAAA......................................................................................................................................2411229.001229661140320092917025087714100
...............................................................................................TGAGGTAGTAGGTTGTATAA..........................................................................................................................................201789.0078962410470057380023017504000
...............................................................................................TGAGGTAGTAGGTTGTA.............................................................................................................................................171758.00758000000215154313700213000
...............................................................................................TGAGGTAGTAGGTTGTATAGTAG.......................................................................................................................................231707.0070710042014208160050645001
...............................................................................................TGAGGTAGTAGGTTGTATAGTTA.......................................................................................................................................231525.00525122050015910700166299000
................................................................................................GAGGTAGTAGGTTGTATAGTA........................................................................................................................................211479.0047934025013262521006081130010
................................................................................................GAGGTAGTAGGTTGTATAG..........................................................................................................................................191472.0047232028036116120030227000
...............................................................................................TGAGGTAGTAGGTTGT..............................................................................................................................................161440.0044000000045147408011000
......................................................................................................................................CTATACAATGTGCTAGCTTTCT.................................................................................................221428.00428482423210710327380082828001
...............................................................................................TGAGGTAGTAGGTTGTATTT..........................................................................................................................................201408.004085940015007120105278000
...............................................................................................TGAGGTAGTAGGTTGTATAGTAC.......................................................................................................................................231376.0037618015303006600100116010
....................................................................................................TAGTAGGTTGTATAGT.........................................................................................................................................161269.0026900000096942077000000
...............................................................................................TGAGGTAGTAGGTTGTATAGTG........................................................................................................................................221258.0025819310600680028011148001
...............................................................................................TGAGGTAGTAGGTTGTATAT..........................................................................................................................................201252.00252302602300231100304132000
....................................................................................................TAGTAGGTTGTATAGTA........................................................................................................................................171232.0023200000087900055000000
...............................................................................................TGAGGTAGTAGGTTGTATAGTC........................................................................................................................................221221.002218738010041700901055000
..................................................................................................GGTAGTAGGTTGTATAGT.........................................................................................................................................181177.001771113070182300114000000
...............................................................................................TGAGGTAGTAGGTTGTAC............................................................................................................................................181127.0012710225000000000000000
.................................................................................................AGGTAGTAGGTTGTATAGT.........................................................................................................................................191109.001092780490264004009000
...............................................................................................TGAGGTAGTAGGTTG...............................................................................................................................................151101.00101000000202194002000
......................................................................................................................................CTATACAATGTGCTAGCTT....................................................................................................19195.00950000365800001000000
..................................................................................................GGTAGTAGGTTGTATAGTA........................................................................................................................................19194.009485010014130052000001
...............................................................................................TGAGGTAGTAGGTTGTATAC..........................................................................................................................................20179.00794620000022003006000
.....................................................................................................AGTAGGTTGTATAGT.........................................................................................................................................15177.00770000005110061000000
.....................................................................................................AGTAGGTTGTATAGTA........................................................................................................................................16174.007400000014140046000000
......................................................................................................................................CTATACAATGTGCTAGCT.....................................................................................................18174.00740000314300000000000
..............................................................................................TTGAGGTAGTAGGTTGTATAG..........................................................................................................................................21173.00730001039000000546000
...................................................................................................GTAGTAGGTTGTATAGT.........................................................................................................................................17170.0070000000030067000000
...............................................................................................TGAGGTAGTAGGTTGTATC...........................................................................................................................................19165.00654319000000001002000
...............................................................................................TGAGGTAGTAGGTTGTATAAA.........................................................................................................................................21163.006313150600200010125000
......................................................................................................................................CTATACAATGTGCTAGCTTTC..................................................................................................21162.00626204162922001000000
................................................................................................GAGGTAGTAGGTTGTATAGTT........................................................................................................................................21161.00610003000100000228000
...................................................................................................GTAGTAGGTTGTATAGTA........................................................................................................................................18159.0059040002251045000000
.................................................................................................AGGTAGTAGGTTGTATAGTA........................................................................................................................................20153.00531110900715007003000
...............................................................................................TGAGGTAGTAGGTTGTATAGTAAC......................................................................................................................................24146.00462811300001001011000
................................................................................................GAGGTAGTAGGTTGTATA...........................................................................................................................................18145.00451001571701002002000
......................................................................................................GTAGGTTGTATAGTA........................................................................................................................................15144.0044000000260036000000
...............................................................................................TGAGGTAGTAGGTTGTAA............................................................................................................................................18143.0043166080042002005000
................................................................................................GAGGTAGTAGGTTGTATAGTAA.......................................................................................................................................22141.00411002200000010215000
...............................................................................................TGAGGTAGTAGGTTGTATAGTTAA......................................................................................................................................24138.0038210000100000826000
.............................................................................TTTTTCTCTCTGGCAAAT..............................................................................................................................................................18137.0037334000000000000000
....................................................................................................TAGTAGGTTGTATAG..........................................................................................................................................15136.003600000011140011000000
...............................................................................................TGAGGTAGTAGGTTGTATTA..........................................................................................................................................20234.506927160300340000214000
....................................................................................................TAGTAGGTTGTATAGTAA.......................................................................................................................................18231.00620000001834109000000
...............................................................................................TGAGGTAGTAGGTTGTATAGTATA......................................................................................................................................24131.0031120100000000027000
..................................................................................................GGTAGTAGGTTGTATAG..........................................................................................................................................17129.0029000000150022010000
.................................................................................................AGGTAGTAGGTTGTATAG..........................................................................................................................................18127.0027210162210001002000
...............................................................................................TGAGGTAGTAGGTTGTATATA.........................................................................................................................................21125.0025400200250000111000
...............................................................................................TGAGGTAGTAGGTTGTATAGTAGT......................................................................................................................................24124.0024200051402000001000
............................................................................CTTTTTCTCTCTGGCAAAT..............................................................................................................................................................19124.0024194000000001000000
...............................................................................................TGAGGTAGTAGGTTGTATG...........................................................................................................................................19123.002364020000002009000
..............................................................................................TTGAGGTAGTAGGTTGTATAGT.........................................................................................................................................22122.0022000160500000001000
...............................................................................................TGAGGTAGTAGGTTGTATAGTGC.......................................................................................................................................23121.0021000000000021000000
...............................................................................................TGAGGTAGTAGGTTGTATAGGT........................................................................................................................................22121.0021000500200020210000
droSec2
AA---------------------AAACCAAA----CCACCTA---------GCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCATTTGA-TTAAAGAA----------C---CC-------------------CA-ATCGAACTG----------CA---CSizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
...............................................................................................TGAGGTAGTAGGTTGTATAGT.........................................................................................................................................211387183.0038718369404167505127150147
...............................................................................................TGAGGTAGTAGGTTGTATAG..........................................................................................................................................20189796.008979621372309812337420
...............................................................................................TGAGGTAGTAGGTTGTATAGTA........................................................................................................................................22187438.008743820052393132328050
...............................................................................................TGAGGTAGTAGGTTGTATAGTAA.......................................................................................................................................23118084.00180841395988056804
...............................................................................................TGAGGTAGTAGGTTGTATAGTT........................................................................................................................................2219587.0095872518439602673
...............................................................................................TGAGGTAGTAGGTTGTATA...........................................................................................................................................1917160.007160752215504253
...............................................................................................TGAGGTAGTAGGTTGTATAGA.........................................................................................................................................2115691.005691514282202355
................................................................................................GAGGTAGTAGGTTGTATAGT.........................................................................................................................................2014122.00412238191780125
...............................................................................................TGAGGTAGTAGGTTGTATAGTAT.......................................................................................................................................2313452.00345239920660987
...............................................................................................TGAGGTAGTAGGTTGTAT............................................................................................................................................1812554.0025544713712045
...............................................................................................TGAGGTAGTAGGTTGTATAA..........................................................................................................................................2012333.0023338989221350
...............................................................................................TGAGGTAGTAGGTTGTATT...........................................................................................................................................1912282.00228240178621093
...............................................................................................TGAGGTAGTAGGTTGTATAGTAAA......................................................................................................................................2411628.001628908800658
................................................................................................GAGGTAGTAGGTTGTATAGTA........................................................................................................................................2111202.001202111349040
......................................................................................................................................CTATACAATGTGCTAGCTTTCT.................................................................................................2211150.0011505801291440
................................................................................................GAGGTAGTAGGTTGTATAG..........................................................................................................................................1911144.001144107927038
...............................................................................................TGAGGTAGTAGGTTGTATAGG.........................................................................................................................................2111057.00105798335039
...............................................................................................TGAGGTAGTAGGTTGTATTT..........................................................................................................................................201835.008351354501249
...............................................................................................TGAGGTAGTAGGTTGTATAGTTT.......................................................................................................................................231731.007311723670192
...............................................................................................TGAGGTAGTAGGTTGTATAT..........................................................................................................................................201728.007281183090301
...............................................................................................TGAGGTAGTAGGTTGTATAGC.........................................................................................................................................211574.00574422852245
...............................................................................................TGAGGTAGTAGGTTGTATAGTAC.......................................................................................................................................231361.00361251951140
......................................................................................................................................CTATACAATGTGCTAGCTTTC..................................................................................................211328.00328115500163
...............................................................................................TGAGGTAGTAGGTTGTATTA..........................................................................................................................................201292.00292151250152
...............................................................................................TGAGGTAGTAGGTTGTATAAA.........................................................................................................................................211287.0028791410137
.................................................................................................AGGTAGTAGGTTGTATAGT.........................................................................................................................................191231.0023116824039
...............................................................................................TGAGGTAGTAGGTTGTATAGTG........................................................................................................................................221209.0020932520125
...............................................................................................TGAGGTAGTAGGTTGTATAGTC........................................................................................................................................221180.001802388069
................................................................................................GAGGTAGTAGGTTGTATAGTT........................................................................................................................................211141.00141134403
................................................................................................GAGGTAGTAGGTTGTATAGTAA.......................................................................................................................................221123.001239814011
...............................................................................................TGAGGTAGTAGGTTGTATAGTTA.......................................................................................................................................231120.001201069041
...............................................................................................TGAGGTAGTAGGTTGTATAGTAG.......................................................................................................................................231114.001142239053
...............................................................................................TGAGGTAGTAGGTTGTATAC..........................................................................................................................................201111.001111242057
...............................................................................................TGAGGTAGTAGGTTGTATAGAT........................................................................................................................................221100.00100268030
.................................................................................................AGGTAGTAGGTTGTATAGTA........................................................................................................................................20184.008474505
.................................................................................................AGGTAGTAGGTTGTATAG..........................................................................................................................................18182.0082651016
...............................................................................................TGAGGTAGTAGGTTGTATC...........................................................................................................................................19175.0075134040
...............................................................................................TGAGGTAGTAGGTTGTAA............................................................................................................................................18170.0070141154
...............................................................................................TGAGGTAGTAGGTTGTATAGTTAA......................................................................................................................................24166.0066037029
..............................................................................................TTGAGGTAGTAGGTTGTATAGT.........................................................................................................................................22152.005252000
................................................................................................GAGGTAGTAGGTTGTATA...........................................................................................................................................18144.004440004
......................................................................................................................................CTATACAATGTGCTAGCTTT...................................................................................................20143.0043149020
...............................................................................................TGAGGTAGTAGGTTGTATATA.........................................................................................................................................21137.0037181108
...............................................................................................TGAGGTAGTAGGTTGTATG...........................................................................................................................................19137.0037219016
................................................................................................GAGGTAGTAGGTTGTATAGTAT.......................................................................................................................................22135.003531301
.......................................................................................................................................TATACAATGTGCTAGCTTTCT.................................................................................................21134.003431102
..................................................................................................GGTAGTAGGTTGTATAGT.........................................................................................................................................18133.003322407
...............................................................................................TGAGGTAGTAGGTTGTATAGTGA.......................................................................................................................................23129.0029112016
...............................................................................................TGAGGTAGTAGGTTGTATTC..........................................................................................................................................20127.0027113013
...............................................................................................TGAGGTAGTAGGTTGTATCT..........................................................................................................................................20127.0027214011
................................................................................................GAGGTAGTAGGTTGTATAGA.........................................................................................................................................20126.002621302
...............................................................................................TGAGGTAGTAGGTTGTATAGGT........................................................................................................................................22126.002623300
...............................................................................................TGAGGTAGTAGGTTGTATAGTATA......................................................................................................................................24124.002411706
...............................................................................................TGAGGTAGTAGGTTGTATAGTTC.......................................................................................................................................23123.002339011
...............................................................................................TGAGGTAGTAGGTTGTATAGTACA......................................................................................................................................24122.002211506
...............................................................................................TGAGGTAGTAGGTTGTAGT...........................................................................................................................................19420.5082349030
...............................................................................................TGAGGTAGTAGGTTGTATAGTAAC......................................................................................................................................24120.002031205
...............................................................................................TGAGGTAGTAGGTTGTAC............................................................................................................................................18119.001900019
...............................................................................................TGAGGTAGTAGGTTGTATAGTAAG......................................................................................................................................24116.00163805
..............................................................................................TTGAGGTAGTAGGTTGTATAG..........................................................................................................................................21116.001616000
droYak3
AA---------------------AAACCAAA--A-CCTCCTA---------GCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCATTTGA-TTAAAGAA----------T---CC-------------------CA-ATCGAACCG----------CA---CSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
...............................................................................................TGAGGTAGTAGGTTGTATAGT.........................................................................................................................................211184175.001841752129769150221216312289984834404432
...............................................................................................TGAGGTAGTAGGTTGTATAG..........................................................................................................................................20153716.0053716409623385035969101291011300021
...............................................................................................TGAGGTAGTAGGTTGTATAGTA........................................................................................................................................22138427.00384277802160134141733313397140680
................................................................................................GAGGTAGTAGGTTGTATAGT.........................................................................................................................................2015047.00504754972130820290000
...............................................................................................TGAGGTAGTAGGTTGTATA...........................................................................................................................................1914970.00497023059550026947893600027
...............................................................................................TGAGGTAGTAGGTTGTATAGTT........................................................................................................................................2214255.0042555722014102485668540000
...............................................................................................TGAGGTAGTAGGTTGTATAGTAA.......................................................................................................................................2313961.0039612648480323644621610120
...............................................................................................TGAGGTAGTAGGTTGTAT............................................................................................................................................1811848.001848444579002654683000062
................................................................................................GAGGTAGTAGGTTGTATAG..........................................................................................................................................1911414.001414013960034110000
...............................................................................................TGAGGTAGTAGGTTGTATAGG.........................................................................................................................................2111364.001364122338003554140000
...............................................................................................TGAGGTAGTAGGTTGTATAGA.........................................................................................................................................2111324.001324252325001002583890000
...............................................................................................TGAGGTAGTAGGTTGTATT...........................................................................................................................................1911164.00116450127400811331750000
...............................................................................................TGAGGTAGTAGGTTGTATAGC.........................................................................................................................................2111163.001163929301028107680000
................................................................................................GAGGTAGTAGGTTGTATAGTA........................................................................................................................................2111096.001096410760014110000
...............................................................................................TGAGGTAGTAGGTTGTATAGTAT.......................................................................................................................................2311061.0010613931700481045530000
...............................................................................................TGAGGTAGTAGGTTGTATAA..........................................................................................................................................201494.00494476500571042210000
.................................................................................................AGGTAGTAGGTTGTATAGT.........................................................................................................................................191402.00402123657031140000
...............................................................................................TGAGGTAGTAGGTTGTATAGTAAA......................................................................................................................................241387.0038782460118392010000
...............................................................................................TGAGGTAGTAGGTTGTATAT..........................................................................................................................................201324.0032410370096145360000
...............................................................................................TGAGGTAGTAGGTTGTATAGTTT.......................................................................................................................................231283.0028331125001222930000
......................................................................................................................................CTATACAATGTGCTAGCTTTCT.................................................................................................221275.00275722220917160020
...............................................................................................TGAGGTAGTAGGTTGTATAGTAC.......................................................................................................................................231245.002451522300724390000
...............................................................................................TGAGGTAGTAGGTTGTATAGTC........................................................................................................................................221232.002328738003348260000
..................................................................................................GGTAGTAGGTTGTATAGT.........................................................................................................................................181207.0020711183600250000
...............................................................................................TGAGGTAGTAGGTTGTATTT..........................................................................................................................................201159.001592354001429390000
...............................................................................................TGAGGTAGTAGGTTGTATAGTG........................................................................................................................................221134.001342471001217100000
................................................................................................GAGGTAGTAGGTTGTATAGTT........................................................................................................................................211121.001210118000120000
........................................................................................................................................ATACAATGTGCTAGCTTTCT.................................................................................................201120.001200119100000000
..........................................................................................................................................ACAATGTGCTAGCTTTCT.................................................................................................18186.0086086000000000
.................................................................................................AGGTAGTAGGTTGTATAG..........................................................................................................................................18178.0078371001030000
..............................................................................................TTGAGGTAGTAGGTTGTATAGT.........................................................................................................................................22175.0075074000100000
...............................................................................................TGAGGTAGTAGGTTGTATAC..........................................................................................................................................20171.007135200519100000
................................................................................................GAGGTAGTAGGTTGTATA...........................................................................................................................................18168.0068165000010001
................................................................................................GAGGTAGTAGGTTGTATAGTAA.......................................................................................................................................22166.0066066000000000
...............................................................................................TGAGGTAGTAGGTTGTATAGTAG.......................................................................................................................................23161.006112900511150000
.................................................................................................AGGTAGTAGGTTGTATAGTA........................................................................................................................................20160.0060351000150000
.........................................................................................................................................TACAATGTGCTAGCTTTCT.................................................................................................19159.0059058100000000
...............................................................................................TGAGGTAGTAGGTTGTAC............................................................................................................................................18150.0050442001300000
...............................................................................................TGAGGTAGTAGGTTGTATAAA.........................................................................................................................................21148.00481660023210000
...............................................................................................TGAGGTAGTAGGTTGTATC...........................................................................................................................................19144.0044371000330000
...............................................................................................TGAGGTAGTAGGTTGTATG...........................................................................................................................................19142.0042830013000027
.......................................................................................................................................TATACAATGTGCTAGCTTTCT.................................................................................................21134.0034133000000000
...............................................................................................TGAGGTAGTAGGTTGTA.............................................................................................................................................17134.0034000003400000
..............................................................................................TTGAGGTAGTAGGTTGTATAG..........................................................................................................................................21128.0028028000000000
...............................................................................................TGAGGTAGTAGGTTGTATAGTTA.......................................................................................................................................23128.002898000470000
......................................................................................................................................CTATACAATGTGCTAGCTTTC..................................................................................................21127.0027117001620000
...............................................................................................TGAGGTAGTAGGTTGTATTA..........................................................................................................................................20122.002284001360000
..............................................................................................TTGAGGTAGTAGGTTGTATAGTA........................................................................................................................................23121.0021021000000000
................................................................................................GAGGTAGTAGGTTGTATAGTAT.......................................................................................................................................22120.0020020000000000
...............................................................................................TGAGGTAGTAGGTTGTAA............................................................................................................................................18120.0020040051100000
................................................................................................GAGGTAGTAGGTTGTATAGA.........................................................................................................................................20120.0020019000100000
................................................................................................GAGGTAGTAGGTTGTATT...........................................................................................................................................18118.0018018000000000
...............................................................................................TGAGGTAGTAGGTTGTAG............................................................................................................................................18112.001251003120000
................................................................................................GAGGTAGTAGGTTGTATAGTTT.......................................................................................................................................22110.0010010000000000
...............................................................................................TGAGGTAGTAGGTTGTATAGTCA.......................................................................................................................................23110.001001000270000
droEre2
AAGAAATCCAGAAGATCCTTTAAAAACCAAA----CCACCTA---------GCAAAAAGGACTA-CACC-AAGGACCTTTTTCTCTCTGGCAAATTGAGGTAGTAGGTTGTATAGTAGTAATTACA-CATCATACTATACAATGTGCTAGCTTTCTTTGCTTGACTACAAGCCGCATTTGA-TTAAAGAA----------T---CC-------------------CA-ATCGAACTG----------CA---CSizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
...............................................................................................TGAGGTAGTAGGTTGTATAGT.........................................................................................................................................211631309.00631309995047330766234209264178329
...............................................................................................TGAGGTAGTAGGTTGTATAG..........................................................................................................................................201206387.002063874140001161147382278597953
...............................................................................................TGAGGTAGTAGGTTGTATAGTA........................................................................................................................................221136725.0013672522606251207597774918825
...............................................................................................TGAGGTAGTAGGTTGTATAGTAA.......................................................................................................................................23123925.002392512900550011318107652
...............................................................................................TGAGGTAGTAGGTTGTATA...........................................................................................................................................19114106.001410613840488152476746240
...............................................................................................TGAGGTAGTAGGTTGTATAGTT........................................................................................................................................22113808.00138084046172805335367721
................................................................................................GAGGTAGTAGGTTGTATAGT.........................................................................................................................................2016043.006043546883002502870
...............................................................................................TGAGGTAGTAGGTTGTATAGA.........................................................................................................................................2115697.00569754402311226726531
...............................................................................................TGAGGTAGTAGGTTGTAT............................................................................................................................................1815479.0054798100358011702853288
...............................................................................................TGAGGTAGTAGGTTGTATAGTAT.......................................................................................................................................2313846.00384639901270196113590
...............................................................................................TGAGGTAGTAGGTTGTATAA..........................................................................................................................................2012794.0027941350110094316060
................................................................................................GAGGTAGTAGGTTGTATAG..........................................................................................................................................1912184.0021842016012079743
...............................................................................................TGAGGTAGTAGGTTGTATAGTAAA......................................................................................................................................2412015.0020159603508969880
...............................................................................................TGAGGTAGTAGGTTGTATT...........................................................................................................................................1911661.00166131205406956000
...............................................................................................TGAGGTAGTAGGTTGTATAGG.........................................................................................................................................2111553.0015531418038042550
................................................................................................GAGGTAGTAGGTTGTATAGTA........................................................................................................................................2111489.001489132309095620
...............................................................................................TGAGGTAGTAGGTTGTATAT..........................................................................................................................................2011175.001175132017102646080
......................................................................................................................................CTATACAATGTGCTAGCTTTCT.................................................................................................221913.009132320270496050
...............................................................................................TGAGGTAGTAGGTTGTATAGTTT.......................................................................................................................................231846.0084624803303532111
...............................................................................................TGAGGTAGTAGGTTGTATAGC.........................................................................................................................................211816.008164808502214620
...............................................................................................TGAGGTAGTAGGTTGTATAGTAC.......................................................................................................................................231488.004883101401512920
...............................................................................................TGAGGTAGTAGGTTGTATG...........................................................................................................................................191441.004416030721404
...............................................................................................TGAGGTAGTAGGTTGTATAGTG........................................................................................................................................221384.00384520190992140
...............................................................................................TGAGGTAGTAGGTTGTATAGTAG.......................................................................................................................................231346.00346330140962030
.................................................................................................AGGTAGTAGGTTGTATAGT.........................................................................................................................................191337.0033725324029490
...............................................................................................TGAGGTAGTAGGTTGTATAGTC........................................................................................................................................221276.00276370450911030
................................................................................................GAGGTAGTAGGTTGTATAGTT........................................................................................................................................211213.00213199020660
...............................................................................................TGAGGTAGTAGGTTGTATAAA.........................................................................................................................................211207.002078030751210
...............................................................................................TGAGGTAGTAGGTTGTATTT..........................................................................................................................................202160.0032093080161580
...............................................................................................TGAGGTAGTAGGTTGTATAC..........................................................................................................................................201146.0014617015045690
...............................................................................................TGAGGTAGTAGGTTGTATAGTTA.......................................................................................................................................231141.0014123011058490
......................................................................................................................................CTATACAATGTGCTAGCTTTC..................................................................................................211130.00130430506760
..................................................................................................GGTAGTAGGTTGTATAGT.........................................................................................................................................181119.001193031045400
.................................................................................................AGGTAGTAGGTTGTATAG..........................................................................................................................................181117.00117950205150
...............................................................................................TGAGGTAGTAGGTTGTAGT...........................................................................................................................................192114.002286010125960
................................................................................................GAGGTAGTAGGTTGTATAGTAA.......................................................................................................................................221107.001077002017180
...............................................................................................TGAGGTAGTAGGTTGTAA............................................................................................................................................18189.0089801022535
.................................................................................................AGGTAGTAGGTTGTATAGTA........................................................................................................................................20187.008769020880
..............................................................................................TTGAGGTAGTAGGTTGTATAGT.........................................................................................................................................22185.008581000220
................................................................................................GAGGTAGTAGGTTGTATA...........................................................................................................................................18170.007060010450
...............................................................................................TGAGGTAGTAGGTTGTATATA.........................................................................................................................................21168.006813011012320
...............................................................................................TGAGGTAGTAGGTTGTATTA..........................................................................................................................................20164.00641201019320
................................................................................................GAGGTAGTAGGTTGTATAGA.........................................................................................................................................20153.005343000550
...............................................................................................TGAGGTAGTAGGTTGTATAGTTAA......................................................................................................................................24152.0052300022270
...............................................................................................TGAGGTAGTAGGTTGTATAGGT........................................................................................................................................22151.005148020010
...............................................................................................TGAGGTAGTAGGTTGT..............................................................................................................................................16148.004800000048
..................................................................................................GGTAGTAGGTTGTATAGTA........................................................................................................................................19136.003690001890
...............................................................................................TGAGGTAGTAGGTTGTATAGTATA......................................................................................................................................24135.0035100012220
.................................................................................................AGGTAGTAGGTTGTATG...........................................................................................................................................17131.003100000031
................................................................................................GAGGTAGTAGGTTGTATAGTAT.......................................................................................................................................22130.003021010530
..............................................................................................TTGAGGTAGTAGGTTGTATAG..........................................................................................................................................21130.003028000110

Generated: 10/20/2015 at 10:18 PM