ID:

dgr-bantam

 Coordinate:

scaffold_15110:13265221-13265301 -

 Confidence:

Known

 Class:

Unknown

 Genomic Locale:

5pUTR

 [View on miRBase]

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-27.1 -27.1 -27.1

Flybase annnotation

pre_miRNA [Dgri\bantam-RM]; utr5 [utr5_plus_6230]; miRNA [Dgri\bantam-RA]

No Repeatable elements found

Sense Strand Reads

TCTCTCTCTCTCTAAGTGTGTGCGTCTCTCTGTCTCCATCACTACCTATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTTTTCAGACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATACCACATTCCACATTCCAATGGTGTTTTTTTTTGTGTGTGCCCTG

*************************************************.........((((((.((((((((((..((((((.(((((((...)))).))).))))))..)))))))))).))))))..........******************************************* 		Read size # Mismatch Hit Count Total Norm Total V109

male body		 M041

female body
.....................................................................................................TGAGATCATTTTGAAAGCTGAT.......................................................... 22 0 1 269880.00 269880 205761 64119
.....................................................................................................TGAGATCATTTTGAAAGCTGATT......................................................... 23 0 1 228352.00 228352 110738 117614
.....................................................................................................TGAGATCATTTTGAAAGCTGATTT........................................................ 24 0 1 10552.00 10552 3601 6951
.....................................................................................................TGAGATCATTTTGAAAGCTGA........................................................... 21 0 1 9154.00 9154 4326 4828
......................................................................................................GAGATCATTTTGAAAGCTGATT......................................................... 22 0 1 7269.00 7269 21 7248
......................................................................................................GAGATCATTTTGAAAGCTGAT.......................................................... 21 0 1 4076.00 4076 17 4059
.....................................................................................................TGAGATCATTTTGAAAGATGAT.......................................................... 22 1 1 2084.00 2084 2065 19
................................................................CCGGTTTTCGATTTGGTTTGACT.............................................................................................. 23 0 1 1823.00 1823 705 1118
.....................................................................................................TGAGATCATTTTGAAAGTTGAT.......................................................... 22 1 1 1423.00 1423 1414 9
.....................................................................................................TGAGATCATTTTGAAAGCTG............................................................ 20 0 1 1417.00 1417 695 722
.....................................................................................................TGAGATCATTTTGAAAGATGATT......................................................... 23 1 1 1208.00 1208 1181 27
.....................................................................................................TGAGATCATTTTGAAAGGTGAT.......................................................... 22 1 1 1197.00 1197 1195 2
.....................................................................................................TGAGATCATTTTGAAAGCTGATA......................................................... 23 1 1 1059.00 1059 779 280
.....................................................................................................TGAGATCATTTTGAAAGCTGATC......................................................... 23 1 1 943.00 943 886 57
.....................................................................................................TGAGATCATTTTGAAAGTTGATT......................................................... 23 1 1 817.00 817 805 12
.....................................................................................................TGAGATAATTTTGAAAGCTGAT.......................................................... 22 1 1 770.00 770 761 9
.....................................................................................................TGAGATCACTTTGAAAGCTGAT.......................................................... 22 1 1 741.00 741 737 4
.....................................................................................................TGAGATCATTTTGAAAGGTGATT......................................................... 23 1 1 703.00 703 696 7
.....................................................................................................TGCGATCATTTTGAAAGCTGAT.......................................................... 22 1 1 615.00 615 612 3
.....................................................................................................TGAGATCATTTTGAAAGCT............................................................. 19 0 1 561.00 561 164 397
.....................................................................................................TGAGATCATTTTGAAAGCTGATG......................................................... 23 1 1 559.00 559 486 73
.....................................................................................................TGAGACCATTTTGAAAGCTGAT.......................................................... 22 1 1 544.00 544 537 7
......................................................................................................GAGATCATTTTGAAAGCTGATTT........................................................ 23 0 1 458.00 458 1 457
.................................................................CGGTTTTCGATTTGGTTTGACT.............................................................................................. 22 0 1 440.00 440 162 278
.....................................................................................................TGAGATCAATTTGAAAGCTGAT.......................................................... 22 1 1 429.00 429 428 1
.....................................................................................................TGAGATCACTTTGAAAGCTGATT......................................................... 23 1 1 407.00 407 391 16
.....................................................................................................TGAGATTATTTTGAAAGCTGAT.......................................................... 22 1 1 399.00 399 384 15
.....................................................................................................TGGGATCATTTTGAAAGCTGAT.......................................................... 22 1 1 398.00 398 379 19
.....................................................................................................TGAGAACATTTTGAAAGCTGAT.......................................................... 22 1 1 397.00 397 395 2
.....................................................................................................TGAGATAATTTTGAAAGCTGATT......................................................... 23 1 1 380.00 380 369 11
.....................................................................................................TGAGATCATTTTGAAAGCTGATTA........................................................ 24 1 1 374.00 374 205 169
.....................................................................................................TGAGATCATTTTGAAAGC.............................................................. 18 0 1 361.00 361 6 355
.....................................................................................................TGCGATCATTTTGAAAGCTGATT......................................................... 23 1 1 354.00 354 353 1
.....................................................................................................TGTGATCATTTTGAAAGCTGAT.......................................................... 22 1 1 339.00 339 338 1
.....................................................................................................TGAGATCCTTTTGAAAGCTGAT.......................................................... 22 1 1 309.00 309 309 0
.....................................................................................................TGAGATCATTTTAAAAGCTGAT.......................................................... 22 1 1 269.00 269 213 56
.....................................................................................................TGAGACCATTTTGAAAGCTGATT......................................................... 23 1 1 265.00 265 257 8
.....................................................................................................TGAGATCAGTTTGAAAGCTGAT.......................................................... 22 1 1 261.00 261 261 0
.....................................................................................................TGAGATCATTTTGAAACCTGAT.......................................................... 22 1 1 258.00 258 198 60
......................................................................................................GAGATCATTTTGAAAGCTGA........................................................... 20 0 1 255.00 255 2 253
.....................................................................................................TGAGATCAATTTGAAAGCTGATT......................................................... 23 1 1 242.00 242 237 5
.....................................................................................................TGAGATCATTTTGAAAGCTGCT.......................................................... 22 1 1 238.00 238 237 1
.....................................................................................................TGAGATCATTTTGAAAGCTGAC.......................................................... 22 1 1 238.00 238 227 11
.....................................................................................................TGAGAGCATTTTGAAAGCTGAT.......................................................... 22 1 1 235.00 235 234 1
.....................................................................................................TGAGATCATTTTGAAACCTGATT......................................................... 23 1 1 235.00 235 109 126
.....................................................................................................TGAGCTCATTTTGAAAGCTGAT.......................................................... 22 1 1 234.00 234 233 1
.....................................................................................................TGAGATTATTTTGAAAGCTGATT......................................................... 23 1 1 233.00 233 206 27
.....................................................................................................TGAGATCATTTTGAAAGCCGAT.......................................................... 22 1 1 231.00 231 221 10
.....................................................................................................TGAGATCATTTTAAAAGCTGATT......................................................... 23 1 1 230.00 230 129 101
.....................................................................................................TGAGATCATTTTGAAAACTGATT......................................................... 23 1 1 222.00 222 47 175
.....................................................................................................TGGGATCATTTTGAAAGCTGATT......................................................... 23 1 1 216.00 216 183 33
.....................................................................................................TGAGATCATTTTGAAGGCTGAT.......................................................... 22 1 1 211.00 211 178 33
.....................................................................................................TGAGATCATTTTGAACGCTGAT.......................................................... 22 1 1 204.00 204 203 1
.....................................................................................................TGAGATCATTTTGAAATCTGATT......................................................... 23 1 1 202.00 202 71 131
.....................................................................................................TGAGATCATTTTGAAATCTGAT.......................................................... 22 1 1 197.00 197 128 69
.....................................................................................................TGAGAACATTTTGAAAGCTGATT......................................................... 23 1 1 195.00 195 193 2
....................................................................................................CTGAGATCATTTTGAAAGCTGATT......................................................... 24 1 1 193.00 193 13 180
.....................................................................................................TGAGATCATTTTGAAAGCTGATTG........................................................ 24 1 1 181.00 181 10 171
.....................................................................................................TGAGATCATTTCGAAAGCTGAT.......................................................... 22 1 1 180.00 180 169 11
.....................................................................................................TGAGGTCATTTTGAAAGCTGAT.......................................................... 22 1 1 178.00 178 154 24
....................................................................................................GTGAGATCATTTTGAAAGCTGAT.......................................................... 23 0 1 178.00 178 117 61
.....................................................................................................TGACATCATTTTGAAAGCTGAT.......................................................... 22 1 1 176.00 176 168 8
.....................................................................................................TGTGATCATTTTGAAAGCTGATT......................................................... 23 1 1 174.00 174 171 3
.....................................................................................................TGATATCATTTTGAAAGCTGAT.......................................................... 22 1 1 172.00 172 143 29
.....................................................................................................TGAGATCATTTTGAAAGCTGCTT......................................................... 23 1 1 170.00 170 169 1
.....................................................................................................TGAGATGATTTTGAAAGCTGAT.......................................................... 22 1 1 170.00 170 168 2
.....................................................................................................CGAGATCATTTTGAAAGCTGAT.......................................................... 22 1 1 167.00 167 153 14
.....................................................................................................TGAGATCATTTTGAAAGCTCAT.......................................................... 22 1 1 165.00 165 159 6
.......................................................................................................AGATCATTTTGAAAGCTGATT......................................................... 21 0 1 164.00 164 0 164
.....................................................................................................TGAGATCATTTTGAAAACTGAT.......................................................... 22 1 1 164.00 164 78 86
.....................................................................................................TGAGATCATCTTGAAAGCTGAT.......................................................... 22 1 1 164.00 164 158 6
.....................................................................................................TGAGATCCTTTTGAAAGCTGATT......................................................... 23 1 1 163.00 163 160 3
.....................................................................................................TGAGATCATTTTGAAAGCTGAA.......................................................... 22 1 1 155.00 155 100 55
.....................................................................................................TCAGATCATTTTGAAAGCTGAT.......................................................... 22 1 1 155.00 155 149 6
.....................................................................................................TGAGATCATTTTGAAGGCTGATT......................................................... 23 1 1 149.00 149 109 40
.....................................................................................................TTAGATCATTTTGAAAGCTGAT.......................................................... 22 1 1 149.00 149 117 32
.....................................................................................................TGATATCATTTTGAAAGCTGATT......................................................... 23 1 1 147.00 147 88 59
................................................................CCGGTTTTCGATTTGGTTTGAC............................................................................................... 22 0 1 145.00 145 38 107
.....................................................................................................TGAGATCATTTTCAAAGCTGAT.......................................................... 22 1 1 144.00 144 133 11
.....................................................................................................TGAGAGCATTTTGAAAGCTGATT......................................................... 23 1 1 142.00 142 141 1
.....................................................................................................TGAGATCATTTTGACAGCTGAT.......................................................... 22 1 1 135.00 135 135 0
.....................................................................................................TGAGATCATTTTGAACGCTGATT......................................................... 23 1 1 132.00 132 129 3
.....................................................................................................TGAGATCATTTTGCAAGCTGAT.......................................................... 22 1 1 125.00 125 125 0
.....................................................................................................TGAGCTCATTTTGAAAGCTGATT......................................................... 23 1 1 123.00 123 120 3
....................................................................................................CTGAGATCATTTTGAAAGCTGAT.......................................................... 23 1 1 123.00 123 10 113
.....................................................................................................TGAGATCATTTTGAAAGCCGATT......................................................... 23 1 1 120.00 120 101 19
.....................................................................................................TGAGATCATTCTGAAAGCTGAT.......................................................... 22 1 1 119.00 119 115 4
.....................................................................................................TGACATCATTTTGAAAGCTGATT......................................................... 23 1 1 116.00 116 101 15
.....................................................................................................TGAGATCAGTTTGAAAGCTGATT......................................................... 23 1 1 114.00 114 114 0
.....................................................................................................TGAGATCATTTTGGAAGCTGAT.......................................................... 22 1 1 114.00 114 100 14
....................................................................................................TTGAGATCATTTTGAAAGCTGATT......................................................... 24 1 1 113.00 113 0 113
.....................................................................................................TGAGGTCATTTTGAAAGCTGATT......................................................... 23 1 1 113.00 113 72 41
.....................................................................................................TTAGATCATTTTGAAAGCTGATT......................................................... 23 1 1 111.00 111 51 60
.....................................................................................................CGAGATCATTTTGAAAGCTGATT......................................................... 23 1 1 111.00 111 78 33
.....................................................................................................TGAGATGATTTTGAAAGCTGATT......................................................... 23 1 1 107.00 107 102 5
.....................................................................................................TGAGATCATTTCGAAAGCTGATT......................................................... 23 1 1 103.00 103 88 15
.......................................................................................................AGATCATTTTGAAAGCTGAT.......................................................... 20 0 1 101.00 101 7 94
.....................................................................................................TGAAATCATTTTGAAAGCTGAT.......................................................... 22 1 1 100.00 100 94 6
....................................................................................................ATGAGATCATTTTGAAAGCTGATT......................................................... 24 1 1 99.00 99 0 99
.....................................................................................................TGAGATCATTTTGAAAGCTGGT.......................................................... 22 1 1 99.00 99 90 9
.....................................................................................................TGAGATCATTTTGAAAGCTTATT......................................................... 23 1 1 97.00 97 73 24
.....................................................................................................TGAGATCATTTTCAAAGCTGATT......................................................... 23 1 1 95.00 95 77 18
.....................................................................................................TGAGATCATTTTGAAAGCTGACT......................................................... 23 1 1 94.00 94 87 7
.....................................................................................................TCAGATCATTTTGAAAGCTGATT......................................................... 23 1 1 94.00 94 78 16
.....................................................................................................TGAGATCATTTTGAAAGCTGATTC........................................................ 24 1 1 93.00 93 17 76
....................................................................................................GTGAGATCATTTTGAAAGCTGATT......................................................... 24 0 1 93.00 93 18 75
.....................................................................................................TGAGATCATCTTGAAAGCTGATT......................................................... 23 1 1 85.00 85 82 3
.....................................................................................................TGAGATCATTTTGCAAGCTGATT......................................................... 23 1 1 83.00 83 80 3
.....................................................................................................TGAGATCGTTTTGAAAGCTGAT.......................................................... 22 1 1 81.00 81 77 4
.....................................................................................................TGAGATCATTTTGAAAGCTATT.......................................................... 22 2 1 80.00 80 77 3
.....................................................................................................TGAGATCATTTTGAAAGCTAAT.......................................................... 22 1 1 79.00 79 72 7
.....................................................................................................TAAGATCATTTTGAAAGCTGAT.......................................................... 22 1 1 77.00 77 68 9
....................................................................................................TTGAGATCATTTTGAAAGCTGAT.......................................................... 23 1 1 70.00 70 0 70
.....................................................................................................TGAGATCATTTTGAAAGCTCATT......................................................... 23 1 1 70.00 70 62 8
.....................................................................................................TGAGATCATTTTGAAAGCTTAT.......................................................... 22 1 1 69.00 69 60 9
.....................................................................................................TGAGATCATTTTGAAAGCTGGTT......................................................... 23 1 1 69.00 69 50 19
.....................................................................................................TGAGATCATTCTGAAAGCTGATT......................................................... 23 1 1 68.00 68 64 4
.....................................................................................................TGAGATCATTTTGGAAGCTGATT......................................................... 23 1 1 67.00 67 54 13
.....................................................................................................TGAAATCATTTTGAAAGCTGATT......................................................... 23 1 1 67.00 67 51 16
....................................................................................................ATGAGATCATTTTGAAAGCTGAT.......................................................... 23 1 1 65.00 65 1 64
.....................................................................................................TGAGATCATTTTGACAGCTGATT......................................................... 23 1 1 65.00 65 64 1
.....................................................................................................TGAGATCATTTTTAAAGCTGAT.......................................................... 22 1 1 65.00 65 56 9
.....................................................................................................TGAGATCATTTTGAGAGCTGAT.......................................................... 22 1 1 64.00 64 59 5
.....................................................................................................TGAGATCATTTTGAAAGCTAATT......................................................... 23 1 1 62.00 62 51 11
.....................................................................................................TGAGATCATTTTTAAAGCTGATT......................................................... 23 1 1 59.00 59 37 22
.....................................................................................................TAAGATCATTTTGAAAGCTGATT......................................................... 23 1 1 52.00 52 41 11
.....................................................................................................TGAGATCATTTTGAGAGCTGATT......................................................... 23 1 1 51.00 51 42 9
.....................................................................................................TGAGATCATTTTGAAAGCTGATTTT....................................................... 25 0 1 51.00 51 15 36
.....................................................................................................TGAGTTCATTTTGAAAGCTGAT.......................................................... 22 1 1 46.00 46 44 2
........................................................................................................GATCATTTTGAAAGCTGATT......................................................... 20 0 1 44.00 44 0 44
.....................................................................................................TGAGATCGTTTTGAAAGCTGATT......................................................... 23 1 1 44.00 44 35 9
.........................................................................................................ATCATTTTGAAAGCTGAT.......................................................... 18 0 1 43.00 43 26 17
.........................................................................................................ATCATTTTGAAAGCTGATT......................................................... 19 0 1 43.00 43 5 38
................................................................CCGGTTTTCGATTTGGTTTGA................................................................................................ 21 0 1 43.00 43 8 35
......................................................................................................GAGATCATTTTGAAAGCTG............................................................ 19 0 1 42.00 42 0 42
.....................................................................................................TGAGATCATTTTGAAAGCTGATTGG....................................................... 25 2 1 36.00 36 0 36
.....................................................................................................TGAGATCATTTTGAAAGCTGATCT........................................................ 24 1 1 36.00 36 32 4
.....................................................................................................TGAGATCATTTTGAAAGATGA........................................................... 21 1 1 36.00 36 35 1
.....................................................................................................TGAGATCATTTTGAAAGATGATTT........................................................ 24 1 1 34.00 34 34 0
.....................................................................................................GGAGATCATTTTGAAAGCTGATT......................................................... 23 1 1 34.00 34 10 24
.....................................................................................................TGAGATCATTTTGAAAGCTGTTT......................................................... 23 1 1 33.00 33 27 6
.....................................................................................................AGAGATCATTTTGAAAGCTGAT.......................................................... 22 1 1 31.00 31 15 16
.....................................................................................................TGAGTTCATTTTGAAAGCTGATT......................................................... 23 1 1 31.00 31 28 3
..........................................................................................................TCATTTTGAAAGCTGATT......................................................... 18 0 1 31.00 31 2 29
........................................................................................................GATCATTTTGAAAGCTGAT.......................................................... 19 0 1 30.00 30 0 30
.....................................................................................................TGAGATCATTTTGAAAGCTGATAT........................................................ 24 1 1 29.00 29 23 6
.....................................................................................................TGAGATCATTTTGTAAGCTGAT.......................................................... 22 1 1 28.00 28 22 6
.....................................................................................................TGAGATCATTTTGAAAGTTGA........................................................... 21 1 1 28.00 28 28 0
.....................................................................................................TGAGATCATTTTGAAAGGTGATTT........................................................ 24 1 1 27.00 27 27 0
................................................................CCGGTTTTCGATTTGGTTTGACTT............................................................................................. 24 1 1 27.00 27 13 14
.....................................................................................................GGAGATCATTTTGAAAGCTGAT.......................................................... 22 1 1 27.00 27 14 13
.....................................................................................................AGAGATCATTTTGAAAGCTGATT......................................................... 23 1 1 27.00 27 7 20
..................................................................GGTTTTCGATTTGGTTTGACT.............................................................................................. 21 0 1 26.00 26 0 26
.....................................................................................................TGAGATCATTTTGAAAGCTGTT.......................................................... 22 1 1 25.00 25 23 2
.....................................................................................................TGAGATCATTTTGAAAGGTGA........................................................... 21 1 1 22.00 22 22 0
.....................................................................................................TGAGATCTTTTTGAAAGCTGAT.......................................................... 22 1 1 22.00 22 18 4
.....................................................................................................TGAGATCATTTTGAAAGCTGAAT......................................................... 23 1 1 22.00 22 13 9
.....................................................................................................TGAGATCATTTTGAAAGTTGATTT........................................................ 24 1 1 21.00 21 21 0
.....................................................................................................TGAGATCATATTGAAAGCTGAT.......................................................... 22 1 1 21.00 21 20 1
.....................................................................................................TGAGATCATTTTGAAAGCTGATTTG....................................................... 25 1 1 21.00 21 0 21
.....................................................................................................TGAGATCACTTTGAAAGCTGATTT........................................................ 24 1 1 20.00 20 18 2
.......................................................................................................TGATCATTTTGAAAGCTGAT.......................................................... 20 1 1 19.00 19 18 1
.....................................................................................................TGAGATCATTTTGAAAGCTGATTTC....................................................... 25 1 1 19.00 19 0 19
.....................................................................................................TGAGATCATTTTGATAGCTGATT......................................................... 23 1 1 18.00 18 11 7
.....................................................................................................TGAGATCACTTTGAAAGCTGA........................................................... 21 1 1 18.00 18 18 0
.....................................................................................................TGAGATAATTTTGAAAGCTGA........................................................... 21 1 1 18.00 18 18 0
.....................................................................................................TGCGATCATTTTGAAACCTGAT.......................................................... 22 2 1 18.00 18 18 0
......................................................................................................GAGATCATTTTGAAAGCTGATA......................................................... 22 1 1 17.00 17 0 17
.....................................................................................................TGAGATCATATTGAAAGCTGATT......................................................... 23 1 1 16.00 16 11 5
.....................................................................................................TGGGATCATTTTGAAAGCTGATTT........................................................ 24 1 1 16.00 16 11 5
.................................................................CGGTTTTCGATTTGGTTTGAC............................................................................................... 21 0 1 16.00 16 3 13
.....................................................................................................TGAGATCATTTTGAATGCTGATT......................................................... 23 1 1 15.00 15 15 0
....................................................................................................CTGAGATCATTTTGAAAGCTGATTT........................................................ 25 1 1 15.00 15 1 14
.....................................................................................................TGAGATCATTTTGAAAGCTGATTTA....................................................... 25 1 1 15.00 15 3 12
.......................................................................................................TGATCATTTTGAAAGCTGATT......................................................... 21 1 1 14.00 14 13 1
.....................................................................................................TGAGATCTTTTTGAAAGCTGATT......................................................... 23 1 1 14.00 14 10 4
......................................................................................................TAGATCATTTTGAAAGCTGAT.......................................................... 21 1 1 14.00 14 13 1
.....................................................................................................TGAGATCATTATGAAAGCTGATT......................................................... 23 1 1 14.00 14 10 4
................................................................CCGGTTTTCGATTTGGTTTG................................................................................................. 20 0 1 13.00 13 2 11
.....................................................................................................TGAGATCATTTTGAAAGCTGATGT........................................................ 24 1 1 13.00 13 13 0
.....................................................................................................TGCGATCATTTTGAAAGCTGA........................................................... 21 1 1 13.00 13 13 0
.....................................................................................................TGCGATCATTTTGAACGCTGAT.......................................................... 22 2 1 13.00 13 13 0
.....................................................................................................TGAGATCATTTAGAAAGCTGAT.......................................................... 22 1 1 13.00 13 12 1
....................................................................................................TTGAGATCATTTTGAAAGCTGATTT........................................................ 25 1 1 13.00 13 0 13
.....................................................................................................TGAGATCATTATGAAAGCTGAT.......................................................... 22 1 1 13.00 13 12 1
.....................................................................................................TGGGATCATTTTGAAAGCTGA........................................................... 21 1 1 12.00 12 12 0
.....................................................................................................TGAGATCATTTTGAAATCTGATTT........................................................ 24 1 1 12.00 12 3 9
......................................................................................................GAGATCATTTTGAAAGCT............................................................. 18 0 1 12.00 12 0 12
.....................................................................................................TGAGATTATTTTGAAAGCTGATTT........................................................ 24 1 1 12.00 12 11 1
.......................................................................................................AGATCATTTTGAAAGCTGA........................................................... 19 0 1 12.00 12 0 12
.....................................................................................................TGAGATCATTTAGAAAGCTGATT......................................................... 23 1 1 12.00 12 10 2
.....................................................................................................TGAGATCATTTTGAAAGCTGATCA........................................................ 24 2 1 12.00 12 2 10
.....................................................................................................TGAGAACATTTTGAAAGCTGA........................................................... 21 1 1 12.00 12 12 0
.....................................................................................................TGAGATCATTTTGAAAGCGGATT......................................................... 23 1 1 11.00 11 5 6
.....................................................................................................TGAGATCAATTTGAAAGCTGA........................................................... 21 1 1 11.00 11 11 0
.....................................................................................................TGAGATCATTTTGAAAGCTGATAA........................................................ 24 2 1 11.00 11 5 6
.....................................................................................................TGAGATCATTTGGAAAGCTGAT.......................................................... 22 1 1 11.00 11 10 1
.....................................................................................................TGAGATAATTTTGAAAGCTGATTT........................................................ 24 1 1 11.00 11 11 0
.....................................................................................................TGAGATCATTTTAAAAGCTGA........................................................... 21 1 1 11.00 11 7 4
.....................................................................................................TGCGATCATTTTGAAAGCTGATTT........................................................ 24 1 1 11.00 11 11 0
.....................................................................................................TGAGATCATTTTAAAAGCTGATTT........................................................ 24 1 1 11.00 11 3 8
...................................................................................................ATTGAGATCATTTTGAAAGCTGATT......................................................... 25 1 1 10.00 10 0 10
.....................................................................................................TGAGACCATTTTGAAAGCTGATTT........................................................ 24 1 1 10.00 10 10 0
......................................................................................................GAGATCATTTTAAAAGCTGATT......................................................... 22 1 1 10.00 10 0 10
......................................................................................................GAGATCATTTTGAAAGCTGATTA........................................................ 23 1 1 10.00 10 0 10
.....................................................................................................TGAGATCATTTTGAAAGCTGATGG........................................................ 24 2 1 10.00 10 0 10
.....................................................................................................TGAGATCATTTTGATAGCTGAT.......................................................... 22 1 1 10.00 10 10 0
.....................................................................................................TGAGATTATTTTGAAAGCTGA........................................................... 21 1 1 10.00 10 8 2
.....................................................................................................TGAGATCATTTTGAAAGCTGAG.......................................................... 22 1 1 10.00 10 6 4
.....................................................................................................TGAGATCATTTTGAAAGCTGATTTTT...................................................... 26 1 1 10.00 10 4 6
.....................................................................................................TGAGATCATTTTGTAAGCTGATT......................................................... 23 1 1 10.00 10 7 3
....................................................................................................CTGAGATCATTTTGAAAGCTGA........................................................... 22 1 1 10.00 10 3 7
.....................................................................................................TGAGATCATTTTGAATGCTGAT.......................................................... 22 1 1 10.00 10 9 1
.....................................................................................................TGGGATCATTTTGAAACCTGAT.......................................................... 22 2 1 9.00 9 9 0
......................................................................................................TAGATCATTTTGAAAGCTGATT......................................................... 22 1 1 9.00 9 3 6
.....................................................................................................TGAGATCCTTTTGAAAGCTGA........................................................... 21 1 1 9.00 9 9 0
.....................................................................................................TGAGATCATTTTGAAAGCAGATT......................................................... 23 1 1 9.00 9 9 0
.....................................................................................................TGACATCATTTTGAAAGCTGATTT........................................................ 24 1 1 9.00 9 5 4
.....................................................................................................TGAGATCATTTTGAAACCTGATTT........................................................ 24 1 1 9.00 9 4 5
.......................................................................................................AGATCATTTTGAAAGCTGATTT........................................................ 22 0 1 9.00 9 0 9
....................................................................................................GTGAGATCATTTTGAAAGCTGA........................................................... 22 0 1 9.00 9 5 4
.....................................................................................................TGAGCTCATTTTGAAAGCTGATTT........................................................ 24 1 1 9.00 9 8 1
......................................................................................................GAGATCATTTTGAAACCTGATT......................................................... 22 1 1 8.00 8 0 8
................................................................CCGGTTTTCGATTTGGTTTGACG.............................................................................................. 23 1 1 8.00 8 8 0
.....................................................................................................TGTGATCATTTTGAACGCTGAT.......................................................... 22 2 1 8.00 8 8 0
......................................................................................................GAGATCATTTTGAAAACTGAT.......................................................... 21 1 1 8.00 8 0 8
................................................................CCGGTTTTCGATTTGGTTTGACC.............................................................................................. 23 1 1 8.00 8 7 1
.....................................................................................................TGAGATCATTTTGAAAGCTCA........................................................... 21 1 1 7.00 7 6 1
.....................................................................................................TGAGATCATTTTGAAAGCAGAT.......................................................... 22 1 1 7.00 7 7 0
.....................................................................................................TGAGATCATTTTGCAAGCTGA........................................................... 21 1 1 7.00 7 7 0
.....................................................................................................TGTGATCATTTTGAAAGCTGA........................................................... 21 1 1 7.00 7 6 1
................................................................CCGGTTTTCGATTTGGTT................................................................................................... 18 0 1 7.00 7 0 7
.....................................................................................................TGAGATCATTTTGAAAGCTGAAA......................................................... 23 2 1 7.00 7 5 2
.....................................................................................................TGTGATCATTTTGAAACCTGAT.......................................................... 22 2 1 7.00 7 7 0
.....................................................................................................TGAGATCATTTTGAAAGCTGATTGGC...................................................... 26 3 1 7.00 7 0 7
.....................................................................................................TGAGCTCATTTTGAAAGCTGA........................................................... 21 1 1 7.00 7 7 0
.....................................................................................................TGTGATCATTTTGAAACCTGATT......................................................... 23 2 1 7.00 7 7 0
.....................................................................................................TGAGATCATTTTGAAAGCTGATTCA....................................................... 25 2 1 7.00 7 0 7
.....................................................................................................TGCGATCATTTTGAAACCTGATT......................................................... 23 2 1 7.00 7 7 0
.....................................................................................................TGAGATCAATTTGAAAGCTGATTT........................................................ 24 1 1 7.00 7 6 1
................................................................CCGGTTTTCGATTTGGTATGACT.............................................................................................. 23 1 1 7.00 7 7 0
.....................................................................................................TGAGACCATTTTGAAAGCTGA........................................................... 21 1 1 7.00 7 7 0
.....................................................................................................TGTGATCATTTTGCAAGCTGAT.......................................................... 22 2 1 7.00 7 7 0
.....................................................................................................TGAGATCATTTTGAAAACTGATTT........................................................ 24 1 1 6.00 6 1 5
......................................................................................................GAGATCATTTTGAAATCTGAT.......................................................... 21 1 1 6.00 6 0 6
.....................................................................................................TGAGATCATTTTGAAAGCCGATTT........................................................ 24 1 1 6.00 6 6 0
...........................................................................................................CATTTTGAAAGCTGATTT........................................................ 18 0 1 6.00 6 0 6
.....................................................................................................TGAGATCATCTTGAAAGCTGA........................................................... 21 1 1 6.00 6 5 1
......................................................................................................GAGATCATTTTGAAAACTGATT......................................................... 22 1 1 6.00 6 0 6
....................................................................................................ATGAGATCATTTTGAAAGCTGA........................................................... 22 1 1 6.00 6 0 6
.....................................................................................................TGAGATCATTTTGAAAGCGGAT.......................................................... 22 1 1 6.00 6 4 2
.....................................................................................................TGAGATCATTTTGAAAGCTGATTCC....................................................... 25 2 1 6.00 6 2 4
.....................................................................................................TGCGATCATTTTGAACGCTGATT......................................................... 23 2 1 6.00 6 6 0
.....................................................................................................TGAGATCATGTTGAAAGCTGAT.......................................................... 22 1 1 6.00 6 6 0
.....................................................................................................TGAGATCATTTTGAAAGCTGT........................................................... 21 1 1 6.00 6 2 4
................................................................CCGGTTTTCGATTTGGTGTGACT.............................................................................................. 23 1 1 6.00 6 6 0
.....................................................................................................TGAGATCATTTTGAAAGCTGATTCG....................................................... 25 2 1 6.00 6 0 6
......................................................................................................GAGATCATTTTGAAACCTGAT.......................................................... 21 1 1 6.00 6 0 6
.....................................................................................................CGAGATCATTTTGAAAGCTGATTT........................................................ 24 1 1 6.00 6 5 1
......................................................................................................TGGATCATTTTGAAAGCTGAT.......................................................... 21 2 1 6.00 6 6 0
.....................................................................................................TGTGATCATTTTGAAAGCTGATTT........................................................ 24 1 1 6.00 6 6 0
.....................................................................................................TGAGATCATTTTGAAAGCTGG........................................................... 21 1 1 6.00 6 3 3
...................................................................................................ACTGAGATCATTTTGAAAGCTGAT.......................................................... 24 1 1 6.00 6 0 6
....................................................................................................ATGAGATCATTTTGAAAGCTGATTT........................................................ 25 1 1 6.00 6 0 6
......................................................................................................GAGATCATTTTAAAAGCTGAT.......................................................... 21 1 1 5.00 5 0 5
.....................................................................................................TGAGATCATTTTGAAAGCTGATGGC....................................................... 25 3 1 5.00 5 0 5
......................................................................................................GATATCATTTTGAAAGCTGATT......................................................... 22 1 1 5.00 5 0 5
.....................................................................................................TGAGATCATTTTGAAAACTGA........................................................... 21 1 1 5.00 5 1 4
.....................................................................................................TGATATCATTTTGAAAGCTGATTT........................................................ 24 1 1 5.00 5 3 2
.....................................................................................................TGAGATCATTTTGAAACCTGA........................................................... 21 1 1 5.00 5 5 0
.....................................................................................................TGCGATCATTTTGCAAGCTGAT.......................................................... 22 2 1 5.00 5 5 0
.....................................................................................................TGAGATCATTTTGAAAGCTGATTAA....................................................... 25 2 1 5.00 5 2 3
...................................................................................................GTTGAGATCATTTTGAAAGCTGAT.......................................................... 24 2 1 5.00 5 0 5
.....................................................................................................TGGGATCATTTTGAAACCTGATT......................................................... 23 2 1 5.00 5 5 0
.....................................................................................................TGAGATCATGTTGAAAGCTGATT......................................................... 23 1 1 5.00 5 2 3
......................................................................................................GAGATCATTTTGAAAGCTGATTG........................................................ 23 1 1 5.00 5 0 5
.....................................................................................................TGAGATCATTTTGAAAGATGAC.......................................................... 22 2 1 5.00 5 5 0
.....................................................................................................CGAGATCATTTTGAAAGCTGA........................................................... 21 1 1 5.00 5 5 0
.....................................................................................................TGAGATCATTTTGAAGGATGAT.......................................................... 22 2 1 5.00 5 5 0
.....................................................................................................TGAGATCATTTTGAAAGATG............................................................ 20 1 1 5.00 5 5 0
.....................................................................................................TGAGATCATTTTGAAAGCTGATTCT....................................................... 25 1 1 5.00 5 0 5
....................................................................................................GTGAGATCATTTTGAAAGCTGATTT........................................................ 25 0 1 5.00 5 0 5
.....................................................................................................TGAGAGCATTTTGAAAGCTGATTT........................................................ 24 1 1 5.00 5 5 0
......................................................................................................GAGATCATTTTGAAAGCTGATG......................................................... 22 1 1 5.00 5 0 5
.....................................................................................................TGAGATCAGTTTGAAAGCTGA........................................................... 21 1 1 5.00 5 5 0
.....................................................................................................TGAGATCATTTCGAAAGCTGA........................................................... 21 1 1 5.00 5 5 0
.....................................................................................................TGCGCTCATTTTGAAAGCTGAT.......................................................... 22 2 1 5.00 5 5 0
...............................................................ACCGGTTTTCGATTTGGTTTGACT.............................................................................................. 24 0 1 5.00 5 0 5
.....................................................................................................TGAGATCATTCTGAAAGCTGA........................................................... 21 1 1 5.00 5 5 0
......................................................................................................GAGATCATTTTGAAAGCTGATTC........................................................ 23 1 1 5.00 5 0 5
.....................................................................................................TGAGATCATTTTGAAATCTGA........................................................... 21 1 1 5.00 5 3 2
.....................................................................................................TGAGATCATTCTGAAAGATGAT.......................................................... 22 2 1 5.00 5 5 0
.....................................................................................................TGAGATCATTTTGAACGATGAT.......................................................... 22 2 1 5.00 5 5 0
.....................................................................................................TGAGATTATTTTGAAAGCTG............................................................ 20 1 1 5.00 5 5 0
.....................................................................................................TGGGATCATTTTGAACGCTGAT.......................................................... 22 2 1 5.00 5 5 0
.....................................................................................................TGAGATCATTTTGAAAGCTGACC......................................................... 23 2 1 4.00 4 4 0
.....................................................................................................TGAGATCATTTTGAAAGCTTT........................................................... 21 2 1 4.00 4 4 0
.....................................................................................................TGAGAACATTTTGAAAGCTGATTT........................................................ 24 1 1 4.00 4 4 0
.....................................................................................................CGAGATCATTTTGAAAGATGAT.......................................................... 22 2 1 4.00 4 4 0
.................................................................CGGTTTTCGATTTGGTTAGACT.............................................................................................. 22 1 1 4.00 4 4 0
.....................................................................................................TGAGATCATTTTGACAGATGAT.......................................................... 22 2 1 4.00 4 4 0

Anti-sense strand reads

AGAGAGAGAGAGATTCACACACGCAGAGAGACAGAGGTAGTGATGGATACTAAACTGATGCTTTGGCCAAAAGCTAAACCAAACTGACAAAAAGTCTGTTCACTCTAGTAAAACTTTCGACTAAAACAGTTACTTATGGTGTAAGGTGTAAGGTTACCACAAAAAAAAACACACACGGGAC

*******************************************.........((((((.((((((((((..((((((.(((((((...)))).))).))))))..)))))))))).))))))..........************************************************* 		Read size # Mismatch Hit Count Total Norm Total V109

male body
..................................AGGTAGTGATGGTCATTAA................................................................................................................................ 19 3 20 0.05 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droGri2 scaffold_15110:13265171-13265351 - dgr-bantam Known_mirbase TCTC----TCTCT-C--T---------------------------CT--AAGTG--------TGTGCGTCTCTCTGTCTCCATCA----C---------------------------T--ACC--T--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCAGACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGT-GTTTTTTTT------------------------TGT----------GTGTG----------CCCTG
droVir3 scaffold_13049:5805226-5805443 + dvi-bantam Known_mirbase TACTTCT----C-----GC-----TGCCCACCGTCTCCTACCCCTCGCAAGATGCCAACCCGCA--CCCCCCCCCCCCCCCCGCGCGCTCTTTGTGTGT-------CGT---------CTATC--T--CTGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTAT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGT------------------------------------TTTT-------GTGTG----------CCCTG
droMoj3 scaffold_6680:4143219-4143435 + dmo-bantam Known_mirbase TATCTCTGTCTCT-C--TCTAACGTGCTCACTGTCTC---------------------------TCCCTCTCTCTCTCTCTCTCTCTCTCTTTGTGTGTTGGTCGCCGT---------TTATCTCACTATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTTTTTTATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATAACCACA--------------------------------------TTCCACATCCCAATGGT------------------------------------TTTT-------GTGTG----------CCCTG
droWil2 scf2_1100000004511:10172072-10172271 + dwi-bantam Known_mirbase TCTT----CGTCTAC--C---------------------------CT--GA--------------------------------TG----ATTTGTTTTT-------TTTTCATACATTTTTTT--G--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACAGAAAAAAAAAGAAGAAAAAAAAATAACGATCATCATCTTGCCACATTCCGATGGCT--------------------------------------------------------------C-TG
dp5 XR_group8:4603845-4604018 - dps-bantam Known_mirbase ---------------------------------------------------ATG--------TTTGGGACTA-----CTCCACCA----A---------------------------T--A----T--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTTATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGTTGTTTTT-TTC------GTTTTTTT-TTT-----------TTTTTTTGTGTG----------CC-TA
droPer2 scaffold_29:844560-844735 - dpe-bantam Known_mirbase ---------------------------------------------CGAAAAATG--------TTTGGGACTA-----CTCCACCA----A---------------------------T--A----T--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTTATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCCATGGTTGTTTTT-TTC------GTTTTTTT---------TTTTTT-------GTGTG----------CC-TA
droAna3 scaffold_13337:6520534-6520682 - dan-bantam Known_mirbase ---------------------------------------------------------------------CT--------CC--------------------------------------------A--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTTATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGTATTTTTTT-TT-TTCTACGTTTTTG-----------GTTTT-----TTGTG-----------------
droBip1 scf7180000396709:254435-254602 - -------------------------------------------------AAACG--------TTTGTAACT--------CC--------------------------------------------A--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TT-ATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGTATTTTTTT-TTATTTTACTTTTTTTGGGGTTTTGGT-TTTT-------GT------------------
droKik1 scf7180000301816:100000-100163 - -------------------------------------------------AAACG--------TTTGTAACT--------CC-----------------------------------------------ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTAATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGTATTTTTTT-CTC---TTCGTTTTTTG-TGTGTTGTTGTTTG-------G-------------------
droFic1 scf7180000453052:608668-608825 - ---------------------------------------------CGAAAAACG--------TTTGTAACT--------TC--------------------------------------------A--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGCTGATTTTTGT------------------------TGTTTG-------GTGTG----------CC-TA
droEle1 scf7180000491249:790157-790310 + ---------------------------------------------CGAAAAACG--------TTTGTTACT--------TC--------------------------------------------A--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGTTGATTTTTGT------------------------TGTTTG-------GTTTG---------------
droRho1 scf7180000777258:18715-18863 + --------------------------------------------------------------TTTGTAACT--------TC--------------------------------------------A--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGTTGATTTTTGT------------------------TGTTTG-------GTTTG----------CC-TA
droBia1 scf7180000300910:717080-717231 + C--------------GCA---------------------------CGAAGATCG--------TTCGTAACT--------TC--------------------------------------------A--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCGACT-TTGT------------------------TGCTTG---------------------------
droTak1 scf7180000415846:33331-33488 - ---------------------------------------------CGAAAAACG--------TTTGTAACT--------TC--------------------------------------------A--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCGATTTTTGT------------------------TGTTTG-------GTGTG----------CC-TA
droEug1 scf7180000409184:669300-669470 + A-GC-----------GAA---------------------------TGAAAAACG--------CTTGTAACT--------TC--------------------------------------------A--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATG-CCACA--------------------------------------TTCCACATTCCAATGCTCGATTTTTGT------------------------TGTTTGGTGTTTGGTGTG----------CC-TA
dm3 chr3L:642190-642339 + dme-bantam Known_mirbase ---------------------------------------------------GCG--------TTTGTAACT--------CC--------------------------------------------A--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCGATTTTTGT------------------------TGTTTG-------GTGTG----------CC---
droSim2 3l:607015-607164 + dsi-bantam Known_mirbase ---------------------------------------------------GCG--------TTTGTAACT--------CC--------------------------------------------A--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCGATTTTTGT------------------------TGTTTG-------GTGTG----------CC---
droSec2 scaffold_2:662639-662788 + dse-bantam Known_mirbase ---------------------------------------------------GCG--------TTTGTAACT--------CC--------------------------------------------A--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCGATTTTTGT------------------------TGTTTG-------GTGTG----------CC---
droYak3 3L:629629-629809 + dya-bantam Known_mirbase A--------------------------------------------CGAAAAGCG--------TTTGTAACT--------CC--------------------------------------------A--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCGATTTT-GTT------GTTGTTGT-TGT-----TGCTCG-------CTGTGCTATACTGTGCTGTG
droEre2 scaffold_4784:648313-648473 + der-bantam Known_mirbase TAGC-----------GGA---------------------------CGAAAAGCG--------TTTGTAACT--------CC--------------------------------------------A--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCGATTTTTGT------------------------TGCTTG-------CTGTG---------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droGri2
TCTC----TCTCT-C--T---------------------------CT--AAGTG--------TGTGCGTCTCTCTGTCTCCATCA----C---------------------------T--ACC--T--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCAGACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGT-GTTTTTTTT------------------------TGT----------GTGTG----------CCCTGSizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT..............................................................................................................................................221269880.0026988064119205761
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT.............................................................................................................................................231228352.00228352117614110738
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT............................................................................................................................................24110552.001055269513601
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGA...............................................................................................................................................2119154.00915448284326
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATT.............................................................................................................................................2217269.007269724821
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGAT..............................................................................................................................................2114076.004076405917
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................2311823.0018231118705
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTG................................................................................................................................................2011417.001417722695
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA.............................................................................................................................................2311059.001059280779
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC.............................................................................................................................................231943.0094357886
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCT.................................................................................................................................................191561.00561397164
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG.............................................................................................................................................231559.0055973486
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT............................................................................................................................................231458.004584571
..................................................................................................................................................CGGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................221440.00440278162
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA............................................................................................................................................241374.00374169205
.......................................................................................................................................................................................TGAGATCATTTTGAAAGC..................................................................................................................................................181361.003613556
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGA...............................................................................................................................................201255.002552532
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC..............................................................................................................................................221238.0023811227
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG............................................................................................................................................241181.0018117110
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT..............................................................................................................................................231178.0017861117
.........................................................................................................................................................................................AGATCATTTTGAAAGCTGATT.............................................................................................................................................211164.001641640
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA..............................................................................................................................................221155.0015555100
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGAC....................................................................................................................................................................................221145.0014510738
.........................................................................................................................................................................................AGATCATTTTGAAAGCTGAT..............................................................................................................................................201101.00101947
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC............................................................................................................................................24193.00937617
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT.............................................................................................................................................24193.00937518
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT...........................................................................................................................................25151.00513615
..........................................................................................................................................................................................GATCATTTTGAAAGCTGATT.............................................................................................................................................20144.0044440
...........................................................................................................................................................................................ATCATTTTGAAAGCTGAT..............................................................................................................................................18143.00431726
...........................................................................................................................................................................................ATCATTTTGAAAGCTGATT.............................................................................................................................................19143.0043385
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGA.....................................................................................................................................................................................21143.0043358
........................................................................................................................................................................................GAGATCATTTTGAAAGCTG................................................................................................................................................19142.0042420
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTGG...........................................................................................................................................25136.0036360
............................................................................................................................................................................................TCATTTTGAAAGCTGATT.............................................................................................................................................18131.0031292
..........................................................................................................................................................................................GATCATTTTGAAAGCTGAT..............................................................................................................................................19130.0030300
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACTT..................................................................................................................................................................................24127.00271413
...................................................................................................................................................GGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................21126.0026260
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTG...........................................................................................................................................25121.0021210
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTC...........................................................................................................................................25119.0019190
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATA.............................................................................................................................................22117.0017170
..................................................................................................................................................CGGTTTTCGATTTGGTTTGAC....................................................................................................................................................................................21116.0016133
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTA...........................................................................................................................................25115.0015123
.................................................................................................................................................CCGGTTTTCGATTTGGTTTG......................................................................................................................................................................................20113.0013112
........................................................................................................................................................................................GAGATCATTTTGAAAGCT.................................................................................................................................................18112.0012120
.........................................................................................................................................................................................AGATCATTTTGAAAGCTGA...............................................................................................................................................19112.0012120
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATCA............................................................................................................................................24112.0012102
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA............................................................................................................................................24111.001165
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTA............................................................................................................................................23110.0010100
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATGG............................................................................................................................................24110.0010100
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG..............................................................................................................................................22110.001046
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTTT..........................................................................................................................................26110.001064
.........................................................................................................................................................................................AGATCATTTTGAAAGCTGATTT............................................................................................................................................2219.00990
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGA...............................................................................................................................................2219.00945
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACG...................................................................................................................................................................................2318.00808
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACC...................................................................................................................................................................................2318.00817
.................................................................................................................................................CCGGTTTTCGATTTGGTT........................................................................................................................................................................................1817.00770
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA.............................................................................................................................................2317.00725
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTGGC..........................................................................................................................................2617.00770
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTCA...........................................................................................................................................2517.00770
.............................................................................................................................................................................................CATTTTGAAAGCTGATTT............................................................................................................................................1816.00660
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTCC...........................................................................................................................................2516.00642
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGT...............................................................................................................................................2116.00642
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTCG...........................................................................................................................................2516.00660
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGG...............................................................................................................................................2116.00633
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATGGC...........................................................................................................................................2515.00550
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA...........................................................................................................................................2515.00532
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTG............................................................................................................................................2315.00550
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATTT............................................................................................................................................2515.00550
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATG.............................................................................................................................................2215.00550
................................................................................................................................................ACCGGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................2415.00550
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTC............................................................................................................................................2315.00550
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGACC.............................................................................................................................................2314.00404
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTTT...............................................................................................................................................2114.00404
droVir3
TACTTCT----C-----GC-----TGCCCACCGTCTCCTACCCCTCGCAAGATGCCAACCCGCA--CCCCCCCCCCCCCCCCGCGCGCTCTTTGTGTGT-------CGT---------CTATC--T--CTGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTAT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGT------------------------------------TTTT-------GTGTG----------CCCTGSizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT.............................................................................................................................................2314431095.00443109517206617283663514034595135385443134223105652189043870803612663957650913332665500287439925371471515063581077277115216748113460131617762686028572460619272061362498170084719814807253841139513359625986909483921051786935736177714451613313329445653549836585207410629322301137395011823480113938229185370207701318817527145381092223956423400014301815802521073721542976291826196564738105
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT..............................................................................................................................................2212762232.002762232143455793215006072981149846488562088137982179917155554127900551217478294913948121850119593241824872143201468126263361772512399427557186051676027758219808290236904057181865457468033344200129623065948210719195434279217607981604138125422246147020331809152112129357175284493388192376243236330418262180519104150531068791102917036874268923498993210930347835411055313953
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGA...............................................................................................................................................211251049.0025104978263404017971416257928401858755136424196586359920721053252926131380108620732804133055742511338572827328211123036222189025026811219048029605815814597871091151122171743573302082862373453122649264020183721320216279379380834033081170731947712513133511504114392200857657520882478
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT............................................................................................................................................241179048.0017904869324021943417948696271016603039309847652618812466486559364615975968254331098744054673210869768672576176736983263108636755211244368783241295109423618418820011380188135148278215381376246325272312259165528551571773581602471063750421959466159434035786024560943641625
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC.............................................................................................................................................23178037.0078037178614472317852660621021621989527270914134995191319371685278028001472217610311541764672742662281495630473134012234143273651692421233001522226534249816194075131891032212819118720218933724071133
.......................................................................................................................................................................................TGAGATCATTTTGAAAGC..................................................................................................................................................18176412.00764122438899121548223822656566124010206100142235758016460755175524512427319211425740941035929473157155977312810912023420939735120229524324619815182586356930197323281335106451135569717557807266742633520126164
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................23176332.007633221506101920820791486809152063212281683271969037425546626515726515660930318719647435552649016255452231375640413493731120209579297280279546267520569406558477926124135959706263397176341513324268335191723751073128916711996169177231364306
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA.............................................................................................................................................23169528.00695281184942296115246028410214795141215029827756629911139324017928021534983689257115391033702690247730122526510731669109410431448355358861483350292859185227212616548021314039211791586251572049053556389835532458254828373152242262764122762695
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCT.................................................................................................................................................19132327.003232774669819717743578724322319942111113147365254119453913291194358449306713375160781321594514044151373473525172625132540111020340249465179411827116211314211930263822281524281045122123
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTG................................................................................................................................................20128337.002833742020673863546501381190814655514861848929048751126664941057611381648623510848069129163943943776334295031849011012202354053474038321907259821728710197641622071551201801105416245255
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA............................................................................................................................................24128056.002805655112120738933213361922716213642182623231688129017516412818133558949239710748743592591013121136156781198184884888919220393530202517173712246412113024536020271119293124352270243177514548711175141614391963745124169
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATT.............................................................................................................................................22123478.00234781016226843034810011000223951220751426385188191471834253276000000000001000000012162725621101922813121400034
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC............................................................................................................................................24120602.0020602109276143062023116355252112201059527831440192236308112429347135668781701169911093454130810128761829193204803103302106433242202820219430983644148239941046243177160562162
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA.............................................................................................................................................23117526.001752617401481908342100191332322210713133234233517012111915321265944301991314329201196620892718900236341229072106178151216115179182107355052722392504
..................................................................................................................................................CGGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................22115690.00156902308751203284668104266420369001694535522510171233361916653946181128016066228324474835167151130286137258284192284246202157113223179245323485110117511735416758248285514104
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAAA...........................................................................................................................................25114579.00145791212113815113030082815200000001318428173491116109190135148881000173832191511810223597331012110001193331632440153720714310811813912695536939513551753
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA..............................................................................................................................................22113990.0013990122648450266102134131224208916383062325132925352223143631313012321714292312401417205037302118242433172916711510824259196777301716158914221356538473480410464372905179213815947
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA..........................................................................................................................................26112659.00126590013916260254019142283515101322101294333121195458101201210587104915518726544663399452282713131115975660112270005761203722971613102991712272582861132529101134
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGAT..............................................................................................................................................2119936.009936910963636285111715161352128211390111352140121013500000000000000000104173260000043275711255
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGG...............................................................................................................................................2118720.0087201646650174263100000011010010110002110002001014040001120034032522321110800033091967337449130001
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA............................................................................................................................................2418233.008233814155763554501208252323136661066188318981309132635021462788223393337224181182727312466314210019361301845495384058121618012311715414444079100376482
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGAC....................................................................................................................................................................................2218035.0080357582162722962297544151637702146381533143298363239205649948941124123216889145801000465274122891715431181251162072257873738362432991591611852351619214943
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC..............................................................................................................................................2217655.00765524813865940321092871271291651512131925104118343919321065109741212774131240100000200030001019113812037508343237411185121013161078
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA...........................................................................................................................................2515440.00544002473324443051171717191431131439175422112941424223206164894370712357318996126433403111000000412602596815395591561791019515214650693957
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACC...................................................................................................................................................................................2314334.004334173576403339394006000032111311249210012194210600004140001000000000001042142103201106773000000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT...........................................................................................................................................2513481.0034810717718148339882150013101891133021251702318940916172381741541627520314671128861499021101102501011104738443317400139728600000
...........................................................................................................................................................................................ATCATTTTGAAAGCTGAT..............................................................................................................................................1813127.003127225711752837806037183241151647891148173113166451014251410200224400000000000000001102135102600015221310000
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT..............................................................................................................................................2312959.00295917481651362264655115527762821617269366351016863807231356022006861111251710202110188561313601011413350342137182258284448613
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG.............................................................................................................................................2311952.001952268510243621144947222189351651415613111836281232201012131022161719712472901201120003231100416148943013524283067626044438015441118
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG............................................................................................................................................2411823.00182324482523826405833925714432392525252029354125146055394415455030327024195443010000000010000003293486420902155382923393901112
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAAA............................................................................................................................................2411719.0017190011171000000001000000000020001100201341102333012020100000026001060377305202161113616181095056220242
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG..............................................................................................................................................2211519.0015196821830631419796154321171797143118421540502443132104211000000001000010000940100417022149261121781211177113331
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGA.....................................................................................................................................................................................2111396.001396925468259561572630113018121612710413131512241655723083714683733101000000002110201442368611841601710067221141
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT............................................................................................................................................2311303.001303101246140000210000020010001000100111101100000000000000100000000001240000000020000000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTAAA.........................................................................................................................................2711168.0011680014980601001630101110124364113152320211301141457177280452101000000000000020107735282615919639811311414
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGA...............................................................................................................................................2011082.0010821410481101000000020010000030010000002000001000000000000100000003500010001001200011
...........................................................................................................................................................................................ATCATTTTGAAAGCTGATT.............................................................................................................................................1911037.001037811128183466862729499111151510191464481337839462865325114148590000000000000000100211692600038301418211900000
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT.............................................................................................................................................2411022.0010223928399137000000443240212112121304310110031000005534378114211230841400021388824242969801120
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGA...............................................................................................................................................221942.00942154328310230010000621132011110312203010000011111155310468864104291612031214149124589911010910027
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATCC............................................................................................................................................241916.0091601351101071800400001429366226519426039246512483082000081570000000000000000000066297400021212300000
.........................................................................................................................................................................................AGATCATTTTGAAAGCTGATT.............................................................................................................................................211859.0085923578131412010002111527664862344271112001001260000000000000000010214001300031115100000
............................................................................................................................................................................................TCATTTTGAAAGCTGATT.............................................................................................................................................181749.0074912141221911194944500314137153955717924431535116431116150000000000000001100140195210630473449474910020
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTAA..........................................................................................................................................261676.0067601302150000033500303016421156031464764266853934111110000000000000000102116021545221967111300123
...................................................................................................................................................GGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................211668.006681972891600121530000540640003269185930702000000000002021002320245936802000059943422555300000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTA...........................................................................................................................................251641.00641002516240000043231251579313164188364624205244242456172310101200001010000000000132020312013141615141210000
..................................................................................................................................................CGGTTTTCGATTTGGTTTGACC...................................................................................................................................................................................221625.0062518765511010000000000000100000010110100000000000000010000100000100000000040001100000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTTT..........................................................................................................................................261562.00562054533135107100025211739112652836333115153512453130320023000000000000000001022810093000811829400000
..................................................................................................................................................CGGTTTTCGATTTGGTTTGAC....................................................................................................................................................................................211532.00532104095113506011100034010000110013300111101024000102112220201000845301600150442123272500000
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACTT..................................................................................................................................................................................241505.005052091198320412120000312302007001115111000100020000000020000000015176252910045352600011
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATCA............................................................................................................................................241459.004590012083818008002332115320212152265254184224521235224810000000000000000010313111201000002000010
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTCC...........................................................................................................................................251448.00448111805457001000061301453958101224263932540280000252000000000000000000000141100093619200000
..........................................................................................................................................................................................GATCATTTTGAAAGCTGATT.............................................................................................................................................201430.0043031195275171112110101651016913561013847824251122711000000000000000000016350000010000000000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGT...............................................................................................................................................211385.003855215931910012000091139741041100020371508010031400000000000000000020855900030014012110021
.........................................................................................................................................................................................AGATCATTTTGAAAGCTGAT..............................................................................................................................................201371.0037131027211113433200203020022102000320201110002000000000000000000160400000044441400000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGC...............................................................................................................................................211323.003231856413121900100005305332262120000010201100003200121000000110003105269500051116022200000
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATC.............................................................................................................................................221287.002870026514000000000000100000000100140000000001000000000000000000000000000000000000000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTCA...........................................................................................................................................251267.0026700140310110100100141154112673285261511154114131011621000000000000000000002102300041011500000
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACG...................................................................................................................................................................................231267.0026768143116000000000000000000001000000000000010000000100221100000901000001026111800000
.................................................................................................................................................CCGGTTTTCGATTTGGTTTG......................................................................................................................................................................................201264.00264316111059210100002223302041211210124110300010300000000000000000000191300000012144300000
....................................................................................................................................................GTTTTCGATTTGGTTTGACT...................................................................................................................................................................................201246.00246153117421700100102010000020002211010100100000000110000001101121650670012635116192200000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTC...........................................................................................................................................251212.0021200182065001000016170328481211233232263701000009000000000000000000001010000000000000000
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATA.............................................................................................................................................241209.0020900316002000001110000000001000010010011000000001111303240000820201044425421713102050313
......................................................................................................................................................TTTCGATTTGGTTTGACT...................................................................................................................................................................................181198.00198101937411802200002101103002110010310101002100101100001101110170000022021512710111410000
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACA...................................................................................................................................................................................231193.001931319151030000052001100000130420103505342200000000010000000002541606895448312148475
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTTA..........................................................................................................................................261192.001920161124304003001134123302376912313733178234000010000000000000003306010066429600000
........................................................................................................................................................................................GAGATCATTTTGAAAGCTG................................................................................................................................................191185.00185111780001000000000000020000000000000000000000000000000000000000000000000200000000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGACA.............................................................................................................................................231181.0018101210000000001000000001200010000202121520000100000000000010138010502524203041151278
.......................................................................................................................................................................................TGAGATCATTTTGAAAG...................................................................................................................................................171170.00170000000000000000000000000000000000000000000000000000000012651021003422812160000001400613
..................................................................................................................................................CGGTTTTCGATTTGGTTTGACTG..................................................................................................................................................................................231170.0017015101630601000002012010010001311220100005200000000201001000058030350001418510171100000
..........................................................................................................................................................................................GATCATTTTGAAAGCTGAT..............................................................................................................................................191150.00150286320113592200120250202012011300201000012000000000000000000151121000020010100000
......................................................................................................................................................................................GTGAGATCATTTTGAAAGC..................................................................................................................................................191150.00150142100000000000000000000000000000000000000000100016112200291000000002031152420600000
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATA.............................................................................................................................................221148.00148001360000000000000010000001010000100010100000000000000000000001000000011000000012
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACTC..................................................................................................................................................................................241145.001458172060260000000310122210200014114120000030000001010010000000105660000545410410001
droMoj3
TATCTCTGTCTCT-C--TCTAACGTGCTCACTGTCTC---------------------------TCCCTCTCTCTCTCTCTCTCTCTCTCTTTGTGTGTTGGTCGCCGT---------TTATCTCACTATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTTTTTTATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATAACCACA--------------------------------------TTCCACATCCCAATGGT------------------------------------TTTT-------GTGTG----------CCCTGSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT.............................................................................................................................................2312060835.0020608354292952926429115867761217159269226
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT..............................................................................................................................................2211235924.001235924200864738182905081334317040533818
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................231112710.00112710125371285509881935293969
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC.............................................................................................................................................23168715.00687153343395431793562616736
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGA...............................................................................................................................................21154251.005425122077185269476321001311650
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT............................................................................................................................................24145408.004540812657106311613488197797260
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATT.............................................................................................................................................22127339.0027339250208710227420
..................................................................................................................................................CGGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................22126648.0026648202244912323623290528
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC............................................................................................................................................24120787.0020787107341056519298266723
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC..............................................................................................................................................22119640.00196404961378919224180
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACC...................................................................................................................................................................................23116919.00169197220169035
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGAT..............................................................................................................................................21112887.001288712471215635826
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA.............................................................................................................................................2319166.00916632661511012584623767
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTG................................................................................................................................................2017792.0077923606315871519701979
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGAC....................................................................................................................................................................................2216318.0063181329361692894233262
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA............................................................................................................................................2415630.0056301998125551862438828
..................................................................................................................................................CGGTTTTCGATTTGGTTTGACC...................................................................................................................................................................................2214439.004439100044380
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCT.................................................................................................................................................1913327.003327988162115541331425
.......................................................................................................................................................................................TGAGATCATTTTGAAAGC..................................................................................................................................................1812581.00258127512044222615
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA..............................................................................................................................................2211394.00139446191546712151
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG.............................................................................................................................................2311350.0013501116734115735
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGA...............................................................................................................................................2011222.0012221201011082
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA............................................................................................................................................2411109.00110961993445222
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT..............................................................................................................................................231979.00979191123513422225
..................................................................................................................................................CGGTTTTCGATTTGGTTTGAC....................................................................................................................................................................................211924.0092414715287457
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAAA...........................................................................................................................................251904.0090458070527933
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA..........................................................................................................................................261862.0086249890032332
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGA.....................................................................................................................................................................................211854.008545444486212373
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT............................................................................................................................................231839.00839796000430
.........................................................................................................................................................................................AGATCATTTTGAAAGCTGATT.............................................................................................................................................211824.008245773152335
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA.............................................................................................................................................231638.0063825214935319
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTC............................................................................................................................................231613.0061360700231
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT.............................................................................................................................................241470.0047025571018819
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACTT..................................................................................................................................................................................241463.0046328006129966
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACTC..................................................................................................................................................................................241401.00401200141426156
..........................................................................................................................................................................................GATCATTTTGAAAGCTGATT.............................................................................................................................................201396.003961270232604
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG............................................................................................................................................241393.00393236112345456
.........................................................................................................................................................................................AGATCATTTTGAAAGCTGAT..............................................................................................................................................201332.00332281023379
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA...........................................................................................................................................251328.0032821330210010
...........................................................................................................................................................................................ATCATTTTGAAAGCTGATT.............................................................................................................................................191328.00328970062187
............................................................................................................................................................................................TCATTTTGAAAGCTGATT.............................................................................................................................................181309.00309652142316
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATC.............................................................................................................................................221287.002871630011221
...................................................................................................................................................GGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................211275.002751511111147
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT...........................................................................................................................................251265.0026513829393938
...........................................................................................................................................................................................ATCATTTTGAAAGCTGAT..............................................................................................................................................181253.0025336221341159
..................................................................................................................................................CGGTTTTCGATTTGGTTTGACTC..................................................................................................................................................................................231203.0020371311173170
.................................................................................................................................................CCGGTTTTCGATTTGGTTTG......................................................................................................................................................................................201185.001851411817315
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATA.............................................................................................................................................221179.0017917200070
..........................................................................................................................................................................................GATCATTTTGAAAGCTGAT..............................................................................................................................................191175.00175940106119
........................................................................................................................................................................................GAGATCATTTTGAAAGCTG................................................................................................................................................191174.0017417300001
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG..............................................................................................................................................221168.00168234113581518
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTCA...........................................................................................................................................251168.001681020217146
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTCC...........................................................................................................................................251163.001631180517023
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGT...............................................................................................................................................211137.001373422153522
droWil2
TCTT----CGTCTAC--C---------------------------CT--GA--------------------------------TG----ATTTGTTTTT-------TTTTCATACATTTTTTT--G--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACAGAAAAAAAAAGAAGAAAAAAAAATAACGATCATCATCTTGCCACATTCCGATGGCT--------------------------------------------------------------C-TGSizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT..............................................................................................................................................2211510720.00151072012309248839156698499883682208
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT.............................................................................................................................................2311158616.001158616186573118121122846542036189040
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGA...............................................................................................................................................21195298.0095298722397493438459135269
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT............................................................................................................................................24140660.00406605818431223371014218051
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................23130298.0030298159421217432114171290
.......................................................................................................................................................................................TGAGATCATTTTGAAAGC..................................................................................................................................................18126763.00267632649589413738
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGG...............................................................................................................................................2119895.00989598734846
..................................................................................................................................................CGGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................2218520.00852051682751122599366
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATT.............................................................................................................................................2217052.0070524667932012073
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTG................................................................................................................................................2016813.00681329721647800497897
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA.............................................................................................................................................2313833.0038335647392062137187
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGAC....................................................................................................................................................................................2213654.00365430151361539593
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC..............................................................................................................................................2213293.003293190625156403803
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA............................................................................................................................................2413285.0032853335802611877234
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGAT..............................................................................................................................................2113221.0032214828921764200
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC.............................................................................................................................................2312876.002876893251209552971
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCT.................................................................................................................................................1912300.00230052268491491998
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA..............................................................................................................................................2211611.00161166519680242428
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACC...................................................................................................................................................................................2311059.001059104421102
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT..............................................................................................................................................231907.00907964328607133
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGA...............................................................................................................................................201409.004098386645
..................................................................................................................................................CGGTTTTCGATTTGGTTTGAC....................................................................................................................................................................................211404.004042801828816
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC............................................................................................................................................241392.00392100133284982
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG............................................................................................................................................241378.0037822363273332
..................................................................................................................................................CGGTTTTCGATTTGGTTTGACC...................................................................................................................................................................................221341.003413380021
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA..........................................................................................................................................261338.0033849502372
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG..............................................................................................................................................221315.003152158113942
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGA.....................................................................................................................................................................................211299.0029937161146324
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG.............................................................................................................................................231279.0027915838145118
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA.............................................................................................................................................231273.002734510751106
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA............................................................................................................................................241264.00264168721581
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT............................................................................................................................................231258.002580255012
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT.............................................................................................................................................241213.0021344824803
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACG...................................................................................................................................................................................231198.001981960020
.........................................................................................................................................................................................AGATCATTTTGAAAGCTGATT.............................................................................................................................................211195.00195291441156
...........................................................................................................................................................................................ATCATTTTGAAAGCTGAT..............................................................................................................................................181187.001871328347636
.........................................................................................................................................................................................AGATCATTTTGAAAGCTGAT..............................................................................................................................................201173.00173287773130
...................................................................................................................................................GGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................211157.0015711828191
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAAA...........................................................................................................................................251140.001401530860
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGA...............................................................................................................................................221135.001357746462
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA...........................................................................................................................................251134.0013410432772
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT...........................................................................................................................................251125.00125124811846
............................................................................................................................................................................................TCATTTTGAAAGCTGATT.............................................................................................................................................181117.0011758382163
...........................................................................................................................................................................................ATCATTTTGAAAGCTGATT.............................................................................................................................................191111.0011119485327
..........................................................................................................................................................................................GATCATTTTGAAAGCTGATT.............................................................................................................................................20187.00874613712
........................................................................................................................................................................................GAGATCATTTTGAAAGCTG................................................................................................................................................19183.0083874100
..........................................................................................................................................................................................GATCATTTTGAAAGCTGAT..............................................................................................................................................19181.0081182361024
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGT...............................................................................................................................................21179.0079222014518
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGC...............................................................................................................................................21174.0074600239
......................................................................................................................................................TTTCGATTTGGTTTGACT...................................................................................................................................................................................18167.0067594031
.................................................................................................................................................CCGGTTTTCGATTTGGTTTG......................................................................................................................................................................................20167.00671537348
....................................................................................................................................................GTTTTCGATTTGGTTTGACT...................................................................................................................................................................................20163.0063544221
..................................................................................................................................................CGGTTTTCGATTTGGTTTGACG...................................................................................................................................................................................22149.0049490000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTTT..........................................................................................................................................26144.00448186012
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTAT...............................................................................................................................................21141.004111311313
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATA.............................................................................................................................................22139.0039237000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTCC...........................................................................................................................................25135.00359150011
.....................................................................................................................................................TTTTCGATTTGGTTTGACT...................................................................................................................................................................................19135.0035302030
..................................................................................................................................................CGGTTTTCGATTTGGTTTGA.....................................................................................................................................................................................20134.0034122182
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTA............................................................................................................................................23134.0034033010
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACA...................................................................................................................................................................................23132.0032652145
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTCCC..........................................................................................................................................26129.0029168005
.........................................................................................................................................................................................AGATCATTTTGAAAGCTGA...............................................................................................................................................19128.0028721000
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACTT..................................................................................................................................................................................24127.0027166230
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATCC............................................................................................................................................24126.0026491012
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTG................................................................................................................................................21126.0026221012
.....................................................................................................................................................................................AGTGAGATCATTTTGAAAGCTGATT.............................................................................................................................................25124.0024410451
........................................................................................................................................................................................GAGATCATTTTGAAAGCT.................................................................................................................................................18123.0023120002
dp5
---------------------------------------------------ATG--------TTTGGGACTA-----CTCCACCA----A---------------------------T--A----T--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTTATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGTTGTTTTT-TTC------GTTTTTTT-TTT-----------TTTTTTTGTGTG----------CC-TASizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT.............................................................................................................................................2311498015.00149801542755018925158431791664792193532141402408245595343
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT..............................................................................................................................................221685144.00685144265722342795153409997854460474178507161421141655
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT............................................................................................................................................24173354.00733542093369110142163921877489858697318617
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGA...............................................................................................................................................21172087.00720871738418104907464070357286864101529641718
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC.............................................................................................................................................23146802.0046802123094005361415213795012
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATT.............................................................................................................................................22129065.00290652279705714271831211249
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................23127107.00271071624485187786231762358871211136
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTG................................................................................................................................................20113513.00135138010484441387210631504169913
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGAT..............................................................................................................................................21113505.0013505813333544625721344
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC..............................................................................................................................................22113116.001311691701070519835660133000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA.............................................................................................................................................2318293.00829314595213641961451512811303525
..................................................................................................................................................CGGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................2215068.0050686413642734106456832293326
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACC...................................................................................................................................................................................2313957.003957633774170022000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA............................................................................................................................................2413570.0035707201360315814815735398267
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGAC....................................................................................................................................................................................2213026.003026141112413551764752117860
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCT.................................................................................................................................................1912193.0021931130111645113308289596
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGA...............................................................................................................................................2012174.0021740214943042192
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT............................................................................................................................................2312070.002070020091543001020
.......................................................................................................................................................................................TGAGATCATTTTGAAAGC..................................................................................................................................................1812032.002032694194865224111511486
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA..............................................................................................................................................2211644.0016442194129618714309826247
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC............................................................................................................................................2411390.001390438051637696429381
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGA.....................................................................................................................................................................................2111211.001211210423818104146392
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG.............................................................................................................................................2311015.0010154124620208143013002
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA.............................................................................................................................................231778.0077845991161323102470
.........................................................................................................................................................................................AGATCATTTTGAAAGCTGATT.............................................................................................................................................211757.0075716503759172000
.................................................................................................................................................CCGGTTTTCGATTTGGTTTG......................................................................................................................................................................................201649.0064946032011815150
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA............................................................................................................................................241629.0062915306144181910
..................................................................................................................................................CGGTTTTCGATTTGGTTTGACC...................................................................................................................................................................................221601.006012156433100000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAAA...........................................................................................................................................251466.0046623885803051000
........................................................................................................................................................................................GAGATCATTTTGAAAGCTG................................................................................................................................................191449.00449044900000000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA..........................................................................................................................................261416.0041613226122062200
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGT...............................................................................................................................................211378.00378226922113349010
..................................................................................................................................................CGGTTTTCGATTTGGTTTGAC....................................................................................................................................................................................211367.003674155168131822041
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT.............................................................................................................................................241349.003490305314332010
.........................................................................................................................................................................................AGATCATTTTGAAAGCTGAT..............................................................................................................................................201326.00326030344447000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT...........................................................................................................................................251326.0032602102214029335130
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATA.............................................................................................................................................221308.00308030431000000
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT..............................................................................................................................................231268.00268014245456417000
..........................................................................................................................................................................................GATCATTTTGAAAGCTGATT.............................................................................................................................................201234.0023401853112123000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG............................................................................................................................................241223.0022301781217664000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA...........................................................................................................................................251204.0020401501620013221
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG..............................................................................................................................................221196.001963219199558000
...........................................................................................................................................................................................ATCATTTTGAAAGCTGATT.............................................................................................................................................191179.0017931242017671010
...................................................................................................................................................GGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................211168.001682144120125002
...........................................................................................................................................................................................ATCATTTTGAAAGCTGAT..............................................................................................................................................181131.00131184544330000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTTT..........................................................................................................................................261129.00129096240715050
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGA...............................................................................................................................................221127.001271523078313328
............................................................................................................................................................................................TCATTTTGAAAGCTGATT.............................................................................................................................................181125.001252951412200000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGG...............................................................................................................................................211123.0012348351312285000
..........................................................................................................................................................................................GATCATTTTGAAAGCTGAT..............................................................................................................................................191113.0011319675102010
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTA............................................................................................................................................231108.00108010701000000
..................................................................................................................................................CGGTTTTCGATTTGGTTTGA.....................................................................................................................................................................................20191.009108511310000
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATC.............................................................................................................................................22177.00770164417000000
........................................................................................................................................................................................GAGATCATTTTGAAAGCT.................................................................................................................................................18162.006206200000000
droPer2
---------------------------------------------CGAAAAATG--------TTTGGGACTA-----CTCCACCA----A---------------------------T--A----T--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTTATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCCATGGTTGTTTTT-TTC------GTTTTTTT---------TTTTTT-------GTGTG----------CC-TASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT.............................................................................................................................................231546521.00546521692161191531104255954126810164346
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT..............................................................................................................................................221405555.004055553078240024218773810675601199165
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGA...............................................................................................................................................21139377.0039377117266782192432887027647
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT............................................................................................................................................24115905.00159056323831467261038354530
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................23113174.001317411000426309296430713
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATT.............................................................................................................................................2216856.0068563667233274126
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTG................................................................................................................................................2015363.00536351712194267113741540
.......................................................................................................................................................................................TGAGATCATTTTGAAAGC..................................................................................................................................................1814978.004978482485810492
..................................................................................................................................................CGGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................2214571.00457139071309194107242
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA.............................................................................................................................................2313225.00322544922147085214193
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGAT..............................................................................................................................................2112423.00242327233310121031
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGG...............................................................................................................................................2112059.0020592031103186
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCT.................................................................................................................................................1912031.002031137187187232598690
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA............................................................................................................................................2411575.00157521477854111221197
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGAC....................................................................................................................................................................................2211407.001407105211913558385
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC.............................................................................................................................................231805.00805256301577284143
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC..............................................................................................................................................221679.0067936526144613692
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA..............................................................................................................................................221587.0058714124711327185
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACC...................................................................................................................................................................................231528.0052852800000
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGA...............................................................................................................................................201365.00365034801610
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA............................................................................................................................................241319.00319632377183
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG..............................................................................................................................................221315.0031599107815797
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC............................................................................................................................................241303.0030337933508139
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGA.....................................................................................................................................................................................211286.0028661493365339
..................................................................................................................................................CGGTTTTCGATTTGGTTTGAC....................................................................................................................................................................................211248.00248228104123
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACG...................................................................................................................................................................................231227.0022722700000
..................................................................................................................................................CGGTTTTCGATTTGGTTTGACC...................................................................................................................................................................................221221.0022122100000
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT............................................................................................................................................231215.0021502140010
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA.............................................................................................................................................231213.00213401560197
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG.............................................................................................................................................231208.002087236315775
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT..............................................................................................................................................231206.002064419827126
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA..........................................................................................................................................261182.00182361431020
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGT...............................................................................................................................................211159.001595220158730
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAAA...........................................................................................................................................251158.00158291271010
.........................................................................................................................................................................................AGATCATTTTGAAAGCTGATT.............................................................................................................................................211142.00142111202171
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATA.............................................................................................................................................221137.0013701361000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA...........................................................................................................................................251126.0012622980033
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG............................................................................................................................................241109.00109186804127
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGA...............................................................................................................................................221101.0010167920518
......................................................................................................................................................TTTCGATTTGGTTTGACT...................................................................................................................................................................................18199.00999810000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT...........................................................................................................................................25193.00930261123420
.................................................................................................................................................CCGGTTTTCGATTTGGTTTG......................................................................................................................................................................................20190.009045607149
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT.............................................................................................................................................24177.00779611015
...........................................................................................................................................................................................ATCATTTTGAAAGCTGAT..............................................................................................................................................18171.007112402845
..................................................................................................................................................CGGTTTTCGATTTGGTTTGACG...................................................................................................................................................................................22169.00696810000
...................................................................................................................................................GGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................21168.006854130001
..........................................................................................................................................................................................GATCATTTTGAAAGCTGATT.............................................................................................................................................20167.006784123310
.........................................................................................................................................................................................AGATCATTTTGAAAGCTGAT..............................................................................................................................................20167.006715462211
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGC...............................................................................................................................................21165.00658118461
....................................................................................................................................................GTTTTCGATTTGGTTTGACT...................................................................................................................................................................................20163.00635830002
...........................................................................................................................................................................................ATCATTTTGAAAGCTGATT.............................................................................................................................................19157.005727141267
..........................................................................................................................................................................................GATCATTTTGAAAGCTGAT..............................................................................................................................................19152.005228116124
........................................................................................................................................................................................GAGATCATTTTGAAAGCTG................................................................................................................................................19150.00500500000
............................................................................................................................................................................................TCATTTTGAAAGCTGATT.............................................................................................................................................18143.004322131133
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTA............................................................................................................................................23138.00380380000
.....................................................................................................................................................TTTTCGATTTGGTTTGACT...................................................................................................................................................................................19136.00363600000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTTT..........................................................................................................................................26132.00321902713
droAna3
---------------------------------------------------------------------CT--------CC--------------------------------------------A--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTTATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGTATTTTTTT-TT-TTCTACGTTTTTG-----------GTTTT-----TTGTG-----------------SizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT.............................................................................................................................................2311134752.001134752642253967381245797698279065284569
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT..............................................................................................................................................221931328.0093132820855801382568644718224093535838
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT............................................................................................................................................24196772.00967724598107357095964883765929
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGA...............................................................................................................................................21136469.0036469463565422634290135977142
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC.............................................................................................................................................23120243.0020243271948926183215303
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA.............................................................................................................................................2318834.0088342457597300124327241
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTG................................................................................................................................................2017323.00732311719141106633831571
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................2317095.007095146924561251409701935
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA............................................................................................................................................2415961.0059612584318322145543375
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC..............................................................................................................................................2215958.0059582152851990138405
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATT.............................................................................................................................................2214110.00411034635189193566
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCT.................................................................................................................................................1913884.00388414941015740211811585
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGA.....................................................................................................................................................................................2112555.002555177112421126252261
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA..............................................................................................................................................2211546.00154610510992046169107
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGAT..............................................................................................................................................2111476.0014761255835616111
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA..........................................................................................................................................2611271.00127126120433143
.......................................................................................................................................................................................TGAGATCATTTTGAAAGC..................................................................................................................................................1811168.001168369681470476
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGAC....................................................................................................................................................................................2211157.00115733232697296322
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA.............................................................................................................................................2311063.0010632510178193
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG.............................................................................................................................................231914.0091412477166541303
.................................................................................................................................................CCGGTTTTCGATTTGGTTTG......................................................................................................................................................................................201879.0087971381348538
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAAA...........................................................................................................................................251789.007891375519011
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA............................................................................................................................................241761.007612870422331
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACC...................................................................................................................................................................................231714.0071417080014
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC............................................................................................................................................241619.006197029263987125
..................................................................................................................................................CGGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................221532.00532197107121051155
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT...........................................................................................................................................251495.00495712727880237
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA...........................................................................................................................................251422.004221139511131
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGT...............................................................................................................................................211367.0036734704921463
.........................................................................................................................................................................................AGATCATTTTGAAAGCTGATT.............................................................................................................................................211286.002868217637612
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT............................................................................................................................................231280.00280266110003
.................................................................................................................................................CCGGTTTTCGATTTGGTTT.......................................................................................................................................................................................191264.0026412430208928
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGA...............................................................................................................................................201253.0025323851342
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG............................................................................................................................................241231.0023148425287137
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTTT..........................................................................................................................................261192.001923940364766
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG..............................................................................................................................................221189.0018949320681732
..................................................................................................................................................CGGTTTTCGATTTGGTTTGA.....................................................................................................................................................................................201186.0018618300021
...........................................................................................................................................................................................ATCATTTTGAAAGCTGAT..............................................................................................................................................181185.0018512143810246
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT..............................................................................................................................................231182.00182693749108
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGC...............................................................................................................................................211127.00127110258317
.................................................................................................................................................CCGGTTTTCGATTTGGTT........................................................................................................................................................................................181122.00122416040134
..........................................................................................................................................................................................GATCATTTTGAAAGCTGATT.............................................................................................................................................201121.0012141563399
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCC.................................................................................................................................................191120.0012011170101
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTT................................................................................................................................................201100.0010081075331
............................................................................................................................................................................................TCATTTTGAAAGCTGATT.............................................................................................................................................18189.008913581287
...........................................................................................................................................................................................ATCATTTTGAAAGCTGATT.............................................................................................................................................19188.00881347241111
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGG...............................................................................................................................................21180.0080412010459
.........................................................................................................................................................................................AGATCATTTTGAAAGCTGAT..............................................................................................................................................20177.0077231521927
droBip1
-------------------------------------------------AAACG--------TTTGTAACT--------CC--------------------------------------------A--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TT-ATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGTATTTTTTT-TTATTTTACTTTTTTTGGGGTTTTGGT-TTTT-------GT------------------SizeHit CountTotal NormTotal
No Reads
droKik1
-------------------------------------------------AAACG--------TTTGTAACT--------CC-----------------------------------------------ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTAATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGTATTTTTTT-CTC---TTCGTTTTTTG-TGTGTTGTTGTTTG-------G-------------------SizeHit CountTotal NormTotal
No Reads
droFic1
---------------------------------------------CGAAAAACG--------TTTGTAACT--------TC--------------------------------------------A--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGCTGATTTTTGT------------------------TGTTTG-------GTGTG----------CC-TASizeHit CountTotal NormTotal
No Reads
droEle1
---------------------------------------------CGAAAAACG--------TTTGTTACT--------TC--------------------------------------------A--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGTTGATTTTTGT------------------------TGTTTG-------GTTTG---------------SizeHit CountTotal NormTotal
No Reads
droRho1
--------------------------------------------------------------TTTGTAACT--------TC--------------------------------------------A--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCAATGGTTGATTTTTGT------------------------TGTTTG-------GTTTG----------CC-TASizeHit CountTotal NormTotal
No Reads
droBia1
C--------------GCA---------------------------CGAAGATCG--------TTCGTAACT--------TC--------------------------------------------A--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCGACT-TTGT------------------------TGCTTG---------------------------SizeHit CountTotal NormTotal
No Reads
droTak1
---------------------------------------------CGAAAAACG--------TTTGTAACT--------TC--------------------------------------------A--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCGATTTTTGT------------------------TGTTTG-------GTGTG----------CC-TASizeHit CountTotal NormTotal
No Reads
droEug1
A-GC-----------GAA---------------------------TGAAAAACG--------CTTGTAACT--------TC--------------------------------------------A--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATG-CCACA--------------------------------------TTCCACATTCCAATGCTCGATTTTTGT------------------------TGTTTGGTGTTTGGTGTG----------CC-TASizeHit CountTotal NormTotal
No Reads
dm3
---------------------------------------------------GCG--------TTTGTAACT--------CC--------------------------------------------A--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCGATTTTTGT------------------------TGTTTG-------GTGTG----------CC---SizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT.............................................................................................................................................23177075950.007707595010111609649537617837763178910825798400203841193314037241192156738962691943136529379385131842158491998526233413081877324543122965435365004219981266640223457703636285479103700101504421322239166749730108051042033630000000000000000023321241331830319141253147039723851252124821023117452482071268879138578226017812545450193632193953414103469923381373152586032825994398568803850385024462451096736521383748295040293814126237941410591344098744151381511846670527235511134408283077718495383399267471150782124437149324970201592145563472235103896519715871148108346321565848698641555083754221674171076923590445510040306183743050543376148431356218256847112110991824805661665186136096127834269856676277899811139362878731225087510493738180681303014559864641757528243816645441251026229221632161526629113921284656137497732129410319315407224441311439942915169355630610215895015497364990033061774842424029183252171130020897011458534009401375206834786712261960193181444567952757250007132533471276153404305987514231837052772195530076335268680620253530626229744926695241820112958651886142686510189427219870497357626825669315697383157331767673226923162760615559711604141372746828893849812323111105655614742917130412855315271818483910137572263671534434544551343274885121177418307385664075340551138017305005408675526233528902347024079103878006481721871247732738151780266468738118381710296571877006127852211221176609219539440651725661819796939739525380628288123951669408235115819637559281911134
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT..............................................................................................................................................22157077407.005707740700004127423203492510250623434050594232759826103134756441288209563721031411146504788915181156511716516870119395840142473141712769717411314178339836283993188338820141558917271437155131771688994281900000000000000000476847293842388179458794042682046819249681632432201712539860299945601203761327115500486711314634367751921129982041599634756532892107693464595533363371159062852882187354629785106379102756840728263414315443650629862458012791825411358713485040865287387517833953370683588317299202389601281223041609097412302936100112538512448711751138860102794724894212563402109981066144831372246440763521514328475220110912755222374152141927232391186126371831711378713954951635366212673330161273174122918311752299505593625222734228132523591734676712216480245509295065506010678352494434883216211296719338021522822445749280030752218133124831647494675089281062346516318573277148521346028674151814860793732921051600121561475979853265380305180663158359981213852324621513103614934953738133699161260289573252162828153536426847840812711925764772066503473886475703478508812924630633908061535364527041240667969885060923894993625086086621469822380577090218771144775912328826356823011253001183620242236335342253628626127724054925130918855358991173430307190105456184113835561237219206471411697331499684758012672157473804452492863845370354368653782773443453213657818062298940323920782053
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGA...............................................................................................................................................2111906065.001906065000024102367651598192734024821739715902463175539557172417121362152162894542332251036898591962872653693227941202111941120110902941061136647400000000000000000983968769665508461726578216898942241329613644073425101025011752836163827703078142727655738324425345220171009207141330221722289842821044828521461798445392417950202123411988196721065150416242095141347988148051280603504093616418332160513364151672679211632285234150207793149419645818641114338316581108525567921809723562174348010781103135385014701024418821298162153927580138132217124513017129154240291482338721722224548850325982108107232544040791357110143945323010087865360011768074566103419511615316971057286813972137151751115162523574111207894359851255461557012569201839081274435446845711995399544225592468166743052835992296364573591732982392330272281952369136891518188603751289298782964411378330259804427307818343668353091289532337032763317808174687477268948310813707084532527910238631573212115035311622181640754251911313322689331341968528486261986127712169942394812484289843490831
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................2311429228.001429228000044139165410310101517540991217720803610544414703613634201165828665953411749814145977232058513548102239177353678778313119103203325818475396030000000000000000039845828340820361113119149610023131604446526619530672842124405816154324684683901316133172434458753681132643455203971029198367259492173791015869032329619131894043074610641913351333781111363180572880493753032132142271868236372463904266513477520108815457274787911909314232119837628354327791153622841189053913504093693286082463541964050620880814994744464531720631181411234793043731864179825545074962112669670578292498149235471121776129895463429605840037732120113727241355761249453148025633029272495544166896541076188131372941501643543449250439713675183499033804927942261230635665329016835719036806295118359343021073113471313798075119654421538484202660917744275931176707873589725528013330710244203220492206331341004200703142149964100452213510107513443063427861888926652339401703619062129235931044048343114284522444054753720281351930356161332840
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT............................................................................................................................................2411221852.00122185200001590243700560015020126106399001329961573063460665263095083865363251675301440329508415506280834981135835531700398923495307000000000000000005425694044534085854334011174291359460111433692177972819863328523917474104184023228616143010404118431145010803052160666743490000309151290300960996643400600100588591661238905819687375131980045147691915293018051301222230020631449680326836541827391233946811243478610281216934011184273151737012193420013203598666026404811075945872886611752154933851976154334548276277118501013740512441131215154281000396229493154437873020962313054108484861434728077264531330106041171013768330183028841163252038326055257509943848615279878257551148941184110438334165695572426130321716116019146883185452639120165538512209855379448167942241818021310675443515543693894211032456374777130263977133133523629392258289526697650721963171214266607576391304911548811168135241406555252623374136413696361763039268101071117801087
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCT.................................................................................................................................................191319092.003190920000000000000000380097677040346554582138410070875354945528768581714997441027737131145257164115380006387240000000000000000045404230120513172464033022152217188115952631613691444382144221611427803109303923028851303181935262200021410118450140813854555106711179807711360527619910600102234810351169243551242750721200564024579410874434160152224741146489371470187413320912731116106000902121631596416986822111507990041354525338542544017475253741876681262849181029492291931014100010365843751022581432142137134163464205212315268286465542786295917561744255515109445910119531962121329314111952186190254251260666072948286724637318585701330550274510991066127718101557023403071592174030572912729910042731119124412988909688349537134152334032277912133211681707897118510324019716155769488310411389609331321243166201654
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTG................................................................................................................................................201273697.002736970000231000423153503887003573947866067529334721309308912308852911061007328115218301274783701381831867025004942838217000000000000000000859175538901119183762841644718176832799372311323494449853501641598614108966525274235150192401227021619089155188101284962159108504518420231918424710975076104321297247303405198555022998147952072603133321736528341627891084226739139227351046914459876081030412320047701688336234226582130601501606464604784396787810737812031463038219380378229456313776000034133412602163392817177171278262814243421530201031166411869512838371972197214953217793751030210517451552376555124512161346228453329053012250202158271173279170877273491628107720292238208378514337346017754621088239515131827716741571103697461059591101348629916700313923734823251354852097125651119441050514691267133010631990826388827654394742737
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....................................................................................................................................................GTTTTCGATTTGGTTTGACT...................................................................................................................................................................................2013676.003676000000000000000000001010094110000000010000000000011002700000000000000000000000001000000000000000000000000000000000000100000000200000200000000110005111000003114143014411441701002120102110026264521003002000010574465405484363210000001088423341435408116395310600003401010020021304100742120500436211149264324518543109143251012882833620251667961541122095341429046212120311730
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT...........................................................................................................................................2513530.00353000001000000000000000242000100000001120422590113131502000107691900000000000000000321816150002001072010011220005224836412133520000811400000010805300002010100280021441233168140000003723101250112301300926034025031005810101716611200070100000002011000000433617345323281261212297001932005047133967948504241090934734434564241421425964124540637676127519035735331925240431451334017133141117567971982729521412198115491597810488231171130
.........................................................................................................................................................................................AGATCATTTTGAAAGCTGAT..............................................................................................................................................2013452.0034520000000000000000000000000017110000000000010010100100105660010000000000000000004003000000100000000021002002090000020010010000020000000010001400215015530915400210016582144382201864504010811112010042461803312000001000000003000000084603412122258433390090000234213651421341503669425391611032533241111611713209114215103931734111510342912922300100340170200332495402277397343532410513316121510832160590
droSim2
---------------------------------------------------GCG--------TTTGTAACT--------CC--------------------------------------------A--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCGATTTTTGT------------------------TGTTTG-------GTGTG----------CC---SizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT.............................................................................................................................................2312180426.002180426429571162569374206208482134743587518564217196719119812521919528580118281339756818
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT..............................................................................................................................................221960993.0096099337766814585710462740332457414056133791130174374414132759103826199560112
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGA...............................................................................................................................................211421115.004211152348517509735191623551131416291071135112758111795011437156463004
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................231183520.00183520418151383297394302279720496895720337783133922255531734017
.......................................................................................................................................................................................TGAGATCATTTTGAAAGC..................................................................................................................................................181133946.001339467135616669141894051921405169689318012035201001
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCT.................................................................................................................................................191130564.00130564427247841292413841515018822941211774312412000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGG...............................................................................................................................................21158518.0058518352601496382293100891312200000
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGAC....................................................................................................................................................................................22151132.005113226347807910158325577139785682911529412691006730023
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTG................................................................................................................................................20146760.004676014745464481491019256995845118113121508118125818011
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA.............................................................................................................................................23146081.004608121881254179614840048284955163091155014801673634000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA............................................................................................................................................24132777.003277784554514721424003261315511076750712972561234705000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT............................................................................................................................................24122625.002262574662814137044401776133021227304812612241132000
..................................................................................................................................................CGGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................22118939.00189393974803125663083638149318216328728006
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC..............................................................................................................................................22114259.00142599158271819482800283341292007510000
..............................................................................................................................................................................................ATTTTGAAAGCTGATT.............................................................................................................................................16112605.001260500000016137418812314000000
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACC...................................................................................................................................................................................23112354.00123543849948754630022112000000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA..............................................................................................................................................22111631.001163144262161698310002915271445131820419130102000
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATT.............................................................................................................................................22110776.00107769532161964021542812104333692844002
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA..........................................................................................................................................2618689.0086899619725200515486344834492919270000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC.............................................................................................................................................2316968.00696830691011205277004045452149411301000
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGA.....................................................................................................................................................................................2113571.0035712508733176347100824118156547017314319004
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACG...................................................................................................................................................................................2313338.003338633340235110061123000000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA............................................................................................................................................2412773.00277351421361460011912090393663467186000
...........................................................................................................................................................................................ATCATTTTGAAAGCTGATT.............................................................................................................................................1912657.00265767101411010021692398300000
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGAT..............................................................................................................................................2112501.00250114125581998711480020283000000
.............................................................................................................................................................................................CATTTTGAAAGCTGATT.............................................................................................................................................1712461.0024610000005525512375000000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG..............................................................................................................................................2212109.00210987164437370004301238400000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAAA...........................................................................................................................................2511947.0019479647100001131238616461731012000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG.............................................................................................................................................2311917.001917491290561710013511336341612410000
...........................................................................................................................................................................................ATCATTTTGAAAGCTGAT..............................................................................................................................................1811872.0018722251541127961798200000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA...........................................................................................................................................2511827.001827181114899006675542513184414819000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA.............................................................................................................................................2311823.0018232171161942260099993723803493839000
.................................................................................................................................................CCGGTTTTCGATTTGGTT........................................................................................................................................................................................1811758.001758418374441232102217100000
..................................................................................................................................................CGGTTTTCGATTTGGTTTGACC...................................................................................................................................................................................2211356.0013563664594500000000000000
..............................................................................................................................................................................................ATTTTGAAAGCTGAT..............................................................................................................................................1511298.001298000000313161275000000
..................................................................................................................................................CGGTTTTCGATTTGGTTTGAC....................................................................................................................................................................................2111238.00123830062707272254526521600003
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACTT..................................................................................................................................................................................2411145.00114570332373370011012103000
............................................................................................................................................................................................TCATTTTGAAAGCTGATT.............................................................................................................................................1811143.0011431213316981521917775200000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC............................................................................................................................................2411076.001076121386117900164149142941081901000
.................................................................................................................................................CCGGTTTTCGATTTGGTTTG......................................................................................................................................................................................201983.009839136164017955613128250115000
...................................................................................................................................................GGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................211877.00877579631162513574569000000
.......................................................................................................................................................................................TGAGATCATTTTGAAAG...................................................................................................................................................171843.0084300000026162037744000000
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACA...................................................................................................................................................................................231823.0082333185011001041092941886541000
...............................................................................................................................................................................................TTTTGAAAGCTGATT.............................................................................................................................................152815.50163100000010920681524000000
..........................................................................................................................................................................................GATCATTTTGAAAGCTGATT.............................................................................................................................................201784.00784401535210102722200000
......................................................................................................................................................TTTCGATTTGGTTTGACT...................................................................................................................................................................................181718.0071820480406000000027100000
.................................................................................................................................................CCGGTTTTCGATTTGGTTT.......................................................................................................................................................................................191703.007034017182491311111000001
..........................................................................................................................................................................................GATCATTTTGAAAGCTGAT..............................................................................................................................................191613.00613357247010000538100000
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT..............................................................................................................................................231613.006131334428723122201536500000
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGA...............................................................................................................................................201562.0056215562767716041729000000
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGAA....................................................................................................................................................................................221527.00527502400776123612415300000
.........................................................................................................................................................................................AGATCATTTTGAAAGCTGATT.............................................................................................................................................211515.005155612822943412814520401000
....................................................................................................................................................GTTTTCGATTTGGTTTGACT...................................................................................................................................................................................201493.0049322127182311100155100000
.....................................................................................................................................................TTTTCGATTTGGTTTGACT...................................................................................................................................................................................191396.0039615639182000002017000000
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT.............................................................................................................................................241395.00395591716710911362817500000
..........................................................................................................................................................................................GATCATTTTGAAAGCT.................................................................................................................................................161377.003770000000000377000000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG............................................................................................................................................241362.00362642764850078392528168000
..................................................................................................................................................CGGTTTTCGATTTGGTTTGACG...................................................................................................................................................................................221360.00360431330400000000000000
.........................................................................................................................................................................................AGATCATTTTGAAAGCTGAT..............................................................................................................................................201274.002741181849651021128900000
............................................................................................................................................................................................TCATTTTGAAAGCTGAT..............................................................................................................................................171264.002640000000215256000000
.............................................................................................................................................................................................CATTTTGAAAGCTGAT..............................................................................................................................................161257.002570000001025249000000
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT............................................................................................................................................231244.0024401022421400003000000
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGA...............................................................................................................................................221217.0021796148530076131100000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCC.................................................................................................................................................191203.00203321250000000154000000
.......................................................................................................................................................................................TGAGATCATTTTGAAA....................................................................................................................................................161195.001950000009211219134000000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGT...............................................................................................................................................211179.001798733101700437412101000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTAAA.........................................................................................................................................271179.0017900310081172749010000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT...........................................................................................................................................251176.00176631436130000521744000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGC...............................................................................................................................................211172.00172109291400013348100000
........................................................................................................................................................................................GAGATCATTTTGAAAGCT.................................................................................................................................................181144.0014450032265001048000000
.......................................................................................................................................................................................TGAGATCATTTTGAA.....................................................................................................................................................151137.00137000000146441441000000
........................................................................................................................................................................................GAGATCATTTTGAAAGCTG................................................................................................................................................191133.001331320331750000117000000
...........................................................................................................................................................................................ATCATTTTGAAAGCT.................................................................................................................................................153125.333760000000000376000000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAAA............................................................................................................................................241125.00125651412009323404045000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCG.................................................................................................................................................191116.001164400000000108000000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTA................................................................................................................................................201113.00113910220089202330000000
.................................................................................................................................................CCGGTTTTCGATTTGGT.........................................................................................................................................................................................171110.001100000001000109000000
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATA.............................................................................................................................................22193.0093100780002750000000
droSec2
---------------------------------------------------GCG--------TTTGTAACT--------CC--------------------------------------------A--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCGATTTTTGT------------------------TGTTTG-------GTGTG----------CC---SizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT.............................................................................................................................................2311555332.001555332248040442750655609208933
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT..............................................................................................................................................2211425771.00142577169676573987367894414214
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT............................................................................................................................................24154196.0054196734314482835524016
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGA...............................................................................................................................................21138650.00386501006914418302111142
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................23124530.002453048805375117912484
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATT.............................................................................................................................................22113261.0013261129896816044
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTG................................................................................................................................................2018831.008831229331135172908
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA............................................................................................................................................2414346.004346113316241074515
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGAT..............................................................................................................................................2114043.0040433845715968
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCT.................................................................................................................................................1913481.0034814166078721586
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA.............................................................................................................................................2313435.0034359971056858524
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGAC....................................................................................................................................................................................2212094.002094560566414554
..................................................................................................................................................CGGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................2211792.001792513137106577
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC.............................................................................................................................................2311355.001355118585444208
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA..............................................................................................................................................2211242.001242305450179308
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC..............................................................................................................................................2211181.00118150536274321
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGA.....................................................................................................................................................................................211650.0065027617664134
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACTT..................................................................................................................................................................................241630.00630228322575
.......................................................................................................................................................................................TGAGATCATTTTGAAAGC..................................................................................................................................................181591.005911291344117
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT..............................................................................................................................................231527.00527375840923
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGA...............................................................................................................................................201480.00480467427
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC............................................................................................................................................241416.00416171978563
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT............................................................................................................................................231382.00382379111
.........................................................................................................................................................................................AGATCATTTTGAAAGCTGATT.............................................................................................................................................211299.002992566343
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGT...............................................................................................................................................211222.002224988481
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACTA..................................................................................................................................................................................241211.0021122103779
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG.............................................................................................................................................231207.0020778525126
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG............................................................................................................................................241202.00202135301621
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT.............................................................................................................................................241195.00195997845
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA.............................................................................................................................................231191.0019177504123
.................................................................................................................................................CCGGTTTTCGATTTGGTTTG......................................................................................................................................................................................201157.0015766351244
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT...........................................................................................................................................251148.001484749547
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG..............................................................................................................................................221142.0014220473738
.........................................................................................................................................................................................AGATCATTTTGAAAGCTGAT..............................................................................................................................................201137.0013765103626
...........................................................................................................................................................................................ATCATTTTGAAAGCTGAT..............................................................................................................................................181136.0013618443242
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA............................................................................................................................................241118.001184417498
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA...........................................................................................................................................251115.001156714286
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA..........................................................................................................................................261112.00112616423
...........................................................................................................................................................................................ATCATTTTGAAAGCTGATT.............................................................................................................................................191106.001063395311
............................................................................................................................................................................................TCATTTTGAAAGCTGATT.............................................................................................................................................181103.00103326623
........................................................................................................................................................................................GAGATCATTTTGAAAGCTG................................................................................................................................................19196.009696000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGG...............................................................................................................................................21189.0089701054
..................................................................................................................................................CGGTTTTCGATTTGGTTTGAC....................................................................................................................................................................................21185.0085525244
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACA...................................................................................................................................................................................23170.007028191211
..........................................................................................................................................................................................GATCATTTTGAAAGCTGATT.............................................................................................................................................20159.0059453110
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTAT...............................................................................................................................................21157.00572614116
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTA............................................................................................................................................23157.005756010
...................................................................................................................................................GGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................21156.0056306128
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTT................................................................................................................................................20154.00541817415
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATA.............................................................................................................................................22153.005353000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTTT..........................................................................................................................................26151.00511225311
.................................................................................................................................................CCGGTTTTCGATTTGGTTT.......................................................................................................................................................................................19150.00505111816
..........................................................................................................................................................................................GATCATTTTGAAAGCTGAT..............................................................................................................................................19140.0040152221
.................................................................................................................................................CCGGTTTTCGATTTGGTT........................................................................................................................................................................................18139.003960330
..................................................................................................................................................CGGTTTTCGATTTGGTTTGA.....................................................................................................................................................................................20135.003524182
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAAA...........................................................................................................................................25133.0033111192
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGAG..............................................................................................................................................21130.003030000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTTT...............................................................................................................................................21130.003046155
droYak3
A--------------------------------------------CGAAAAGCG--------TTTGTAACT--------CC--------------------------------------------A--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCGATTTT-GTT------GTTGTTGT-TGT-----TGCTCG-------CTGTGCTATACTGTGCTGTGSizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT.............................................................................................................................................2313163085.003163085110842334241235645343805187591066021921771106189
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT..............................................................................................................................................221788096.007880966768688021333419576591064558451171945035262
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................231292659.00292659103325334272676236114837714220018
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC.............................................................................................................................................231125737.0012573790010512438758181521170000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGA...............................................................................................................................................21165947.006594732267892613781233999470550290106
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACC...................................................................................................................................................................................23163282.0063282118406209500120000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT............................................................................................................................................24160458.00604583873123493345711617434730404900096
..................................................................................................................................................CGGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................22135854.00358541625735329873352358901000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC..............................................................................................................................................22124545.0024545170270225303413811150000
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATT.............................................................................................................................................22121872.00218723419369241218213240000
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGAC....................................................................................................................................................................................22119391.001939144425841399787349110310349
.......................................................................................................................................................................................TGAGATCATTTTGAAAGC..................................................................................................................................................18114490.00144901132310130072104230020
..................................................................................................................................................CGGTTTTCGATTTGGTTTGACC...................................................................................................................................................................................2217941.0079411892774910000000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGG...............................................................................................................................................2115615.0056155552432211770000
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGAT..............................................................................................................................................2115539.0055393253231481519110000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA.............................................................................................................................................2314690.004690415753278098821843780000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTG................................................................................................................................................2014305.00430510361407162161576808460010
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA............................................................................................................................................2413666.003666255105314641103318355100017
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG.............................................................................................................................................2312564.00256410442230373063150000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCT.................................................................................................................................................1912202.0022023039651149562908671020
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA..............................................................................................................................................2211675.001675394278850115321050000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC............................................................................................................................................2411423.0014235921810549549290000
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGA.....................................................................................................................................................................................2111350.00135072574461174999750030
..................................................................................................................................................CGGTTTTCGATTTGGTTTGAC....................................................................................................................................................................................2111298.001298124521099210200000
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT............................................................................................................................................231796.0079607534200010000
.........................................................................................................................................................................................AGATCATTTTGAAAGCTGATT.............................................................................................................................................211638.006382146813901270000
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT..............................................................................................................................................231586.0058651563745416440000
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT.............................................................................................................................................241580.0058023198337100390000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG..............................................................................................................................................221548.00548200220204825260000
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGA...............................................................................................................................................201508.005083498401110000
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACG...................................................................................................................................................................................231483.00483198028302000000
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACTT..................................................................................................................................................................................241409.004097362242410270000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG............................................................................................................................................241371.0037157182572530380000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA.............................................................................................................................................231356.0035622332723112130000
..........................................................................................................................................................................................GATCATTTTGAAAGCTGATT.............................................................................................................................................201308.00308110918400670001
...................................................................................................................................................GGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................211304.00304635018510140000
...........................................................................................................................................................................................ATCATTTTGAAAGCTGATT.............................................................................................................................................191239.00239159112911020000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA..........................................................................................................................................261229.0022973618020030001
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT...........................................................................................................................................251205.00205485630634130000
droEre2
TAGC-----------GGA---------------------------CGAAAAGCG--------TTTGTAACT--------CC--------------------------------------------A--ATGATTTGACTACGAAACCGGTTTTCGATTTGGTTTGACTGTTT-TTCATACAAGTGAGATCATTTTGAAAGCTGATTTTGTCAATGAATA-CCACA--------------------------------------TTCCACATTCCGATGGTCGATTTTTGT------------------------TGCTTG-------CTGTG---------------SizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATT.............................................................................................................................................2312184195.0021841955587653269274390030376746087377810100330
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAT..............................................................................................................................................2211247814.001247814134725450402633339528516287485129772
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTT............................................................................................................................................24195954.0095954219343905227460017455470722714
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGA...............................................................................................................................................21153527.005352714365210920792022054414112116
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATT.............................................................................................................................................22129569.0029569288973891574412790
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................23122023.002202347816153421723420631332606
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATC.............................................................................................................................................23114892.001489230995874453503430294
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTG................................................................................................................................................2018182.008182208322289403583206699
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATA.............................................................................................................................................2317730.0077302039316873915953450204
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGAT..............................................................................................................................................2117102.00710268972568321277
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTA............................................................................................................................................2415918.0059181915257101371948818842
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCT.................................................................................................................................................1914239.004239357891321692026144719
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATG.............................................................................................................................................2312606.0026061583068225320563
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAC..............................................................................................................................................2212456.00245674165323402224440
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGAC....................................................................................................................................................................................2212360.002360708447633754450358
..................................................................................................................................................CGGTTTTCGATTTGGTTTGACT...................................................................................................................................................................................2212047.00204763054940119184405120
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTT............................................................................................................................................2311119.0011191099701066
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACC...................................................................................................................................................................................2311073.00107351021020423
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAA..............................................................................................................................................221966.00966426667133251281
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGA.....................................................................................................................................................................................211929.00929500304001911671
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTC............................................................................................................................................241902.009024808419915312631
.........................................................................................................................................................................................AGATCATTTTGAAAGCTGATT.............................................................................................................................................211746.007465931066316220
.......................................................................................................................................................................................TGAGATCATTTTGAAAGC..................................................................................................................................................181691.00691104239367724616
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGA...............................................................................................................................................201660.006606431006100
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTG............................................................................................................................................241544.0054431561221006445
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTT...........................................................................................................................................251419.0041916311701081300
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGATT.............................................................................................................................................241352.00352297151217128
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGAT..............................................................................................................................................231328.0032810518224119546
.......................................................................................................................................................................................TGAGATCATTTTGAAA....................................................................................................................................................161323.00323000000323
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAAA.............................................................................................................................................231266.00266164103062225
.................................................................................................................................................CCGGTTTTCGATTTGGTTTG......................................................................................................................................................................................201239.00239122015243570
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAA............................................................................................................................................241213.002131381010301618
.........................................................................................................................................................................................AGATCATTTTGAAAGCTGAT..............................................................................................................................................201202.0020213951822270
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACTT..................................................................................................................................................................................241174.0017474520302241
..........................................................................................................................................................................................GATCATTTTGAAAGCTGATT.............................................................................................................................................201171.00171114181481214
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGAG..............................................................................................................................................221154.00154285124017520
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAAA..........................................................................................................................................261150.001501226007213
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGT...............................................................................................................................................211147.001474906068240
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTTTT..........................................................................................................................................261140.001405205044354
..................................................................................................................................................CGGTTTTCGATTTGGTTTGACC...................................................................................................................................................................................221119.00119111601010
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGG...............................................................................................................................................211118.001188065013140
..................................................................................................................................................CGGTTTTCGATTTGGTTTGAC....................................................................................................................................................................................211109.00109642419290
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATA.............................................................................................................................................221106.00106101000005
........................................................................................................................................................................................GAGATCATTTTGAAAGCTGATTA............................................................................................................................................231103.00103103000000
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATTAA...........................................................................................................................................251102.00102733002024
...........................................................................................................................................................................................ATCATTTTGAAAGCTGATT.............................................................................................................................................19292.50185501826444223
.............................................................................................................................................................................................CATTTTGAAAGCTGATT.............................................................................................................................................17287.50175000000175
...........................................................................................................................................................................................ATCATTTTGAAAGCTGAT..............................................................................................................................................18281.00162820395540
.................................................................................................................................................CCGGTTTTCGATTTGGTTT.......................................................................................................................................................................................19174.00743302315210
..........................................................................................................................................................................................GATCATTTTGAAAGCTGAT..............................................................................................................................................19166.00661890811200
........................................................................................................................................................................................GAGATCATTTTGAAAGCTG................................................................................................................................................19165.006565000000
.................................................................................................................................................CCGGTTTTCGATTTGGTTTGACA...................................................................................................................................................................................23161.00611300116301
......................................................................................................................................................................................GTGAGATCATTTTGAAAGCTGA...............................................................................................................................................22160.00601110113160
.......................................................................................................................................................................................TGAGATCATTTTGAAAGCTGATAAA...........................................................................................................................................25159.005950211410

Generated: 10/20/2015 at 11:46 PM