ID:

der_989

 Coordinate:

scaffold_4820:8618510-8618547 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-13.0 -12.8 -12.7

Flybase annnotation

intron [Dere\tRNA:GG25691-in]; exon [Dere\tRNA:GG25691:1]; exon [Dere\tRNA:GG25691:2]; tRNA [Dere\tRNA:GG25691-RA]

No Repeatable elements found

Sense Strand Reads

------------######################################--------------------------------------#############################################-----
CGCCCGCAACTCGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAGGCATTCAGTCTTGCCCTTCGCAGAAGGGCGTGCGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAGAATT
**************************************************((..((.((..((((((((...)))))))).)))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M055
female body
 V108
head
 V107
male body		 M057
embryo
 V060
head
 GSM1528801
follicle cells		 V040
embryo
..................................................................................................................TCGAATCCCACTTCTGACACCA.. 22 2 9 1983.89 17855 15220 1331 1132 72 78 0 22
.......................................................................................................AGGGCGTGGGTTCGAATCCCACTTCT......... 26 0 4 801.50 3206 198 2606 271 6 93 32 0
..................................................................................................................TCGTATCCCACTTCTGACACCA.. 22 3 9 562.78 5065 4353 529 128 19 32 0 4
.......................................................................................................AGGGCGTGGGTTCGTATCCCACTTCT......... 26 1 4 360.25 1441 105 1227 45 0 63 0 1
.......................................................................................................AGGGCGTGGGTTCGAATCCCACT............ 23 0 4 254.75 1019 30 755 201 1 29 0 3
..............................................................................................TCCTCTTTGAGGGCGTGGGT........................ 20 1 4 235.25 941 244 611 54 7 4 21 0
..................................................................................................................TCGGATCCCACTTCTGACACCA.. 22 3 9 210.44 1894 1538 238 106 4 8 0 0
.......................................................................................................AGGGCGTGGGTTCGTATCCCACT............ 23 1 4 165.25 661 23 539 80 0 19 0 0
............GTCAGGATGGCCGAGCGGTCTAAGGCC................................................................................................... 27 1 4 164.00 656 21 461 167 7 0 0 0
.......................................................................................................AGGGCGTGGGTTCGGATCCCACTTCT......... 26 1 4 144.25 577 38 500 13 0 26 0 0
.................................................................................................................TTCGAATCCCACTTCTGACACCA.. 23 2 8 110.38 883 268 466 122 0 24 2 1
............GTCAGGATGGCCGAGCGG............................................................................................................ 18 0 4 94.50 378 108 134 122 0 6 0 8
............GTCAGGATGGCCGAGCGGTCTAAGGC.................................................................................................... 26 0 4 90.00 360 53 193 97 14 2 0 1
............GTCAGGATGGCCGAGCGGTCTAAGG..................................................................................................... 25 0 4 85.75 343 85 182 44 10 10 0 12
................................................................................................................GTTCGAATCCCACTTCTGACACCA.. 24 2 8 76.88 615 559 26 20 5 5 0 0
.......................................................................................................AGGGCGTGGGTTCGGATCCCACT............ 23 1 4 67.50 270 12 228 26 0 4 0 0
..................................................................................................CTTTGAGGGCGTGGGTTCGAATCCCA.............. 26 1 4 57.00 228 45 87 79 10 4 0 3
.......................................................................................................AGGGCGTGGGTTCGAATCCCA.............. 21 0 6 51.17 307 20 135 129 5 6 0 12
................................................................................................................GTTCGAATCCCACTTCTGA....... 19 0 11 50.55 556 413 65 34 31 2 0 11
.................................................................................................................TTCGTATCCCACTTCTGACACCA.. 23 3 8 48.88 391 80 268 24 1 18 0 0
.......................................................................................................AGGGCGTGGGTTCGTATCCCA.............. 21 1 6 47.83 287 17 189 70 4 3 0 4
............GTCAGGATGGCCGAGCGGTC.......................................................................................................... 20 0 4 45.50 182 15 75 60 10 14 0 8
..................................................................................................................TCGCATCCCACTTCTGACACCA.. 22 3 9 41.78 376 329 41 5 0 0 0 1
............GTCAGGATGGCCGAGCGGTCTAAGGCCC.................................................................................................. 28 1 4 41.50 166 2 116 21 27 0 0 0
.................GATGGCCGAGCGGCTTAAGGCGCA................................................................................................. 24 3 4 39.75 159 7 26 126 0 0 0 0
..................................................................................................CTTTGAGGGCGTGGGTTCGTATCCCA.............. 26 2 4 39.00 156 35 86 25 9 0 0 1
............GTCAGGATGGCCGAGCGGTCTAAG...................................................................................................... 24 0 4 38.00 152 9 109 24 0 3 0 7
............GTCAGGATGGCCGAGCGGTCTAAGGCGC.................................................................................................. 28 0 4 30.25 121 5 83 24 8 1 0 0
.......................................................................................................AGGGCGTGGGTTCGAATCCC............... 20 0 6 29.67 178 26 55 91 4 1 0 1
................................................................................................................GTTCGTATCCCACTTCTGACACCA.. 24 3 8 27.13 217 193 16 3 3 2 0 0
..............................................................................................TCCTCTATGAGGGCGTGGGT........................ 20 1 4 26.25 105 29 71 5 0 0 0 0
................................................................................................CTCTTTGAGGGCGTGGGT........................ 18 1 5 26.00 130 24 64 39 0 3 0 0
....................................................ATTCAGTCTTGCCCTTCGCAGAAGGG............................................................ 26 0 1 25.00 25 2 15 4 3 0 0 1
........................................................................................TTCTGGTCCTCTCTGAGGGCGTGGGT........................ 26 0 4 24.25 97 2 3 1 0 0 91 0
................................................................................................................GTTCGTATCCCACTTCTGA....... 19 1 11 23.64 260 186 53 9 4 0 0 8
..............................................................................................TCCTCTCTGAGGGCGTGGGT........................ 20 0 4 22.50 90 10 73 7 0 0 0 0
...........................................................................................TGGTCCTCTTTGAGGGCGTGGGT........................ 23 1 4 22.50 90 11 69 8 0 2 0 0
............GTCAGGATGGCCGAGCGGT........................................................................................................... 19 0 4 20.75 83 11 37 15 1 9 0 10
..............................................................................................TCCTCTGTGAGGGCGTGGGT........................ 20 1 4 20.75 83 23 49 9 0 2 0 0
.......................................................................................................AGGGCGTGGGTTCGTATCCC............... 20 1 6 20.67 124 26 51 42 2 3 0 0
..................................................................................................CTTTGAGGGCGTGGGTTCGAATCCCAC............. 27 1 4 20.25 81 11 14 53 3 0 0 0
.......................................................................................................AGGGCGTTGGTTCGAATCCCACTTCT......... 26 1 4 19.50 78 0 78 0 0 0 0 0
.................................................................................................................TTCGGATCCCACTTCTGACACCA.. 23 3 8 19.38 155 33 104 12 0 6 0 0
.......................................................................................................AGGGCGTGGGTTCGGATCCCA.............. 21 1 6 19.17 115 2 77 28 4 2 0 2
..................................................................................................CTTTGAGGGCGTGGGTTCGGATCCCA.............. 26 2 4 19.00 76 17 36 19 4 0 0 0
.......................................................................................................AGGGCGTGGGTTCGAATCCCACTTC.......... 25 0 4 18.50 74 5 50 15 4 0 0 0
..........................................................................................CTGGTCCTCTTTGAGGGCGTGGGT........................ 24 1 4 18.50 74 4 5 2 0 0 63 0
................................................................................................CTCTTTGAGGGCGTGGGTTCGAATCCCA.............. 28 1 4 17.00 68 19 26 9 13 0 0 1
............GTCAGGATGGCCGAGCGGTCTA........................................................................................................ 22 0 4 16.00 64 1 29 27 0 3 0 4
....................................................ATTCAGTCTTGCCCTTCGCAGAAG.............................................................. 24 0 1 16.00 16 8 3 0 2 0 0 3
..................................................................................................................TCGAATCCCACTTCTGACACC... 21 2 12 15.50 186 169 9 5 3 0 0 0
....................................................ATTCAGTCTTGCCCTTCGCAGAAGGGC........................................................... 27 0 1 15.00 15 0 1 0 14 0 0 0
.....................................................................................................TGGGGTCGTGGGTTCGAATCCC............... 22 2 4 15.00 60 9 13 37 0 1 0 0
.......................................................................................................ATGGCGTGGGTTCGAATCCCACTTCT......... 26 1 4 15.00 60 2 57 0 1 0 0 0
.................GATGGCCGAGCGGCTTAAGGCGC.................................................................................................. 23 2 4 14.50 58 2 12 44 0 0 0 0
.......................................................................................................AGGGCGTGGGTTCGCATCCCACTTCT......... 26 1 4 14.25 57 4 49 2 0 2 0 0
...................................................................................................CTTGAGGGCGTGGGTTCGAATCCCA.............. 25 2 4 13.50 54 7 13 32 2 0 0 0
.................................................................................................TCTTTGAGGGCGTGGGTTCGAATCCCA.............. 27 1 4 13.25 53 7 14 29 3 0 0 0
................................................................................................CTCTTTGAGGGCGTGGGTTCGTATCCCA.............. 28 2 4 13.25 53 19 20 6 8 0 0 0
........................................................................................................GGTCGTGGGTTCGAATCCC............... 19 1 6 13.17 79 25 33 20 0 1 0 0
.............................................................................................................TGGGTTCGAATCCCACTTCTGACACCA.. 27 2 8 12.63 101 63 24 6 8 0 0 0
.................................................................CTTCGCAGAAGGGCGTGC....................................................... 18 0 1 12.00 12 1 11 0 0 0 0 0
......................................................................................................GAGGGCGTGGGTTCGAATCCCACTTCT......... 27 0 4 12.00 48 3 37 8 0 0 0 0
............GTCAGGATGGCCGAGCGGTCTAAGGCTC.................................................................................................. 28 1 4 12.00 48 1 32 15 0 0 0 0
...............................................................................................................GGTTCGAATCCCACTTCTGACACCA.. 25 2 8 12.00 96 89 0 2 4 1 0 0
.................................................................................................TCTTTGAGGGCGTGGGTTCGTATCCCA.............. 27 2 4 12.00 48 9 20 19 0 0 0 0
.......................................................................................................AGGGCGTGGGTTCGTATCCCACTTC.......... 25 1 4 11.75 47 4 39 3 1 0 0 0
.......................................................................................................AGGGCGTGGGTTCGAATCCAACTTCT......... 26 1 4 11.50 46 0 46 0 0 0 0 0
.................GATGGCCGAGCGGCTTAAGG..................................................................................................... 20 2 4 11.25 45 3 6 35 0 1 0 0
..................................................................................................................TCTAATCCCACTTCTGACACCA.. 22 3 9 11.11 100 76 13 10 0 1 0 0
.................................................................................................TCTTTGAGGGCGTGGGTT....................... 18 1 4 11.00 44 5 30 5 1 3 0 0
....................................................ATTCAGTCTTGCCCTTCGC................................................................... 19 0 1 11.00 11 2 5 1 3 0 0 0
............GTCAGGATGGCCGAGCGGTCT......................................................................................................... 21 0 4 11.00 44 3 18 21 0 2 0 0
.....................................................................................................TGGGGTCGTGGGTTCGAATCCCA.............. 23 2 4 11.00 44 25 9 10 0 0 0 0
............GTCAGGATGGCCGAGCGGCCAAGG...................................................................................................... 24 3 4 10.50 42 19 15 5 3 0 0 0
............GTCAGGATGGCCGAGCGGTCTAAGGCGCC................................................................................................. 29 0 4 10.50 42 0 16 6 20 0 0 0
................GGATGGCCGAGCGGTCTAAG...................................................................................................... 20 0 4 10.25 41 2 33 4 0 1 0 1
..............................................................................................TCCTCTTTGAGGGCGTGGGTT....................... 21 1 4 10.25 41 12 16 11 1 1 0 0
.......................................................................................................AGGGCGTGGGTTCGAATCC................ 19 0 6 10.00 60 8 16 36 0 0 0 0
...............AGGATGGCCGAGCGGTCTAAG...................................................................................................... 21 0 4 10.00 40 0 35 5 0 0 0 0
............GTCAGGATGGCCGAGCGGTCTAAGGCAC.................................................................................................. 28 1 4 10.00 40 0 29 11 0 0 0 0
..................................................................................................................TCGAATCCAACTTCTGACACCA.. 22 3 9 9.78 88 59 27 2 0 0 0 0
..............CAGGATGGCCGAGTGGTCTAAGGCTGC................................................................................................. 27 3 11 9.73 107 0 1 75 31 0 0 0
................................................................................................................GTTCGGATCCCACTTCTGACACCA.. 24 3 8 9.25 74 62 9 2 0 1 0 0
..................................................................................................................TCGAATACCACTTCTGACACCA.. 22 3 9 9.22 83 75 8 0 0 0 0 0
...................................................................TCGCAGAAGGGCGTGCGAGC................................................... 20 0 1 9.00 9 0 4 0 3 0 0 2
............GTCAGGATGGCCGAGCGGTCAAAG...................................................................................................... 24 1 4 9.00 36 1 33 2 0 0 0 0
..................................................................................................CTTTGAGGGCGTGGGTTCGAATCCC............... 25 1 4 8.75 35 3 12 16 3 0 0 1
............................................................................................GGTCCTCTTTGAGGGCGTGGGT........................ 22 1 4 8.75 35 16 14 4 0 1 0 0
.................GATGGCCGAGCGGTCTAAGG..................................................................................................... 20 0 4 8.50 34 4 20 3 0 1 0 6
..................................................................................................CTATGAGGGCGTGGGTTCGAATCCCA.............. 26 1 4 8.50 34 4 17 12 1 0 0 0
..............CAGGATGGCCGAGCGGTCTAAGGCCC.................................................................................................. 26 1 4 8.25 33 1 23 7 2 0 0 0
...................................................................................................CTTGAGGGCGTGGGTTCGTATCCCA.............. 25 3 4 8.25 33 4 15 13 1 0 0 0
.......................................................................................................AGGGCGTGGGTTCGGATCCC............... 20 1 6 8.17 49 12 16 16 1 4 0 0
..............................................................................................TCCCCTTTGAGGGCGTGGGT........................ 20 2 4 8.00 32 7 20 4 1 0 0 0
............GTCAGGATGGCCGAGCGGTCCAAG...................................................................................................... 24 1 4 8.00 32 1 25 6 0 0 0 0
....................................................ATTCAGTCTTGCCCTTCGCAGAAGG............................................................. 25 0 1 8.00 8 3 1 0 2 0 0 2
....................................................ATTCAGTCTTGCCCTTCGCAGAAGGGCGT......................................................... 29 0 1 8.00 8 0 4 4 0 0 0 0
................................................................................................................GTTCGGATCCCACTTCTGA....... 19 1 11 7.82 86 58 23 2 1 2 0 0
................................................................................................................GTTCGAATCCCACTTCTGACACCG.. 24 3 11 7.82 86 86 0 0 0 0 0 0
............GTCAGGATGGCCGAGCGGTCTAA....................................................................................................... 23 0 4 7.75 31 2 19 8 0 0 0 2
........................................................................................................GGGCGTGGGTTCGAATCCCACTTCT......... 25 0 4 7.75 31 27 3 1 0 0 0 0
........................................................................................TTCTGGTCCTCTCTGAGGGCGTGGG......................... 25 0 4 7.50 30 0 6 0 0 0 24 0
..............CAGGATGGCCGAGCGGTCTAAGGCC................................................................................................... 25 1 4 7.50 30 1 28 1 0 0 0 0
...............AGGATGGCCGAGCGGTCTAAGG..................................................................................................... 22 0 4 7.50 30 4 19 3 1 1 0 2
.......................................................................................................AGGGCGTTGGTTCGTATCCCACTTCT......... 26 2 4 7.25 29 0 29 0 0 0 0 0
..................ATGGCCGAGCGGCTTAAGGCGCA................................................................................................. 23 3 5 7.00 35 3 3 29 0 0 0 0
...............AGGATGGCCGAGCGGTCTAAGGC.................................................................................................... 23 0 4 7.00 28 2 19 4 0 1 0 2
.................................................................CTTCGCAGAAGGGCGTGCGAGC................................................... 22 0 1 7.00 7 0 1 1 4 0 0 1
...............................................................................GTGCGAGCGTTCTGGTCCT........................................ 19 0 1 7.00 7 0 3 2 0 0 0 2
................................................................................................CTCTTTGAGGGCGTGGGTTCGAATCCC............... 27 1 4 7.00 28 14 5 8 0 1 0 0
......................................................................................................GAGGGCGTGGGTTCGAATCCCA.............. 22 0 4 6.75 27 2 8 12 1 0 0 4
....................................................................................................TTGAGGGCGTGGGTTCGAATCCCA.............. 24 1 4 6.75 27 3 8 13 1 1 0 1
..............CAGGATGGCCGAGCGGTCTAAG...................................................................................................... 22 0 4 6.75 27 2 19 2 0 0 0 4
..............................................................................................................GGGTTCGAATCCCACTTCTGACACCA.. 26 2 8 6.75 54 49 0 1 4 0 0 0
.................GATGGCCGAGCGGTCTAAG...................................................................................................... 19 0 4 6.75 27 1 20 4 0 2 0 0
.......................................................................................................AGGGCGTGGGTTCGAATC................. 18 0 6 6.67 40 7 8 24 0 1 0 0
..................................................................................................................TCGAATCCCACTTCTGACAC.... 20 1 11 6.55 72 51 8 9 4 0 0 0
..............................................................................................TCCTCTTTGAGGGCGTGGG......................... 19 1 4 6.50 26 26 0 0 0 0 0 0
...............AGGATGGCCGAGCGGTCTAAGGCC................................................................................................... 24 1 4 6.50 26 3 21 2 0 0 0 0
.......................................................................................................AGGGCGTTGGTTCGAATCCCACT............ 23 1 4 6.50 26 0 25 1 0 0 0 0
.......................................................................................................ATGGCGTGGGTTCGTATCCCACTTCT......... 26 2 4 6.50 26 0 24 2 0 0 0 0
.......................................................................................................AGTGCGTGGGTTCGAATCCCACTTCT......... 26 1 4 6.50 26 2 23 1 0 0 0 0
.....................................................................................................TGGGGTCGTGGGTTCGAATCC................ 21 2 5 6.40 32 1 4 27 0 0 0 0
.................................................................................................TCTTTGAGGGCGTGGGTTCGAATCCCAC............. 28 1 4 6.25 25 3 6 13 3 0 0 0
..................................................................................................CTATGAGGGCGTGGGTTCGTATCCCA.............. 26 2 4 6.25 25 3 17 5 0 0 0 0
...............AGGATGGCCGAGTGGTCTAAGGCTGC................................................................................................. 26 3 11 6.18 68 2 45 21 0 0 0 0
.......................................................................................................AGGGCGTGGGTTCGAATCCCACTTCTG........ 27 0 4 6.00 24 12 8 3 0 1 0 0
.......................................................................................................AGGGCGTGGGTTCGCATCCCACT............ 23 1 4 6.00 24 1 19 4 0 0 0 0
......................................................................................................GAGGGCGTGGGTTCGTATCCCACTTCT......... 27 1 4 6.00 24 0 23 1 0 0 0 0
...................................................................................................TTTGAGGGCGTGGGTTCGAATCCCA.............. 25 1 4 6.00 24 5 3 13 2 0 0 1
.......................................................................................................AGGGCGTGGGTTCGAATCCCACTT........... 24 0 4 5.75 23 4 13 6 0 0 0 0
........................................................................................................GGGCGTGGGTTCGAATCCCACT............ 22 0 4 5.75 23 16 6 0 1 0 0 0
.......................................................................................................AGGGCGTGGGTTCGTATCCAACTTCT......... 26 2 4 5.75 23 0 23 0 0 0 0 0
........................................................................................TTCTGGTCCTCTCTGAGGGCGTGG.......................... 24 0 4 5.75 23 7 1 0 0 0 15 0
................GGATGGCCGAGCGGTCTAAGG..................................................................................................... 21 0 4 5.75 23 5 12 4 0 1 0 1
.......................................................................................................GGGTCGTGGGTTCGAATCCC............... 20 2 20 5.65 113 34 18 59 0 2 0 0
................................................................................................................GTTCGAATCCCACTTCTG........ 18 0 11 5.64 62 51 5 1 1 0 0 4
.............................................................................................................TGGGTTCGTATCCCACTTCTGACACCA.. 27 3 8 5.63 45 30 7 5 3 0 0 0
..................................................................................................................TGGAATCCCACTTCTGACACCA.. 22 3 9 5.56 50 45 1 1 3 0 0 0
..................................................................................................CTGTGAGGGCGTGGGTTCGAATCCCA.............. 26 1 4 5.50 22 5 5 11 1 0 0 0
..................................................................................................CTTTGAGGGCGTGGGTTCGTATCCCAC............. 27 2 4 5.50 22 3 7 11 1 0 0 0
..............CAGGATGGCCGAGCGGTCTAAGGC.................................................................................................... 24 0 4 5.50 22 6 8 1 5 0 0 2
.......................................................................................................AGGGCGTGGGTTCGAATCACACTTCT......... 26 1 4 5.50 22 0 22 0 0 0 0 0
..................................................................................................................TCGAATCCCAATTCTGACACCA.. 22 3 9 5.44 49 42 5 2 0 0 0 0
...........................................................................................................CGTGGGTTCGAATCCCACTTCTGACACCA.. 29 2 8 5.38 43 7 20 8 1 0 7 0
................................................................................................CTCTGTGAGGGCGTGGGT........................ 18 1 4 5.25 21 7 10 4 0 0 0 0
.......................................................................................................AGGGAGTGGGTTCGAATCCCACTTCT......... 26 1 4 5.25 21 0 20 1 0 0 0 0
.......................................................................................................AGGGCGTGGGTTCGGATCCCACTTC.......... 25 1 4 5.25 21 1 16 1 2 0 0 1
.......................................................................................................ATGGCGTGGGTTCGAATCCCACT............ 23 1 4 5.25 21 1 17 2 1 0 0 0
............GTCAGGATGGCCGAGCGGG........................................................................................................... 19 1 4 5.25 21 10 0 10 0 0 0 1
...................................................................................................CTTGAGGGCGTGGGTTCGAATCCCAC............. 26 2 4 5.25 21 1 1 17 2 0 0 0
..............CAGGATGGCCGAGCGGTCTAAGG..................................................................................................... 23 0 4 5.25 21 4 13 1 1 1 0 1
..................................................................................................................TCGAATCACACTTCTGACACCA.. 22 3 9 5.22 47 34 11 2 0 0 0 0
........................................................................................................GGGCGTGGGTTCGAATCCC............... 19 0 6 5.00 30 19 7 2 2 0 0 0
....................GGCCGAGCGGCTTAAGGCGCA................................................................................................. 21 3 19 5.00 95 10 11 74 0 0 0 0
.......................................................................................................AGGGCGTGTGTTCGAATCCCACTTCT......... 26 1 4 5.00 20 0 20 0 0 0 0 0
.......AACTCGTCAGGATGGCCGAGCGGTC.......................................................................................................... 25 0 1 5.00 5 1 0 0 0 0 4 0
............................................................................................GGTCCTCTCTGAGGGCGTGGGT........................ 22 0 4 5.00 20 0 11 7 1 0 0 1
......................CCGAGCGGTCTAAGGCGCCAGAC............................................................................................. 23 0 4 5.00 20 0 0 0 0 0 20 0
.......................................................................................................AGGGCGTGGGTTAGAATCCCACTTCT......... 26 1 4 5.00 20 0 19 1 0 0 0 0
..................................................................................................CTTTGAGGGCGTGGGTTCGTATCCC............... 25 2 4 5.00 20 6 7 4 3 0 0 0
..................................................................................................................TCGAATCCCACTTCTGAAACCA.. 22 3 9 4.89 44 43 1 0 0 0 0 0
......................................................................................................GAGGGCGTGGGTTCGTATCCCA.............. 22 1 4 4.75 19 1 9 6 0 1 0 2
..................................................................................................................TCAAATCCCACTTCTGACACCA.. 22 3 9 4.67 42 36 3 3 0 0 0 0
........................................................................................................GGTCGTGGGTTCGAATCCCA.............. 20 1 6 4.67 28 14 6 7 1 0 0 0
..................ATGGCCGAGCGGCTTAAGGCGC.................................................................................................. 22 2 4 4.50 18 0 3 15 0 0 0 0
.......................................................................................................AGGGCGTGGGTTCGAATCCCACGTCT......... 26 1 4 4.50 18 0 18 0 0 0 0 0
.......................................................................................................AGGGCGTTGGTTCGTATCCCACT............ 23 2 4 4.50 18 0 18 0 0 0 0 0
........................................................................................................GGTCGTGGGTTCGAATCC................ 18 1 6 4.50 27 10 11 6 0 0 0 0
.......................................................................................................AGGGCGTGGGTTCGAATCCCACCTCT......... 26 1 6 4.33 26 0 26 0 0 0 0 0
........................................................................................................GGGCGTGGGTTCGTATCCC............... 19 1 6 4.33 26 24 1 1 0 0 0 0
....................................................................................................TTGAGGGCGTGGGTTCGAATCCCAC............. 25 1 4 4.25 17 1 4 11 1 0 0 0
.................GATGGCCGAGCGGTCTAAGGC.................................................................................................... 21 0 4 4.25 17 1 9 1 2 2 0 2
............GTCAGGATGGCCGAGCGGCCAAG....................................................................................................... 23 3 4 4.25 17 4 9 4 0 0 0 0
...........................................................................................TGGTCCTCTCTGAGGGCGTGGGT........................ 23 0 4 4.25 17 2 13 0 0 2 0 0
................................................................................................CTCTTTGAGGGCGTGGGTTCGTATCCC............... 27 2 4 4.25 17 8 5 3 1 0 0 0
...............AGGATGGCCGAGCGGTCTAAGGCTCCA................................................................................................ 27 1 4 4.25 17 2 14 1 0 0 0 0
..................................................................................................CTTTGAGGGCGTGGGTTCGAATCCCACT............ 28 1 4 4.25 17 1 10 5 1 0 0 0
..............................................................................................TCCTCTTTGAGGGCGTGG.......................... 18 1 4 4.25 17 16 0 0 0 1 0 0
.......................................................................................GTTCTGGTCCTCTTTGAGG................................ 19 1 4 4.25 17 7 1 0 9 0 0 0
...............................................................................................................GGTTCGTATCCCACTTCTGACACCA.. 25 3 8 4.25 34 33 1 0 0 0 0 0
.........................................................GTCTTGCCCTTCGCAGAAGGGCGT......................................................... 24 0 1 4.00 4 0 3 0 0 1 0 0
..................................................................................................CTGTGAGGGCGTGGGTTCGTATCCCA.............. 26 2 4 4.00 16 2 9 4 0 1 0 0
......................................................................................................GAGGGCGTGGGTTCGAATCCCACT............ 24 0 4 4.00 16 1 6 8 1 0 0 0
......................................................................................................................ATCCCACTTCTGACACCATT 20 2 2 4.00 8 6 2 0 0 0 0 0
.......................................................................................................AGGGCGTGGGTTCGAATCCCACTTCTGA....... 28 0 4 4.00 16 10 1 4 1 0 0 0
...............AGGATGGCCGAGCGG............................................................................................................ 15 0 4 4.00 16 0 0 0 0 0 16 0
..................................................................TTCGCAGAAGGGCGTGCGAGC................................................... 21 0 1 4.00 4 0 0 0 3 1 0 0
.............................................................................................GTCCTCTTTGAGGGCGTGGGT........................ 21 1 4 4.00 16 12 3 0 1 0 0 0
.......................................................................................................ATGGCGTGGGTTCGTATCCCACT............ 23 2 4 4.00 16 0 16 0 0 0 0 0
...................................................................................................................CGAATCCCACTTCTGACAGCA.. 21 1 1 4.00 4 3 1 0 0 0 0 0
....................................................................................................TTGAGGGCGTGGGTTCGAATCCC............... 23 1 4 4.00 16 2 1 12 1 0 0 0
.................................................................................................TCTTTGAGGGCGTGGGTTCGAATCCC............... 26 1 4 4.00 16 4 1 9 2 0 0 0
.................GATGGCCGAGCGGCTTAAG...................................................................................................... 19 2 4 4.00 16 3 5 8 0 0 0 0
....................................................ATTCAGTCTTGCCCTTCGCA.................................................................. 20 0 1 4.00 4 0 0 0 1 0 0 3
...............................................................................................................GGTTCGAATCCCACTTCTGA....... 20 0 11 3.82 42 42 0 0 0 0 0 0
.......................................................................................GTTCTGGTCCTCTCTGAGGGCGTGGGT........................ 27 0 4 3.75 15 0 4 2 0 1 8 0
.......................................................................................................AGGGCGTGGGTTCTAATCCCACTTCT......... 26 1 4 3.75 15 0 14 1 0 0 0 0
.......................................................................................................AGGGCGTGGGTTAGTATCCCACTTCT......... 26 2 4 3.75 15 0 15 0 0 0 0 0
.....................................................................................................TGAGGGCGTGGGTTCGAATCCCACTTCT......... 28 0 4 3.75 15 0 13 2 0 0 0 0
..................................................................................................................TCGAATCCCACTTCTTACACCA.. 22 3 9 3.67 33 20 10 3 0 0 0 0
....................................................................................................TTGGGGTCGTGGGTTCGAATCCC............... 23 3 9 3.67 33 3 3 26 0 1 0 0
.................................................................................................................TTCGAATCCCACTTCTGA....... 18 0 11 3.64 40 36 2 2 0 0 0 0
......................................................................................................GGGGTCGTGGGTTCGAATCCCA.............. 22 2 9 3.56 32 28 1 3 0 0 0 0
..............................................................................................................GGGTTCGAATCCCACTTCTGA....... 21 0 11 3.55 39 37 0 0 2 0 0 0
....................................................................................................TTGAGGGCGTGGGTTCGTATCCCA.............. 24 2 4 3.50 14 2 3 7 1 1 0 0
..................ATGGCCGAGCGGCTTAAGGC.................................................................................................... 20 2 4 3.50 14 0 3 11 0 0 0 0
.......................................................................................................AGGGCGTGGGTTCGAATCCCACATCT......... 26 1 4 3.50 14 0 13 1 0 0 0 0
....................................................................................AGCGTTCTGGTCCTCTCTG................................... 19 0 4 3.50 14 6 3 0 0 0 0 5
.............................................................................................................TGGGTTCGGATCCCACTTCTGACACCA.. 27 3 8 3.50 28 22 4 0 2 0 0 0
............GTCAGGATGGCCGAGCGT............................................................................................................ 18 1 4 3.50 14 9 1 4 0 0 0 0
.......................................................................................................AGGGCTTGGGTTCGAATCCCACTTCT......... 26 1 4 3.50 14 5 7 1 0 1 0 0
...................................................................................................CTTGAGGGCGTGGGTTCGGATCCCA.............. 25 3 4 3.50 14 3 9 1 1 0 0 0
.......................................................................................................AGTGCGTGGGTTCGTATCCCACTTCT......... 26 2 4 3.50 14 2 12 0 0 0 0 0
.......................................................................................................AGGGCGTGGGTTCGAATCCCACTTAT......... 26 1 4 3.50 14 0 14 0 0 0 0 0
...................................................................................................TTTGAGGGCGTGGGTTCGAATCCCAC............. 26 1 4 3.50 14 3 1 9 1 0 0 0
................................................................................................CTCTTTGAGGGCGTGGGTTCGGATCCCA.............. 28 2 4 3.50 14 3 8 1 2 0 0 0
.......................................................................................................AGGTCGTGGGTTCGAATCCCACTTCT......... 26 1 4 3.50 14 0 14 0 0 0 0 0
.......................CGAGCGGTCTAAGGCTCCA................................................................................................ 19 1 7 3.43 24 2 8 14 0 0 0 0
..............................................................................................TCCTCTTTGATGGCGTGGGT........................ 20 2 5 3.40 17 0 17 0 0 0 0 0
..........................................................................................................GCGTGGGTTCGAATCCCACTTCTGA....... 25 0 11 3.27 36 36 0 0 0 0 0 0
.....................................................................................................TGAGGGCGTGGGTTCGTATCCCA.............. 23 1 4 3.25 13 1 5 6 0 0 0 1
..................ATGGCCGAGCGGTCTAAGG..................................................................................................... 19 0 4 3.25 13 2 6 4 1 0 0 0
.......................................................................................................AGGGCGTGGGTTCGGATCCAACTTCT......... 26 2 4 3.25 13 0 13 0 0 0 0 0
..................................................................................................CTATGAGGGCGTGGGTTCGAATCCCAC............. 27 1 4 3.25 13 0 3 8 2 0 0 0
.................................................................................................TCTTTGAGGGCGTGGGTTCGTATCCC............... 26 2 4 3.25 13 7 1 1 4 0 0 0
......................................................................................AGTTCTGGTCCTCTTTGAGGGCGTGGGT........................ 28 2 4 3.25 13 0 6 4 1 2 0 0
.......................................................................................................AGGGCGTGGGTTCGAATACCACTTCT......... 26 1 4 3.25 13 0 13 0 0 0 0 0
...................................................................................................................CGAATCCCACTTCTGACACAA.. 21 1 4 3.25 13 1 12 0 0 0 0 0
................................................................................................CTCTATGAGGGCGTGGGT........................ 18 1 4 3.25 13 2 8 2 0 0 0 1
................................................................................................................GTTCGTATCCCACTTCTG........ 18 1 11 3.18 35 30 2 1 2 0 0 0
........................................................................................................GGTCGTGGGTTCGAATCCCGCCT........... 23 3 6 3.17 19 18 0 1 0 0 0 0
.......................................................................................................AGGGCGTGGGTTCGTATCCCACTTCTG........ 27 1 4 3.00 12 7 3 1 0 1 0 0
..............................................................................CGTGCGAGCGTTCTGGTCCT........................................ 20 0 1 3.00 3 0 1 0 0 0 0 2
.......................................................................................................AGGGCGTGGTTTCGAATCCCACTTCT......... 26 1 4 3.00 12 2 9 1 0 0 0 0
....................................................AGTCAGTCTTGCCCTTCGCAGAAGGGC........................................................... 27 1 1 3.00 3 0 0 0 3 0 0 0
......................................................................................AGTTCTGGTCCTCTTTGAGG................................ 20 2 4 3.00 12 11 1 0 0 0 0 0
...............................................................................GTGCGAGCGTTCTGGTCC......................................... 18 0 1 3.00 3 0 2 0 1 0 0 0
...............................CTAAGGCGCCAGACTCAAGGC...................................................................................... 21 0 1 3.00 3 0 0 0 2 0 0 1
........................................................AGTCTTGCCCTTCGCAGAAGG............................................................. 21 0 1 3.00 3 0 0 0 0 0 0 3
....................................................ATTCAGTCTTGCCCTTCGCAGAAGGGCG.......................................................... 28 0 1 3.00 3 0 2 1 0 0 0 0
.......................................................................................................AGGGCGTTGGTTCGGATCCCACTTCT......... 26 2 4 3.00 12 0 12 0 0 0 0 0
.................GATGGCCGAGCGGCTTAAGGC.................................................................................................... 21 2 4 3.00 12 4 7 1 0 0 0 0
.........CTCGTCAGGATGGCCGAGC.............................................................................................................. 19 0 1 3.00 3 0 1 2 0 0 0 0
...............AGGATGGCCGAGCGGTCTAAGGCCCA................................................................................................. 26 2 4 3.00 12 1 11 0 0 0 0 0
..................................................................................................................TCGAATCCCACTTCTGACAGCA.. 22 1 1 3.00 3 3 0 0 0 0 0 0
.................................................................CTTCGCAGAAGGGCGTGCGA..................................................... 20 0 1 3.00 3 0 2 1 0 0 0 0
.......................................................................................................AGGGCGTGGGTTCGTATCACACTTCT......... 26 2 4 3.00 12 0 11 0 0 1 0 0
.................................................................................................................TTCGCATCCCACTTCTGACACCA.. 23 3 8 3.00 24 4 17 3 0 0 0 0
............GTCAGGATGGCCGAGCGGTCTAAGGCCCC................................................................................................. 29 1 4 3.00 12 0 8 3 1 0 0 0
.....................................................TTCAGTCTTGCCCTTCGCAGAAGGGCGT......................................................... 28 0 1 3.00 3 0 3 0 0 0 0 0
...................................................................................................TTTGAGGGCGTGGGTTCGTATCCCA.............. 25 2 4 3.00 12 5 0 5 2 0 0 0
......................................................TCAGTCTTGCCCTTCGCAGAAGGGC........................................................... 25 0 1 3.00 3 0 1 0 2 0 0 0
.........................................AGACTCAAGGCATTCAGT............................................................................... 18 0 1 3.00 3 0 2 0 0 0 0 1
.......................................................................................................GGGTCGTGGGTTCGAATCCCA.............. 21 2 20 2.90 58 45 4 9 0 0 0 0
..................................................................................................................TTGAATCCCACTTCTGACACCA.. 22 3 9 2.89 26 23 3 0 0 0 0 0
.......................................................................................................AGGGCGTGGGTTCGAATCCCAC............. 22 0 6 2.83 17 0 8 8 0 0 0 1
.....................................................................................................................AATCCCACTTCTGACACAA.. 19 1 4 2.75 11 1 10 0 0 0 0 0
............GTCAGGATGGCCGAGCGGTCCAAGG..................................................................................................... 25 1 4 2.75 11 4 3 4 0 0 0 0
................................................................................................CTCTTTGAGGGCGTGGGTTCGGATCCC............... 27 2 4 2.75 11 7 3 1 0 0 0 0
...............AGGATGGCCGAGCGGTCTAAGGCCC.................................................................................................. 25 1 4 2.75 11 1 9 1 0 0 0 0
..................................................................................................TCTTGAGGGCGTGGGTTCGAATCCCA.............. 26 3 4 2.75 11 0 3 8 0 0 0 0
............GTCAGGATGGCCGAGCGGTCTAAGGCTCC................................................................................................. 29 1 4 2.75 11 0 7 2 2 0 0 0
..................................................................................................CTGTGAGGGCGTGGGTTCGAATCCCAC............. 27 1 4 2.75 11 0 1 8 2 0 0 0
....................................................................................................CTGAGGGCGTGGGTTCGAATCCCA.............. 24 0 4 2.75 11 0 4 4 0 1 0 2
.......................................................................................................AGGGCGTGGGCTCGAATCCCACTTCT......... 26 1 4 2.75 11 1 9 0 0 1 0 0
.............TCAGGATGGCCGAGCGGTCTAAGGC.................................................................................................... 25 0 4 2.75 11 10 1 0 0 0 0 0
....................................................................................................TTGAGGGCGTGGGTTCGAATCCCACT............ 26 1 4 2.75 11 0 5 5 1 0 0 0
.......................................................................................................AGGGCGTGGGTTCGTATCC................ 19 1 6 2.67 16 2 8 5 0 1 0 0
.......................CGAGCGGTCTAAGGCCCA................................................................................................. 18 2 17 2.65 45 2 15 28 0 0 0 0
.....................................................................................................TGGGGTCGTGGGTTCGAATC................. 20 2 5 2.60 13 0 0 13 0 0 0 0
...........................................................................................TGGTCCTCTGTGAGGGCGTGGGT........................ 23 1 4 2.50 10 2 8 0 0 0 0 0
......................................................................................AGTTCTGGTCCTCTTTGAG................................. 19 2 4 2.50 10 1 9 0 0 0 0 0
.......................................................................................................AGGGCGTGTGTTCGTATCCCACTTCT......... 26 2 4 2.50 10 0 10 0 0 0 0 0
.......................................................................................ATTCTGGTCCTCTCTGAGGGCGTGGGT........................ 27 1 4 2.50 10 0 0 0 0 0 10 0
...............AGGATGGCCGAGCGGTCT......................................................................................................... 18 0 4 2.50 10 0 10 0 0 0 0 0
......................................................................................AGTTCTGGTCCTCTTTGAGGGCGTGG.......................... 26 2 4 2.50 10 7 0 3 0 0 0 0
.................................................................................................TCTATGAGGGCGTGGGTTCGAATCCCA.............. 27 1 4 2.50 10 0 2 8 0 0 0 0
................................................................................................CTCTTTGAGGGCGTGGGTTCGAATC................. 25 1 4 2.50 10 4 1 4 1 0 0 0
........................................................................................................GGGCGTGGGTTCGAATCCCA.............. 20 0 6 2.50 15 11 2 0 1 0 0 1
..........................................................................................CTGGTCCTCTTTGAGGGCGTGG.......................... 22 1 4 2.50 10 6 3 1 0 0 0 0
.....................................................................................................TGAGGGCGTGGGTTCGAATCCC............... 22 0 4 2.50 10 2 0 8 0 0 0 0
....................................................................................................TTGAGGGCGTGGGTTCGAATCCCACTTCT......... 29 1 4 2.50 10 0 8 2 0 0 0 0
..................................................................................................................TCGAATCCCACTTCTGACACAA.. 22 1 4 2.50 10 2 5 2 0 1 0 0
.........................................................................................TCTGGTCCTCTTTGAGGGCGTGGGT........................ 25 1 4 2.50 10 2 2 2 0 0 4 0
...................................................................................................CTTGAGGGCGTGGGTTCGAATCCC............... 24 2 4 2.50 10 1 3 6 0 0 0 0
........................................................................................................GGGCGTGGGTTCGTATCCCACT............ 22 1 4 2.50 10 5 4 0 0 1 0 0
.......................................................................................................ATGGCGTGGGTTCGGATCCCACTTCT......... 26 2 4 2.50 10 0 10 0 0 0 0 0
.................................................................................................TCTTTGAGGGCGTGGGTTCGTATCCCAC............. 28 2 4 2.50 10 1 6 3 0 0 0 0
.................................................................................................TCTTTGAGGGCGTGGGTTCGGATCCCA.............. 27 2 4 2.50 10 1 6 3 0 0 0 0
..................................................................................................CTTTGAGGGCGTGGGTTCGTATCCCACT............ 28 2 4 2.50 10 0 7 2 1 0 0 0
..........................................................................................................GCGTGGGTTCGTATCCCACTTCTGA....... 25 1 11 2.36 26 26 0 0 0 0 0 0
..................................................................................................................TCGTATCCCACTTCTGACACC... 21 3 14 2.36 33 31 1 1 0 0 0 0
......................................................................................................GGGGTCGTGGGTTCGAATCCC............... 21 2 9 2.33 21 12 2 7 0 0 0 0
....................................................................................................TTGGGGTCGTGGGTTCGAATCCCA.............. 24 3 9 2.33 21 7 4 10 0 0 0 0
................................................................................................................GTTCGAATCCCACTTCTGAC...... 20 0 11 2.27 25 18 0 2 5 0 0 0
.................................................................................................TCTGTGAGGGCGTGGGTTCGTATCCCA.............. 27 2 4 2.25 9 1 2 6 0 0 0 0
............................................................................................GGTCCTCTTTGAGGGCGTGG.......................... 20 1 4 2.25 9 9 0 0 0 0 0 0
....................GGCCGAGCGGCTTAAGGCGC.................................................................................................. 20 2 16 2.25 36 1 9 25 0 1 0 0
................................................................................................CTCTATGAGGGCGTGGGTTCGAATCCCA.............. 28 1 4 2.25 9 3 3 1 2 0 0 0

Anti-sense strand reads

GCGGGCGTTGAGCAGTCCTACCGGCTCGCCAGATTCCGCGGTCTGAGTTCCGTAAGTCAGAACGGGAAGCGTCTTCCCGCACGCTCGCAAGACCAGGAGAGACTCCCGCACCCAAGCTTAGGGTGAAGACTGTCTTAA
**************************************************((..((.((..((((((((...)))))))).)))))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total V108
head
 V107
male body
.......................................GGTCTGAGTTCCGTAAGTC................................................................................ 19 0 1 1.00 1 0 1
...GGCGTTGAGCAGTCCTACCGGC................................................................................................................. 22 0 1 1.00 1 1 0
...............................................................................................................CCAAGCTTAGGGTGAAGACTG...... 21 0 11 0.09 1 1 0
.............................................................................CGCACGCTCGCAGCTCCAG.......................................... 19 3 13 0.08 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4820:8618460-8618597 + der_989 CGC--CCGCAACT-----CGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-GCAT--TCAG-TCTTGCCCTTCG-CA---GAAGGGC-----GTGCGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAGA--AT--------T
droYak3 3R:20320466-20320611 - dya_1096 CGC--CCGCAACG-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-GCAT--TCAG-TCTTGCCCTTCG-CA---GAAGGGC-----GTGCGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--AACTTTTTTTT
droSec2 scaffold_0:19784761-19784898 - dse_570 GGC--CCGCAACA-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-GCAT--TCGG-TCTTGCCCTTCG-CA---GAAGGGC-----GTGTGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--AT--------T
droSim2 3r:18977614-18977751 - GGC--CCGCAACA-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-GCAT--TCAG-TCTTGCCCTTCG-CA---GAAGGGC-----GTGTGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--AT--------T
dm3 chr3R:19427050-19427189 - CAT--TCGTAACA-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-GCAT--TCAG-TCTTGCCCTTCG-CA---GAAGGGCG---TGTACGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--TT--------T
droEug1 scf7180000409798:978848-978988 + CGC--TCTCAACA-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-GCAT--TCAG-CTTTGCCCTTCT-CA---GAAGGGCG---T-TGTGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAAGTAT--------T
droBia1 scf7180000302075:4963345-4963480 - AGC--TCGCAACG-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-A--T--ACAA-TCTTGCCCTTCT-CA---GGAGGGC-----GTGGGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--GA--------T
droTak1 scf7180000415765:1514058-1514195 + CGC--TCGCAACG-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-GCAT--TCAG-TCTTGCCCTTCA-CA---GAAGGGC-----GTGCGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--GT--------T
droEle1 scf7180000491261:142195-142332 + CGA--TTGCAACG-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-GCAT--TCTG-CTTTGCCCTTCG-CA---GAAGGGC-----GTGCGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--AT--------C
droRho1 scf7180000777784:76365-76502 + TGA--TTGCAACG-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-GCAT--TCAG-CTTTGCCCTTCG-CA---GAAGGGT-----GTGTGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--AT--------C
droFic1 scf7180000454039:128006-128147 + -GC--CCGCAAAAATAACTGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-ATCT--GAAA-TCTTGCTTTCCG-AA---GGAAAGT-----GTATGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAG--AA--------C
droKik1 scf7180000302639:3156585-3156725 + CGC--TCGCAACG-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-GCGA--ACTG-TCTTGCCCTTCT-CA---GAAGGGCGG--TGTGCGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--GC--------T
droAna3 scaffold_13340:20109767-20109906 + dan_3185 CGT--TCGCAACA-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-GCAA--AATG-TCTTGCCCTTCG-CA---GAAGGGTT---TGTGCGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--TA--------T
droBip1 scf7180000396413:2287341-2287480 - CGT--TCGCAACA-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-GCAA--AATG-TCTTACCCTTCG-CA---GAAGGGTG---TGTGCGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--TA--------T
dp5 2:2919266-2919410 - dps_320 GAT--TTGCAACG-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-ATATCAACAG-TCTTGCCCTTCC-CA---GAAGGGTCGTTTGTATGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--TC--------A
droPer2 scaffold_7:1430198-1430342 + dpe_2016 GAT--TTGCAACG-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-ATATCAACAG-TCTTGCCCTTCC-CA---GAAGGGTCGTTTGTATGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--TC--------A
droWil2 scf2_1100000004943:5473941-5474081 - dwi_3280 AACCATCGCAACA-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-ATGA--TAAG-TCTTGCCTTTCA-TA---GAAAGGTG----GTATGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--AT--------T
droVir3 scaffold_13049:12609315-12609454 + dvi_19686 GGT--TTGCCACG-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAGAGCAT--TTAACTCTTGCCTTTCA-TA---GAAAGGT-----GTGTGAGAATTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--AT--------A
droMoj3 scaffold_6680:14838368-14838508 - dmo_2494 CGC--TCGCAACA-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAGAGCA---AAAC-TCTTGCC-TTCGTAA---CGAGGGTTG--TGTATGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAG--AA--------C
droGri2 scaffold_15112:3937695-3937836 + CGC--TAGCAA-G-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-GTTTA-AAAA-TCTTGCCTCTCTCAAGCAGAGGTTC-----GTACGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--TA--------T

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
CGC--CCGCAACT-----CGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-GCAT--TCAG-TCTTGCCCTTCG-CA---GAAGGGC-----GTGCGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAGA--AT--------TSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCT...................264801.5032061986930271260632
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACT......................234254.7510193012932017550
...................GTCAGGATGGCCGAGCGGTCTAAGGCC..........................................................................................................................274164.00656217001674610
...................GTCAGGATGGCCGAGCGG...................................................................................................................................18494.503781080681221340
...................GTCAGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................26490.00360531421971930
...................GTCAGGATGGCCGAGCGGTCTAAGG............................................................................................................................25485.7534385101012441820
...........................................................................................................................AGGGCGTGGGTTCGAATCCCA........................21651.173072056121291350
....................................................................................................................................GTTCGAATCCCACTTCTGA.................191150.555564133121134650
...................GTCAGGATGGCCGAGCGGTC.................................................................................................................................20445.50182151014860750
...................GTCAGGATGGCCGAGCGGTCTAAG.............................................................................................................................24438.001529037241090
...................GTCAGGATGGCCGAGCGGTCTAAGGCGC.........................................................................................................................28430.25121581024830
...........................................................................................................................AGGGCGTGGGTTCGAATCCC.........................20629.671782641191550
............................................................AT--TCAG-TCTTGCCCTTCG-CA---GAAGGG...........................................................................26125.002523014150
............................................................................................................TTCTGGTCCTCTCTGAGGGCGTGGGT..................................26424.259720001391
..................................................................................................................TCCTCTCTGAGGGCGTGGGT..................................20422.5090100007730
...................GTCAGGATGGCCGAGCGGT..................................................................................................................................19420.758311191015370
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTC....................25418.5074540015500
...................GTCAGGATGGCCGAGCGGTCTA...............................................................................................................................22416.0064103427290
............................................................AT--TCAG-TCTTGCCCTTCG-CA---GAAG.............................................................................24116.00168203030
......................................................................................................................................TCGAATCCCACTTCTGACACC--...........211215.50186169300590
............................................................AT--TCAG-TCTTGCCCTTCG-CA---GAAGGGC-----.....................................................................27115.001501400010
............................................................................CTTCG-CA---GAAGGGC-----GTGC.................................................................18112.001210000110
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCACTTCT...................27412.004830008370
............................................................AT--TCAG-TCTTGCCCTTCG-C.....................................................................................19111.00112300150
...................GTCAGGATGGCCGAGCGGTCT................................................................................................................................21411.0044302021180
...................GTCAGGATGGCCGAGCGGTCTAAGGCGCC........................................................................................................................29410.5042020006160
.......................GGATGGCCGAGCGGTCTAAG.............................................................................................................................20410.254120114330
...........................................................................................................................AGGGCGTGGGTTCGAATCC..........................19610.0060800036160
......................AGGATGGCCGAGCGGTCTAAG.............................................................................................................................21410.004000005350
..............................................................................TCG-CA---GAAGGGC-----GTGCGAGC.............................................................2019.0090302040
........................GATGGCCGAGCGGTCTAAGG............................................................................................................................2048.503440163200
............................................................AT--TCAG-TCTTGCCCTTCG-CA---GAAGG............................................................................2518.0083202010
............................................................AT--TCAG-TCTTGCCCTTCG-CA---GAAGGGC-----GT...................................................................2918.0080000440
....................................................................................................................................GTTCGAATCCCACTTCTGACACC--G..........24117.828686000000
...................GTCAGGATGGCCGAGCGGTCTAA..............................................................................................................................2347.753120028190
............................................................................................................................GGGCGTGGGTTCGAATCCCACTTCT...................2547.753127000130
............................................................................................................TTCTGGTCCTCTCTGAGGGCGTGGG...................................2547.503000000624
.....................CAGGATGGCCGAGCGGTCTAAGGCC..........................................................................................................................2547.503010001280
......................AGGATGGCCGAGCGGTCTAAGG............................................................................................................................2247.503041123190
......................AGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................2347.002820124190
............................................................................CTTCG-CA---GAAGGGC-----GTGCGAGC.............................................................2217.0070401110
...................................................................................................GTGCGAGCGTTCTGGTCCT..................................................1917.0070002230
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCA........................2246.752721041280
.....................CAGGATGGCCGAGCGGTCTAAG.............................................................................................................................2246.752720042190
........................GATGGCCGAGCGGTCTAAG.............................................................................................................................1946.752710204200
...........................................................................................................................AGGGCGTGGGTTCGAATC...........................1866.674070102480
......................................................................................................................................TCGAATCCCACTTCTGACAC..............20116.557251400980
......................AGGATGGCCGAGCGGTCTAAGGCC..........................................................................................................................2446.502630002210
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCTG..................2746.002412010380
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTT.....................2445.752340006130
............................................................................................................................GGGCGTGGGTTCGAATCCCACT......................2245.752316100060
............................................................................................................TTCTGGTCCTCTCTGAGGGCGTGG....................................2445.752370000115
.......................GGATGGCCGAGCGGTCTAAGG............................................................................................................................2145.752350114120
....................................................................................................................................GTTCGAATCCCACTTCTG..................18115.646251104150
.....................CAGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................2445.50226502180
...................GTCAGGATGGCCGAGCGGG..................................................................................................................................1945.2521100011000
.....................CAGGATGGCCGAGCGGTCTAAGG............................................................................................................................2345.252141111130
............................................................................................................................GGGCGTGGGTTCGAATCCC.........................1965.003019200270
.........AACT-----CGTCAGGATGGCCGAGCGGTC.................................................................................................................................2515.0051000004
................................................................................................................GGTCCTCTCTGAGGGCGTGGGT..................................2245.002001017110
.............................CCGAGCGGTCTAAGGCGCCAGAC....................................................................................................................2345.002000000020
........................GATGGCCGAGCGGTCTAAGGC...........................................................................................................................2144.25171222190
...............................................................................................................TGGTCCTCTCTGAGGGCGTGGGT..................................2344.251720200130
...................................................................G-TCTTGCCCTTCG-CA---GAAGGGC-----GT...................................................................2414.0040010030
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCACT......................2444.00161100860
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCTGA.................2844.001610100410
......................AGGATGGCCGAGCGG...................................................................................................................................1544.001600000016
.............................................................................TTCG-CA---GAAGGGC-----GTGCGAGC.............................................................2114.0040310000
............................................................AT--TCAG-TCTTGCCCTTCG-CA---.................................................................................2014.0040103000
...................................................................................................................................GGTTCGAATCCCACTTCTGA.................20113.824242000000
...........................................................................................................GTTCTGGTCCTCTCTGAGGGCGTGGGT..................................2743.75150010248
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCCACTTCT...................2843.751500002130
.....................................................................................................................................TTCGAATCCCACTTCTGA.................18113.644036000220
..................................................................................................................................GGGTTCGAATCCCACTTCTGA.................21113.553937200000
........................................................................................................AGCGTTCTGGTCCTCTCTG.............................................1943.50146005030
...................GTCAGGATGGCCGAGCGT...................................................................................................................................1843.50149000410
..............................................................................................................................GCGTGGGTTCGAATCCCACTTCTGA.................25113.273636000000
.........................ATGGCCGAGCGGTCTAAGG............................................................................................................................1943.25132100460
.............................................................................................C-----GTGCGAGCGTTCTGGTCCT..................................................2013.0030002010
...................................................................................................GTGCGAGCGTTCTGGTCC...................................................1813.0030100020
......................................CTAAGGCGCCAGACTCAAG-GC............................................................................................................2113.0030201000
..................................................................AG-TCTTGCCCTTCG-CA---GAAGG............................................................................2113.0030003000
............................................................AT--TCAG-TCTTGCCCTTCG-CA---GAAGGGC-----G....................................................................2813.0030000120
...........CT-----CGTCAGGATGGCCGAGC.....................................................................................................................................1913.0030000210
............................................................................CTTCG-CA---GAAGGGC-----GTGCGA...............................................................2013.0030000120
.............................................................T--TCAG-TCTTGCCCTTCG-CA---GAAGGGC-----GT...................................................................2813.0030000030
................................................................TCAG-TCTTGCCCTTCG-CA---GAAGGGC-----.....................................................................2513.0030200010
................................................AGACTCAAG-GCAT--TCAG-T..................................................................................................1813.0030001020
...........................................................................................................................AGGGCGTGGGTTCGAATCCCAC.......................2262.83170001880
........................................................................................................................CTGAGGGCGTGGGTTCGAATCCCA........................2442.75110012440
....................TCAGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................2542.751110000010
......................AGGATGGCCGAGCGGTCT................................................................................................................................1842.501000000100
............................................................................................................................GGGCGTGGGTTCGAATCCCA........................2062.501511101020
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCC.........................2242.50102000800
....................................................................................................................................GTTCGAATCCCACTTCTGAC................20112.272518500200
droYak3
CGC--CCGCAACG-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-GCAT--TCAG-TCTTGCCCTTCG-CA---GAAGGGC-----GTGCGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--AACTTTTTTTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...................GTCAGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................26472.2528911214674014500046
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCT...................26465.502621159523131270006
...................GTCAGGATGGCCGAGCGG...................................................................................................................................18452.252093812641691000015
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACT......................23449.75199049511241460000
...................GTCAGGATGGCCGAGCGGTC.................................................................................................................................20427.751111138738151500014
...................GTCAGGATGGCCGAGCGGTCTAAGG............................................................................................................................25426.7510721066012600056
...................GTCAGGATGGCCGAGCGGTCTAAGGCGCC........................................................................................................................29421.5086190280001200027
......................................................................................................................................TCGAATCCCACTTCTGACACC--...........211217.17206341581201100000
...................GTCAGGATGGCCGAGCGGTCTAAG.............................................................................................................................24416.50661311004400016
...................GTCAGGATGGCCGAGCGGTCTAAGGCC..........................................................................................................................27416.2565005000600000
....................................................................................................................................GTTCGAATCCCACTTCTGA.................191216.251951111320416400000
...........................................................................................................................AGGGCGTGGGTTCGAATCCCA........................21615.1791231114511450000
...................GTCAGGATGGCCGAGC.....................................................................................................................................161014.3014300000150000128
...........................................................................................................................AGGGCGTGGGTTCGAATCCC.........................20613.3380039185540000
...................GTCAGGATGGCCGAGCGGT..................................................................................................................................19413.00520102366500020
..............................................................................TCG-CA---GAAGGGC-----GTGCGAGC.............................................................20113.0013001300000000
...................GTCAGGATGGCCGAGCGGTCTAAGGCGC.........................................................................................................................28411.50462024200180000
......................................CTAAGGCGCCAGACTCAAG-GC............................................................................................................2119.00900810000000
.............................................................................TTCG-CA---GAAGGGC-----GTGCGAGC.............................................................2117.00700600010000
...........................................................................................................................AGGGCGTGGGTTCGAATCC..........................1967.0042234003300000
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTC....................2546.7527022000050000
......................................................................................................................................TCGAATCCCACTTCTGACAC..............20126.337625401100000000
...................GTCAGGATGGCCGAGCGGTCTAAGGCGCCA.......................................................................................................................3045.7523000000500018
...................GTCAGGATGGCCGAGCG....................................................................................................................................1745.7523000002100002
............................................................................CTTCG-CA---GAAGGGC-----GTGCGAGC.............................................................2215.00500410000000
..........................................................GCAT--TCAG-TCTTGCCCTTCG-CA---GAAG.............................................................................2614.00401000000003
..................................................................AG-TCTTGCCCTTCG-CA---GAAGGG...........................................................................2214.00400040000000
............................................................AT--TCAG-TCTTGCCCTTCG-CA---GAAGGGC-----.....................................................................2714.00402200000000
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCA........................2244.0016003210100000
...................................GGTCTAAGGCGCCAGACTCAAG-GC............................................................................................................2414.00401300000000
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCACT......................2444.0016010112110000
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCC...................2643.7515001500000000
...........................................................................................................................AGGGCGTGGGTTCGAATC...........................1863.3320021011150000
.....................CAGGATGGCCGAGCGGTCTAAG.............................................................................................................................2243.2513000000130000
............................................................AT--TCAG-TCTTGCCCTTCG-CA---GAAGG............................................................................2513.00301020000000
..............................................................................TCG-CA---GAAGGGC-----GTGCGAGCGGC..........................................................2313.00301200000000
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCTGACACC--...........3243.0012000000000012
............................................................AT--TCAG-TCTTGCCCTTCG-CA---GAAGGGC-----GT...................................................................2913.00300000030000
............................................................AT--TCAG-TCTTGCCCTTCG-CA---GAAG.............................................................................2413.00303000000000
............................................................................................................................GGGCGTGGGTTCGAATCCC.........................1962.8317014210000000
.....................CAGGATGGCCGAGCGGTCTAAGG............................................................................................................................2342.751100110090000
........................................................................................................................................GAATCCCACTTCTGACACC--...........19122.7533052700100000
...................GTCAGGATGGCCGAGCGGTCT................................................................................................................................2142.751162010200000
............................................................................................................................GGGCGTGGGTTCGAATCCCACTTCT...................2542.7511010000010000
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCTGAC................2942.501000800020000
.....................CAGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................2442.501000600040000
......................AGGATGGCCGAGCGGTCTAAGG............................................................................................................................2242.25901120050000
...................GTCAGGATGGCCGAGCGT...................................................................................................................................1842.25918000000000
......................AGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................2342.25931300020000
............................................................................................................................GGGCGTGGGTTCGAATCCCACTTC....................2442.25907200000000
............................................................................................................TTCTGGTCCTCTCTGAGGGCGTGGG...................................2542.25920321100000
.......................................................................................................................................CGAATCCCACTTCTGACACC--...........20122.0825219400000000
............................................................................................................................GGGCGTGGGTTCGAATCCCACT......................2242.00808000000000
......................................................................................................................................TCGAATCCCACTTCTGACA...............19122.0024118300110000
............................................................................................................................................CCCACTTCTGACAAA--AACTTTTT...2312.00220000000000
..................................................................................CA---GAAGGGC-----GTGCGAGCGG...........................................................1912.00201100000000
................................................................TCAG-TCTTGCCCTTCG-CA---GAAGGGC-----GT...................................................................2712.00200100010000
....................................GTCTAAGGCGCCAGACTCAAG-GC............................................................................................................2312.00200200000000
...........................................................CAT--TCAG-TCTTGCCCTTCG-CA---GAAGG............................................................................2612.00200110000000
.............................................................................................C-----GTGCGAGCGTTCTGGTCCTCC................................................2212.00200200000000
.....................CAGGATGGCCGAGCGGTCTAAGGCC..........................................................................................................................2542.00800000080000
...................GTCAGGATGGCCGAGCGGTCTAA..............................................................................................................................2342.00810040120000
.........AACG-----TGTCAGGATGGCCGAGCG....................................................................................................................................2212.00201100000000
................................................................................G-CA---GAAGGGC-----GTGCGAGC.............................................................1812.00200200000000
...............................................................................CG-CA---GAAGGGC-----GTGCGAGCGTT..........................................................2212.00200000020000
.......................................................................................................................................CGAATCCCACTTCTGACAAA--AACTTTTT...2812.00211000000000
......................................................................................................................CTCTGAGGGCGTGGGTTCGAATCCCA........................2642.00800100070000
........................GATGGCCGAGCGGTCTAAG.............................................................................................................................1942.00800000260000
...................................................................................................GTGCGAGCGTTCTGGTCCT..................................................1912.00200110000000
.........AACG-----TGTCAGGATGGCCGAGC.....................................................................................................................................2112.00200020000000
............................................................AT--TCAG-TCTTGCCCTTCG-CA---GAAGGG...........................................................................2612.00201010000000
........................GATGGCCGAGCGGTCTAAGG............................................................................................................................2042.00800021050000
..........................................................GCAT--TCAG-TCTTGCCCTTCG-CA---GAA..............................................................................2512.00202000000000
....................................................................................................................................GTTCGAATCCCACTTCTG..................18121.832299200110000
............................................................................................................................GGGCGTGGGTTCGAATCC..........................1861.831108300000000
...................GTCAGGATGGCCGAGCGGTCTA...............................................................................................................................2241.75701021030000
.......................GGATGGCCGAGCGGTCTAAGG............................................................................................................................2141.75701000060000
.........................ATGGCCGAGCGGTCTAAGG............................................................................................................................1941.75700200050000
........................GATGGCCGAGCGGTCTAAGGCGC.........................................................................................................................2341.75701410010000
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTT.....................2441.50602002020000
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCTG..................2741.50622100010000
......................AGGATGGCCGAGCGGTCTAAG.............................................................................................................................2141.50600011040000
...............................................................................................................TGGTCCTCTCTGAGGGCGTGGG...................................2241.50601320000000
.....................CAGGATGGCCGAGCGGTCTA...............................................................................................................................2041.50600000000006
..........................TGGCCGAGCGGTCTAAGGCGCCAGAC....................................................................................................................2641.50600600000000
........................GATGGCCGAGCGGTCTAAGGC...........................................................................................................................2141.50600320100000
.............................................................................................................................GGCGTGGGTTCGAATCCCACTT.....................22121.4217017000000000
...................................................................................................................................GGTTCGAATCCCACTTCTGA.................20121.3316013200010000
.......................................................................................................GAGCGTTCTGGTCCTCTCTGAGGGCGTGGGT..................................3131.33400000000004
....................................................................................................................CTCTCTGAGGGCGTGGGT..................................1841.25511201000000
..............................................................................................................................GCGTGGGTTCGAATCCCACTTCTGA.................25121.2515012000030000
..........................................................................................................................GAGGGCGTGGGTTCGAATCCC.........................2141.25502000030000
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCTGA.................2841.25500200030000
.......................GGATGGCCGAGCGGTCTAAGGCGCC........................................................................................................................2541.25500320000000
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCCA........................2341.25501100030000
...........................................................................................................GTTCTGGTCCTCTCTGAGG..........................................1941.25511300000000
......................AGGATGGCCGAGCGGTCTAAGGCGC.........................................................................................................................2541.25500200120000
..................................................................................................................TCCTCTCTGAGGGCGTGGGT..................................2041.25502100200000
...........................................................................................................................AGGGCGTGGGTTCGAATCCCAC.......................2261.17700321100000
droSec2
GGC--CCGCAACA-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-GCAT--TCGG-TCTTGCCCTTCG-CA---GAAGGGC-----GTGTGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--AT--------TSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................GTCAGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................264624.00249624264642144
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCT...................264487.251949645432571085
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACT......................234264.50105827415106510
...................GTCAGGATGGCCGAGCGGTCTAAGG............................................................................................................................254206.00824816345608
......................AGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................234110.754432184419
...................GTCAGGATGGCCGAGCGGTCTAAGGCC..........................................................................................................................274108.754350110121204
...................GTCAGGATGGCCGAGCGG...................................................................................................................................18497.253892610206147
...........................................................................................................................AGGGCGTGGGTTCGAATCCC.........................20688.00528125913444
...........................................................................................................................AGGGCGTGGGTTCGAATCCCA........................21685.00510818640276
...................GTCAGGATGGCCGAGCGGTC.................................................................................................................................20482.7533133775216
...................GTCAGGATGGCCGAGCGGTCTAAG.............................................................................................................................24457.0022814923155
...................GTCAGGATGGCCGAGCGGT..................................................................................................................................19452.5021061130163
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTC....................25444.7517963219122
.......................GGATGGCCGAGCGGTCTAAGGC...........................................................................................................................22435.25141070134
......................AGGATGGCCGAGCGGTCTAAGG............................................................................................................................22435.001400171122
...................GTCAGGATGGCCGAGCGGTCTAA..............................................................................................................................23433.7513501112112
............................................................................................................................GGGCGTGGGTTCGAATCCC.........................19630.831851704164
...........................................................................................................................AGGGCGTGGGTTCGAATCC..........................19625.171516173125
..............................CGAGCGGTCTAAGGCGCCT.......................................................................................................................19824.6319712250025
.....................CAGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................24424.5098414476
...................GTCAGGATGGCCGAGCGGTCTAAGGCGC.........................................................................................................................28421.00840183234
.....................CAGGATGGCCGAGCGGTCTAAGG............................................................................................................................23418.5074032339
.......................GGATGGCCGAGCGGTCTAAGG............................................................................................................................21418.007208460
.......................GGATGGCCGAGCGGTCTAAG.............................................................................................................................20418.007217262
...................GTCAGGATGGCCGAGCGGTCT................................................................................................................................21416.0064115642
...................GTCAGGATGGCCGAGCGGTCTAG..............................................................................................................................23413.005200052
........................GATGGCCGAGCGGTCTAAGGC...........................................................................................................................21412.505022244
......................................................................................................................................TCGAATCCCACTTCTGACACC--...........211312.23159154500
...................GTCAGGATGGCCGAGCGGTCTA...............................................................................................................................22411.0044061127
........................GATGGCCGAGCGGTCTAAGG............................................................................................................................20410.754308233
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTT.....................2449.5038016319
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCACTTCT...................2749.2537211159
...........................................................................................................................AGGGCGTGGGTTCGAATC...........................1869.175559140
...................GTCAGGATGGCCGAGCGGTCTGG..............................................................................................................................2349.003600036
.........AACA-----TGTCAGGATGGCCGAGC.....................................................................................................................................2119.0090081
.....................CAGGATGGCCGAGCGGTCTAAGGCC..........................................................................................................................2548.003205918
...................GTCAGGATGGCCGAGCGGG..................................................................................................................................1947.753121271
......................AGGATGGCCGAGCGGTCTAAGGCC..........................................................................................................................2447.753101228
.........................ATGGCCGAGCGGTCTAAGGC...........................................................................................................................2047.503000129
............................................................................................................................GGGCGTGGGTTCGAATCC..........................1867.504580037
......................AGGATGGCCGAGCGGTCTAAG.............................................................................................................................2147.252905024
....................................................................................................................................GTTCGAATCCCACTTCTGA.................19126.8382528913
..................................................................................................................TCCTCTCTGAGGGCGTGGGT..................................2046.252581511
..........................................................................................................................GAGGGCGTGGGTTCGAATCCC.........................2146.002434215
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCTG..................2745.752351215
........................GATGGCCGAGCGGTCTAAG.............................................................................................................................1945.752314612
............A-----TGTCAGGATGGCCGAGC.....................................................................................................................................1825.501100110
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCC.........................2245.25215628
.....................CAGGATGGCCGAGCGGTCTAAG.............................................................................................................................2245.002009110
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCCA........................2345.00200956
............................................................................................................................GGGCGTGGGTTCGAATCCCACT......................2244.501811142
...................GTCAGGATGGCCGAGCGGTCTAAGGCGCC........................................................................................................................2944.50180279
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCA........................2244.50180729
...........................................................................................................................AGGGCGTGGGTTCGAATCCCG........................2164.332601124
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCACT......................2444.25171448
...............................................................................CG-CA---GAAGGGC-----GTGTGAGC.............................................................1914.0041030
...................GTCAGGATGGCCGAGCGGTCTG...............................................................................................................................2244.001600016
..............................................................................TCG-CA---GAAGGGC-----GTGTGAGC.............................................................2014.0040040
............................................................................................................................GGGCGTGGGTTCGAATCCCACTTCT...................2543.751511031
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCCACTTCT...................2843.75150294
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCTGA.................2843.50140383
.............................................................................................................................GGCGTGGGTTCGAATCCC.........................18193.3263520011
..............................CGAGCGGTCTAAGGCGCC........................................................................................................................1883.132520041
.........AACA-----TGTCAGGATGGCCGAGCG....................................................................................................................................2213.0030030
..........................TGGCCGAGCGGTCTAAGG............................................................................................................................18153.0045232317
.................................................................CGG-TCTTGCCCTTCG-CA---GAAGGGC-----GTGTGA...............................................................3013.0030030
...........CA-----TGTCAGGATGGCCGAG......................................................................................................................................1813.0030030
...............................................................................CG-CA---GAAGGGC-----GTGTGAGCGTTCTG.......................................................2513.0030021
............A-----TGTCAGGATGGCCGAGCGGT..................................................................................................................................2123.0062040
.........AACA-----TGTCAGGATGGCCG........................................................................................................................................1813.0030030
.........AACA-----TGTCAGGATGGCCGAG......................................................................................................................................2013.0030030
.........AACA-----TGTCAGGATGGCCGAGCGGT..................................................................................................................................2413.0030030
..................................................................GG-TCTTGCCCTTCG-CA---GAAGGGC-----G....................................................................2413.0030030
............................................................AT--TCGG-TCTTGCCCTTCG-CA---GAAGGG...........................................................................2613.0030030
...............................GAGCGGTCTAAGGCGCCT.......................................................................................................................1882.752220002
......................AGGATGGCCGAGCGGTCT................................................................................................................................1842.751100011
......................AGGATGGCCGAGCGGTCTAA..............................................................................................................................2042.75110227
...................GTCAGGATGGCCGAGCGGCA.................................................................................................................................2052.60135080
droSim2
GGC--CCGCAACA-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-GCAT--TCAG-TCTTGCCCTTCG-CA---GAAGGGC-----GTGTGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--AT--------TSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................................................................................................................................TCGAATCCCACTTCTGACA...............19121238.921486783227631721500006000000
...................GTCAGGATGGCCGAGC.....................................................................................................................................164593.502374000000412532348002000
...................GTCAGGATGGCCGAGCG....................................................................................................................................174354.00141600000076126101302035002
...................GTCAGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................264208.758352572341037446035301481510000
...................GTCAGGATGGCCGAG......................................................................................................................................1513177.5423080000009011076955987000000
...................GTCAGGATGGCCGAGCGG...................................................................................................................................184169.25677591441672819933613311113000
......................................................................................................................................TCGAATCCCACTTCTGAC................1812135.831630716471589700000000000
......................................................................................................................................TCGAATCCCACTTCTGACAA..............2012100.751209000067653300000000000
.......................................................................................................................................CGAATCCCACTTCTGACA...............181293.671124400084527300001100000
....................................................................................................................................GTTCGAATCCCACTTCTGA.................191275.429055128230507117461011400000
...................GTCAGGATGGCCGAGCGGTC.................................................................................................................................20466.5026640342323604321889303000
...................GTCAGGATGGCCGAGCGGTCTAAGG............................................................................................................................25455.502220442442942511851409000
....................................................................................................................................GTTCGAATCCCACTTCTGAC................201245.17542138131439010400000000000
.....................................................................................................................................TTCGAATCCCACTTCTGACA...............201242.5851120104426501000000000
...................GTCAGGATGGCCGAGCGGT..................................................................................................................................19432.50130805142402710533111001
....................................................................................................................................GTTCGAATCCCACTTCTG..................181231.4237723132232286000000100000
....................................................................................................................................GTTCGAATCCCACTTCTGACA...............211230.00360134223122601000000000
.......................................................................................................................................CGAATCCCACTTCTGACAAA--...........20627.3316460510366000100100000
...................GTCAGGATGGCCGAGG.....................................................................................................................................161620.133220000001801312000000
...................GTCAGGATGGCCGAGCGGTCTAAG.............................................................................................................................24420.00801132428001035221000
...................................................................................................................................GGTTCGAATCCCACTTCTGACA...............221218.6722410001309101100000000
...................GTCAGGATGGCCGAGCGGTCTA...............................................................................................................................22415.7563012000201331721013000
............................................................................................................TTCTGGTCCTCTCTGAGGGCGTGGG...................................25411.5046318200002128100000
...................GTCAGGATGGCCGAGCGGG..................................................................................................................................19411.0044011000020037111000
.....................................................................................................................................TTCGAATCCCACTTCTGA.................181210.9213120021104013000000000
......................................................................................................................................TCGAATCCCACTTCTGACACC--...........211310.7714097188130011002000000
...................GTCAGGATGGCCGAGCGGTCT................................................................................................................................21410.2541300001220934404000
.........AACA-----TGTCAGGATGGCCGAGCGGTC.................................................................................................................................25110.001000100032111010000
..................................................................................................................TCCTCTCTGAGGGCGTGGG...................................1949.0036000104000031000000
...................GTCAGGATGGCCGAGCGGTCTAAGGCGCC........................................................................................................................2949.0036679110000002100000
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCT...................2648.50340001300000071400000
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACT......................2348.50340001002210101800000
...................GTCAGGATGGCCGAGCGGTCTAA..............................................................................................................................2347.7531000104033110351000
..................................................................................................................................GGGTTCGAATCCCACTTCTGACA...............23127.58910000781300000000000
....................................................................................................................................GTTCGAATCCCACTTCTGACAA..............22127.58910000652600000000000
...........................................................................................................................AGGGCGTGGGTTCGAATCCCA........................2167.33445452000000111700000
...................GTCAGGATGGCCGAGCGGTCTAAGGCGC.........................................................................................................................2847.2529000400000025000000
.............................................................T--TCAG-TCTTGCCCTTCG-CA---GAAGGGC-----GTG..................................................................2917.00710600000000000000
...............................................................................................................TGGTCCTCTCTGAGGGCGTGG....................................2146.0024000002000004000000
.........AACA-----TGTCAGGATGGCCGAGCGGTCTA...............................................................................................................................2716.00600000000200022000
.........AACA-----TGTCAGGATGGCCGAGC.....................................................................................................................................2116.00601200000100200000
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCTGA.................2845.7523000230000000000000
......................................................................................................TGAGCGTTCTGGTCCTCTCTGAGGGCG.......................................2745.502200000094009000000
...................GTCAGGATGGCCGAGCGGTCTAAGGCC..........................................................................................................................2745.2521010160010003000000
.....................................................................................................................................TTCGAATCCCACTTCTGAC................19125.0861611152000000000000
..........................................................................................................................................ATCCCACTTCTGACAAA--A..........1825.001000008200000000000
.........AACA-----TGTCAGGATGGCCG........................................................................................................................................1815.00540000000001000000
...............................................................................CG-CA---GAAGGGC-----GTGTGAGCGTTCT........................................................2415.00500000000003200000
...................GTCAGGATGGCCGAGCGGTT.................................................................................................................................2045.0020000000000000020000
...................GTCAGGATGGCCGAGCC....................................................................................................................................1744.7519000000000019000000
.......................................................................................................................................CGAATCCCACTTCTGACAAA--A..........2124.50930104000010000000
...................................................................................................................................GGTTCGAATCCCACTTCTG..................19124.42530001262600000000000
.......................................................................................................................................CGAATCCCACTTCTGACAA..............19124.4253000052000100000000
.............................................................................................................................GGCGTGGGTTCGAATCCC.........................18184.28770004060000013000000
...................GTCAGGATGGCCGAGCGGC..................................................................................................................................1944.251753000000009000000
......................AGGATGGCCGAGCGGTCTAAG.............................................................................................................................2144.251700004800005000000
...................................................................................................................................GGTTCGAATCCCACTTCTGA.................20124.255100010261301010000000
...........................................................................................................................AGGGCGTGGGTTCGAATCCC.........................2064.172551420001008400000
.........AACA-----TGTCAGGATGGCCGAGCGG...................................................................................................................................2314.00400000000101011000
...................................................................G-TCTTGCCCTTCG-CA---GAAGGGC-----G....................................................................2314.00400000000004000000
.........AACA-----TGTCAGGATGGCCGAGCGGT..................................................................................................................................2414.00400100000101001000
..............................................................................TCG-CA---GAAGGGC-----GTGTGAGCGGC..........................................................2314.00420000000000011000
..........................................................................................................................................ATCCCACTTCTGACA...............15123.924700000013190213000000
...................GTCAGGATGGCCGAGCGGCG.................................................................................................................................2043.7515000000000015000000
.......................GGATGGCCGAGCGGTCTAAG.............................................................................................................................2043.7515010000000013100000
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCTG..................2743.751530540000003000000
...................................................................................................................................GGTTCGAATCCCACTTCTGAC................21123.6744300239000000000000
.......................GGATGGCCGAGCGGTCTAAGGC...........................................................................................................................2243.5014101110000000100000
..................................................................................................................................GGGTTCGAATCCCACTTCTGA.................21123.50420001626000000000000
......................................................................................................TGAGCGTTCTGGTCCTCTCTGAGGGC........................................2643.5014000000200012000000
.....................................................................................................................................TTCGAATCCCACTTCTGACACC--...........22123.4241260810024000000000
...................................................................................................................................GGTTCGAATCCCACTTCT...................18123.2539000039000000000000
.....................................TCTAAGGCGCCAGACTCAAG-GC............................................................................................................2213.00300200010000000000
...................GTCAGGATGGCCGAGCGGCA.................................................................................................................................2053.0015000000000015000000
..............................................................................TCG-CA---GAAGGGC-----GTGTGAGC.............................................................2013.00300000000002100000
..............................................................................TCG-CA---GAAGGGC-----GTGTGAGCGGCA.........................................................2413.00320010000000000000
..............................CGAGCGGTCTAAGGC...........................................................................................................................15152.8743000000529711000000
...........................GGCCGAGCGGTCTAAGGC...........................................................................................................................18152.80424360141400001000000
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCA........................2242.751100010000004600000
......................................................................................................................................TCGAATCCCACTTCTGACAC..............20122.753389570001001200000
....................TCAGGATGGCCGAGCGGTC.................................................................................................................................1942.751130008000000000000
..........................................................................................................................GAGGGCGTGGGTTCA...............................1582.6321000000031710000000
............................................................................................................TTCTGGTCCTCTCTGAGGGCGTG.....................................2342.5010000000000010000000
......................................................................................................TGAGCGTTCTGGTCCTCTCTGAGGGCGTG.....................................2942.501000000020107000000
...........................................................................................................................................TCCCACTTCTGACAAA--A..........1722.50500000001310000000
........................GATGGCCGAGCGGTCTAAGGC...........................................................................................................................2142.501030400000003000000
..................................................................................................................................GGGTTCGAATCCCACTTCTG..................20122.33280002131300000000000
......................AGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................2342.25940100000003100000
............................................................................................................TTCTGGTCCTCTCTGAG...........................................1742.25900000022212000000
...................GTCAGGATGGCCGAGCGT...................................................................................................................................1852.2011010000000010000000
.....................................................................................................................................TTCGAATCCCACTTCTGACAA..............21122.1726000026000000000000
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCACT......................2442.00801000000007000000
..........................................................GCAT--TCAG-TCTTGCCCTTCG-CA---GAA..............................................................................2512.00200000011000000000
.........AACA-----TGTCAGGATGGCCGAGCG....................................................................................................................................2212.00200000000000020000
..........................................................................................GGGC-----GTGTGAGCGTTCTGGTCCT..................................................2312.00200200000000000000
.............................................................................TTCG-CA---GAAGGGC-----GTGTGAGCGTT..........................................................2412.00200000000200000000
..............................................................................TCG-CA---GAAGGGC-----GTGTGAGCG............................................................2112.00200010000000001000
....................TCAGGATGGCCGAGCGG...................................................................................................................................1742.00800000016100000000
..........................TGGCCGAGCGGTCTAAGGC...........................................................................................................................19152.0030000028000002000000
................................................................................G-CA---GAAGGGC-----GTGTGAGCGTTCT........................................................2312.00200000000001100000
.........AACA-----TGTCAGGATGGCCGAGCGGTCTAA..............................................................................................................................2812.00200000000100010000
...................................GGTCTAAGGCGCCAGAC....................................................................................................................1742.00800000000008000000
................................................................................................................GGTCCTCTCTGAGGGCGTGGG...................................2142.00800010000007000000
...................GTCAGGATGGCCGAGCGC...................................................................................................................................1842.00800000010007000000
...................GTCAGGATGGCCGAGCGGTA.................................................................................................................................2042.00800000000001007000
...................GTCAGGATGGCCGAGA.....................................................................................................................................16171.88320000006121112000000
.....................................................................................................................TCTCTGAGGGCGTGGG...................................1641.75700000010006000000
........................GATGGCCGAGCGGTCTAA..............................................................................................................................1841.75700000400003000000
..........................................................................................................................GAGGGCGTGGGTTCGAATCCC.........................2141.75710000000005001000
............................................................................................................TTCTGGTCCTCTCTGAGGGCGTGG....................................2441.75700010001005000000
...................GTCAGGATGGCCGAGCA....................................................................................................................................1751.60800000000008000000
..............................CGAGCGGTCTAAGGCGCC........................................................................................................................1871.571111600000003000000
............................................................................................................TTCTGGTCCTCTCTGAGGGCGTGGGT..................................2641.50600000000006000000
............A-----TGTCAGGATGGCCGAGC.....................................................................................................................................1821.50301100000000100000
.........................................................................................................................TGAGGGCGTGGGTTCGAATC...........................2041.50600100400000100000
........................GATGGCCGAGCGGTCTAAG.............................................................................................................................1941.50600000000006000000
.....................CAGGATGGCCGAGCGGTCTAAGG............................................................................................................................2341.50600000400001001000
.................................................................................................................GTCCTCTCTGAGGGCGTGGG...................................2041.50600004000002000000
..................................................................................................................TCCTCTCTGAGGGCGTGGGT..................................2041.50600010000005000000
.......................................................................................................................TCTGAGGGCGTGGGTTCGAATCCCA........................2541.50600100010102010000
............................................................................................................TTCTGGTCCTCTCTGAGG..........................................1841.50600000022101000000
............A-----TGTCAGGATGGCCGAGCG....................................................................................................................................1921.50300000002000100000
...........................................................................................................................AGGGCGTGGGTTCGAATCC..........................1961.50921310000001100000
.......................................................................................................................TCTGAGGGCGTGGGTTCGAATCCCAC.......................2641.50640000000002000000
...................GTCAGGATGGCCGAGCT....................................................................................................................................1781.3811000000010010000000
...................GTCAGGATGGCCGAA......................................................................................................................................15201.3527000000118017000000
............................................................................................................................GGGCGTGGGTTCGAATCCC.........................1961.33801030000002200000
.......................................................................................................................................CGAATCCCACTTCTGACAC..............19131.311790500000000300000
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCACTTC....................2641.25502200000000100000
.....................CAGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................2441.25512010000000001000
.............................................................................................................TCTGGTCCTCTCTGAGGGCGTGGG...................................2441.25511000000003000000
.................................................................................................................................TGGGTTCGAATCCCACTTCTGACA...............24121.2515000001302000000000
......................AGGATGGCCGAGCGGTCTAAGGCGC.........................................................................................................................2541.25500000000005000000
...................GTCAGGATGGCCGAGCGGTCTAAGGCG..........................................................................................................................2741.25500000010004000000
....................................................................................................................CTCTCTGAGGGCGTGGGT..................................1841.25520200000000001000
...................GTCAGGATGGCCGAGCGCC..................................................................................................................................1951.20600000000006000000
...................GTCAGGATGGCCGAGCGGCT.................................................................................................................................2051.20600000000105000000
......................AGGATGGCCGAGCGG...................................................................................................................................1551.20600000022011000000
dm3
CAT--TCGTAACA-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-GCAT--TCAG-TCTTGCCCTTCG-CA---GAAGGGCG---TGTACGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--TT--------TSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................GTCAGGATGGCCGAGCGG...................................................................................................................................1842515.751006300000000000000000400061180010000000003657171241653158383061116750004200000000000000000033000101033522814026211215345216134438735221201001200021202146341944458400010185853235313224350360100009031010140300152856223120700504318294860016016640000720173231001613919933483156241381131406520130000368145423122182013142271024912584251394122012170315020226181043230203140196146116712321663210129464283834626914018082935261238111957447426011925326255349332341084613124
...................GTCAGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................2641452.0058080000000000000000001000010000000000001000001010000013000000000000000000000000001000000006007105000533271300021121100000010000000000200000000100161740421416574330400000000015011000001141001000500000130020120000001617030098100221840014211131141310000522022100510000902102100000000002287000000000416719562483858261109002901120811512169111247657556123240821428208821945847812462482024200
...................GTCAGGATGGCCGAGCGGTC.................................................................................................................................2041316.25526500000100000010000000033110090000000018381721292207001113390000000000000000000000102100000011091015029411121810002300200000100200020108925207187000200830074715191504022000020030084030016149951736010012167862006012700000398610101615367329321480319120408182190110005102571241541416410172735364153455910120400030019164332422192162253073314820182512303882236936553140501559819334738563095121753221146511585193137265712918197
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCT...................264875.0035000000161000000001000000000100000000000000000014000000000000000000000000000000000000015248220300804810023358283027172332612835371805001000150304171000000000000003010020211400000000000000028488019110043052301405600000000011000000000000000000000000372200011000000000004121160024211503100120000000020100060000000000211001225327438764110000022395000002112001000031117410150528
...................GTCAGGATGGCCGAGCGGTCTAAGG............................................................................................................................254665.75266300000000000000000000001100000000000000001001101200002000000000000000000000000010000000001083040097221560100300020000100000000000000001001300014203916201100050000000001210000002000005000400100250100223000001843033103025189230433030115426000000300010114960310030215020120210031300000000712333174621032820631157659211830531921598454252020257153817186584312839431222271660
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACT......................234571.752287000011000100100000000018000000000000000000470000004510000000000000000000000005230220000200515702517620111024552103260101130030104211000000000000000163301107291010104200000001000251203100022220001510000001001000012000000110100007317593707481411000020000331352321211241611973914338340012212300000000012531442412171012557095030209146800612324149285641306236521165722649525860
...................GTCAGGATGGCCGAGCGGT..................................................................................................................................194540.252161000000000000000000000238001200000000232121024234200013110003600000000000000000035631130242207001202235091001528150640102906000010014222103245000100454003814256000520110110040974000004061112901002017232000302130000092113337196743083102111914831211114012000035001121002001190003231332032310511260004000287113841191696865209311125044313718258353911185618481648250110422336114668111126198
...................GTCAGGATGGCCGAGCG....................................................................................................................................174453.7518150000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000501000000000000000000000000000000000000001000000110000000000000000000000000000000000000000000045392723443621350410126112000118011000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000039
...................GTCAGGATGGCCGAGCGGTCTAAG.............................................................................................................................244361.751447000000000000000000000000000000000000101010010001100000000010000000000000000000100000000100110000212140010000002020020000000000000000310010002040392130240010000002000300000001001002000100010220000122000006101010068131612181002100140400000020000011217100031010212020011114001000010074312103028511314141042139910424412334113512121221137553693542011233134225791320
...........................................................................................................................AGGGCGTGGGTTCGAATCCC.........................206326.5019590000000000000000000000110000000000083325141012400221200000000000000000000000000000000200403023061510137010030010000000210001000000000000000004026220020310482300000000090000430100030400050000000308411000400000002000000121113415142833271500010000010100000116020110040110000000110160000000001001722778292641346155744720102529521551810623001362096215432922132612430
..................................................................................................................TCCTCTCTGAGGGCGTGGGT..................................203317.3395200000000000000000000011100000000000422003002000000214020680000000000000000000011010000000010100100000000002100000000000000000100000000000000020000741104070000000511560000000000201000063000409100000930000000002000911971680010131100000000201210000021102765000324021601332020000000003001233220111802100113011400115021417300901700301447129210
...................GTCAGGATGGCCGAGCGGTCT................................................................................................................................214291.251165000000000000000000000000008000000001111000001011000000000000000000000000000000210000000010000300000000000004001000000010001000000100120000010010020200000040000000010123301000510322313000040000040032025000003000000111121032000010000605000002101210120811121011152303122010302030000110032122524923238207311310541294448923151625111620171025348120177541315911813610
...................GTCAGGATGGCCGAGCGGG..................................................................................................................................194260.7510430000000000000000000002140000000000008281572211453156606525120000000000000000000000000000000000000000000000140000000000000000000000000000000100000000000306092105000000000300000000000000002010000121500000070000013000000000622935042227030710000000000500000020000000110040000000200000000000000010000343337112489616011000504447010003050300205590336000210
...........................................................................................................................AGGGCGTGGGTTCGAATCCCA........................216255.67153400000000000000000000011110000000000022174001440001112501000000000000000000000000000100000320642707714494342000421200014011000011000000000000000102353714123311619286103200000200100110300050100050020000004700000310000017000000100366726482135221172000000033023000028040661017001110101000096000000000100147595223723378251028103170033161535240221310708040114512157121267100
.......................GGATGGCCGAGCGGTCTAAG.............................................................................................................................204246.00984000000000000000000000000001000000000110000000010000010000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000010100005000000000034000000000000000000402000010000010000000000000023347100020000000000000010000232126202425100315012010511000000000004113112000105603314222212300251913215421413712546052077213927661630
........................GATGGCCGAGCGGTCTAAG.............................................................................................................................194221.25885000000000000000000000000000000000000000002001000010000000000000000000000000000000000000000000000000000000100000000000000000000000000000000002100010030011000000010030000000000000000000000000100000004000000000000010454512001002000000000000001212001120221243018151652111130100000000316060082102421101432331264202228111054412391111638261579011323633410
......................AGGATGGCCGAGCGGTCTAAG.............................................................................................................................214208.75835000000000000000000000000000000000000000011000000010001000000000000000000000000000000000000000000000000000000002100000000000000000000000000000100011000100000000000020000000000000000020000010010000010000000018310017841220100000000000100001100001010172010150224202100003220000000000120022011616216041351401254001095165296435762411120543234222771040
...................GTCAGGATGGCCGAGCGGTCTA...............................................................................................................................224188.0075200000000000000000000000100300000000001000000000100000000010000000000000000000000000000110050020000010000000000000000010000000000000000003100010004001001200000000003001001000010210040010301000300032000000110300021132221722010201001000000002000000001110010011103000100012100000000011410001410422154102462327512386281117481115322323166181469199981215526
...................GTCAGGATGGCCGAGCGGTCTAAGGCGC.........................................................................................................................284179.2571700000000000000000000000000000000000000000000000010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000120006232100600000000000000000000000000000000000000000000000000200000000001011100200100021000002100000000000000000000000010000001000000001000000006010200003010101201503261314121538346557120200
............................................................................................................TTCTGGTCCTCTCTGAGGGCGTGG....................................243175.6752700000000000000000000000000000000000010101021000001700000001000000000000000000311000000100000000000000000000000000000000000000000008035314064572109861450142640101000000000000000000000010005000000000102011000000005001001400024104412021000300000001000000000000000000000000000000000000000001000000010010004030100001051000101100000000001300000
...................GTCAGGATGGCCGAGCGGTCTAA..............................................................................................................................234165.7566300000000000000000000010000000000000000000000000000000000000000000000000000000000000000100050030011302000000000000000000000001000000010101000110001011020000000000000000000001000010100200020000010010000000400000005215432900200000100000001100000130412000000010110000011011000000002101120111381641320232101231028252171613514111181923589131025139595905
......................................................................................................................................TCGAATCCCACTTCTGACAC..............2012144.4217330000000000000200000000001810000000000200000010001000000000000000000000000000000222200000135200010012140010100181124011900001003400010202046001100000000000000000000000000116121133012403000102030330190101201100001000000010000000031221110726122231623272700331000000025896314671366121710405343312905564762681180000000020120300000020700000200001100146114842232011045020031154813170
......................AGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................234144.25577000001000000000000400000000000000000001000100000000000000000000000000000000000000100000000400411210071000004000000000100001000000000000000001142632040200004000000000000100000300020000000011020000020000000220000002020102000000000000000000000011111310201301100000100002014200000000001011122324231002201440083913061242404254140218136135317530
............................................................................................................TTCTGGTCCTCTCTGAGGGCGTGGG...................................253141.3342400000000000000000000011100000000000020103155000110431100010000000000000000000332200000000000001000000000000000000000010000000000002421610124380158043057101343535900000000000010000000000000000000000111400010000042040009100356299045705320010000113000102010020100012120000101020100000000000000100200000013101000005660010202002000001011400000
......................................................................................................................................TCGAATCCCACTTCTGACACC--...........2113127.08165200000000000001010000001083000000000000000001000000010100000000000000000000000064340000002711000000238000101181132221015000060063000502000320066000010000001020000001000001120360380230500010506068019220003010000030004000300000000201102221361469383838443013250000000013915304157191972122543103114424387731240000000050307000100003000003811102001962650225101022401022663721140
..................................................................AG-TCTTGCCCTTCG-CA---GAAGGG...........................................................................221120.00120000000000000000000000000000000000000000000140000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100210000000040006000000000000000000000000100000000000000100000000080103010100000000000000000101102034214000300110100000000000000000100100100110000000000001100001000003000100103910130
...........................................................................................................................AGGGCGTGGGTTCGAATCC..........................196119.8371900000000000000000000020000000000000101320220010000000000000000000000000000000000000000000100020001005000000000000000012000000000000000000000131270012412530000000000000001200000100030100000001032000011000000000000000015269202172305020000000000000000004001402010000000001000170000000000000423522253727255263133001515230413003011168792551812201170200
..........................................................................................................................GAGGGCGTGGGTTCGAATCCC.........................214109.50438000000000000000000000001000000000000101704110200000310000000000000000000000000000000000110000000000002000001000000000000000000000000002100004000010001211000000000000000000000000000000000000000000100000000020000000117301030302010000000000000000000002012000000001000000000000000010000010044031202140111106440222012210181923331083237800
..........................TGGCCGAGCGGTCTAAGG............................................................................................................................1814102.79143900000000000000000000000100000000000000000000000001000000000000000000000000000000000001001011010011342200000300001000111702000001111701000000006520000010000000000000010016040002020230500000000000000001000000000000000012040010000000000000000001000000100000000000000000010610001000002000142140000200000000000020000000000000519909197203834100000
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCC.........................224102.254090000000000000000000000010000000000003001000000000010000000000000000000000000000000000100200001000000100001182300001000000000000000000000000020100110010000000000000000000000000000000000010000200001020000010000000013235502030201000000000100000010000032100000000010000000000000000000000001141131101210000312091090155762610267912266161740
........................................................................................................................................GAATCCCACTTCTGACAC..............181392.23119900000000000000000000000000000000000000000000000000000000000000000000000000000312516150000035060000000000000000917419310511490000131000000000000000000000000000000000000000000005213001010000000020000001150000000000000000000000000005810000020001001001000000000140010000707000910000001071001706200000000031400000000010000000100000002002000000000000000163000
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCACT......................24487.75351000000000000000000000001000000000000000000330000000200000000000000000000000000000000000010100000201110011020000000000000000000010000100000004010090211711010000000000000010100001000000001000000000000000003000000000000144041410015000000000000000000310275100102001000000000000000000000000000127600001100011022202010000000316415111489560
......................AGGATGGCCGAGCGGTCTAAGG............................................................................................................................22486.2534500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000002412000000000000000000000000000000000000000011000000000020000000000001000000000000100000100000020000000000000000000001110000000010010000000000010002800000000000000000000010000100000200021103000100221212240083712202030120321379943217010000
.......................GGATGGCCGAGCGGTCTAAGG............................................................................................................................21482.25329000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000001000000000001000000000000020010010000000000000000000000010000000000000010002100000000000000000000020100013001010000300000000000000000000003000001150240123130111201972411100320108173412032821000
.........AACA-----TGTCAGGATGGCCGAGC.....................................................................................................................................21181.0081000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010110000000000000000000000100000000000011033000000000000000000000000200000140000000000000000000000000000000000000000000000000000000000000510010005160000004020300000004140120021000000
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......................................................................................................................................TCGAATCCCACTTCTGACAAA--T..........22216.00320000000000000000000000000000000000000000000000000000000008660000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000003004200000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................GGGCGTGGGTTCGAATCCCACTTCT...................25416.0064000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000207000001560242000000000000000000000000000000000001001000000000000000000001103000410010000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000010
........................GATGGCCGAGCGGTCTAA..............................................................................................................................18415.75630000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000012000000230000000000000000000000000000000000000020000000000000000000000000000000000000000000000000010000000000000100010100000000000000000010000000000012000000000011120100000000002120000001151400213000000602001000000001000001400000
......................AGGATGGCCGAGCGGTCTAAGGCGC.........................................................................................................................25415.756300000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000001011140000004000030101112010103203300000
.....................................................................................................................TCTCTGAGGGCGTGGGTTCGAATCCC.........................26315.33460000000000000000000000000000000000000000200000000000000000000000000000000000000100070000000000000000000020100000000000000000000000000000000000000001000000000000000000000000000010000000000000200000000000002000000000002000000000000000001000000000000000000000000000000000000000000000000001000000020000000201001001000000002105700010
..............................CGAGCGGTCTAAGGCGCC........................................................................................................................18815.13121000000000000000000000000000000000000000000000001000000000000000000000000000000000100080300010000000122007413010001000000000000000000000000000010000202120000000000001000001000000010000000000000000000000000000000000001104000000000000000022000000000000021000100210011011010000000001300001012213803100010000402000000000000000000100000
.............................................................................................................................GGCGTGGGTTCGAATCCC.........................182015.00300000000000000000000100300000000000000002000101210000000000000000000000000000000000111010100161214117311181102002622020000000000000010100000000000219100001151000000000000000000010001020000000000000000000010000000000000000010590000000000010000000400000240110071211100002003428500000000003004266151062216000000001310000000000000200100001000
...................GTCAGGATGGCCGAGCGCA..................................................................................................................................19615.0090000000000000000000000010000000000000061020011001501410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000100000000000000000000000000000000000000000000000000000000000000001000002800000000000000000000000000001000000100000000000000000000000000000010037110000001553000000000000001311000000
........................................................................................................AGCGTTCTGGTCCTCTCTGAGGT.........................................23314.67440000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000004000000000000000000000000000000000000000000000000000010010001100100000000000000000000110100000001000003000000000010000000000110000001000100002501300060100000010100020
............A-----TGTCAGGATGGCCGAGCGGTCTAAG.............................................................................................................................26314.674400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000011020100000000000000000100000000000001000000000000000010000000001012000120000005001021202010001000101000000
......................................................................................................................................TCGAATCCCACTTCTGACAAA--...........21814.631170000000000000000000000000000000000000000000000000000000006637110000000000000000001000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TCAGGATGGCCGAGCGGTCTAAG.............................................................................................................................23414.505800000000000000000000010000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000010000000100000000100010000000001000000000000000000000000000000000000000000000000000000000100000001010000000003022111014211002202011100
...................GTCAGGATGGCCGAGCGGTT.................................................................................................................................20414.25570000000000000000000000000010000000010000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000010000000000100000100000010000108000000000000000000000000000000000001000020000000000000000100000000000000000101001000000000000000000000011030100000012200040100000100100400113410100
..........................................................................................................................GAGGGCGTGGGTTCGAATC...........................19414.255700000000000000000000000000000000000000010000000000010000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000003000010000000000000000000000000000000000001000000000000000000000001004123030000000000000000000000000000000000000000000000000000000001000001000320000130001002100010000000001001201013010
..................TGTCAGGATGGCCGAGCGGTCT................................................................................................................................22414.255700000000000000000000000000200000000000000000000000000000000000000000000000000000001000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001100000001000000000000000000010000000200010010012000000000000101000020113011200010100010123000020010010001410000
................................................................................G-CA---GAAGGGCG---TGTACGAG..............................................................19114.00140000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000120000200010100020000000000000100000100000
......................................................................CTTGCCCTTCG-CA---GAAGGGCG---T.....................................................................22114.001400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000010
............................................................AT--TCAG-TCTTGCCCTTCG-CA---GAAGGG...........................................................................26114.00140000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010030000000000000000000000001000000000000000000000000000000000000000000100000000000000000001000000002000010000000000000000000000000000000000000000000000100000000010100000000000100
........................................................................................................................CTGAGGGCGTGGGTTCGAATCCCACT......................26314.004200000000000000000000000000000000000000000000000000010000000000000000000000000000000000020000000000000000001000000000000000000000000000000000000000100000000000000000000000000000000000000000000010000000000120000000000000000000000000000000000010000001000000000000000000000000000000000000010000000000000001000310102112000000101301210
.......................GGATGGCCGAGCGGTCTAAGGCGCC........................................................................................................................25414.005600000000000000000000000000000000000000001000000000000000000000000000000000000000000002000001000000000000000000000000000000000000000000000000001000000001030000000000000000000000000000000000010000000000000000000000000000000000000000000000000000100000000000001000000000000000000000100000000001000000100002501030000012001000002500010
........................................................................................................................CTGAGGGCGTGGGTTCGAATCCC.........................23313.674100000000000000000000000000000000000000000000000000000000000000000000000000000000000000011000000001000000121000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000001001000000000000000000000000000000000000000000110000000001000000033012000001501110
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCTGACA...............30413.2553000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000020000000000000000000002040006000000000000000000000000000000000000000000002140307010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000100000000000
.........AACA-----TGTCAGGATGGCCGAGCG....................................................................................................................................22113.00130000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000002000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000002000000011010000001000000000000000000200000
.....................................................................TCTTGCCCTTCG-CA---GAAGGGCG---TGTACG................................................................28113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000100000000000000000000000000000000000000000000000000000000000000000000000100005000000000000000000000000000000000000000000000000000000000000000000000000000000002000000001000000000000
..............................................................................TCG-CA---GAAGGGCG---TGTACGA...............................................................20113.00130000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000010000100000000000000000000001001001000000000000100000
....................TCAGGATGGCCGAGCGGTCTAAGG............................................................................................................................24413.0052000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000010000000000000000000100000000000020100000020112021200205210111001001000
.........................................................................................................................TGAGGGCGTGGGTTCGAAT............................19413.00520000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000030000010000000000000000000000000010000000000000001010000000000000000000000000000004000000010010000000000000000000130111001000000000000000000000000000000000000010000000000000010000000000022000011010000000015201002010000000305010
.........................ATGGCCGAGCGGTCTAAGGCGCCAGAC....................................................................................................................27412.75510000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000010000001000100000000000120000003000100200050000121031001031100220000600500
........................GATGGCCGAGCGGTCTAAGGCGC.........................................................................................................................23412.755100000000010000000000000000000000000000000000000000000000000000000000000000000000003000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000010001000000000000000000000000000100040001001131000000100112000052002000011600000
.........................ATGGCCGAGCGGTCTAAGG............................................................................................................................19412.75510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001021102000010000000000000000002000000000000000000000000000000000000000010000000100000000100000000000000000000000000000111000001101000000000000000000100000000000010000000000000000000100000000220000004001300000010000000006612000000000
....................TCAGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................25412.755100000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000101000100000000004000212101002001002500000
.......................GGATGGCCGAGCGGTCTA...............................................................................................................................18412.75510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000001000000010000000000000000000000000000000000000001000000000000000000000000010000000000000000000000000000000000000021030000001000000000001000000000000001000000001000000100000000000000000012572410102000100110001000001000000000310000
....................................................................................................................CTCTCTGAGGGCGTGGGTT.................................19312.673800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000002000010000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000001000000001000000000000000200000000010000000010000000000000000010000000000000000000000001103111020201100000001200000
.............................................................................................................TCTGGTCCTCTCTGAGGGCGTGGG...................................24312.67380000000000000000000000100000000000001000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000112103030200100000100000000000000000000000000000000000000000000000000000000000000000310100130101000000001000000000000000000000100000000000000000000000000003000000000000000000000000000100000100000001
..........................................................................................................................GAGGGCGTGGGTTCGAAT............................18412.50500000000000000000000000000000000000000000002000000101000000010000000000000000000000000000000001000000000000020000000000000000000000000000000010000100010000000000000000000000000001000000000000000000000000000000000000123500010502100000000000000000000000000000100000000000000100000100000000023000012000000300001000000000200000100000
........................................................G-GCAT--TCAG-TCTTGCCCT..........................................................................................18112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010011110000001400010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................CA---GAAGGGCG---TGTACGAGC.............................................................19112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100001010000100000000000100000000000000000010000000000000000000000000000000000000100010000100001100000000000000000000
.....................CAGGATGGCCGAGCGGTCTAA..............................................................................................................................21412.00480000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000110000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000000000000000000000000010100000000000000000100000000010000000000000000001000000000000000000000311100002000000221401021110003030100700000
.........AACA-----TGTCAGGATGGCCG........................................................................................................................................18112.00120000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000001000000000000000011000000000000000000000000011211000000000000001000000000000000000100000
droEug1
CGC--TCTCAACA-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-GCAT--TCAG-CTTTGCCCTTCT-CA---GAAGGGCG---T-TGTGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAAGTAT--------TSizeHit CountTotal NormTotal
No Reads
droBia1
AGC--TCGCAACG-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-A--T--ACAA-TCTTGCCCTTCT-CA---GGAGGGC-----GTGGGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--GA--------TSizeHit CountTotal NormTotal
No Reads
droTak1
CGC--TCGCAACG-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-GCAT--TCAG-TCTTGCCCTTCA-CA---GAAGGGC-----GTGCGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--GT--------TSizeHit CountTotal NormTotal
No Reads
droEle1
CGA--TTGCAACG-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-GCAT--TCTG-CTTTGCCCTTCG-CA---GAAGGGC-----GTGCGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--AT--------CSizeHit CountTotal NormTotal
No Reads
droRho1
TGA--TTGCAACG-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-GCAT--TCAG-CTTTGCCCTTCG-CA---GAAGGGT-----GTGTGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--AT--------CSizeHit CountTotal NormTotal
No Reads
droFic1
-GC--CCGCAAAAATAACTGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-ATCT--GAAA-TCTTGCTTTCCG-AA---GGAAAGT-----GTATGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAG--AA--------CSizeHit CountTotal NormTotal
No Reads
droKik1
CGC--TCGCAACG-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-GCGA--ACTG-TCTTGCCCTTCT-CA---GAAGGGCGG--TGTGCGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--GC--------TSizeHit CountTotal NormTotal
No Reads
droAna3
CGT--TCGCAACA-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-GCAA--AATG-TCTTGCCCTTCG-CA---GAAGGGTT---TGTGCGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--TA--------TSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................GTCAGGATGGCCGAGCGGTC.................................................................................................................................204610.00244013413329582203
...................GTCAGGATGGCCGAGCGG...................................................................................................................................184375.7515033809335271049
...................GTCAGGATGGCCGAGCGGTCTAAGG............................................................................................................................254296.25118579514621034
...................GTCAGGATGGCCGAGCGGTCTAAG.............................................................................................................................244277.75111122401291055
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCT...................264277.00110890351732943
...................GTCAGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................264212.50850140130061636
.......................GGATGGCCGAGCGGTCTAAG.............................................................................................................................204134.0053650003528
...................GTCAGGATGGCCGAGCGGTCTAAGGCC..........................................................................................................................274126.755072300077407
...................GTCAGGATGGCCGAGCGGTCTAAGGCGC.........................................................................................................................284108.75435810035391
......................AGGATGGCCGAGCGGTCTAAG.............................................................................................................................21499.0039670001388
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACT......................23485.0034013108924276
.......................GGATGGCCGAGCGGTCTAAGG............................................................................................................................21480.50322140307298
.......................GGATGGCCGAGCGGTCTAAGGC...........................................................................................................................22471.50286110025268
...................GTCAGGATGGCCGAGCGGT..................................................................................................................................19468.75275107601311138
........................GATGGCCGAGCGGTCTAAG.............................................................................................................................19466.5026610103261
...................GTCAGGATGGCCGAGCGGTCTA...............................................................................................................................22454.2521741105206
...................GTCAGGATGGCCGAGCGGTCT................................................................................................................................21450.5020260041191
......................AGGATGGCCGAGCGGTCTAAGG............................................................................................................................22443.7517540005166
...................GTCAGGATGGCCGAGCGGTCTAA..............................................................................................................................23435.2514171001132
...................GTCAGGATGGCCGAGCGGTCTAAGGCGCC........................................................................................................................29434.251370210013103
........................GATGGCCGAGCGGTCTAAGG............................................................................................................................20428.251136011897
......................AGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................23427.001086210495
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTC....................25423.509441300275
...........................................................................................................................AGGGCGTGGGTTCGAATCCC.........................20623.171391554841543
.....................CAGGATGGCCGAGCGGTCTAAG.............................................................................................................................22420.75835011373
....................................................................................................................................GTTCGAATCCCACTTCTGACACC--G..........241419.3627127100000
....................................................................................................................................GTTCGAATCCCACTTCTGA.................191417.0723912654114143
........................GATGGCCGAGCGGTCTAAGGC...........................................................................................................................21417.00682102459
......................AGGATGGCCGAGCGGTCTAAGGCC..........................................................................................................................24414.75594000055
............................................................................................................................GGGCGTGGGTTCGAATCCC.........................19613.838326492015
.....................CAGGATGGCCGAGCGGTCTAAGG............................................................................................................................23413.75557121539
...........................................................................................................................AGGGCGTGGGTTCGAATCCCA........................21612.67768171071420
...................GTCAGGATGGCCGAGCGT...................................................................................................................................18511.605843102210
............................................................................................................................GGGCGTGGGTTCGAATCC..........................18611.336834810124
......................................................................................................................................TCGAATCCCACTTCTGACACC--...........21149.6413585443102
........................................................................................................................................GAATCCCACTTCTGACACC--...........19179.5916381531001
...........................................................................................................................AGGGCGTGGGTTCGAATCC..........................1968.5051133021023
.......................GGATGGCCGAGCGGTCTAA..............................................................................................................................1948.50340000034
.....................CAGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................2448.253313200117
...........................................................................................................................AGGGCGTGGGTTCGAATC...........................1868.174925701115
......................AGGATGGCCGAGCGGTCTAAGGCGC.........................................................................................................................2548.00320000131
...................................................................................................................................GGTTCGAATCCCACTTCTGACACC--G..........25147.7110810430100
.......................................................................................................................................CGAATCCCACTTCTGACACC--...........20157.6011423863002
.....................CAGGATGGCCGAGCGGTCTAAGGCC..........................................................................................................................2547.00281000027
...................GTCAGGATGGCCGAGCG....................................................................................................................................1746.75270002700
....................................................................................................................................GTTCGAATCCCACTTCTGACA...............21146.7194242511241
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCACTTCT...................2746.50261300220
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCC.........................2246.00242173002
....................................................................................................................................GTTCGAATCCCACTTCTGACACC--...........23145.938320630000
............................................................................CTTCG-CA---GAAGGGTT---TGTGCGAGC.............................................................2415.005040010
...................GTCAGGATGGCCGAGCGGG..................................................................................................................................1945.00201400150
......................................CTAAGGCGCCAGACTCAAG-GC............................................................................................................2115.005041000
.....................CAGGATGGCCGAGCGGTC.................................................................................................................................1845.00201400204
...................................................................................A---GAAGGGTT---TGTGCGAGC.............................................................1815.005032000
..............................CGAGCGGTCTAAGGCGCCAGAC....................................................................................................................2244.75190000019
......................................................................................................................................TCGAATCCCACTTCTGACA...............19144.64654763117
.................................................................................................................................TGGGTTCGAATCCCACTTCTGACACC--...........26144.57642620000
..........................................................................................................................GAGGGCGTGGGTTCGAATCCC.........................2144.2517582011
.........................................................................................................................................AATCCCACTTCTGACACC--...........18204.25857752001
.....................................................................................................................................TTCGAATCCCACTTCTGACACC--...........22144.145810413004
..............................................................................TCG-CA---GAAGGGTT---TGTGC.................................................................1814.004031000
.........AACA-----TGTCAGGATGGCCGAGC.....................................................................................................................................2114.004110002
...............................................................................CG-CA---GAAGGGTT---TGTGCGAGC.............................................................2114.004040000
....................................................................................................................................GTTCGAATCCCACTTCTGAC................20143.935533150016
......................AGGATGGCCGAGCGGTCTAAGGCGCC........................................................................................................................2643.75150000015
.............................................................................................................................GGCGTGGGTTCGAATCCC.........................18203.657346240003
....................................................................................................................................GTTCGAATCCCACTTCTG..................18143.645127513015
......................AGGATGGCCGAGCGGTCTAA..............................................................................................................................2043.50140000014
.........................ATGGCCGAGCGGTCTAAGGC...........................................................................................................................2043.50141000211
............................................................................................................................GGGCGTGGGTTCGAATCCCACTTCT...................2543.50141310000
..................................................................................................................TCCTCTCTGAGGGCGTGGGT..................................2043.5014600008
.......................GGATGGCCGAGCGGTCTAAGGCGCC........................................................................................................................2543.50140100013
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTT.....................2443.5014600017
......................AGGATGGCCGAGCGGTCTA...............................................................................................................................1943.25130001012
..............................................................................TCG-CA---GAAGGGTT---TGTGCGAGC.............................................................2213.003010002
................................................................AATG-TCTTGCCCTTCG-CA---GAAGG............................................................................2313.003012000
...................................GGTCTAAGGCGCCAGACTCAAG-GC............................................................................................................2413.003030000
.........................ATGGCCGAGCGGTCTAAGG............................................................................................................................1943.0012200109
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCA........................2243.0012101352
..................................................................TG-TCTTGCCCTTCG-CA---GAAGG............................................................................2113.003001002
.........................ATGGCCGAGCGGTCTAAG.............................................................................................................................1843.00121000011
..........................TGGCCGAGCGGTCTAAGG............................................................................................................................18132.85373000421
.....................CAGGATGGCCGAGCGGTCTAAGGCGC.........................................................................................................................2642.7511101009
................................................................................................................GGTCCTCTCTGAGGGCGTGGGT..................................2242.75110000011
....................TCAGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................2542.75111100000
....................TCAGGATGGCCGAGCGGTCTAAGG............................................................................................................................2442.5010700012
....................TCAGGATGGCCGAGCGGTC.................................................................................................................................1942.5010800002
......................................................................................................................................TCGAATCCCACTTCTGACACC--G..........22142.50353500000
............................................................................................................................GGGCGTGGGTTCGAATCCCACT......................2242.50101000000
...................................................................................................................................GGTTCGAATCCCACTTCTGACACC--...........24142.503514210000
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCACTTC....................2642.5010130006
.......................GGATGGCCGAGCGGTCTAAGGCGC.........................................................................................................................2442.50100000010
............A-----TGTCAGGATGGCCGAGC.....................................................................................................................................1832.337131002
....................TCAGGATGGCCGAGCGGTCT................................................................................................................................2042.259100008
...................GTCAGGATGGCCGAGCGGTA.................................................................................................................................2042.259200007
.....................CAGGATGGCCGAGCGGTCTAA..............................................................................................................................2142.259200007
...............................................................................................................TGGTCCTCTCTGAGGGCGTGGGT..................................2342.259000009
.....................................................................................................................................TTCGAATCCCACTTCTGACACC--G..........23142.07292900000
............................................................AA--AATG-TCTTGCCCTTCG-CA---GAAGG............................................................................2512.002002000
.....................................TCTAAGGCGCCAGACTCAAG-GC............................................................................................................2212.002010001
........................................AAGGCGCCAGACTCAAG-GC............................................................................................................1912.002010001
........................GATGGCCGAGCGGTCTAAGGCGCC........................................................................................................................2442.008020015
........................GATGGCCGAGCGGTCTAA..............................................................................................................................1842.008200006
...........................................................CAA--AATG-TCTTGCCCTTCG-......................................................................................1912.002000002
.........................................................................................................................TGAGGGCGTGGGTTCGAATC...........................2042.008500012
.........AACA-----TGTCAGGATGGCCGAGCGGTC.................................................................................................................................2512.002110000
.........AACA-----TGTCAGGATGGCCGAGCGGT..................................................................................................................................2412.002200000
............................................................................................................................GGGCGTGGGTTCGAATCCCACTTC....................2442.008350000
......................AGGATGGCCGAGCGGTCT................................................................................................................................1842.008000107
............................................................AA--AATG-TCTTGCCCTTCG-CA---GAAG.............................................................................2412.002020000
.................................................GACTCAAG-GCAA--AATG-TCTTGCCC...........................................................................................2412.002020000
.....................CAGGATGGCCGAGCGGTCTAAGGCGCC........................................................................................................................2742.008000017
........................GATGGCCGAGCGGTCTAAGGCGC.........................................................................................................................2342.008000008
.....................CAGGATGGCCGAGCGGTCT................................................................................................................................1942.008000008
..........................................................................................................................GAGGGCGTGGGTTCGAATCC..........................2042.008220022
....................................GTCTAAGGCGCCAGACTCAAG-GC............................................................................................................2312.002110000
.............................................................................TTCG-CA---GAAGGGTT---TGTGCGAGC.............................................................2312.002020000
..................................................................TG-TCTTGCCCTTCG-CA---GAAGGGTT---......................................................................2412.002000002
droBip1
CGT--TCGCAACA-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-GCAA--AATG-TCTTACCCTTCG-CA---GAAGGGTG---TGTGCGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--TA--------TSizeHit CountTotal NormTotal
No Reads
dp5
GAT--TTGCAACG-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-ATATCAACAG-TCTTGCCCTTCC-CA---GAAGGGTCGTTTGTATGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--TC--------ASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCT...................2642083.0083320469356003141595216000
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCC...................264246.75987007980000000
...................GTCAGGATGGCCGAGCGGTC.................................................................................................................................204243.009721705782246181110
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTC....................254196.0078402321722369000
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACT......................234168.7567506267414404115000
...................GTCAGGATGGCCGAGCGG...................................................................................................................................184156.7562725901021318010
....................................................................................................................................GTTCGAATCCCACTTCTGA.................191347.6261905692032022012
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCTG..................27429.7511915142801421000
...................GTCAGGATGGCCGAGCGGT..................................................................................................................................19427.251090820041211000
...........................................................................................................................AGGGCGTGGGTTCGAATCCCA........................21621.6713001546332052000
............................................................................................................................GGGCGTGGGTTCGAATCCCACTTCT...................25419.5078052120050000
...................GTCAGGATGGCCGAGCGGTCTAAGG............................................................................................................................25418.25730265019016070
..........................................................ATATCAACAG-TCTTGCCCT..........................................................................................19115.00150250800000
...................GTCAGGATGGCCGAGCGGTCT................................................................................................................................21413.7555023001625000
...........................................................................................................................AGGGCGTGGGTTCGAATCCC.........................20613.50810211053240000
....................TCAGGATGGCCGAGCGGTC.................................................................................................................................19411.004404400000000
.............................................................................TTCC-CA---GAAGGGTCGTTTGTATGAG..............................................................25111.00110400002500
...................GTCAGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................26410.7543011633012530
..................................................................................................................TCCTCTCTGAGGGCGTGGGT..................................20410.254103120053000
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTT.....................2449.7539010180182000
...........................................................................................................................AGGGCGTGGGTTCGAATC...........................1868.6752031200415000
......................................................................................................................................TCGAATCCCACTTCTGACACC--...........21148.4311819976005000
...........................................................................................................................AGGGCGTGGGTTCGAATCC..........................1968.335003511049000
...................GTCAGGATGGCCGAGCGGTCTAAG.............................................................................................................................2447.503004203021000
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCACTTCT...................2747.503005120022000
........................................................................................................................................GAATCCCACTTCTGACACC--...........19157.33110052552100000
...................GTCAGGATGGCCGAGCGGTCTAAGGCC..........................................................................................................................2747.252905510018000
.............................................................................TTCC-CA---GAAGGGTCGTTTGTATG................................................................2317.0070700000000
.............................................................................TTCC-CA---GAAGGGTCGTTTGTATGAGC.............................................................2617.0071410001000
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCTGA.................2846.752701450017000
.....................CAGGATGGCCGAGCGGTC.................................................................................................................................1846.502602300030000
.........AACG-----TGTCAGGATGGCCGAGCGGTC.................................................................................................................................2516.0060300111000
...................GTCAGGATGGCCGAGCGGTCTAA..............................................................................................................................2346.002403001218000
......................................................................................................................................TCGAATCCCACTTCTGACAC..............20135.2368045812012000
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCTGAC................2945.002000712001000
......................................................................................................................................TCGAATCCCACTTCTGACA...............19134.545905700110000
............................................................................................................................GGGCGTGGGTTCGAATCCCACT......................2244.501801203210000
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCACT......................2444.50180620514000
....................................................................................................................................GTTCGAATCCCACTTCTG..................18134.235514720500000
..................................................................AG-TCTTGCCCTTCC-CA---GAAGG............................................................................2114.0040300100000
...................................................................................A---GAAGGGTCGTTTGTATGA...............................................................1914.0040000100021
...............................................................................CC-CA---GAAGGGTCGTTTGTATGAG..............................................................2314.0040000000031
..........................................................ATATCAACAG-TCTTGCCCTT.........................................................................................2014.0040020200000
...................GTCAGGATGGCCGAGCGGTCTAAGGCGCC........................................................................................................................2943.751500122001000
...................GTCAGGATGGCCGAGCGGTCTAAGGCGC.........................................................................................................................2843.50140152204000
..........................................................................................................................GAGGGCGTGGGTTCGAATCC..........................2043.501401110002000
....................................................................................................................CTCTCTGAGGGCGTGGGT..................................1843.25130210440011
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCCA........................2343.25130320206000
..........................................................................................................................GAGGGCGTGGGTTCGAATCCC.........................2143.25130830101000
............................................................................................................................GGGCGTGGGTTCGAATCCC.........................1963.171901250110000
............................................................................................................................GGGCGTGGGTTCGAATCCCA........................2063.171901720000000
...................GTCAGGATGGCCGAGCGGTCTA...............................................................................................................................2243.00120100506000
...........................................................TATCAACAG-TCTTGCCCT..........................................................................................1813.0030010200000
.............................................................................TTCC-CA---GAAGGGTCGTTTGTATGAA..............................................................2513.0030300000000
..................................................................AG-TCTTGCCCTTCC-CA---GAAGGG...........................................................................2213.0030100200000
.........AACG-----TGTCAGGATGGCCGAGC.....................................................................................................................................2113.0030010010001
.....................................................................TCTTGCCCTTCC-CA---GAAGG............................................................................1923.0060130100001
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCA........................2243.00120210702000
.............................................................................TTCC-CA---GAAGGGTCGTTTGTAT.................................................................2213.0030100000020
...................................................................................A---GAAGGGTCGTTTGTATGAGC.............................................................2113.0030000100020
..................................................................................CA---GAAGGGTCGTTTGTATGAGC.............................................................2213.0030000000021
.....................................................................................................................................TTCGAATCCCACTTCTGA.................18132.853703500200000
....................................................................................................................................GTTCGAATCCCACTTCTGAC................20132.693502941001000
....................................................................................................................................GTTCGAATCCCACTTCTGACACC--...........23132.6935020113001000
............................................................................................................................GGGCGTGGGTTCGAATCC..........................1862.671601501000000
............................................................................................................................GGGCGTGGGTTCGAATCCCACTTC....................2442.50100415000000
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCACTTC....................2642.50100242200000
....................TCAGGATGGCCGAGCGGT..................................................................................................................................1842.501001000000000
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCCACT......................2542.50100120016000
...................GTCAGGATGGCCGAGCGT...................................................................................................................................1852.401201200000000
...................................................................................................................................GGTTCGAATCCCACTTCTGA.................20132.383103100000000
....................................................................................................................................GTTCGAATCCCACTTCTGACA...............21132.383103010000000
..................................................................................................................TCCTCTCTGAGGGCGTGGGTT.................................2142.2590801000000
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCC.........................2242.2590500004000
...........................................................................................GGTCGTTTGTATGAGCGTTCTGGTCCT..................................................2712.0020110000000
......................AGGATGGCCGAGCGGTCTAAGG............................................................................................................................2242.0080100421000
.........AACG-----TGTCAGGATGGCCGAGCGGT..................................................................................................................................2412.0020000100001
.................................................GACTCAAG-ATATCAACAG-T..................................................................................................1912.0020100100000
............................................................ATCAACAG-TCTTGCCCTTCC-CA---GAAG.............................................................................2612.0020020000000
..................................................................................CA---GAAGGGTCGTTTGTATGAG..............................................................2112.0020000000011
............................................................................................................TTCTGGTCCTCTCTGAGGGCGTGGG...................................2542.0080410200010
.............................................................................TTCC-CA---GAAGGGTCGTTTGTA..................................................................2112.0020100100000
........................................................G-ATATCAACAG-TCTTGCCCT..........................................................................................2012.0020110000000
..............................................................................TCC-CA---GAAGGGTCGTTTGTATGAGC.............................................................2512.0020010100000
................................................................................C-CA---GAAGGGTCGTTTGTATGAG..............................................................2212.0020000000020
.....................CAGGATGGCCGAGCGGTCTAAGG............................................................................................................................2342.0080110402000
.................................................................................................TTGTATGAGCGTTCTGGTCCT..................................................2112.0020100001000
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCCAC.......................2442.0080310103000
..................................................................................................................TCCTCTCTGAGGGCGTGGG...................................1942.0080800000000
...................................................................G-TCTTGCCCTTCC-CA---GAAGGGTC.........................................................................2312.0020011000000
...........................................................................................GGTCGTTTGTATGAGCGTTCTGGTCCTCT................................................2912.0020020000000
.......................................................................................................................................CGAATCCCACTTCTGACACC--...........20141.792501860010000
.............................................................................................................................GGCGTGGGTTCGAATCCCACTT.....................22131.772302300000000
............................................................................................................TTCTGGTCCTCTCTGAGGGCGTGG....................................2441.7570700000000
......................AGGATGGCCGAGCGGTCTAAG.............................................................................................................................2141.7570100015000
droPer2
GAT--TTGCAACG-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-ATATCAACAG-TCTTGCCCTTCC-CA---GAAGGGTCGTTTGTATGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--TC--------ASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCT...................263291.008730559213351128
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACT......................23396.33289042214105126
...................GTCAGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................26375.00225170800047
...................GTCAGGATGGCCGAGCGGTC.................................................................................................................................20361.6718542371833100
...................GTCAGGATGGCCGAGCGG...................................................................................................................................18331.6795172816736
...................GTCAGGATGGCCGAGCGGTCTAAGG............................................................................................................................25331.009385111068
...................GTCAGGATGGCCGAGCGGTCTAAGGCGCC........................................................................................................................29329.00878501001
...................GTCAGGATGGCCGAGCGGTCTAAG.............................................................................................................................24324.007213280148
............................................................................................................................GGGCGTGGGTTCGAATCCCACTTCT...................25323.33700700000
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTC....................25318.335503702214
...........................................................................................................................AGGGCGTGGGTTCGAATCCCA........................21515.0075310711638
...................GTCAGGATGGCCGAGCGGT..................................................................................................................................19314.67440643922
...................GTCAGGATGGCCGAGCGGTCT................................................................................................................................21314.00425012628
....................................................................................................................................GTTCGAATCCCACTTCTGA.................191313.8518011145130110
...................GTCAGGATGGCCGAGCGGTCTAAGGCGC.........................................................................................................................28313.334028100011
.....................................................................................................ATGAGCGTTCTGGTCCTC.................................................18113.00131300000
...................GTCAGGATGGCCGAGCGGTCTAAGGCC..........................................................................................................................27310.33314000027
...........................................................................................................................AGGGCGTGGGTTCGAATCCC.........................2059.604801301826
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCTG..................2738.00240180132
...................GTCAGGATGGCCGAGCGGTCTA...............................................................................................................................2237.33220110218
...................GTCAGGATGGCCGAGCGGTCTAA..............................................................................................................................2336.33190031213
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCACTTCT...................2736.00180100017
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTT.....................2436.0018050076
...........................................................................................................................AGGGCGTGGGTTCGAATCC..........................1956.00300500619
..................................................................................................................TCCTCTCTGAGGGCGTGGGT..................................2035.6717011555
..........................................................................................................................GAGGGCGTGGGTTCGAATC...........................1935.67170200015
..............................................................................................CGTTTGTATGAGCGTTCTGGTCCT..................................................2415.005500000
......................................................................................................................................TCGAATCCCACTTCTGACACC--...........21134.15548460000
...........................................................................................................................AGGGCGTGGGTTCGAATC...........................1854.00200400313
............................................................................CTTCC-CA---GAAGGGTCGTTTGTATGAGC.............................................................2714.004400000
....................................................................................................................................GTTCGAATCCCACTTCTG..................18133.694831115010
..............................CGAGCGGTCTAAGGCGCCAGACTC..................................................................................................................2433.67111100000
......................AGGATGGCCGAGCGGTCTAAGG............................................................................................................................2233.6711012116
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCA........................2233.3310050014
..........................................................................................................................GAGGGCGTGGGTTCGAATCC..........................2033.33100000010
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCACT......................2433.3310010009
.................................................................................................TTGTATGAGCGTTCTGGTCCT..................................................2113.003300000
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCCACTTCT...................2833.009000009
..........................................................................................GGGTCGTTTGTATGAGCGTTCTGGTCCT..................................................2813.003300000
.............................................................................TTCC-CA---GAAGGGTCGTTTGTATGAG..............................................................2513.003030000
..........................................................................................................................GAGGGCGTGGGTTCGAATCCC.........................2133.009011007
..................................................................AG-TCTTGCCCTTCC-CA---GAAGG............................................................................2113.003012000
........................................................................................................AGCGTTCTGGTCCTCTCTG.............................................1932.678710000
........................GATGGCCGAGCGGTCTAAG.............................................................................................................................1932.678013004
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCCA........................2332.337001105
.........................................................................................................................TGAGGGCGTGGGTTCGAATC...........................2032.337000007
............................................................................................................................GGGCGTGGGTTCGAATCCC.........................1952.2011062012
..............................CGAGCGGTCTAAGGCGCCAGACTCAAG-..............................................................................................................2732.006600000
....................................GTCTAAGGCGCCAGACTCAAG-AGC...........................................................................................................2412.002200000
...........................................................................................................GTTCTGGTCCTCTCTGAGG..........................................1932.006510000
.................................................................................................TTGTATGAGCGTTCTGGTC....................................................1912.002200000
................................................................................................TTTGTATGAGCGTTCTGGTCCT..................................................2212.002200000
..................................................................AG-TCTTGCCCTTCC-CA---GAAG.............................................................................2012.002002000
........................................................G-ATATCAACAG-TCTTGCCCT..........................................................................................2012.002200000
.................................................................................................TTGTATGAGCGTTCTGGTCCC..................................................2112.002200000
....................................................................................................................CTCTCTGAGGGCGTGGGT..................................1832.006012021
...................................................................................................GTATGAGCGTTCTGGTCCTCTCTGAGG..........................................2712.002101000
...................GTCAGGATGGCCGAGCGT...................................................................................................................................1841.757120121
....................................................................................................................................GTTCGAATCCCACTTCTGAC................20131.69228130001
.....................CAGGATGGCCGAGCGGTCTAAGG............................................................................................................................2331.675023000
...................GTCAGGATGGCCGAGCGGG..................................................................................................................................1931.675020003
.........................................................................................................................TGAGGGCGTGGGTTCGAATCC..........................2131.675010004
........................GATGGCCGAGCGGTCTAAGG............................................................................................................................2031.675001004
...........................................................................................................................AGGGCGTGGGTTCGAATCCCAC.......................2251.608000161
....................................................................................................................................GTTCGAATCCCACTTCTGACACC--...........23121.58191180000
.......................................................................................................................................CGAATCCCACTTCTGACACC--...........20131.54201532000
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCACTTC....................2631.334000004
......................AGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................2331.334201100
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCCACTTC....................2731.334100003
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCCACT......................2531.334010003
............................................................................................................................GGGCGTGGGTTCGAATCCCACT......................2231.334040000
........................GATGGCCGAGCGGTCTAAGGC...........................................................................................................................2131.334202000
......................AGGATGGCCGAGCGGTCTAAG.............................................................................................................................2131.334110101
.....................CAGGATGGCCGAGCGGTC.................................................................................................................................1831.334000031
...................GTCAGGATGGCCGAGCGGTCC................................................................................................................................2131.334000004
......................................................................................................................................TCGAATCCCACTTCTGACAC..............20131.31170160001
....................................................................................................................................GTTCGAATCCCACTTCTGACA...............21131.31171142000
.........................................................................................................................................AATCCCACTTCTGACACC--...........18171.18201162100
.....................................................................................................................................TTCGAATCCCACTTCTGACACC--...........22121.0813931000
........................................................................................................................................GAATCCCACTTCTGACACC--...........19141.07152121000
.............................................................................TTCC-CA---GAAGGGTCGTTTGTATGAGC.............................................................2611.001010000
............................................................................CTTCC-CA---GAAGGGTCGTT......................................................................1811.001100000
..........................................................ATATCAACAG-TCTTGCCCTTCC-CA---.................................................................................2411.001010000
............................................................................................................................GGGCGTGGGTTCGAATCCCACTT.....................2331.003030000
......................................................................CTTGCCCTTCC-CA---GAAGGGTCGTT......................................................................2411.001010000
........................................................................................AAGGGTCGTTTGTATGAGC.............................................................1911.001001000
......................................CTAAGGCGCCAGACTCAAG-A.............................................................................................................2011.001001000
.................................................GACTCAAG-ATATCAACAG-TCTTGCCCT..........................................................................................2711.001010000
.........AACG-----TGTCAGGATGGCCGAGCGGT..................................................................................................................................2411.001010000
...........................................................................................GGTCGTTTGTATGAGCGTTCTGGTC....................................................2511.001010000
.............................................................................TTCC-CA---GAAGGGTCGTTTGTATGAGAA............................................................2711.001100000
..............................................................................................CGTTTGTATGAGCGTTCTGGTCCG..................................................2411.001100000
............................................................ATCAACAG-TCTTGCCCTTCC-CA---GAAGG............................................................................2711.001010000
....................................................................................................TATGAGCGTTCTGGTCCTCTCTGAG...........................................2511.001010000
..............................................................................TCC-CA---GAAGGGTCGTTTGTATGAG..............................................................2411.001010000
............................................................................................................TTCTGGTCCTCTCTGAGGG.........................................1931.003120000
............................................................................................................TTCTGGTCCTCTCTGAGGGCGTGG....................................2431.003120000
.................................................GACTCAAG-ATATCAACAG-T..................................................................................................1911.001001000
........................................AAGGCGCCAGACTCAAG-A.............................................................................................................1811.001001000
.................................................................................................TTGTATGAGCGTTCTGGTCC...................................................2011.001100000
...............................................................................................GTTTGTATGAGCGTTCTGGTCCT..................................................2311.001100000
.......................GGATGGCCGAGCGGTCTAAG.............................................................................................................................2031.003010101
...............................................CAGACTCAAG-ATATCAACA.....................................................................................................1911.001100000
...................................................................G-TCTTGCCCTTCC-CA---GAAGG............................................................................2011.001001000
.....................CAGGATGGCCGAGCGGTCTAAGGCGC.........................................................................................................................2631.003201000
............................................................................................................TTCTGGTCCTCTCTGAGG..........................................1831.003300000
...................GTCAGGATGGCCGAGCGA...................................................................................................................................1831.003010011
...............................................................................................................TGGTCCTCTCTGAGGGCGTGGGT..................................2331.003003000
..........................................................ATATCAACAG-TCTTGCCC...........................................................................................1811.001100000
......................................................................................................................................TCGAATCCCACTTCTGACACC--G..........22141.00141130000
............................................................................................................TTCTGGTCCTCTCTGAGGGCGTG.....................................2331.003021000
.....................................................................................................................TCTCTGAGGGCGTGGGTT.................................1831.003111000
.......................................................................................GAAGGGTCGTTTGTATGAGCGT...........................................................2211.001000001
...............................................................................CC-CA---GAAGGGTCGTTTGTATGAG..............................................................2311.001000001
...............................................CAGACTCAAG-ATATCAAC......................................................................................................1811.001100000
..................................................................................................TGTATGAGCGTTCTGGTCCT..................................................2011.001100000
................................................AGACTCAAG-ATATCAACAG-T..................................................................................................2011.001001000
...................................................................G-TCTTGCCCTTCC-CA---GAAG.............................................................................1911.001001000
.............................................................................TTCC-CA---GAAGGGTCGTTTGTATG................................................................2311.001010000
...........................................................TATCAACAG-TCTTGCCCTTCC-CA---.................................................................................2311.001010000
............................................................................................GTCGTTTGTATGAGCGTTCTGGTC....................................................2411.001100000
......................AGGATGGCCGAGCGGTCT................................................................................................................................1831.003000030
......................................................................CTTGCCCTTCC-CA---GAAGGGTCG........................................................................2211.001010000
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCC.........................2231.003000003
......................................CTAAGGCGCCAGACTCAAG-AGC...........................................................................................................2211.001100000
..........................................................ATATCAACAG-TCTTGCCCT..........................................................................................1911.001100000
.............................................................................TTCC-CA---GAAGGGTCGTTTG....................................................................1911.001010000
...................................................................................A---GAAGGGTCGTTTGTATGAGC.............................................................2111.001100000
.....................CAGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................2431.003011100
.............................................................................TTCC-CA---GAAGGGTCGTTTGTATGA...............................................................2411.001100000
...................................................................G-TCTTGCCCTTCC-CA---GAAGGGTC.........................................................................2311.001100000
.....................................................................TCTTGCCCTTCC-CA---GAAGGGTCGTT......................................................................2511.001010000
...................................................CTCAAG-ATATCAACAG-TCTTGCCCTTCC-......................................................................................2811.001010000
...........................................................................................GGTCGTTTGTATGAGCGTTCTGGTCCC..................................................2711.001100000
.....................................................................TCTTGCCCTTCC-CA---GAAGG............................................................................1911.001010000
..........................................................ATATCAACAG-TCTTGCCCTTCC-C.....................................................................................2311.001010000
...................GTCAGGATGGCCGAGCGGTCTAAGA............................................................................................................................2531.003000003
..........................................................ATATCAACAG-TCTTGCCCTTCC-CA---GA...............................................................................2611.001010000
............................................................ATCAACAG-TCTTGCCCTTCC-CA---GAAG.............................................................................2611.001010000
.......................................................................................................................................CGAATCCCACTTCTGACAAA--...........2040.753030000
...................GTCAGGATGGCCGAGCGC...................................................................................................................................1830.672010010
....................TCAGGATGGCCGAGCGGTC.................................................................................................................................1930.672010010
.......................GGATGGCCGAGCGGTCTAAGGC...........................................................................................................................2230.672100001
........................GATGGCCGAGCGGTCTAAGGCGCCA.......................................................................................................................2530.672101000
droWil2
AACCATCGCAACA-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-ATGA--TAAG-TCTTGCCTTTCA-TA---GAAAGGTG----GTATGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--AT--------TSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...................GTCAGGATGGCCGAGCGGTCTAAGGCC..........................................................................................................................277458.143207067872254160
...................GTCAGGATGGCCGAGCGGTC.................................................................................................................................207289.14202413528694321477
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCT...................266283.8317031531443121301
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACT......................236262.001572144601481346
...................GTCAGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................267157.57110320977206387224
...................GTCAGGATGGCCGAGCGG...................................................................................................................................18799.146941153344378124
...................GTCAGGATGGCCGAGCGGTCTAAGG............................................................................................................................25782.14575296126173178
...................GTCAGGATGGCCGAGCGGTCTAAGGCGC.........................................................................................................................28765.144564219323819
...................GTCAGGATGGCCGAGCGGTCTAAG.............................................................................................................................24763.86447031111139166
..........................................................ATGA--TAAG-TCTTGCCTTTCA-TA---GAAAGG...........................................................................28150.0050001490
...........................................................................................................................AGGGCGTGGGTTCGAATCCCA........................21940.78367489293170
...........................................................................................................................AGGGCGTGGGTTCGAATCCC.........................20940.5636531814637161
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTC....................25638.1722912650170
.........AACA-----TGTCAGGATGGCCGAGC.....................................................................................................................................21230.0060613473
....................................................................................................................................GTTCGAATCCCACTTCTGA.................191425.7136015197439114
..............................................................................TCA-TA---GAAAGGTG----GTATGAGC.............................................................21125.0025103201
...................GTCAGGATGGCCGAGCGGTCTA...............................................................................................................................22724.86174341817132
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCTG..................27622.8313779651037
...........................................................................................................................AGGGCGTGGGTTCGAATCC..........................19922.11199018727102
.....................CAGGATGGCCGAGCGGTCTAAGGCC..........................................................................................................................25719.5713705337623
...................GTCAGGATGGCCGAGCGGTCTAAGGCGCC........................................................................................................................29719.4313612082411
......................AGGATGGCCGAGCGGTCTAAGG............................................................................................................................22716.4311526293048
...............................................................................CA-TA---GAAAGGTG----GTATGAGC.............................................................20115.0015100122
...................GTCAGGATGGCCGAGCGGTCT................................................................................................................................21714.86104410112158
...................GTCAGGATGGCCGAGCGGTCTAA..............................................................................................................................23714.86104010191956
.....................CAGGATGGCCGAGCGGTCTAAG.............................................................................................................................22714.5710206442329
.....................CAGGATGGCCGAGCGGTCTAAGG............................................................................................................................23714.43101016372127
......................AGGATGGCCGAGCGGTCTAAG.............................................................................................................................21713.009103182446
...................GTCAGGATGGCCGAGCGGT..................................................................................................................................19712.5788139161319
.....................CAGGATGGCCGAGCGGTC.................................................................................................................................18711.718211296333
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCA........................22610.336208201618
.............................................................................TTCA-TA---GAAAGGTG----GTATGAGC.............................................................22110.001010090
........................GATGGCCGAGCGGTCTAAGG............................................................................................................................2079.296506182516
......................AGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................2379.29653332234
.........AACA-----TGTCAGGATGGCCGA.......................................................................................................................................1929.0018005130
..........ACA-----TGTCAGGATGGCCGAGC.....................................................................................................................................2039.0027500166
......................AGGATGGCCGAGCGGTCTAAGGCC..........................................................................................................................2478.8662028484
...........................................................................................................................AGGGCGTGGGTTCGAATC...........................1898.007201626624
.......................GGATGGCCGAGCGGTCTAAGG............................................................................................................................2177.715404131819
........................GATGGCCGAGCGGTCTAAG.............................................................................................................................1977.715400101430
.......................GGATGGCCGAGCGGTCTAAG.............................................................................................................................2077.435206101323
......................................................................................................................................TCGAATCCCACTTCTGACA...............19147.29102491106
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCACT......................2467.1743015631
............................................................................TTTCA-TA---GAAAGGTG----GTATGAGC.............................................................2317.00700070
.................................................GACTCAAG-ATGA--TAAG-TCT................................................................................................1917.00700070
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCACTTCT...................2766.8341012533
........................................................................................................................CTGAGGGCGTGGGTTCGAATCCCA........................2466.83411027130
......................................................................................................................................TCGAATCCCACTTCTGACAC..............20146.29881164229
...........................................................................................GGTG----GTATGAGCGTTCTGGTCCT..................................................2316.00600150
...................GTCAGGATGGCCGAGCGT...................................................................................................................................1876.0042432042
...........................................................................................GGTG----GTATGAGCGTTCTGGTCCTC.................................................2416.00600150
.........AACA-----TGTCAGGATGGCCGAGCG....................................................................................................................................2226.001220082
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCCACT......................2565.83351141118
............................................................................................................................GGGCGTGGGTTCGAATCC..........................1895.78520411010
.....................CAGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................2475.43382108810
..............................................................................TCA-TA---GAAAGGTG----GTATG................................................................1815.00500050
............................................................................TTTCA-TA---GAAAGGTG----GTAT.................................................................1915.00500140
...................GTCAGGATGGCCGAGCGGTCTAG..............................................................................................................................2374.86340111022
..........................................................................................................................GAGGGCGTGGGTTCGAATCCC.........................2164.67280412111
....................................................................................................................................GTTCGAATCCCACTTCTGACA...............21144.6465456023
...................................................................................................................................GGTTCGAATCCCACTTCTGACACC--G..........25144.5063063000
............................................................................................................................GGGCGTGGGTTCGAATCCC.........................1994.22380150320
....................TCAGGATGGCCGAGCGGTC.................................................................................................................................1974.1429021107
........................GATGGCCGAGCGGTCTAAGGC...........................................................................................................................2174.1429143156
..................................................................................TA---GAAAGGTG----GTATGAGC.............................................................1814.00400040
................................................AGACTCAAG-ATGA--TAAG-T..................................................................................................1814.00400040
...............................................................................CA-TA---GAAAGGTG----GTATGAG..............................................................1914.00400040
.............................................................................TTCA-TA---GAAAGGTG----GTAT.................................................................1814.00400040
..........................................................................................AGGTG----GTATGAGCGTTCTGGTCCTC.................................................2514.00400040
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCCA........................2364.00240110121
................................................................................A-TA---GAAAGGTG----GTATGAGC.............................................................1914.00400040
..........................................................ATGA--TAAG-TCTTGCCTTT.........................................................................................1814.00400040
.........AACA-----TGTCAGGATGGCCGAGCGGTC.................................................................................................................................2524.00811042
..................................................ACTCAAG-ATGA--TAAG-TCT................................................................................................1814.00400040
....................................................................................................................................GTTCGAATCCCACTTCTGACACC--G..........24143.9355055000
....................................................................................................................................GTTCGAATCCCACTTCTG..................18143.6451637071
.......................GGATGGCCGAGCGGTCTAAGGC...........................................................................................................................2273.572555069
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTT.....................2463.5021010911
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCCACTTCT...................2863.33200001010
...........CA-----TGTCAGGATGGCCGAGC.....................................................................................................................................1933.331021061
..........ACA-----TGTCAGGATGGCCGA.......................................................................................................................................1833.3310000100
...................GTCAGGATGGCCGAGCGGG..................................................................................................................................1973.1422011182
.....................CAGGATGGCCGAGCGGTCTAAGGCGC.........................................................................................................................2673.1422006124
...............................................CAGACTCAAG-ATGA--TAAG-T..................................................................................................1913.00300120
................................................AGACTCAAG-ATGA--TAAG-TCT................................................................................................2013.00300030
...........................................................................................GGTG----GTATGAGCGTTCTGGT.....................................................2013.00300120
.............................................................................TTCA-TA---GAAAGGTG----GTATG................................................................1913.00300030
......................AGGATGGCCGAGCGGTCTAAGGCGC.........................................................................................................................2573.0021018102
..........................................................................................AGGTG----GTATGAGCGTTCTGGTCCTCT................................................2613.00300120
............................................................................................GTG----GTATGAGCGTTCTGGTCCTC.................................................2313.00300120
........................GATGGCCGAGCGGTCTAAGGCC..........................................................................................................................2272.571800981
.....................CAGGATGGCCGAGCGGTCTAAGGCGCC........................................................................................................................2772.571833633
.......................GGATGGCCGAGCGGTCTA...............................................................................................................................1872.5718011313
.........AACA-----TGTCAGGATGGCCGAG......................................................................................................................................2022.50520030
.........AACA-----TGTCAGGATGGCCGAGCGGT..................................................................................................................................2422.50500050
.........AACA-----TGTCAGGATGGCCGAGCGGTCT................................................................................................................................2622.50510040
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCCACTTC....................2762.5015001104
..........ACA-----TGTCAGGATGGCCGAGCGGTC.................................................................................................................................2432.33702050
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCC.........................2262.331401733
..........ACA-----TGTCAGGATGGCCGAGCGG...................................................................................................................................2232.33711041
...................GTCAGGATGGCCGAGCGGTCTAAGGGC..........................................................................................................................2772.2916005110
.........................ATGGCCGAGCGGTCTAAGG............................................................................................................................1972.291601690
...................GTCAGGATGGCCGAGCGGTCTAAGGCGCCA.......................................................................................................................3072.2916001510
......................AGGATGGCCGAGCGGTCTA...............................................................................................................................1972.2916001213
.......................................................................................................................................CGAATCCCACTTCTGACAAA--...........2092.2220416000
....................................................................................................................................GTTCGAATCCCACTTCTGAC................20142.2131325111
......................................................................................................................CTCTGAGGGCGTGGGTTCGAATCCCA........................2662.171300670
droVir3
GGT--TTGCCACG-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAGAGCAT--TTAACTCTTGCCTTTCA-TA---GAAAGGT-----GTGTGAGAATTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--AT--------ASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...................GTCAGGATGGCCGAGCGG...................................................................................................................................185173.808698159482152417241663683110000053062222422917727131129121711310000000200100001058917190
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACT......................235165.8082912930112314028643000461171261130042219204201631631120100000000000100100218340
...................GTCAGGATGGCCGAGC.....................................................................................................................................165132.406620000000000000000000000000000000000000000102020202511565528165057010464
...................GTCAGGATGGCCGAGCGGTC.................................................................................................................................205121.806092224621161832422511212215621497210302116937612521231514000000000000000101051531193
....................................................................................................................................GTTCGAATCCCACTTCTGA.................1912109.921319151367723038081110337261281054912120010042615841657100181691100000000000000000000611471
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCT...................26594.60473017720002271311000238121442361052700120000200050000000000000000000000028161
...................GTCAGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................26584.6042317013012110007010000100000000010100100104312000000100000111031031504317
...................GTCAGGATGGCCGAGCGGT..................................................................................................................................19579.80399209117210700104510441968020009742716712159130000000000000000000267199
..............................CGAGCGGTCTAAGGCGCCT.......................................................................................................................19766.2946430000000100010014001000000000101100000000000000000000000000004500
...........................................................................................................................AGGGCGTGGGTTCGAATCCCA........................21864.75518001301211706613010254333140803200022353411161540000000000000000000076270
...........................................................................................................................AGGGCGTGGGTTCGAATCCC.........................20859.754780019207414533158617320036181101100622505110413000000000000000000015330
............................................................................................................TTCTGGTCCTCTCTGAGGGCGTGGG...................................25556.402823000109111060001001101002162320241708131423722272000000000000000000001010
...................GTCAGGATGGCCGAGCGGTCTAAGG............................................................................................................................25537.601882339010421351210010001000100010021603424200000000000000000000170394
...........................................................................................................................AGGGCGTGGGTTCGAATCC..........................19833.3826701700031126694331200131151101100223104110200000000000000000000002140
..................................................................................................................TCCTCTCTGAGGGCGTGGGT..................................20527.801390020011616520000220519261024241337250000000200000100000010000000050
............................................................................................................TTCTGGTCCTCTCTGAGGGCGTGGGT..................................26524.6012320102021140100000020000102119301115015234183000000000000000000000010
...................GTCAGGATGGCCGAGCGGTCTAAG.............................................................................................................................24521.60108221000122214108010010030000000250301012401000000000000000000011263
...................GTCAGGATGGCCGAGCG....................................................................................................................................17517.80890000000000000000000000000000000000000000000000000001002004209071
..........................TGGCCGAGCGGTCTAAGGC...........................................................................................................................191217.332081072000095001203344261026011280000006002131040100000000000000000000030
.......................GGATGGCCGAGCGGTCTAAG.............................................................................................................................20516.608362000001311461100000000021141126070010001100000000000000000002090
......................................................................................................................................TCGAATCCCACTTCTGACACC--...........211214.4217351594600110000008519530450010010100000000000000000000000010200140
....................TCAGGATGGCCGAGC.....................................................................................................................................15513.80690000000000000000000000000000000000000000000010001001010201200060
..................................................................................................................TCCTCTCTGAGGGCGTGGG...................................19513.606800400023210340000000000001001000000100000000000100000000000000000
...........................................................................................................................AGGGCGTGGGTTCGAATC...........................18813.0010400510303114500000112001000000021020000000100000000000000000000250
..........................TGGCCGAGCGGTCTAAGG............................................................................................................................181211.6714000400001231710101018451112600000080180100300000000000000000000000240
......................AGGATGGCCGAGCGGTCTAAG.............................................................................................................................21511.60580001000262911200000200000000030100100000000000000000000000000270
....................................................................................................................................GTTCGAATCCCACTTCTG..................181211.50138910712010410000110101002000000013432180210000000000000000000000000
..........ACG-----TGTCAGGATGGCCGAGC.....................................................................................................................................20111.0011000000000020000000000000001000000000101000000000000000000000006
..........ACG-----TGTCAGGATGGCCGAGCGGTCT................................................................................................................................25111.0011000000001101200000000000000020000000001000000000000000000000003
......................................................................................................................................TCGAATCCCACTTCTGACACC--C..........221310.23133011000000000002084152321025100000000000000001100000000000000000000300
...................GTCAGGATGGCCGAGCGGTCTAAGGCC..........................................................................................................................27510.20510028000301000000000000000000000000000000000000000000000000000370
............................................................................................................TTCTGGTCCTCTCTGAGGGCGTGG....................................2459.6048003001002020000000100001243502121146121100000000000000000000200
........................GATGGCCGAGCGGTCTAAG.............................................................................................................................1959.0045002000086810130000110000100001030200000100000000000000000002040
......................................................................................................................................TCGAATCCCACTTCTGACA...............19128.751053943000000000009502750590000021000000000000000000000000000000410
...................GTCAGGATGGCCGAGCGGTCTAAGGCGC.........................................................................................................................2858.00400109001230100000010000000000000000001000000000000000000000010191
............................................................................................................TTCTGGTCCTCTCTGAGGGCGTG.....................................2358.00400000001020100000011100104351011022010110000000000000000000000100
..........ACG-----TGTCAGGATGGCCGAGCGGTCTAA..............................................................................................................................2718.008000000000000100000000000000010000000000000000000000000000000006
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCTG..................2757.20360010300090300000114020000000000000001000000000000000000000000020
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCC.........................2257.2036200000169150000000100000001000000000000000000000000000000001081
...............................................................................................................TGGTCCTCTCTGAGGGCGTGGG...................................2256.40320010000030000001030000011131022030000000000000000000000000000100
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTT.....................2456.4032005001030620001224101110000000000000000000000000000000000000020
....................................................................................................................................GTTCGAATCCCACTTCTGACA...............21126.087325340000000000000000000100010000012221010000000000000000000002019
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTC....................2556.0030004700051300001400000000000000000000000000000000000000000000014
...................GTCAGGATGGCCGAGCGGTCTAAGGCGCC........................................................................................................................2956.0030510800000000000000000000000000000000000000000100010000000003047
.............................................................................TTCA-TA---GAAAGGT-----GTGTGA...............................................................1916.006000000000000000000000000000000000000000000000000000000000005010
..........ACG-----TGTCAGGATGGCCGAGCGGTCTA...............................................................................................................................2616.006000000001010000000000001001000000001000000000000000000000000001
....................TCAGGATGGCCGAGCGGT..................................................................................................................................1855.80290010000000000000000000000000000000000000000000000000000000001027
......................AGGATGGCCGAGCGGTCTAAGG............................................................................................................................2255.80290101000141310100001000000010000010000100000000000000000000001020
...................GTCAGGATGGCCGAGCGGTCT................................................................................................................................2155.6028001200001400000102102010000011310010000000000000000000000004110
...................GTCAGGATGGCCGAGCGGTCTA...............................................................................................................................2255.6028210100001110001001002000002010010100000100000000000000000004061
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCA........................2255.6028003000085110001000000000000011000020100000000000000000000001030
.........................................................................................................................TGAGGGCGTGGGTTCGAATC...........................2055.4027000002046060000001000000001000100000000000000000000000000000060
...................GTCAGGATGGCCGAGCGGG..................................................................................................................................1955.2026105001030100000002000006010021000000000000000000000000000102000
...................................................................................................GTGTGAGAATTCTGGTCCTCTCTGAGGGCGTGGGT..................................3515.005000000000000000000000000000000000000000000000000011100110000000
....................................................................................................................................GTTCGAATCCCACTTCTGACACC--...........23125.006035910000000000000000000000000010000000000000000000000000200001029
..........ACG-----TGTCAGGATGGCCGAG......................................................................................................................................1925.0010000000200000000000000000011020020000000000000000000000000000002
................................................................................................................GGTCCTCTCTGAGGGCGTGGG...................................2154.8024000000202040000002010000103203130000000000000000000000000000000
......................AGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................2354.6023200100082000010100000000000000000000000000000000000000000003050
............................................................................................................TTCTGGTCCTCTCTGAGGGCGTGGGTT.................................2754.6023000000000000000101010000101103002064110000000000000000000000000
....................................................................................................................................GTTCGAATCCCACTTCTGAC................20124.58551218603020200000001000000000002140230100000000000000000000000007
...........................................................................................................................AGGGCGTGGGTTCGAATCCCAC.......................2284.5036001200065520001110000001000011021103000000000000000000000000200
..............................CGAGCGGTCTAAGGCGCCAG......................................................................................................................2074.4331003012100100000000000000131421230200001100000000000000000001100
.....................................................................................................................................TTCGAATCCCACTTCTGA.................18124.25511045000000000001000000110000100000100000000000000000000000000000
...................GTCAGGATGGCCGAGCGGTCTAA..............................................................................................................................2354.2021001000004200000100000110000112010000000100000000000000000001130
.....................CAGGATGGCCGAGCGGTCTAAG.............................................................................................................................2254.2021000000060202010100001000000000100300000000000000000000000000040
...........................GGCCGAGCGGTCTAAGGC...........................................................................................................................18124.17502947000020100000020000000000000000000000000100001000000000120000
.......................................................................TTGCCTTTCA-TA---GAAAGGT-----GTGT.................................................................2314.004000000000000000000000000000000000000000000000102000010000000000
........................................................GAGCAT--TTAACTCTTGCCTT..........................................................................................2014.004000400000000000000000000000000000000000000000000000000000000000
........................GATGGCCGAGCGGTCTAAGG............................................................................................................................2053.8019000001040100100000000010010000010000000000000000000000000004041
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCTGA.................2853.6018000200001000001109010020000000000010000000000000000000000000000
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCTGAC................2953.40170002000000000022010000000000000000000000000000000000000000000010
....................TCAGGATGGCCGAGCGGTC.................................................................................................................................1953.40170000000000000000010000100000000000000001000000000000000000000014
..............................................................................................................CTGGTCCTCTCTGAGGGCGTGGG...................................2353.2016002101003010000003000000101100000000000100000000000100000000000
.............................................................................................T-----GTGTGAGAATTCTGGTCCT..................................................2013.003010000200000000000000000000000000000000000000000000000000000000
..............................................................................TCA-TA---GAAAGGT-----GTGTGA...............................................................1813.003000001000000000000000000000000000000000000000000000000000002000
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCCACT......................2553.0015001000081130000010000000000000000000000000000000000000000000000
......................................................................................................................................TCGAATCCCACTTCTGACAC..............20123.0036537300100000002203200320000000000000100000000000000000000000020
..........................................................................................................................GAGGGCGTGGGTTCGAATCCC.........................2153.0015001100035300000000000000000000010000000000000000000000000000010
...........................................................CAT--TTAACTCTTGCCT...........................................................................................1613.003000000000000000000000000000000000000000000000001001000000010000
.......................................................................................................................................CGAATCCCACTTCTGACAAA--...........2083.0024101000000000002000000000421220000042210000000000000000000000000
..............................CGAGCGGTCTAAGGCGCCAGA.....................................................................................................................2172.8620102000011200000000000000011021020010200000000000000000000000030
..............................CGAGCGGTCTAAGGCGCCA.......................................................................................................................1972.8620002012202000000000003001002110000100002000000000000000000000000
..............................CGAGCGGTCTAAGGCGCCAGACTC..................................................................................................................2452.8014520100000000001001000000001010020000000000000000000000000000000
.............................................................................................................TCTGGTCCTCTCTGAGGGCGTGGGT..................................2552.8014401000100000000000000000000000000000010000000000200111100010000
............................................................................................................TTCTGGTCCTCTCTGAGGGCGTGGGA..................................2652.8014000000003000000000000000001100000051000000000000000000000000003
..............................CGAGCGGTCTAAGGCGCCAGAC....................................................................................................................2252.8014000001000000000000004010001031110000000000000000000010000000000
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCCA........................2352.8014000000031010000001000000000210100000000000000000000000000000040
..............................................................................................................................GCGTGGGTTCGAATCCCACTTCTGACA...............27122.673200210000000000000000000000000000000000000000000000000000000000011
.............................CCGAGCGGTCTAAGGCCT.........................................................................................................................18132.62340000000000000000001000000000000000000000000000000000000000000330
....................................................................................................................CTCTCTGAGGGCGTGGGT..................................1852.6013001000021000000001000000000110100000000100000001100010000000010
.......................GGATGGCCGAGCGGTCTAAGGC...........................................................................................................................2252.6013400000020010001000001000000001000000000000000000000000000100020
.........................ATGGCCGAGCGGTCTAAG.............................................................................................................................1852.6013010000061300000000000020000000000000000000000000000000000000000
...................................................................................................................................GGTTCGAATCCCACTTCTGACACC--...........24122.58310001000000000000000000000000000000001000000000000000000000000029
................................................................................................................................GTGGGTTCGAATCCCACTTCTGACACC--...........27122.58310020000000000000000000000000000000000000000000000000000000000029
..............................CGAGCGGTCTAAGGCGCC........................................................................................................................1872.5718521000114100000000000000000000000010000000000000000000100000010
droMoj3
CGC--TCGCAACA-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAGAGCA---AAAC-TCTTGCC-TTCGTAA---CGAGGGTTG--TGTATGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAG--AA--------CSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................GTCAGGATGGCCGAGCGGTCTAAGG............................................................................................................................255268.00134091439101295
...................GTCAGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................265120.606031041030558
...................GTCAGGATGGCCGAGCGG...................................................................................................................................185114.8057415015171814360
...................GTCAGGATGGCCGAGCGGTCTAAGGCC..........................................................................................................................275112.20561100001550
...................GTCAGGATGGCCGAGCGGTC.................................................................................................................................20571.403571911783309
...................GTCAGGATGGCCGAGCGGTCTAAGGCGC.........................................................................................................................28553.0026541003257
....................................................................................................................................GTTCGAATCCCACTTCTGA.................191239.00468376022385
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACT......................23633.83203203181126107
...................GTCAGGATGGCCGAGCGGTCTAAG.............................................................................................................................24528.2014141110134
...................GTCAGGATGGCCGAGCGGT..................................................................................................................................19518.409221224162
.....................CAGGATGGCCGAGCGGTCTAAGG............................................................................................................................23517.20861110083
......................AGGATGGCCGAGCGGTCTAAGG............................................................................................................................22514.80742022167
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCT...................26614.5087270033720
...........................................................................................................................AGGGCGTGGGTTCGAATCCCA........................21814.5011615127091
...................GTCAGGATGGCCGAGCGGTCTAA..............................................................................................................................23512.60630112059
...........................................................................................................................AGGGCGTGGGTTCGAATCCC.........................20811.50924657664
......................................................................................................................................TCGAATCCCACTTCTGACACC--...........211211.2513512400092
...................GTCAGGATGGCCGAGCGGTCTAAGGCGCC........................................................................................................................29510.20510000843
........................GATGGCCGAGCGGTCTAAGG............................................................................................................................2059.40470102044
...................GTCAGGATGGCCGAGCGGTCT................................................................................................................................2159.00454003038
...................GTCAGGATGGCCGAGCGGG..................................................................................................................................1958.60435200036
....................................................................................................................................GTTCGAATCCCACTTCTG..................18126.92837702004
...................GTCAGGATGGCCGAGCGGTCTA...............................................................................................................................2256.80341102129
...........................................................................................................................AGGGCGTGGGTTCGAATCC..........................1986.00489002037
.........AACA-----TGTCAGGATGGCCGAGCGGTC.................................................................................................................................2526.0012410061
......................AGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................2355.80293001025
....................................................................................................................................GTTCGAATCCCACTTCTGAC................20125.42656000014
...................GTCAGGATGGCCGAGCGT...................................................................................................................................1855.402710000314
....................................................................................................................................GTTCGAATCCCACTTCTGACA...............21125.17625500007
........................GATGGCCGAGCGGTCTAAG.............................................................................................................................1954.60230000023
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCA........................2264.50279300213
.....................CAGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................2454.40220000319
.......................GGATGGCCGAGCGGTCTAAGG............................................................................................................................2154.40221001020
...................GTCAGGATGGCCGAGCG....................................................................................................................................1754.40220002200
.....................CAGGATGGCCGAGCGGTCTAAGGCC..........................................................................................................................2554.20210000021
......................AGGATGGCCGAGCGGTCTAAG.............................................................................................................................2153.60182111013
.........AACA-----TGTCAGGATGGCCGAGC.....................................................................................................................................2123.507000025
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTC....................2563.33206000104
...................GTCAGGATGGCCGAGCGGTCTAAGGCGCCA.......................................................................................................................3053.20160000016
.......................GGATGGCCGAGCGGTCTAAG.............................................................................................................................2053.00152111010
.........................................................AGCA---AAAC-TCTTGCC-TTCGTAA---CGAGGG...........................................................................2813.003200010
......................................................................................................................................TCGAATCCCACTTCTGACA...............19122.92353300101
..................................................................................................................TCCTCTCTGAGGGCGTGGGT..................................2062.8317805211
.....................CAGGATGGCCGAGCGGTCTA...............................................................................................................................2052.60131000012
......................AGGATGGCCGAGCGGTCTAAGGCC..........................................................................................................................2452.60130000013
.....................CAGGATGGCCGAGCGGTCTAAG.............................................................................................................................2252.60130100012
......................................................................................................................................TCGAATCCCACTTCTGACAC..............20122.583116000150
..............................CGAGCGGTCTAAGGCGCCAGAC....................................................................................................................2252.4012200172
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTT.....................2462.3314620114
.......................................................................................................................................CGAATCCCACTTCTGACAAG--AA--------.2232.337110050
.......................................................................................................................................CGAATCCCACTTCTGACAAG--A..........2162.3314320090
............................................................................................................TTCTGGTCCTCTCTGAGGGCGTGGG...................................2562.33141110020
.....................................................................................................................TCTCTGAGGGCGTGGGTT.................................1862.1713701302
..............................CGAGCGGTCTAAGGCGCCA.......................................................................................................................1962.1713500134
...........................................................................................................................AGGGCGTGGGTTCGAATCCCAC.......................2282.1317031454
.........................................................AGCA---AAAC-TCTTGCC-TTCGTAA---CGAG.............................................................................2612.002200000
.....................................................................TCTTGCC-TTCGTAA---CGAGGGTTG--TGTA..................................................................2712.002020000
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCACT......................2462.0012020064
......................................................................CTTGCC-TTCGTAA---CGAGGGTT.........................................................................2112.002010010
...........................................................................................................................AGGGCGTGGGTTCGAATC...........................1881.88150000015
.....................................................................................................................................TTCGAATCCCACTTCTGA.................18121.83222200000
..............................CGAGCGGTCTAAGGCGCCAG......................................................................................................................2061.8311511031
............................................................................................................................GGGCGTGGGTTCGAATCCC.........................1981.7514600071
.............................................................................................................................GGCGTGGGTTCGAATCCC.........................18171.712911000171
..........................................................................................................................GAGGGCGTGGGTTCGAATCCC.........................2161.6710100135
..........................................................................................................................GAGGGCGTGGGTTCGAATCC..........................2061.67100000010
........................................................................................................................................GAATCCCACTTCTGACACC--...........19131.54203000161
..........................................................................................................................GAGGGCGTGGGTTCGAATC...........................1961.509000009
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCCA........................2361.509000108
.........AACA-----TGTCAGGATGGCCGAGCG....................................................................................................................................2221.503000012
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCTG..................2761.509700011
...................................................................................................................................GGTTCGAATCCCACTTCTGA.................20121.50181800000
......................AGGATGGCCGAGCGGTCTA...............................................................................................................................1951.407000007
....................TCAGGATGGCCGAGCGGTC.................................................................................................................................1951.407200113
............A-----TGTCAGGATGGCCGAGCGGTCTAAGG............................................................................................................................2731.334200002
..............................................................................................................................GCGTGGGTTCGAATCCCACTTCTGA.................25121.25151300002
....................................................................................................................................GTTCGAATCCCACTTCTGACACC--...........23121.25151400010
......................AGGATGGCCGAGCGGTCTAAGGCGC.........................................................................................................................2551.206100005
.....................CAGGATGGCCGAGCGGTC.................................................................................................................................1851.206200301
.......................GGATGGCCGAGCGGTCTAAGGC...........................................................................................................................2251.206000015
.........................ATGGCCGAGCGGTCTAAGGCGCCAGAC....................................................................................................................2751.206100041
........................GATGGCCGAGCGGTCTAAGGC...........................................................................................................................2151.206000015
............................................................................................................................GGGCGTGGGTTCGAATCCCACT......................2261.177600010
...............................................CAGACTCAAGAGCA---AAAC-TCTTGCC-TTCG.......................................................................................2911.001100000
.........................ATGGCCGAGCGGTCTAAGG............................................................................................................................1951.005000005
................................................................................GTAA---CGAGGGTTG--TGTATG................................................................1911.001000001
............................................................................................GTTG--TGTATGAGCGTTCTGGTC....................................................2211.001000001
..................................................ACTCAAGAGCA---AAAC-TCTTGCC-...........................................................................................2211.001000010
............................................................................................................TTCTGGTCCTCTCTGAGGGCGTGG....................................2461.006600000
........................................................................................GAGGGTTG--TGTATGAGCGTTCTGG......................................................2411.001100000
.........AACA-----TGTCAGGATGGCCGA.......................................................................................................................................1921.002000011
.........................................................AGCA---AAAC-TCTTGCC-TTCGTAA---CGAGGGT..........................................................................2911.001000010
..................................................................AC-TCTTGCC-TTCGTAA---CGAGGGTC.........................................................................2411.001000010
.........AACA-----TGTCAGGATGGCCGAG......................................................................................................................................2021.002100001
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCACTTC....................2661.006110040
..........ACA-----TGTCAGGATGGCCGAGCGGTC.................................................................................................................................2431.003100020
................................................AGACTCAAGAGCA---AAAC-T..................................................................................................1811.001010000
.........................................................AGCA---AAAC-TCTTGCC-TTCGTAA---CGAGG............................................................................2711.001100000
.....................................................................TCTTGCC-TTCGTAA---CGAGGGTT.........................................................................2211.001000010
...............................................................................................G--TGTATGAGCGTTCTGGTC....................................................1911.001000001
.................................................................................TAA---CGAGGGTTG--TGTATGAGCG............................................................2211.001000010
.....................CAGGATGGCCGAGCGGTCTAAGGCGC.........................................................................................................................2651.005000005
.........................................................AGCA---AAAC-TCTTGCC-TTCGTAA---CG...............................................................................2411.001100000
.............................................................................TTCGTAA---CGAGGGTTG--TGTA..................................................................2011.001000010
droGri2
CGC--TAGCAA-G-----TGTCAGGATGGCCGAGCGGTCTAAGGCGCCAGACTCAAG-GTTTA-AAAA-TCTTGCCTCTCTCAAGCAGAGGTTC-----GTACGAGCGTTCTGGTCCTCTCTGAGGGCGTGGGTTCGAATCCCACTTCTGACAAA--TA--------TSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...................GTCAGGATGGCCGAGCGGTC.................................................................................................................................2056242.00312101213419076
...................GTCAGGATGGCCGAGCGG...................................................................................................................................1853231.6016158133842774
...........................................................................................................................AGGGCGTGGGTTCGAATCC..........................196524.6731485782570
...........................................................................................................................AGGGCGTGGGTTCGAATC...........................186289.5017374261311
...................GTCAGGATGGCCGAGCGGT..................................................................................................................................195287.001435955480
....................TCAGGATGGCCGAGCGGTC.................................................................................................................................195284.2014211099322
..........................................................................................................................GAGGGCGTGGGTTCGAATCC..........................204262.501050199851
.........................................................................................................................TGAGGGCGTGGGTTCGAATCC..........................214206.7582793734
..........................................................................................................................GAGGGCGTGGGTTCGAATC...........................194152.00608140468
.........................................................................................................................TGAGGGCGTGGGTTCGAATC...........................204145.2558192489
...........................................................................................................................AGGGCGTGGGTTCGAATCCC.........................206115.5069397596
...........................................................................................................................AGGGCGTGGGTTCGAATCCCA........................21695.8357550525
............................................................................................................................GGGCGTGGGTTCGAATCC..........................18679.3347644036
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCCA........................23476.2530512293
..........................................................................................................................GAGGGCGTGGGTTCGAATCCC.........................21471.0028432252
...................GTCAGGATGGCCGAGCGGTCT................................................................................................................................21567.0033599236
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACT......................23464.5025862196
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCA........................22456.0022433191
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCC.........................22454.7521915204
.....................CAGGATGGCCGAGCGGTC.................................................................................................................................18552.2026120754
...................GTCAGGATGGCCGAGCGGTCTA...............................................................................................................................22548.2024124217
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCT...................26437.7515111239
...................GTCAGGATGGCCGAGCGGTCTAAG.............................................................................................................................24532.201615156
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTC....................25428.501147737
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCACT......................24426.001042777
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTT.....................24423.25936528
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCACTTCT...................27422.25894148
....................TCAGGATGGCCGAGCGGT..................................................................................................................................18518.2091883
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCACTTC....................26415.75633726
....................................................................................................................................GTTCGAATCCCACTTCTGA.................191115.6417215913
...........................................................................................................................AGGGCGTGGGTTCGAATCCCACTTCTG..................27415.00604119
............................................................................................................................GGGCGTGGGTTCGAATCCCACTTC....................24413.5054540
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCCACT......................25413.0052646
............................................................................................................................GGGCGTGGGTTCGAATCCCACTTCTG..................26412.7551510
.............................................................................................................................GGCGTGGGTTCGAATCCCACTTCTG..................251112.641391390
...................GTCAGGATGGCCGAGCGGG..................................................................................................................................19512.60633924
....................................................................................................................................GTTCGAATCCCACTTCTG..................181112.451371361
...................GTCAGGATGGCCGAGCGGTCTAA..............................................................................................................................23512.4062656
...................GTCAGGATGGCCGAGCGA...................................................................................................................................18512.00603327
...................GTCAGGATGGCCGAGCGGTCTAAGGC...........................................................................................................................26511.80591049
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCCACTTCT...................28411.5046244
...................GTCAGGATGGCCGAGCGGTCTAAGG............................................................................................................................25511.20561046
...................GTCAGGATGGCCGAGCGC...................................................................................................................................18510.80542628
............................................................................................................................GGGCGTGGGTTCGAATCCCACT......................22410.7543430
............................................................................................................................GGGCGTGGGTTCGAATCCCACTT.....................23410.2541410
............................................................................................................................GGGCGTGGGTTCGAATCCCACTTCT...................25410.0040400
.........................................................................................................................TGAGGGCGTGGGTTCGAAT............................19410.0040436
.......................GGATGGCCGAGCGGTCTAAG.............................................................................................................................2059.6048345
..........................................................................................................................GAGGGCGTGGGTTCGAAT............................1849.50381226
...................GTCAGGATGGCCGAGCGT...................................................................................................................................1859.20463115
...................GTCAGGATGGCCGAGCGTC..................................................................................................................................1959.0045540
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCACTT.....................2549.00362412
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCCACTTC....................2748.5034727
............................................................................................................................GGGCGTGGGTTCGAATCCC.........................1968.5051510
...................GTCAGGATGGCCGAGCGGTA.................................................................................................................................2057.2036828
........................GATGGCCGAGCGGTCTAAG.............................................................................................................................1957.2036234
.............................................................................................................................GGCGTGGGTTCGAATCCC.........................18177.121211201
.............................................................................................................................GGCGTGGGTTCGAATCCCACTTC....................23116.8275750
..................TGTCAGGATGGCCGAGCG....................................................................................................................................1856.8034340
.............................................................................................................................GGCGTGGGTTCGAATCCCACTTCT...................24116.0967661
......................AGGATGGCCGAGCGGTCTA...............................................................................................................................1956.0030129
.....................CAGGATGGCCGAGCGGTCTAAG.............................................................................................................................2256.0030129
............................................................................................................................GGGCGTGGGTTCGAATCCCA........................2065.6734331
..............................................................................................................................GCGTGGGTTCGAATCCCACTTCTG..................24115.6462620
.............................................................................................................................GGCGTGGGTTCGAATCCCACTT.....................22115.5561610
........................................................................................................................CTGAGGGCGTGGGTTCGAATCC..........................2225.501138
........................................................................................................................CTGAGGGCGTGGGTTCGAATC...........................2125.5011011
..............................................................................................................................GCGTGGGTTCGAATCCCACTTC....................22114.6451510
....................................................................................................................................GTTCGAATCCCACTTCTGACA...............21114.5550455
...................................................................................................................................GGTTCGAATCCCACTTCTG..................19114.4549490
.............................................................................................................................GGCGTGGGTTCGAATCCCACT......................21114.0945450
..............................................................................................................................GCGTGGGTTCGAATCCCACTTCTGACA...............27114.0044431
...................GTCAGGATGGCCGAGCGGC..................................................................................................................................1953.8019811
...................................................................................................................................GGTTCGAATCCCACTTCT...................18113.7341410
..................TGTCAGGATGGCCGAGCGGTC.................................................................................................................................2153.6018180
..............................................................................................................................GCGTGGGTTCGAATCCCACTTCT...................23113.2736360
..........................................................................................................................GAGGGCGTGGGTTCGAATCCCAC.......................2343.2513112
...................GTCAGGATGGCCGAGCGGTT.................................................................................................................................2053.0015312
..................TGTCAGGATGGCCGAGCGG...................................................................................................................................1953.0015150
....................................................................................................................................GTTCGAATCCCACTTCTGAC................20113.0033321
.....................CAGGATGGCCGAGCGGTCTA...............................................................................................................................2053.0015114
........................................................................................................................CTGAGGGCGTGGGTTCGAATCCCA........................2423.00606
...................................................................................................................................GGTTCGAATCCCACTTCTGA.................20113.0033330
.............................................................................................................................GGCGTGGGTTCGAATCCCACTTCTGA.................26112.9132320
.............................................................................................................................GGCGTGGGTTCGAATCCCACTTCTGACA...............28112.8231310
.......................GGATGGCCGAGCGGTCTA...............................................................................................................................1852.8014014
.......................GGATGGCCGAGCGGTCTAA..............................................................................................................................1952.8014311
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCCACTT.....................2642.751147
............................................................................................................................GGGCGTGGGTTCGAATCCCACTTCTGA.................2742.7511110
..................................................................................................................................GGGTTCGAATCCCACTTCTG..................20112.7330300
...........................................................................................................................AGGGCGTGGGTTCGAATA...........................1862.6716115
......................AGGATGGCCGAGCGGTCTAAG.............................................................................................................................2152.6013013
....................TCAGGATGGCCGAGCGGTCT................................................................................................................................2052.601367
..............................................................................................................................GCGTGGGTTCGAATCCCACTT.....................21112.4527270
..............................................................................................................................GCGTGGGTTCGAATCCCACTTCTGA.................25112.2725250
...................................................................................................................................GGTTCGAATCCCACTTCTGACA...............22112.2725250
.........................................................................................................................TGAGGGCGTGGGTTCGAATCCCAC.......................2442.25936
...................GTCAGGATGGCCGAGCGGTCA................................................................................................................................2152.201192
........................GATGGCCGAGCGGTCTAAGGC...........................................................................................................................2152.201138
........................GATGGCCGAGCGGTCTAAGG............................................................................................................................2052.201156
...................GTCAGGATGGCCGAGCGGTCG................................................................................................................................2152.2011101
...........................................................................................................................AGGGCGTGGGTTCGAATCCCAC.......................2262.171358
...................GTCAGGATGGCCGAGCGGTCTAAGGCC..........................................................................................................................2752.0010010
........................................................................................................................CTGAGGGCGTGGGTTCGAATCCC.........................2322.00404
...............................................................................CTCAAGCAGAGGTTC-----GTACG................................................................2012.00211
..............................CGAGCGGTCTAAGGCGCCAGAC....................................................................................................................2252.001037
.....................CAGGATGGCCGAGCGGTCTAAGG............................................................................................................................2352.001019
...................GTCAGGATGGCCGAGCGGTCCC...............................................................................................................................2251.80945
...................GTCAGGATGGCCGAGCGGTCC................................................................................................................................2151.80963

Generated: 05/17/2015 at 11:13 PM