ID:

der_960

 Coordinate:

scaffold_4820:6592674-6592824 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-10.5 -10.5

Flybase annnotation

exon [dere_GLEANR_12273:2]; CDS [Dere\GG12234-cds]; intron [Dere\GG12234-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GACCCGTCCAAAAAGAAGTCCAGAAAATGGCCTGTGCACCACTGCTGCTCGAGCAATTCATCTACAAGAAGCGCAATTTCGCCTACGCCTTTGTGCGCCATCGTCTGTTTGTGTTATGCAAACAATCGGTTGGACCACATATTGCCACATTTCACCAGGCCCAGTACTAATTAGAATTTGGGTTTCATTTGTGCATTCCAGTTAATTCGCGTTCAGTCGGCGGAGGGCATCAAACGCATCGAGATCTCGTC
*******************************************************...(((..(((.((.(((((.....((....)).....)))))..))...)))..)))...*************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M055
female body
 V107
male body		 V108
head
 V060
head
 V040
embryo
...............................CTGTGCACCACTGCTGCTCG........................................................................................................................................................................................................ 20 0 1 2.00 2 2 0 0 0 0
.......................................................ATTCATCTACAAGAAGCGCAAT.............................................................................................................................................................................. 22 0 1 2.00 2 0 1 0 1 0
..................................TGCACCACTGCTGCTCGAGCA.................................................................................................................................................................................................... 21 0 1 2.00 2 1 1 0 0 0
..............................................................................................GCGCCATCGTCTGTTTGTGTTA....................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0
........................................................................................................................................................................................................................................AACGCATCGAGATCTCGTT 19 1 1 1.00 1 1 0 0 0 0
......................................................................................................GTCTGTTTGTGTTATGCAAACAATCG........................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................................TCGCGTTCAGTCGGCGGAGGGCATCA................... 26 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................................CGCGTTCAGTCGGCGGAGGGCATC.................... 24 0 1 1.00 1 1 0 0 0 0
...................................GCACCACTGCTGCTCGAGCAATTCA............................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
.............................................TGCTCGAGCAATTCATCTAC.......................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0
.........................AATGGCCTGTGCACCACTGC.............................................................................................................................................................................................................. 20 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................................................................................................CGCGTTCAGTCGGCGGAGGGCATCAAA................. 27 0 1 1.00 1 1 0 0 0 0
............................................................................................................TTGTGTTATGCAAACAATCGG.......................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
...................................GCACCACTGCTGCTCGAGCA.................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
..................................................................AGAAGCGCAATTTCGCCTACCCCT................................................................................................................................................................. 24 1 1 1.00 1 0 0 1 0 0
................................TGTGCACCACTGCTGCTCGAGC..................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................................................................AGTCGGCGGAGGGCATCAAACGCA............. 24 0 1 1.00 1 1 0 0 0 0
.............................................................................................................................................................................................................TTCGCGTTCAGTCGGCGGAGGGC....................... 23 0 1 1.00 1 1 0 0 0 0
..........................................................CATCTACAAGAAGCGCAATTT............................................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................................TCGCGTTCAGTCGGCGGAGGGCATC.................... 25 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................CAATCGGTCGGACCACATAT............................................................................................................. 20 1 1 1.00 1 0 1 0 0 0
.....................................................................................CGCCTTTGTGCGCCATCGTCTG................................................................................................................................................ 22 0 1 1.00 1 1 0 0 0 0
............................................................TCTACAAGAAGCGCAATTTCGCCTAC..................................................................................................................................................................... 26 0 1 1.00 1 0 1 0 0 0
..............................................................................................................................................................................................................TCGCGTTCAGTCGGCGGAGGGCA...................... 23 0 1 1.00 1 1 0 0 0 0
............AAGAAGTCCAGAAAATGGCC........................................................................................................................................................................................................................... 20 0 1 1.00 1 0 0 1 0 0
..........................ATGGCCTGTGCACCACTGCTGCTCG........................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0
...................................................................................TACGCCTTTGTGCGCCATCGTCTGTT.............................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
.............AGAAGTCCAGAAAATGGCCTGTGCA..................................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
...................................................................................................ATCGTCTGTTTGTGTTATGCAAACA............................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0
......................................................AATTCATCTACAAGAAGCGC................................................................................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0
.....................................................................................................................................................................................................................CAGCCGGCGGAGGGCATCAAACGC.............. 24 1 1 1.00 1 0 1 0 0 0
.................................................................AAGAAGCGCAATTTCGCC........................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................................................GTCGGCGGAGGGCATCAAACGCATCGA......... 27 0 1 1.00 1 1 0 0 0 0
...........................................................ATCTACAAGAAGCGCAATTT............................................................................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0
.................................................CGAGCAATTCATCTACAAGAA..................................................................................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0
..........................................................................................................................................................................................................................GGCGGAGGGCATCAAACGCATCGAGATC..... 28 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................................................GTCGGCGGAGGGCATCAA.................. 18 0 1 1.00 1 1 0 0 0 0
..................................................................................................CATCGTCTGTTTGTGTTATGC.................................................................................................................................... 21 0 1 1.00 1 0 1 0 0 0
...........................................................................................................................AATCGGTCGGACCACATATGC........................................................................................................... 21 3 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................CGTTCAGTCGGCGGAGGGCA...................... 20 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................GTTCAGTCGGCGGAGGGCATCAAA................. 24 0 1 1.00 1 1 0 0 0 0
.......................................CACTGCTGCTCGAGCAATTC................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0
.....................................................................................................................................................................................................................CAGTCGGCGGAGGGCATCAAACGCA............. 25 0 1 1.00 1 1 0 0 0 0
..............................................................TACAAGAAGCGCAATTTCGCCTACGCCT................................................................................................................................................................. 28 0 1 1.00 1 0 1 0 0 0
..........................................TGCTGCTCGAGCAATTCATCTAC.......................................................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................................................GTCGGCGGAGGGCATCAAAC................ 20 0 1 1.00 1 0 1 0 0 0
................................................................CAAGAAGCGCAATTTCGCCTACGCC.................................................................................................................................................................. 25 0 1 1.00 1 0 0 1 0 0
......................................................................................................................................................................................................................AGTCGGCGGAGGGCATCAA.................. 19 0 1 1.00 1 1 0 0 0 0
...........................................................................................................................AATCGGTCGGACCACATATG............................................................................................................ 20 2 1 1.00 1 0 1 0 0 0
.................................................................................................................................................................................................................CGTTCAGTCGGCGGAGGGCATCA................... 23 0 1 1.00 1 1 0 0 0 0
...................................................................................................ATCGTCTGTTTGTGTTATGCA................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................................................GGGCATCAAACGCATCGAGATCTCG.. 25 0 1 1.00 1 0 1 0 0 0
............................................................TCTACAAGAAGCGCAATTT............................................................................................................................................................................ 19 0 1 1.00 1 0 1 0 0 0
..................................................................................................................................................................................................................GTTCAGTCGGCGGAGGGCATCA................... 22 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................................................................................................TTCAGTCGGCGGAGGGCATCAAACG............... 25 0 1 1.00 1 0 1 0 0 0
............................................................TCTACAAGAAGCGCAATTTCGCC........................................................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0
...................................................................................................ATCGTCTGTTTGTGTTATGC.................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0
..................................................................................................................................................................................................................................GCATCAAACGCGTCGTCATCT.... 21 3 1 1.00 1 0 1 0 0 0
................AGTCCAGAAAATGGCCTGTGC...................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
.................................GTGCACCACTGCTGCTCGAGCA.................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0
......................................................................................................................................................................................................................AGTCGGCGGAGGGCATCAC.................. 19 1 2 0.50 1 0 1 0 0 0
..............................................................................................................................TGCTTGGACCACATATTTCC......................................................................................................... 20 3 14 0.07 1 0 0 0 0 1

Anti-sense strand reads

CTGGGCAGGTTTTTCTTCAGGTCTTTTACCGGACACGTGGTGACGACGAGCTCGTTAAGTAGATGTTCTTCGCGTTAAAGCGGATGCGGAAACACGCGGTAGCAGACAAACACAATACGTTTGTTAGCCAACCTGGTGTATAACGGTGTAAAGTGGTCCGGGTCATGATTAATCTTAAACCCAAAGTAAACACGTAAGGTCAATTAAGCGCAAGTCAGCCGCCTCCCGTAGTTTGCGTAGCTCTAGAGCAG
***************************************************************************************************************************************...(((..(((.((.(((((.....((....)).....)))))..))...)))..)))...******************************************************* 		Read size # Mismatch Hit Count Total Norm Total V107
male body		 V108
head
 V040
embryo
........................................................................CGTTAAAGCGGATGCGGA................................................................................................................................................................. 18 0 1 1.00 1 0 1 0
....................................................................TTCGCGATAAAGCAGATGC.................................................................................................................................................................... 19 2 1 1.00 1 1 0 0
....................................................................TTTGCGTTACAGTGGATGCG................................................................................................................................................................... 20 3 5 0.20 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4820:6592624-6592874 + der_960 GACCCGTCC----AA----------------------AAAGAAG------TCCAG-AAAATGGCCTGTGCACCACTGCTGCTCGAGCAATTCATCTACAAGAAGCGCAATTTCGCCTACGCCTTTGTGCGCCATCGTCTGTTTGTGTTATGCAAACAATCGGTTGG-ACC------ACATA----TTGCC---ACA------------------------T-TTCACCAGGCC--------CAGTACTAATT-------------AGAA---TTTGGGTTTCA----------------------TT-TGTGCATTCCAGTTAATTCGCGTTCAGTCGGCGGAGGGCATCAAACGCATCGAGATCTCGTC
droYak3 3R:25024951-25025221 + dya_1140 GACCCGTCC----AAACACAAAAAAAAACAAAAAAAAAAA---G------TCCAT-AAAATGGCCTGTGCACCACTGCTGCTCGAGCAATTCATCTACAAGAAGCGCAATTTCGCCTACGCCTTTGTGCGCCATCGTCTGTTTGTGTTATGCAAACAATCGGTTGG-ACC------AGAAA----TTGCC---AGC------------------------A-TTCACCAGGCC--------CAATACTAATT-------------GCAA---ACTGATATCCA----------------------TTCTGTGCATTCCAGTTGATACGCGTTCAGTCGGCGGAGGGCATCAAACGCATCGAGATCTCGCC
droSec2 scaffold_13:236026-236272 - GACCCGTCC----AG----------------------AAA---G------TCCAG-AAAATGGCCTGTGCACCACTGCTGCTCGAGCAATTCATCTACAAGAAGCGCAATTTCGCCTACGCCTTTGTGCGCCATCGTCTGTTTGTGTTATGCAAACAATCGGTTGG-ACC------AGAAA----TTGTC---AAA--------------------------TTTACCTGTGC--------TAGTACTAATT-------------AGAA---TCTGGTATTCA----------------------TT-TGTGTATTCCAGCTAATTCGCGTTCAGTCGGCGGAGGGCATCAAGCGCATCGAGATCTCGCC
droSim2 3r:20960592-20960838 - dsi_5797 GACCCGTCC----AG----------------------AAA---G------TCCAG-AAAATGGCCTGTGCACCACTGCTGCTCGAGCAATTCATCTACAAGAAACGCAATTTCGCCTACGCCTTTGTGCGCCATCGTCTGTTTGTGTTATGCAAACAATCGGTTGG-ACC------AGAAA----TTGCC---AAA--------------------------TTTACCTGTCC--------TAGTACTAATT-------------AGAA---TCTGGTATTCA----------------------TT-TGTGTATTCCAGCTAATTCGCGTTCAGTCGGCGGAGGGCATCAAGCGCATCGAGATCTCGCC
dm3 chr3R:21449078-21449324 - GACCCGTCC----AG----------------------AAA---G------TCCAG-AAAATGGCCTGTGCACCACTGCTGCTCGAGCAATTCATCTACAAGAAGCGCAATTTCGCCTACGCCTTTGTGCGCCATCGTCTGTTTGTGTTATGTAAACAATCGGTTGG-ATC------AGAAA----TTGCC---AAA--------------------------TTCACCTGTCC--------TAGTACTAATT-------------AGAA---TCTGTTATTCA----------------------TT-TGTTAATTCCAGCTAATTCGCGTTCAGTCGGCGGAGGGCATCAAACGCATCGAGATCTCGCC
droEug1 scf7180000409682:1181819-1182066 + GACCTGTCC----AG----------------------AAA---G------TCCAC-AAAATGGCCTGTGCACCACTGATGCTCGAGCAATTTATCTACAAGAAGCGCAATTTCGCTTACGCCTTTGTGCGCCATCGTCTGTTTGTGTTATGCAAACAATCGGTTGG-ACC------AGAAC----TG-AAATT---------------------------A-TTCACCAGCCG--------AAATACTAATT-------------AATATATTTTATTTA--A----------------------TT-ATTTAATTTCAGCTAATTCGCGTTCAGTCAGCGGAGGGCATCAAACGCATCGAGATCTCGCC
droBia1 scf7180000302136:2296305-2296558 - GACCCGTCC----AG----------------------AAA---G------TCCAG-AAAATGGCCTGTGCACCACTGCTGCTCGAGCAGTTCATCTACAAGAAGCGCAATTTCGCCTACGCCTTTGTGCGCCATCGTCTCTTTGTGTTATGCAAACAATCGGTTGG-ACC------AAAAA----CT-CAATT---------------------------A-TTCAGCTTCCG--------AAATACTAATTAAGGTTTT------------TCTATTATTTA---T-------------TTTTA----TTATATTTCAGCTAATTCGCGTTCAGTCGGCGGAGGGCATCAAACGCATCGAGATCTCGCC
droTak1 scf7180000415257:334119-334376 - GACCCGTCC----AG----------------------AAA---G------TCCAGTAAAATGGCCTGTGCACCACTGCTGCTCGAGCAATTCATCTACAAGAAGCGCAATTTCGCCTACGCCTTTGTGCGCCATCGTCTGTTTGTGTTATGCAAACAATCGGTGCG-ACC------AGAAA----TG-CACTTATA--------------------------TTCACCTGCCG--------AAATA--AATTAATATTTCTT---AATA---TTTAATATTTA----------------------TT-CTTGCATTTCAGCTAATTCGCGTTCAGTCGGCGGAGGGCATCAAACGCATCGAGATCTCGCC
droEle1 scf7180000491280:3159789-3160034 - GACCTATCC----AAG---------------------AGA---A------TCCAG-AAAATGGCCTGTGCACCTTTGCTGCTCGAGCAATTCATCTACAAGAAGCGCAATTTCGCATTCGCCTTTGTGCGCCATCGTCTGTTTGTGTTATGCAAACAATCGGTTGG-ACC------AGAAA----TT-CAATT---------------------------A-ATCAGTA-TCC--------AAATGCTAACT-------------AATA----TTAATTTGTA----------------------TT-ATTTAATTGCAGCTAATTCGCGTTCAGTCCGCGGAGGGCATCAAACGCATCGAGATCTCGCC
droRho1 scf7180000779501:475045-475285 + GACCTATCC----GG----------------------AAA---A------TCCAC-AAAATGGCCTGTGCACCTTTGCTGCTCGAGCAGTTCATCTACAGGAAGCGCAATTTCGCCTACGCCTTTGTGCGCCATCGTCTGTTTGTGTTATGCAAACAATCGGTTGG-ACC------AGAAA----TT-CAATT---------------------------A-TTCAGCAGCCT--------AGTTAATAAAT-------------AA-------TGTTACTTA----------------------T---TATTATTACAGCTAATTCGCGTTCAGTCTGCGGAGGGCATCAAACGCATCGAGATCTCGCC
droFic1 scf7180000454055:1365105-1365349 - GACCTGCCC----GG----------------------AAA---A------TCAAG-AAAATGGCCTGTGCACCACTGCTGCTCGAGCAATTCATCTACAAGAAGCGCAATTTCGCTTACGCCTTTGTGCGCCATCGTCTGTTTGTGTTATGCAAACAATCGGTTGG-ACC------AACAA----TT-CAATT---------------------------A-TCCAC-TGACC--------AATAACTAATT-------------TAC----ACTATTTCTCG----------------------AT-TATTAATTCCAGCTAATTCGCGTTCAGTCGGCGGAGGGCATCAAACGCATTGAGATCTCGCC
droKik1 scf7180000302639:1587194-1587434 + --CCCATCC----AG------------------------------------------ACATGGCCTGTGCCCCGCTTCTGCTCGAGCAGTTCATCTACAAGAAGCGCAATTTCGCCTACGCCTTTGTGCGCCATCGTTTGTTCGTGTTATGCAAACAGTCGGTTGT-AAC------GGAAC----T--CAATT---------------------------AATGCACCAGCCTTAGTTACCAATTACTAATT-------------ATA--------TAATTCC---T-------------TCCGC----TTTCCTTACAGCTAATTCGCGTTCAGTCTGCTGAGGGCATCAAACGCATTGAGATCTCGCC
droAna3 scaffold_13340:3705170-3705412 - AACCCCCCA----AG----------------------AC----ATCCACCCAATA-GCCATGGCAAGTGCACCTTTGCTGCTCGAACACTTTATCTACAAGAAGCGCAATTTCGTCTACGCCTTTGTGCGCCATCGTTTATTTGTGTTATGCAAACAATCGGTGGG-GCT------ACCAA----TTACA---ATA--------------------------TC-TCTAATCA--------CAAAACTAAT----A--------------------TTGTTAA----------------------TC-GACATTTTACAGCTTATACGCGTTCAGTCTGCGGAGGGCATCAAGCGCATCGAGATCTCGCC
droBip1 scf7180000396712:648266-648514 + AACCCCTCCGCCCAA----------------------AAG-A-ATACACCCAATA-GTCATGGCAAGTGCACCTTTGCTGCTCGAACACTTCATCTACAAAAAGCGCAATTTCGTCTACGCCTTTGTGCGCCATCGTTTATTTGTGTTATGCAAACAATCGGTTGG-ACT------ACCAG----TTGGA---AGA---------TTTTT----------A-TTCAC---------------AAAACTAAT----A--------------------TTTTTAA----------------------TC-CGCATTTTACAGCTAATACGCGTTCAGTCTGCGGAGGGCATCAAGCGCATCGAGATCTCGCC
dp5 2:21197636-21197881 - dps_684 --CCAGCAC----AG----------------------AAC-----ACAGCTCTAC-GACATGGCCAGTGCTCCTCTGATGCTTGAGAACCTTCTATACAAAAAACGCAATTTGGTTTATGCCTTTGCCCGCCATCGTCTGTTTCTGTTATGCAAACAATCGGTTTG-GTTCCCCCTAAAAA----TC-AAA-----------------------------------------------------------TTAAAATTATTTGATAATGAACTCTATTTTTCC----------------------T---TTTTATTACAGCTAGTACGAGTGCAGTCTGCGGAGGGCATCAAACGCATTGAGATCTCACC
droPer2 scaffold_3:3973091-3973331 - A-------C----AG----------------------AAC-----ACAGCTCTAC-GACATGGCCAGTGCTCCTCTGATGCTTGAGAACCTTCTATACAAAAAACGCAATTTGGTTTATGCCTTTGCCCGCCATCGTCTGTTTCTGTTATGCAAACAATCGGTTTG-GTTCCCCCTAAAAA----TC-AAA-----------------------------------------------------------TTAAAATTATTTGATAATGAACTCTATTTTTCC----------------------T---TTTTATTGCAGCTAGTACGAGTGCAGTCTGCGGAGGGCATCAAACGCATTGAGATCTCACC
droWil2 scf2_1100000004943:14600667-14600931 + AAGCAGCAC----AA----------------------ACAACAT------CCAAG-ATTATGGCCAGCGCTCCATTGCTGCTAGAGAACATCATTTACAAGAAGCGCAATTATGTATTTGCCTTTGTGCGCCATCGTCTCTTTGTGTTATGCAAACAATCGGTAGA-AAT------AAATACACAT-------ATACATATTTGTTTATATTTAATTGTA----------AAT--------AACACTTAATA-------------AATG----------TACATTTT-------------ATTAT----TTATTTCTCAGCTTGTACGCGTTCAATCTGCGGAGGGCATAAAACGTATTGAGATCTCGCC
droVir3 scaffold_12855:6855691-6855949 - dvi_4226 CATTTGGCC----AAA---------------------ACAAC-ACCAAGAAGAAC-AACATGGCCAGTGCACCGCTGCTGCTCGAGCAATTCATCTATAGGAAGCGCAATTTTGTTTATGCCTTTGTGCGCCATCGTCTCTTTACGTTATGTAAACAATCGGTGTG-ATC------GCGCA----TTATT---TGA---------TTTTAAT-----------------------------------TAATT-------------ATAT---TAACTCATTCATTTCAATATAT------ACTGA----TCGGTTCACAGCTAATACGCGTGCAGTCTGCGGAGGGCATCAAACGTATCGAAATCTCGCC
droMoj3 scaffold_6540:25757274-25757508 + AAG----------------------------------A---------------AC-ACCATGGCCAGCGCTCCTTTGCTGCTCGAGCAATTCATCTACAAGAAACGAAATTTCGTTTATGCCTTTGTGCGGCATCGTCTCTTTACGTTATGTAAACAATCGGTGTG-ATC------GATG-CA--TT-----TC-------------TCTATTAAATGTA----------TGC--------AGCATCTAACC-------------AGCT----------TTCA------AATGT------GCTGC----TTGAATTACAGCTAATACGCGTGCAGTCTGCGGAGGGCATCAAACGCATCGAGATCTCGCC
droGri2 scaffold_14906:2998699-2998944 - AAC--------------------------------------------------------ATGGCCTGCGCACCGCTGCTTCTGGAACAGTTTATATACAAGAAGCGCAATTTCGTGTATGCCTTTGTGCGCCATCGTCTTTTTGTGTTATGTAAACAATCGGTGTGCAAT------AGAT-CA--TTATG---CTA---------TTCTACA-AAATT--AAAA-------TG--------AAATATTAATT-------------------------TACTAATTTGCATTTTTAATAATTTTGA----TTTGATCGTAGCTAATACGTGTGCAGTCTGCAGAGGGCATCAAGCGCGTTGAGATCTCGCC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
GACCCGTCC----AA----------------------AAAGAAG------TCCAG-AAAATGGCCTGTGCACCACTGCTGCTCGAGCAATTCATCTACAAGAAGCGCAATTTCGCCTACGCCTTTGTGCGCCATCGTCTGTTTGTGTTATGCAAACAATCGGTTGG-ACC------ACATA----TTGCC---ACA------------------------T-TTCACCAGGCC--------CAGTACTAATT-------------AGAA---TTTGGGTTTCA----------------------TT-TGTGCATTCCAGTTAATTCGCGTTCAGTCGGCGGAGGGCATCAAACGCATCGAGATCTCGTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................CTGTGCACCACTGCTGCTCG..............................................................................................................................................................................................................................................................................................2012.0022000000
........................................................................................ATTCATCTACAAGAAGCGCAAT....................................................................................................................................................................................................................................................................2212.0020010100
...................................................................TGCACCACTGCTGCTCGAGCA..........................................................................................................................................................................................................................................................................................2112.0021000100
...............................................................................................................................GCGCCATCGTCTGTTTGTGTTA.............................................................................................................................................................................................................................2211.0010000100
...............................................................................................................................................................................................................................................................................................................................................................AACGCATCGAGATCTCGTT1911.0011000000
.......................................................................................................................................GTCTGTTTGTGTTATGCAAACAATCG.................................................................................................................................................................................................................2611.0011000000
.....................................................................................................................................................................................................................................................................................................................................TCGCGTTCAGTCGGCGGAGGGCATCA...................2611.0011000000
......................................................................................................................................................................................................................................................................................................................................CGCGTTCAGTCGGCGGAGGGCATC....................2411.0011000000
....................................................................GCACCACTGCTGCTCGAGCAATTCA.....................................................................................................................................................................................................................................................................................2511.0011000000
..............................................................................TGCTCGAGCAATTCATCTAC................................................................................................................................................................................................................................................................................2011.0010000010
..........................................................AATGGCCTGTGCACCACTGC....................................................................................................................................................................................................................................................................................................2011.0011000000
......................................................................................................................................................................................................................................................................................................................................CGCGTTCAGTCGGCGGAGGGCATCAAA.................2711.0011000000
.............................................................................................................................................TTGTGTTATGCAAACAATCGG................................................................................................................................................................................................................2111.0011000000
....................................................................GCACCACTGCTGCTCGAGCA..........................................................................................................................................................................................................................................................................................2011.0011000000
.................................................................TGTGCACCACTGCTGCTCGAGC...........................................................................................................................................................................................................................................................................................2211.0011000000
.............................................................................................................................................................................................................................................................................................................................................AGTCGGCGGAGGGCATCAAACGCA.............2411.0011000000
....................................................................................................................................................................................................................................................................................................................................TTCGCGTTCAGTCGGCGGAGGGC.......................2311.0011000000
...........................................................................................CATCTACAAGAAGCGCAATTT..................................................................................................................................................................................................................................................................2111.0011000000
.....................................................................................................................................................................................................................................................................................................................................TCGCGTTCAGTCGGCGGAGGGCATC....................2511.0011000000
......................................................................................................................CGCCTTTGTGCGCCATCGTCTG......................................................................................................................................................................................................................................2211.0011000000
.............................................................................................TCTACAAGAAGCGCAATTTCGCCTAC...........................................................................................................................................................................................................................................................2611.0010000100
.....................................................................................................................................................................................................................................................................................................................................TCGCGTTCAGTCGGCGGAGGGCA......................2311.0011000000
......................................AAGAAG------TCCAG-AAAATGGCC.................................................................................................................................................................................................................................................................................................................2011.0010000010
...........................................................ATGGCCTGTGCACCACTGCTGCTCG..............................................................................................................................................................................................................................................................................................2511.0011000000
....................................................................................................................TACGCCTTTGTGCGCCATCGTCTGTT....................................................................................................................................................................................................................................2611.0011000000
.......................................AGAAG------TCCAG-AAAATGGCCTGTGCA...........................................................................................................................................................................................................................................................................................................2511.0011000000
....................................................................................................................................ATCGTCTGTTTGTGTTATGCAAACA.....................................................................................................................................................................................................................2511.0011000000
.......................................................................................AATTCATCTACAAGAAGCGC.......................................................................................................................................................................................................................................................................2011.0010000010
..................................................................................................AAGAAGCGCAATTTCGCC..............................................................................................................................................................................................................................................................1811.0011000000
..............................................................................................................................................................................................................................................................................................................................................GTCGGCGGAGGGCATCAAACGCATCGA.........2711.0011000000
............................................................................................ATCTACAAGAAGCGCAATTT..................................................................................................................................................................................................................................................................2011.0010000100
..................................................................................CGAGCAATTCATCTACAAGAA...........................................................................................................................................................................................................................................................................2111.0010000010
.................................................................................................................................................................................................................................................................................................................................................GGCGGAGGGCATCAAACGCATCGAGATC.....2811.0011000000
..............................................................................................................................................................................................................................................................................................................................................GTCGGCGGAGGGCATCAA..................1811.0011000000
...................................................................................................................................CATCGTCTGTTTGTGTTATGC..........................................................................................................................................................................................................................2111.0010000100
........................................................................................................................................................................................................................................................................................................................................CGTTCAGTCGGCGGAGGGCA......................2011.0011000000
.........................................................................................................................................................................................................................................................................................................................................GTTCAGTCGGCGGAGGGCATCAAA.................2411.0011000000
........................................................................CACTGCTGCTCGAGCAATTC......................................................................................................................................................................................................................................................................................2011.0011000000
............................................................................................................................................................................................................................................................................................................................................CAGTCGGCGGAGGGCATCAAACGCA.............2511.0011000000
...............................................................................................TACAAGAAGCGCAATTTCGCCTACGCCT.......................................................................................................................................................................................................................................................2811.0010000100
...........................................................................TGCTGCTCGAGCAATTCATCTAC................................................................................................................................................................................................................................................................................2311.0011000000
..............................................................................................................................................................................................................................................................................................................................................GTCGGCGGAGGGCATCAAAC................2011.0010000100
.................................................................................................CAAGAAGCGCAATTTCGCCTACGCC........................................................................................................................................................................................................................................................2511.0010000010
.............................................................................................................................................................................................................................................................................................................................................AGTCGGCGGAGGGCATCAA..................1911.0011000000
........................................................................................................................................................................................................................................................................................................................................CGTTCAGTCGGCGGAGGGCATCA...................2311.0011000000
....................................................................................................................................ATCGTCTGTTTGTGTTATGCA.........................................................................................................................................................................................................................2111.0011000000
.......................................................................................................................................................................................................................................................................................................................................................GGGCATCAAACGCATCGAGATCTCG..2511.0010000100
.............................................................................................TCTACAAGAAGCGCAATTT..................................................................................................................................................................................................................................................................1911.0010000100
.........................................................................................................................................................................................................................................................................................................................................GTTCAGTCGGCGGAGGGCATCA...................2211.0011000000
..........................................................................................................................................................................................................................................................................................................................................TTCAGTCGGCGGAGGGCATCAAACG...............2511.0010000100
.............................................................................................TCTACAAGAAGCGCAATTTCGCC..............................................................................................................................................................................................................................................................2311.0011000000
....................................................................................................................................ATCGTCTGTTTGTGTTATGC..........................................................................................................................................................................................................................2011.0010000100
..........................................AG------TCCAG-AAAATGGCCTGTGC............................................................................................................................................................................................................................................................................................................2111.0011000000
..................................................................GTGCACCACTGCTGCTCGAGCA..........................................................................................................................................................................................................................................................................................2211.0011000000
.............................................................................................................................................................................................................................................................................................................................................AGTCGGCGGAGGGCATCAC..................1920.5010000100
droYak3
GACCCGTCC----AAACACAAAAAAAAACAAAAAAAAAAA---G------TCCAT-AAAATGGCCTGTGCACCACTGCTGCTCGAGCAATTCATCTACAAGAAGCGCAATTTCGCCTACGCCTTTGTGCGCCATCGTCTGTTTGTGTTATGCAAACAATCGGTTGG-ACC------AGAAA----TTGCC---AGC------------------------A-TTCACCAGGCC--------CAATACTAATT-------------GCAA---ACTGATATCCA----------------------TTCTGTGCATTCCAGTTGATACGCGTTCAGTCGGCGGAGGGCATCAAACGCATCGAGATCTCGCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................................................................................................................................................................................................GTTGATACGCGTTCAGTCGGCG.............................2212.00200000020000
....................................................................................................................................ATCGTCTGTTTGTGTTATGC..........................................................................................................................................................................................................................2011.00100000010000
...........................................................................................................................................................................................................................................................................................................................................TCAGTCGGCGGAGGGCATC....................1911.00100000010000
............................................................................................ATCTACAAGAAGCGCAATTTC.................................................................................................................................................................................................................................................................2111.00100000010000
....................................................................................................................................ATCGTCTGTTTGTGTTATGCA.........................................................................................................................................................................................................................2111.00100000010000
............................................................................................ATCTACAAGAAGCGCAATTTCGCCTAC...........................................................................................................................................................................................................................................................2711.00100000010000
..................................................................................CGAGCAATTCATCTACAAGAAGC.........................................................................................................................................................................................................................................................................2311.00100000010000
................................................................................................................................................................................................................................................................................................................................TTGATACGCGTTCAGTCGGCGGAGGGCA......................2811.00100000010000
..........................................................................................................................................................................................................................................................................................................................................TTCAGTCGGCGGAGGGCATCAAACGCA.............2711.00101000000000
...............................................................................GCTCGAGCAATTCATCTACAAGAAGCG........................................................................................................................................................................................................................................................................2711.00100000010000
.......................................................................................................................................................................................................................................................................................................................................GCGTTCAGTCGGCGGAGGGCA......................2111.00101000000000
.......................................................................................AATTCATCTACAAGAAGCGCAAT....................................................................................................................................................................................................................................................................2311.00100000010000
.............................................................................................TCTACAAGAAGCGCAATTTCGCC..............................................................................................................................................................................................................................................................2311.00100000010000
......................................................................................................................................CGTCTGTTTGTGTTATGCAAACA.....................................................................................................................................................................................................................2311.00101000000000
..............................................................................................................................................................................................................................................................................................................................................GTCGGCGGAGGGCATCAAACGC..............2211.00100000100000
...................................................................................................AGAAGCGCAATTTCGCCTACGCCT.......................................................................................................................................................................................................................................................2411.00100000010000
..................................................................................................................................................................................................................................................................................................................................GATACGCGTTCAGTCGGCGGAGGGCATCA...................2911.00100000010000
.....................................................................................................................................................................................................................................................................................................................................ACGCGTTCAGTCGGCGGAGGGC.......................2211.00100000010000
...........................................................................................................................TTGTGCGCCATCGTCTGTTTGT.................................................................................................................................................................................................................................2211.00110000000000
.........................................................................................................................................................................................................................................................................................................................................GTTCAGTCGGCGGAGGGCATCAAACG...............2611.00100000010000
...............................................................................................................................................................................................................................................................................................................................GTTGATACGCGTTCAGTCGGCGGAGGG........................2711.00100000010000
.....................................................................................................................................TCGTCTGTTTGTGTTATGCA.........................................................................................................................................................................................................................2011.00100000010000
..........................................................................................TCATCTACAAGAAGCGCAATTTC.................................................................................................................................................................................................................................................................2311.00100000010000
........................................................................................................................................................................................................................................................................................................................................CGTTCAGTCGGCGGAGGGC.......................1911.00100000010000
........................................................................................ATTCATCTACAAGAAGCGCAATT...................................................................................................................................................................................................................................................................2311.00100000010000
........................................................................................ATTCATCTACAAGAAGCGCAA.....................................................................................................................................................................................................................................................................2111.00100000010000
..................................................................................................................................................................................................................................................................................................................................GATACGCGTTCAGTCGGCGGAGG.........................2311.00100000010000
.......................................................................................................................................................................................................................................................................................................................................GCGTTCAGTCGGCGGAGGGCATC....................2311.00100000010000
................................................................................................ACAAGAAGCGCAATTTCGCCTACGCCT.......................................................................................................................................................................................................................................................2711.00100000010000
..........................................................................................TCATCTACAAGAAGCGCAAT....................................................................................................................................................................................................................................................................2011.00100000010000
...............................................................................................................................................................................................................................................................................................................................GTTGATACGCGTTCAGTCGGCGGAG..........................2511.00100000010000
.......................................................................................AATTCATCTACAAGAAGCGCAATT...................................................................................................................................................................................................................................................................2411.00100000010000
.............................................................................................TCTACAAGAAGCGCAATTTCGCCTA............................................................................................................................................................................................................................................................2511.00100000010000
...........................................................................................................................................................................................................................................................................................................................................TCAGTCGGCGGAGGGCATCAAACGCA.............2611.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................ATCAAACGCATCGAGATCTC...2011.00101000000000
droSec2
GACCCGTCC----AG----------------------AAA---G------TCCAG-AAAATGGCCTGTGCACCACTGCTGCTCGAGCAATTCATCTACAAGAAGCGCAATTTCGCCTACGCCTTTGTGCGCCATCGTCTGTTTGTGTTATGCAAACAATCGGTTGG-ACC------AGAAA----TTGTC---AAA--------------------------TTTACCTGTGC--------TAGTACTAATT-------------AGAA---TCTGGTATTCA----------------------TT-TGTGTATTCCAGCTAATTCGCGTTCAGTCGGCGGAGGGCATCAAGCGCATCGAGATCTCGCCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...........................................................ATGGCCTGTGCACCACTGCTGCT................................................................................................................................................................................................................................................................................................2312.0022000
....................................................................................................................................ATCGTCTGTTTGTGTTATGCAAA.......................................................................................................................................................................................................................2311.0010001
......................................................................................................................................................................................................................................................................................................................................................AGGGCATCAAGCGCATCGAGAT......2211.0011000
......................................................................................................................................................................................................................................................................................................................................CGCGTTCAGTCGGCGGAGGGCATC....................2411.0011000
....................................................................................................................................................................................................................................................................................................................................TTCGCGTTCAGTCGGCGGAGGGCATCA...................2711.0011000
.....................................................................................................................................................................................................................................................................................................................................TCGCGTTCAGTCGGCGGAGGGCA......................2311.0010001
...............................................................................................................................................................................................................................................................................................................................................TCGGCGGAGGGCATCAAGCGC..............2111.0010100
.................................................................................................................................GCCATCGTCTGTTTGTGTTATGC..........................................................................................................................................................................................................................2311.0011000
.................................................................................................................GCCTACGCCTTTGTGCGCCATCGTCTGT.....................................................................................................................................................................................................................................2811.0011000
...................................................................................................................................................................................................................................................................................................................................................CGGAGGGCATCAAGCGCATCGAGATCT....2711.0011000
..............................................................................................................................................................................................................................................................................................................................................GTCGGCGGAGGGCATCAAGCGCA.............2311.0011000
..................................................................................................................................................................................................................................................................................................................................AATTCGCGTTCAGTCGGCGGAGGGC.......................2511.0010100
.......................................................................................................................................GTCTGTTTGTGTTATGCAAACAAT...................................................................................................................................................................................................................2411.0010001
.............................................................................................................................................................................................................................................................................................................................................AGTCGGCGGAGGGCATCA...................1811.0011000
..............................................................................................................................TGCGCCATCGTCTGTTTGT.................................................................................................................................................................................................................................1911.0010100
.........................................................................................................................................................................................................................................................................................................................................GTTCAGTCGGCGGAGGGC.......................1811.0010100
...................................................................................................AGAAGCGCAATTTCGCCT.............................................................................................................................................................................................................................................................1811.0011000
...................................................................................................................................................................................................................................................................................................................................ATTCGCGTTCAGTCGGCGGAGGGCATC....................2711.0010100
...............................................................................................TACAAGAAGCGCAATTTCGCC..............................................................................................................................................................................................................................................................2111.0010100
.............................................................................................................................................................................................................................................................................................................................................AGTCGGCGGAGGGCATCAAGCGCATCG..........2711.0010100
...............................................................................................................................................................................................................................................................................................................................GCTAATTCGCGTTCAGTCGGCGGAG..........................2511.0010100
.........................................................................................TTCATCTACAAGAAGCGCAATTT..................................................................................................................................................................................................................................................................2311.0010001
...................................................................................................................................................................................................................................................................................................................................ATTCGCGTTCAGTCGGCGGAGGGC.......................2411.0010100
..........................................................................................TCATCTACAAGAAGCGCAATT...................................................................................................................................................................................................................................................................2111.0010100
................................................................................................................CGCCTACGCCTTTGTGCGCCATC...........................................................................................................................................................................................................................................2311.0011000
............................................................................................................ATTTCGCCTACGCCTTTGTGCGCC..............................................................................................................................................................................................................................................2411.0011000
.............................................................................................................................................................................................................................................................................................................................................AGTCGGCGGAGGGCATCAAGC................2111.0010100
......................................................................................................................................................................................................................................................................................................................................CGCGTTCAGTCGGCGGAGGGCA......................2211.0010100
.....................................................................................................................................................................................................................................................................................................................................TCGCGTTCAGTCGGCGGAGGGCATCA...................2611.0010100
.........................................................................ACTGCTGCTCGAGCAATTCATCTACA...............................................................................................................................................................................................................................................................................2611.0010100
........................................................................................................................................................................................................................................................................................................................................CGTTCAGTCGGCGGAGGGC.......................1911.0010001
droSim2
GACCCGTCC----AG----------------------AAA---G------TCCAG-AAAATGGCCTGTGCACCACTGCTGCTCGAGCAATTCATCTACAAGAAACGCAATTTCGCCTACGCCTTTGTGCGCCATCGTCTGTTTGTGTTATGCAAACAATCGGTTGG-ACC------AGAAA----TTGCC---AAA--------------------------TTTACCTGTCC--------TAGTACTAATT-------------AGAA---TCTGGTATTCA----------------------TT-TGTGTATTCCAGCTAATTCGCGTTCAGTCGGCGGAGGGCATCAAGCGCATCGAGATCTCGCCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................................................................TCTGGTATTCA----------------------TT-TGTGTATTCCA...................................................2412.00200200000000000000
..................................................................................................................................................................................................................................................................................................................................AATTCGCGTTCAGTCGGCG.............................1912.00211000000000000000
...............................................................................................................................................................................................................................................................................................................................GCTAATTCGCGTTCAGTCGGC..............................2111.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................GCGTTCAGTCGGCGGAGGGCATCAAG.................2611.00100000000000010000
.....................................................................................................................................................................................................................................................................................................................................TCGCGTTCAGTCGGCGGAGGGCATC....................2511.00101000000000000000
...............................................................................................................TCGCCTACGCCTTTGTGCGCC..............................................................................................................................................................................................................................................2111.00100010000000000000
..............................................................................................................................................................................................................................................................................................................................................GTCGGCGGAGGGCATCAAGCGCATC...........2511.00110000000000000000
..............................................................................................................TTCGCCTACGCCTTTGTGCGCCATCGG.........................................................................................................................................................................................................................................2711.00101000000000000000
.......................................................................................................................................................................................................................................................................................................................................GCGTTCAGTCGGCGGAGGGCATC....................2311.00101000000000000000
...............................................................................................................................................................................................................................................................................................................................GCTAATTCGCGTTCAGTCGGCGGAGG.........................2611.00101000000000000000
.................................................................................................................................................GTTATGCAAACAATCGGTTGG-AC.........................................................................................................................................................................................................2311.00100100000000000000
........................................................................................................................................................................................................................................................................................................................................CGTTCAGTCGGCGGAGGGCATCA...................2311.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................TCAAGCGCATCGAGATCTCGCC2211.00100000000000001000
........................................................................................................................................................................................................................................................................................................................................CGTTCAGTCGGCGGAGGGCATCAAG.................2511.00101000000000000000
dm3
GACCCGTCC----AG----------------------AAA---G------TCCAG-AAAATGGCCTGTGCACCACTGCTGCTCGAGCAATTCATCTACAAGAAGCGCAATTTCGCCTACGCCTTTGTGCGCCATCGTCTGTTTGTGTTATGTAAACAATCGGTTGG-ATC------AGAAA----TTGCC---AAA--------------------------TTCACCTGTCC--------TAGTACTAATT-------------AGAA---TCTGTTATTCA----------------------TT-TGTTAATTCCAGCTAATTCGCGTTCAGTCGGCGGAGGGCATCAAACGCATCGAGATCTCGCCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...............................................................................GCTCGAGCAATTCATCTACA...............................................................................................................................................................................................................................................................................2016.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................GGCCTGTGCACCACTGCTGCT................................................................................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000100000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TCGCGTTCAGTCGGCGGAGGGCA......................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.........................................................................ACTGCTGCTCGAGCAATTCATCTACA...............................................................................................................................................................................................................................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................CGTTCAGTCGGCGGAGGGCATCA...................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TCGCGTTCAGTCGGCGGAGGGCATCA...................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000010000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................TTCGCCTACGCCTTTGTGCGCCA.............................................................................................................................................................................................................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................TACGCCTTTGTGCGCCATC...........................................................................................................................................................................................................................................1914.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000010000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................CTGTTTGTGTTATGTAAACAATC..................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TTCGCGTTCAGTCGGCGGAG..........................2013.0030000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................ATCGTCTGTTTGTGTTATGT..........................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000
......................................................G-AAAATGGCCTGTGCACCACT......................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................AGAAGCGCAATTTCGCCTACGCC........................................................................................................................................................................................................................................................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................ATCGTCTGTTTGTGTTATGTA.........................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000
..................................................TCCAG-AAAATGGCCTGTGCACCACT......................................................................................................................................................................................................................................................................................................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................CTAATTCGCGTTCAGTCGGC..............................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................GCCTTTGTGCGCCATCGTC........................................................................................................................................................................................................................................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................TCATCTACAAGAAGCGCA......................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................GCGTTCAGTCGGCGGAGG.........................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................AATTCGCGTTCAGTCGGC..............................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................GCGTTCAGTCGGCGGAGGGC.......................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000100000
......................................................................................................................CGCCTTTGTGCGCCATCGTCT.......................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................GGCCTGTGCACCACTGCT...................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................AGTCGGCGGAGGGCATCAAACGC..............2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................CGCCTACGCCTTTGTGCGCCA.............................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TCGCGTTCAGTCGGCGGAGGGCATC....................2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................GCGCAATTTCGCCTACGCCTTTGT...................................................................................................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................AAATGGCCTGTGCACCACTGC....................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................CGCGTTCAGTCGGCGGAGGGCATC....................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................GCGTTCAGTCGGCGGAGGG........................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................G------TCCAG-AAAATGGCCTGT..............................................................................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................GCTAATTCGCGTTCAGTCGGCGGAATC........................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................G------TCCAG-AAAATGGCCTGTGCACC.........................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
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...................................................................................................................................................................................................................................................................................................................................ATTCGCGTTCAGTCGGCGGAGGGCATA....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................CTGTGCACCACTGCTGCTCG..............................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................AGAAGCGCAATTTCGCCTAC...........................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................CTAATTCGCGTTCAGTCGGCGGAGGGC.......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
................................................................................................................................................................................................................................................................................................................................................CGGCGGAGGGCATCAAACG...............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
GACCTGTCC----AG----------------------AAA---G------TCCAC-AAAATGGCCTGTGCACCACTGATGCTCGAGCAATTTATCTACAAGAAGCGCAATTTCGCTTACGCCTTTGTGCGCCATCGTCTGTTTGTGTTATGCAAACAATCGGTTGG-ACC------AGAAC----TG-AAATT---------------------------A-TTCACCAGCCG--------AAATACTAATT-------------AATATATTTTATTTA--A----------------------TT-ATTTAATTTCAGCTAATTCGCGTTCAGTCAGCGGAGGGCATCAAACGCATCGAGATCTCGCCSizeHit CountTotal NormTotal
No Reads
droBia1
GACCCGTCC----AG----------------------AAA---G------TCCAG-AAAATGGCCTGTGCACCACTGCTGCTCGAGCAGTTCATCTACAAGAAGCGCAATTTCGCCTACGCCTTTGTGCGCCATCGTCTCTTTGTGTTATGCAAACAATCGGTTGG-ACC------AAAAA----CT-CAATT---------------------------A-TTCAGCTTCCG--------AAATACTAATTAAGGTTTT------------TCTATTATTTA---T-------------TTTTA----TTATATTTCAGCTAATTCGCGTTCAGTCGGCGGAGGGCATCAAACGCATCGAGATCTCGCCSizeHit CountTotal NormTotal
No Reads
droTak1
GACCCGTCC----AG----------------------AAA---G------TCCAGTAAAATGGCCTGTGCACCACTGCTGCTCGAGCAATTCATCTACAAGAAGCGCAATTTCGCCTACGCCTTTGTGCGCCATCGTCTGTTTGTGTTATGCAAACAATCGGTGCG-ACC------AGAAA----TG-CACTTATA--------------------------TTCACCTGCCG--------AAATA--AATTAATATTTCTT---AATA---TTTAATATTTA----------------------TT-CTTGCATTTCAGCTAATTCGCGTTCAGTCGGCGGAGGGCATCAAACGCATCGAGATCTCGCCSizeHit CountTotal NormTotal
No Reads
droEle1
GACCTATCC----AAG---------------------AGA---A------TCCAG-AAAATGGCCTGTGCACCTTTGCTGCTCGAGCAATTCATCTACAAGAAGCGCAATTTCGCATTCGCCTTTGTGCGCCATCGTCTGTTTGTGTTATGCAAACAATCGGTTGG-ACC------AGAAA----TT-CAATT---------------------------A-ATCAGTA-TCC--------AAATGCTAACT-------------AATA----TTAATTTGTA----------------------TT-ATTTAATTGCAGCTAATTCGCGTTCAGTCCGCGGAGGGCATCAAACGCATCGAGATCTCGCCSizeHit CountTotal NormTotal
No Reads
droRho1
GACCTATCC----GG----------------------AAA---A------TCCAC-AAAATGGCCTGTGCACCTTTGCTGCTCGAGCAGTTCATCTACAGGAAGCGCAATTTCGCCTACGCCTTTGTGCGCCATCGTCTGTTTGTGTTATGCAAACAATCGGTTGG-ACC------AGAAA----TT-CAATT---------------------------A-TTCAGCAGCCT--------AGTTAATAAAT-------------AA-------TGTTACTTA----------------------T---TATTATTACAGCTAATTCGCGTTCAGTCTGCGGAGGGCATCAAACGCATCGAGATCTCGCCSizeHit CountTotal NormTotal
No Reads
droFic1
GACCTGCCC----GG----------------------AAA---A------TCAAG-AAAATGGCCTGTGCACCACTGCTGCTCGAGCAATTCATCTACAAGAAGCGCAATTTCGCTTACGCCTTTGTGCGCCATCGTCTGTTTGTGTTATGCAAACAATCGGTTGG-ACC------AACAA----TT-CAATT---------------------------A-TCCAC-TGACC--------AATAACTAATT-------------TAC----ACTATTTCTCG----------------------AT-TATTAATTCCAGCTAATTCGCGTTCAGTCGGCGGAGGGCATCAAACGCATTGAGATCTCGCCSizeHit CountTotal NormTotal
No Reads
droKik1
--CCCATCC----AG------------------------------------------ACATGGCCTGTGCCCCGCTTCTGCTCGAGCAGTTCATCTACAAGAAGCGCAATTTCGCCTACGCCTTTGTGCGCCATCGTTTGTTCGTGTTATGCAAACAGTCGGTTGT-AAC------GGAAC----T--CAATT---------------------------AATGCACCAGCCTTAGTTACCAATTACTAATT-------------ATA--------TAATTCC---T-------------TCCGC----TTTCCTTACAGCTAATTCGCGTTCAGTCTGCTGAGGGCATCAAACGCATTGAGATCTCGCCSizeHit CountTotal NormTotal
No Reads
droAna3
AACCCCCCA----AG----------------------AC----ATCCACCCAATA-GCCATGGCAAGTGCACCTTTGCTGCTCGAACACTTTATCTACAAGAAGCGCAATTTCGTCTACGCCTTTGTGCGCCATCGTTTATTTGTGTTATGCAAACAATCGGTGGG-GCT------ACCAA----TTACA---ATA--------------------------TC-TCTAATCA--------CAAAACTAAT----A--------------------TTGTTAA----------------------TC-GACATTTTACAGCTTATACGCGTTCAGTCTGCGGAGGGCATCAAGCGCATCGAGATCTCGCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................CCTTTGTGCGCCATCGTTTA......................................................................................................................................................................................................................................2013.003300000
..............................................................................................................................................................................................................................................................................................................................................GTCTGCGGAGGGCATCAAGC................2012.002200000
.......................................................................................................................................................................................................................................................................................................................................GCGTTCAGTCTGCGGAGGGC.......................2011.001000010
.................................................................AGTGCACCTTTGCTGCTCGAACACT........................................................................................................................................................................................................................................................................................2511.001100000
......................................................A-GCCATGGCAAGTGCACCTT.......................................................................................................................................................................................................................................................................................................2011.001000001
...........................................................................................................................................................................................................................................................................................................................................................ATCAAGCGCATCGAGATCT....1911.001000010
......................................................................................................................................................................................................................................................................................................................................CGCGTTCAGTCTGCGGAGGGCATC....................2411.001100000
.....................................................................................................................................................................................................................................................................................................................................ACGCGTTCAGTCTGCGGAGG.........................2011.001000010
....................................................................................................................................................................................................................................................................................................................................................GGAGGGCATCAAGCGCATCG..........2011.001100000
.....................................................................................................................................................................................................................................................................................................................................ACGCGTTCAGTCTGCGGAGGGCA......................2311.001100000
...................................................................................................................................................................................................................................................................................................................................................CGGAGGGCATCAAGCGCATCGAGATC.....2611.001100000
..................................................................GTGCACCTTTGCTGCTCGAACAC.........................................................................................................................................................................................................................................................................................2311.001100000
........A----AG----------------------AC----ATCCACCCAATA-GCCATGG...................................................................................................................................................................................................................................................................................................................2411.001100000
...........................................ATCCACCCAATA-GCCATGGCAAG...............................................................................................................................................................................................................................................................................................................2311.001100000
...................................................................TGCACCTTTGCTGCTCGAACAC.........................................................................................................................................................................................................................................................................................2211.001000010
..................................................................................................................................................................................................................................................................................................................................TATACGCGTTCAGTCTGCGGAGGGCATC....................2811.001000010
................................................................................................................CGTCTACGCCTTTGTGCGCCA.............................................................................................................................................................................................................................................2111.001100000
..............................................................................................................................................................................................................................................................................................................................................GTCTGCGGAGGGCATCAAGCGCATC...........2511.001100000
....................................................................................................................................................................................................................................................................................................................................................GGAGGGCATCAAGCGCATCGA.........2111.001100000
..................................................................................................................................................................................................................................................................................................................................................GCGGAGGGCATCAAGCGCATCGA.........2311.001010000
.................................................................................................................................................................................................................................................................................................................................................TGCGGAGGGCATCAAGCGCATCGAGA.......2611.001100000
.............................................................................................................................................................................................................................................................................................................................................AGTCTGCGGAGGGCATCAAGCGCA.............2411.001100000
..............G----------------------AC----ATCCACCCAATA-GCCATGGC..................................................................................................................................................................................................................................................................................................................2311.001100000
.................................................................................................................................................................................................................................................................................................................................................TGCGGAGGGCATCAAGCGCATC...........2211.001100000
...........................................................................................................................................................................................................................................................................................................................................TCAGTCTGCGGAGGGCATCAAGCGCATC...........2811.001010000
....................................................................................................................................ATCGTTTATTTGTGTTATGCAAACA.....................................................................................................................................................................................................................2511.001000001
...............................................................................................................................................................................................................................................................................................................................GCTTATACGCGTTCAGTCTGCG.............................2211.001000001
............................................................................................ATCTACAAGAAGCGCAATTTC.................................................................................................................................................................................................................................................................2111.001100000
.......................................................................................................................................................................................................................................................................................................................................................GGGCATCAAGCGCATCGAGATCTCGCC2711.001000001
....................................................................................................................................................................................................................................................................................................................................TACGCGTTCAGTCTGCGGAGGGCATC....................2611.001000001
droBip1
AACCCCTCCGCCCAA----------------------AAG-A-ATACACCCAATA-GTCATGGCAAGTGCACCTTTGCTGCTCGAACACTTCATCTACAAAAAGCGCAATTTCGTCTACGCCTTTGTGCGCCATCGTTTATTTGTGTTATGCAAACAATCGGTTGG-ACT------ACCAG----TTGGA---AGA---------TTTTT----------A-TTCAC---------------AAAACTAAT----A--------------------TTTTTAA----------------------TC-CGCATTTTACAGCTAATACGCGTTCAGTCTGCGGAGGGCATCAAGCGCATCGAGATCTCGCCSizeHit CountTotal NormTotal
No Reads
dp5
--CCAGCAC----AG----------------------AAC-----ACAGCTCTAC-GACATGGCCAGTGCTCCTCTGATGCTTGAGAACCTTCTATACAAAAAACGCAATTTGGTTTATGCCTTTGCCCGCCATCGTCTGTTTCTGTTATGCAAACAATCGGTTTG-GTTCCCCCTAAAAA----TC-AAA-----------------------------------------------------------TTAAAATTATTTGATAATGAACTCTATTTTTCC----------------------T---TTTTATTACAGCTAGTACGAGTGCAGTCTGCGGAGGGCATCAAACGCATTGAGATCTCACCSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.......................................................................................................................................................................................................................................................................................................................................GAGTGCAGTCTGCGGAGGGCATCA...................2414.0040200011000
.......................................................................................................................................................................................................................................................................................................................................GAGTGCAGTCTGCGGAGGGCATC....................2314.0040000013000
........................................................................................................................................................................................................................................................................................................................................AGTGCAGTCTGCGGAGGGCATC....................2214.0040100003000
........................................................................................................................................................................................................................................................................................................................................AGTGCAGTCTGCGGAGGGCA......................2012.0020100001000
........C----AG----------------------AAC-----ACAGCTCTAC-GAC.......................................................................................................................................................................................................................................................................................................................1912.0020100010000
........C----AG----------------------AAC-----ACAGCTCTAC-GACA......................................................................................................................................................................................................................................................................................................................2012.0020200000000
.....................................................................................................................................TCGTCTGTTTCTGTTATGCA.........................................................................................................................................................................................................................2012.0020200000000
.........................................................................................................................................................................................................................................................................................................................................GTGCAGTCTGCGGAGGGCA......................1912.0020100001000
......................................................................................................AACGCAATTTGGTTTATGCC........................................................................................................................................................................................................................................................2012.0020200000000
.......................................................................CCTCTGATGCTTGAGAACC........................................................................................................................................................................................................................................................................................1912.0020101000000
.......................................................................................................................................................................................................................................................................................................................................GAGTGCAGTCTGCGGAGGGCA......................2112.0020200000000
................................................................................................................................CGCCATCGTCTGTTTCTGTTATGCA.........................................................................................................................................................................................................................2511.0010100000000
......................................................................................................................................................................................................................................................................................................................................CGAGTGCAGTCTGCGGAGGGCA......................2211.0010000001000
..............................................................GCCAGTGCTCCTCTGATGCTT...............................................................................................................................................................................................................................................................................................2111.0010100000000
..CCAGCAC----AG----------------------AAC-----ACAGCTCTAC-GA........................................................................................................................................................................................................................................................................................................................2411.0010100000000
...............................................................................................................................CCGCCATCGTCTGTTTCTGTT..............................................................................................................................................................................................................................2111.0010100000000
........................................................................CTCTGATGCTTGAGAACCTTCT....................................................................................................................................................................................................................................................................................2211.0010100000000
.....................................................................................................AAACGCAATTTGGTTTATGCCTTT.....................................................................................................................................................................................................................................................2411.0010100000000
...........................................................ATGGCCAGTGCTCCTCTGATGCTTGAGA...........................................................................................................................................................................................................................................................................................2811.0010100000000
..................................................................................................................................................................................................................................................................................................................................................GCGGAGGGCATCAAACGCATTGAGAT......2611.0010100000000
..................................................................................................................................................................................................................................................................................................................................AGTACGAGTGCAGTCTGCGGAGGGC.......................2511.0010000001000
.....GCAC----AG----------------------AAC-----ACAGCTCTAC-GACATG....................................................................................................................................................................................................................................................................................................................2511.0010100000000
......................................................................................................................................CGTCTGTTTCTGTTATGCAAACA.....................................................................................................................................................................................................................2311.0010000000010
...................................................................................................................................................................................................................................................................................................................................GTACGAGTGCAGTCTGCGGAGGGC.......................2411.0010100000000
......................................AC-----ACAGCTCTAC-GACATGGCC.................................................................................................................................................................................................................................................................................................................2111.0010100000000
..........................................................................................................................TTTGCCCGCCATCGTCTGTTTCTGTTAT............................................................................................................................................................................................................................2811.0010100000000
.................................................................................................................................GCCATCGTCTGTTTCTGTTATG...........................................................................................................................................................................................................................2211.0010000010000
..........................................................................................................................................................................................................................................................................................................................................TGCAGTCTGCGGAGGGCATCA...................2111.0010100000000
....................................................................................................................................ATCGTCTGTTTCTGTTATGCAAACAAT...................................................................................................................................................................................................................2711.0010000001000
.................................................................AGTGCTCCTCTGATGCTTG..............................................................................................................................................................................................................................................................................................1911.0010100000000
......................................................................................................................TGCCTTTGCCCGCCATCGTCTG......................................................................................................................................................................................................................................2211.0010000001000
...............................................................................................................TGGTTTATGCCTTTGCCCGCCATCGTCT.......................................................................................................................................................................................................................................2811.0010100000000
.....................................................................................................................................................................................................................................................................................................................................ACGAGTGCAGTCTGCGGAGGGCA......................2311.0010000001000
.................................................................AGTGCTCCTCTGATGCTTGAG............................................................................................................................................................................................................................................................................................2111.0010100000000
............................................................TGGCCAGTGCTCCTCTGAT...................................................................................................................................................................................................................................................................................................1911.0010100000000
..................................................................................................................................................................................................................................................................................................................................AGTACGAGTGCAGTCTGCGGAGGGCA......................2611.0010001000000
....................................................................................................................................................................................................................................................................................................................................................GGAGGGCATCAAACGCATTGAG........2211.0010100000000
............................................................................GATGCTTGAGAACCTTCTATA.................................................................................................................................................................................................................................................................................2111.0010100000000
...............................................................................GCTTGAGAACCTTCTATACA...............................................................................................................................................................................................................................................................................2011.0010000001000
..........................................................................CTGATGCTTGAGAACCTTC.....................................................................................................................................................................................................................................................................................1911.0010100000000
.................................................................................................................................................................................................................................................................................................................................................TGCGGAGGGCATCAAACGCA.............2011.0010100000000
.........................................................................................................................................................................................................................................................................................................................................GTGCAGTCTGCGGAGGGC.......................1811.0010100000000
.........................................................................TCTGATGCTTGAGAACCTTCT....................................................................................................................................................................................................................................................................................2111.0010100000000
.........................................................................................................................................................................................................................................................................................................................................GTGCAGTCTGCGGAGGGCATCAAAC................2511.0010000010000
............................................................................................................ATTTGGTTTATGCCTTTGCCCGC...............................................................................................................................................................................................................................................2311.0010001000000
..................................................................................................................................................................................................................................................................................................................................AGTACGAGTGCAGTCTGCGGA...........................2111.0010000010000
......................................................................................................................................................................................................................................................................................................................................CGAGTGCAGTCTGCGGAGGGCATC....................2411.0010100000000
...............................................................................GCTTGAGAACCTTCTATACAAA.............................................................................................................................................................................................................................................................................2211.0010100000000
...............................................................................................................................CCGCCATCGTCTGTTTCTGTTATG...........................................................................................................................................................................................................................2411.0010000001000
............................................................................................................................................................................................................................................................................................................................................................TCAAACGCATTGAGATCTCACC2211.0010100000000
..................................................................GTGCTCCTCTGATGCTTGA.............................................................................................................................................................................................................................................................................................1911.0010100000000
..................................................................GTGCTCCTCTGATGCTTGAG............................................................................................................................................................................................................................................................................................2011.0010000001000
........................................................................................................................CCTTTGCCCGCCATCGTCTGTT....................................................................................................................................................................................................................................2211.0010000001000
.............................................................................................................................GCCCGCCATCGTCTGTTTCTGTTATGCA.........................................................................................................................................................................................................................2811.0010100000000
..............................................................GCCAGTGCTCCTCTGATGCTTGAGAACC........................................................................................................................................................................................................................................................................................2811.0010100000000
..........................................................................................................................................................................................................................................................................................................................................TGCAGTCTGCGGAGGGCATCAAACGCA.............2711.0010000001000
........................................................................................................................................................................................................................................................................................................................................AGTGCAGTCTGCGGAGGGCAT.....................2111.0010000001000
........................................................................CTCTGATGCTTGAGAACCTTCTATA.................................................................................................................................................................................................................................................................................2511.0010100000000
..........................................................................................................................................................................................................................................................................................................................................TGCAGTCTGCGGAGGGCAT.....................1911.0010100000000
..................................................................................................................................................................................................................................................................................................................................................GCGGAGGGCATCAAACGCA.............1911.0010000010000
..................................................................GTGCTCCTCTGATGCTTGAGAACC........................................................................................................................................................................................................................................................................................2411.0010001000000
.....................................................................................................................................TCGTCTGTTTCTGTTATGCAAAC......................................................................................................................................................................................................................2311.0010100000000
..............................................................................TGCTTGAGAACCTTCTATACAAAA............................................................................................................................................................................................................................................................................2411.0010100000000
........C----AG----------------------AAC-----ACAGCTCTAC-GACATGGCC.................................................................................................................................................................................................................................................................................................................2511.0010001000000
...................................................................................................................................................................................................................................................................................................................................GTACGAGTGCAGTCTGCGGAGGGCATC....................2711.0010000001000
..................................................................GTGCTCCTCTGATGCTTGAGAACCTTCT....................................................................................................................................................................................................................................................................................2811.0010100000000
.............................................................GGCCAGTGCTCCTCTGATGCTTGAGAAC.........................................................................................................................................................................................................................................................................................2811.0010100000000
................................................GCTCTAC-GACATGGCCAGTG.............................................................................................................................................................................................................................................................................................................2011.0010100000000
.........................................................................TCTGATGCTTGAGAACCTTCTATACAAA.............................................................................................................................................................................................................................................................................2811.0011000000000
....................................................................................................................TATGCCTTTGCCCGCCATCGTCTG......................................................................................................................................................................................................................................2411.0010100000000
...........................................................ATGGCCAGTGCTCCTCTGATGCTT...............................................................................................................................................................................................................................................................................................2411.0010100000000
.............................................................................................................................GCCCGCCATCGTCTGTTTCTGTTAT............................................................................................................................................................................................................................2511.0010000010000
.....................................................AC-GACATGGCCAGTGCTCCT........................................................................................................................................................................................................................................................................................................2011.0010000001000
......................................................................................................................................................................................................................................................................................................................................CGAGTGCAGTCTGCGGAGGGCATCA...................2511.0010000001000
.................................................................................................................................................................................................................................................................................................................................................TGCGGAGGGCATCAAACGCATTGAGA.......2611.0010100000000
........................................................................................................................................................................................................................................................................................................................................AGTGCAGTCTGCGGAGGGCATCA...................2311.0010100000000
.................................................................................................................................GCCATCGTCTGTTTCTGTTATGCA.........................................................................................................................................................................................................................2411.0010100000000
......................................................................................................AACGCAATTTGGTTTATGCCTTT.....................................................................................................................................................................................................................................................2311.0010000001000
............................................................................................................................TGCCCGCCATCGTCTGTTTCTGTTA.............................................................................................................................................................................................................................2511.0010100000000
.................................................................................................................................................................................................................................................................................................................................TAGTACGAGTGCAGTCTGCGG............................2111.0010100000000
...................................................................TGCTCCTCTGATGCTTGAGAAC.........................................................................................................................................................................................................................................................................................2211.0010100000000
.......................................................................CCTCTGATGCTTGAGAACCT.......................................................................................................................................................................................................................................................................................2011.0010100000000
.....................................................................................................................................TCGTCTGTTTCTGTTATGCAAACAATC..................................................................................................................................................................................................................2711.0010100000000
..........................................................................................................................TTTGCCCGCCATCGTCTGTTTC..................................................................................................................................................................................................................................2211.0010001000000
...............................................................................GCTTGAGAACCTTCTATAC................................................................................................................................................................................................................................................................................1911.0010100000000
..........................................................................................................................TTTGCCCGCCATCGTCTGTTTCT.................................................................................................................................................................................................................................2311.0010100000000
................................................................................................................................................................................................................................................................................................................................................CTGCGGAGGGCATCAAACG...............1911.0010100000000
.............................................................................................................................................................................................................................................................................................................................................AGTCTGCGGAGGGCATCAAACGC..............2311.0010100000000
.....................................................................................................................................................................................................................................................................................................................................ACGAGTGCAGTCTGCGGAGGGC.......................2211.0010100000000
......................................................C-GACATGGCCAGTGCTCCTC.......................................................................................................................................................................................................................................................................................................2011.0010100000000
............................................................................................................................................................................................................................................................................................................................................................TCAAACGCATTGAGATCTC...1911.0010100000000
.......................................................................................................ACGCAATTTGGTTTATGCC........................................................................................................................................................................................................................................................1911.0010001000000
...CAGCAC----AG----------------------AAC-----ACAGCTCTAC-G.........................................................................................................................................................................................................................................................................................................................2211.0010100000000
..........................................................................CTGATGCTTGAGAACCTTCTATA.................................................................................................................................................................................................................................................................................2311.0010100000000
............................................................TGGCCAGTGCTCCTCTGATG..................................................................................................................................................................................................................................................................................................2011.0010100000000
.......................................................................................................................GCCTTTGCCCGCCATCGTCTG......................................................................................................................................................................................................................................2111.0010000001000
................................................................................................................................................................................................................................................................................................................................................CTGCGGAGGGCATCAAACGCA.............2111.0010000001000
............................................................................................................ATTTGGTTTATGCCTTTGCCCGCCATCGT.........................................................................................................................................................................................................................................2911.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................GGGCATCAAACGCATTGA.........1811.0010100000000
.............................................................................................................................GCCCGCCATCGTCTGTTTCTGTC..............................................................................................................................................................................................................................2311.0010001000000
droPer2
A-------C----AG----------------------AAC-----ACAGCTCTAC-GACATGGCCAGTGCTCCTCTGATGCTTGAGAACCTTCTATACAAAAAACGCAATTTGGTTTATGCCTTTGCCCGCCATCGTCTGTTTCTGTTATGCAAACAATCGGTTTG-GTTCCCCCTAAAAA----TC-AAA-----------------------------------------------------------TTAAAATTATTTGATAATGAACTCTATTTTTCC----------------------T---TTTTATTGCAGCTAGTACGAGTGCAGTCTGCGGAGGGCATCAAACGCATTGAGATCTCACCSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................................................................................................................................GAGTGCAGTCTGCGGAGGGCA......................2112.002000002
.......................................................................................................................................................................................................................................................................................................................................GAGTGCAGTCTGCGGAGGGCATCAA..................2512.002020000
.............................................................GGCCAGTGCTCCTCTGAT...................................................................................................................................................................................................................................................................................................1812.002020000
.......................................................................................................................................................................................................................................................................................................................................GAGTGCAGTCTGCGGAGGGCATC....................2312.002000002
......................................................................................................................................................................................................................................................................................................................................CGAGTGCAGTCTGCGGAGGGCA......................2212.002000002
...................................................................................................................................................................................................................................................................................................................................GTACGAGTGCAGTCTGCGGA...........................2012.002000002
..........................................................................................................................................................................................................................................................................................................................................TGCAGTCTGCGGAGGGCAT.....................1911.001010000
.............................................................................................................................GCCCGCCATCGTCTGTTTCTGTTATGCA.........................................................................................................................................................................................................................2811.001010000
...................................................................................................................................................................................................................................................................................................................................GTACGAGTGCAGTCTGCGGAGGGCA......................2511.001000001
...............................................................................GCTTGAGAACCTTCTATACA...............................................................................................................................................................................................................................................................................2011.001010000
............................................................TGGCCAGTGCTCCTCTGATGCTTGAGA...........................................................................................................................................................................................................................................................................................2711.001010000
.............AG----------------------AAC-----ACAGCTCTAC-GACA......................................................................................................................................................................................................................................................................................................................1911.001010000
...........................................................................................................................................................................................................................................................................................................................................GCAGTCTGCGGAGGGCATCAA..................2111.001010000
............................................................................GATGCTTGAGAACCTTCTATACA...............................................................................................................................................................................................................................................................................2311.001010000
.....................................................................................................................................TCGTCTGTTTCTGTTATGCA.........................................................................................................................................................................................................................2011.001010000
................................................GCTCTAC-GACATGGCCAGTGCTCCT........................................................................................................................................................................................................................................................................................................2511.001010000
..............................................................................................................................................................................................................................................................................................................................................GTCTGCGGAGGGCATCAAA.................1911.001000001
.....................................................................................................................................................................................................................................................................................................................................ACGAGTGCAGTCTGCGGAGGGCA......................2311.001010000
.....................................................................CTCCTCTGATGCTTGAGAACC........................................................................................................................................................................................................................................................................................2111.001010000
........................................................................................................................................................................................................................................................................................................................................AGTGCAGTCTGCGGAGGGC.......................1911.001010000
.....................................................................................................................................................................................................................................................................................................................................ACGAGTGCAGTCTGCGGAGGGC.......................2211.001001000
........................................................................................................................................................................................................................................................................................................................................AGTGCAGTCTGCGGAGGGCA......................2011.001010000
................................................................................................................................CGCCATCGTCTGTTTCTGTTATGCA.........................................................................................................................................................................................................................2511.001010000
...................................................................................................................................................................................................................................................................................................................................GTACGAGTGCAGTCTGCGGAGG.........................2211.001000001
............................................................................GATGCTTGAGAACCTTCTATACAAAA............................................................................................................................................................................................................................................................................2611.001010000
.........................................................................................................................................................................................................................................................................................................................................GTGCAGTCTGCGGAGGGC.......................1811.001000001
....................................................................................................................................ATCGTCTGTTTCTGTTATGCAAACA.....................................................................................................................................................................................................................2511.001010000
.........................................................................................................................................................................................................................................................................................................................................GTGCAGTCTGCGGAGGGCATC....................2111.001000001
...............................................................................................................................................................................................................................................................................................................................GCTAGTACGAGTGCAGTCT................................1911.001010000
............................................................................................................................TGCCCGCCATCGTCTGTTTCT.................................................................................................................................................................................................................................2111.001000001
...................................................................................................................................................................................................................................................................................................................................GTACGAGTGCAGTCTGCGGAGGGC.......................2411.001010000
...................................................................................................................................................................................................................................................................................................................................GTACGAGTGCAGTCTGCGGAGGGCATC....................2711.001000001
.....................................................................................................................................................................................................................................................................................................................................ACGAGTGCAGTCTGCGGAGGGCATC....................2511.001000001
......................................................................................................AACGCAATTTGGTTTATGCCT.......................................................................................................................................................................................................................................................2111.001000100
............................................................TGGCCAGTGCTCCTCTGATGCTTGAG............................................................................................................................................................................................................................................................................................2611.001010000
......................................................................................................................................................................................................................................................................................................................................CGAGTGCAGTCTGCGGAGGGC.......................2111.001000001
........C----AG----------------------AAC-----ACAGCTCTAC-GAC.......................................................................................................................................................................................................................................................................................................................1911.001010000
................................................................................................................................CGCCATCGTCTGTTTCTGTTATG...........................................................................................................................................................................................................................2311.001000001
................................................................................................................................CGCCATCGTCTGTTTCTGTT..............................................................................................................................................................................................................................2011.001010000
.............................................................................................................................................................................................................................................................................................................................................................CAAACGCATTGAGATCTCA..1911.001010000
...................................................................................GAGAACCTTCTATACAAA.............................................................................................................................................................................................................................................................................1811.001010000
...............................................................................................................................................................................................................................................................................................................................................TCTGCGGAGGGCATCAAACGCATTGAG........2711.001010000
.........................................................................TCTGATGCTTGAGAACCTTCTATACAAAA............................................................................................................................................................................................................................................................................2911.001010000
........C----AG----------------------AAC-----ACAGCTCTAC-GACA......................................................................................................................................................................................................................................................................................................................2011.001010000
..............................................................................................................................CCCGCCATCGTCTGTTTCTGTT..............................................................................................................................................................................................................................2211.001010000
..........................................................................................................................................................................................................................................................................................................................................TGCAGTCTGCGGAGGGCATCAA..................2211.001000001
....................................................................................................................................ATCGTCTGTTTCTGTTATGCAAA.......................................................................................................................................................................................................................2311.001000001
.....................................................................................................................................................................................................................................................................................................................................ACGAGTGCAGTCTGCGGAGGG........................2111.001010000
.......................................................................................................ACGCAATTTGGTTTATGCCT.......................................................................................................................................................................................................................................................2011.001010000
.................................................................................................................GTTTATGCCTTTGCCCGCC..............................................................................................................................................................................................................................................1911.001010000
................................................................CAGTGCTCCTCTGATGCTTGAGAACC........................................................................................................................................................................................................................................................................................2611.001010000
droWil2
AAGCAGCAC----AA----------------------ACAACAT------CCAAG-ATTATGGCCAGCGCTCCATTGCTGCTAGAGAACATCATTTACAAGAAGCGCAATTATGTATTTGCCTTTGTGCGCCATCGTCTCTTTGTGTTATGCAAACAATCGGTAGA-AAT------AAATACACAT-------ATACATATTTGTTTATATTTAATTGTA----------AAT--------AACACTTAATA-------------AATG----------TACATTTT-------------ATTAT----TTATTTCTCAGCTTGTACGCGTTCAATCTGCGGAGGGCATAAAACGTATTGAGATCTCGCCSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................................................................................................................................................................................................................................AACGTATTGAGATCTCGCC1917.00761000
............................................................................................................................................................................................................................................................................................................................................................TAAAACGTATTGAGATCTCGCC2215.00550000
.........................................................................................................................................................................................................................................................................................................................................GTTCAATCTGCGGAGGGC.......................1814.00401030
..............................................................................................................................................................................................................................................................................................................................................................AAACGTATTGAGATCTCGCC2014.00431000
.............................................................................................................................................................................................................................................................................................................................................................AAAACGTATTGAGATCTCGCC2112.00220000
...........................................................................................................................TTGTGCGCCATCGTCTCTTTGT.................................................................................................................................................................................................................................2212.00210100
...........................................................................................................................TTGTGCGCCATCGTCTCT.....................................................................................................................................................................................................................................1812.00200200
...............................................................................................................ATGTATTTGCCTTTGTGCGCCATCG..........................................................................................................................................................................................................................................2511.00101000
......................................................................................................................TGCCTTTGTGCGCCATCGTCTCTTTGT.................................................................................................................................................................................................................................2711.00110000
.................................................................AGCGCTCCATTGCTGCTAGAGAACA........................................................................................................................................................................................................................................................................................2511.00101000
.........................................................................................................................................................................................................................................................................................................................................GTTCAATCTGCGGAGGGCATA....................2111.00101000
................................................................................................................................CGCCATCGTCTCTTTGTGTTATGCA.........................................................................................................................................................................................................................2511.00100100
........................................................................CATTGCTGCTAGAGAACATC......................................................................................................................................................................................................................................................................................2011.00110000
............................................................................................................................TGTGCGCCATCGTCTCTTTGT.................................................................................................................................................................................................................................2111.00110000
.....................................................AG-ATTATGGCCAGCGCTCCA........................................................................................................................................................................................................................................................................................................2011.00100100
..........................................................................................................................TTTGTGCGCCATCGTCTCTTTGTGT...............................................................................................................................................................................................................................2511.00110000
................................................................................................................................................................................................................................................................................................................................................................ACGTATTGAGATCTCGCC1811.00110000
..................................................................................AGAGAACATCATTTACAAGAAGCGCAAT....................................................................................................................................................................................................................................................................2811.00101000
............................................................................................................................................................................................................................................................................................................................................CAATCTGCGGAGGGCATAA...................1911.00100100
droVir3
CATTTGGCC----AAA---------------------ACAAC-ACCAAGAAGAAC-AACATGGCCAGTGCACCGCTGCTGCTCGAGCAATTCATCTATAGGAAGCGCAATTTTGTTTATGCCTTTGTGCGCCATCGTCTCTTTACGTTATGTAAACAATCGGTGTG-ATC------GCGCA----TTATT---TGA---------TTTTAAT-----------------------------------TAATT-------------ATAT---TAACTCATTCATTTCAATATAT------ACTGA----TCGGTTCACAGCTAATACGCGTGCAGTCTGCGGAGGGCATCAAACGTATCGAAATCTCGCCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.....................................................................................................AAGCGCAATTTTGTTTATGCC........................................................................................................................................................................................................................................................2112.002000000000000000000000010000000000000000000000000000000000000100
.............................................................................................................................................................................................................................................................................................................................................AGTCTGCGGAGGGCATCA...................1812.002001000000000000001000000000000000000000000000000000000000000000
.................................................................................................TAGGAAGCGCAATTTTGTTTATGCC........................................................................................................................................................................................................................................................2512.002002000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TGCCTTTGTGCGCCATCGTCTC......................................................................................................................................................................................................................................2212.002002000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................ATACGCGTGCAGTCTGCGG............................1911.001000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................GCCTTTGTGCGCCATCGTCTCT.....................................................................................................................................................................................................................................2211.001100000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................ATGCCTTTGTGCGCCATCGTCTC......................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................TCATCTATAGGAAGCGCAATTTTGTTTA............................................................................................................................................................................................................................................................2811.001000000000000000000100000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................GTGCAGTCTGCGGAGGGCATC....................2111.001000000000000000000000000000000000000000000000000000000000000010
........................................................................................ATTCATCTATAGGAAGCGCAATTTTGTT..............................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................TGTTTATGCCTTTGTGCGCCATC...........................................................................................................................................................................................................................................2311.001000000000000000000100000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................AATACGCGTGCAGTCTGCGGAGGGC.......................2511.001000000000000000001000000000000000000000000000000000000000000000
........................................................................................................................CCTTTGTGCGCCATCGTCTCT.....................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................TGCAGTCTGCGGAGGGCATCA...................2111.001000000000000000000000000000010000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................CGTGCAGTCTGCGGAGGGCA......................2011.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................TCAAACGTATCGAAATCTCGCC2211.001001000000000000000000000000000000000000000000000000000000000000
..............AA---------------------ACAAC-ACCAAGAAGAAC-AACAT.....................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................GTTTATGCCTTTGTGCGCCATCGTCT.......................................................................................................................................................................................................................................2611.001000000000000000000100000000000000000000000000000000000000000000
....................................................................GCACCGCTGCTGCTCGAGCA..........................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
..............................................AAGAAGAAC-AACATGGCCAG...............................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................................ACGCGTGCAGTCTGCGGAGGGCATCC...................2611.001000000000000000000000100000000000000000000000000000000000000000
........................................................................................................................................TCTCTTTACGTTATGTAAACAATCG.................................................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................TTCATCTATAGGAAGCGCAAT....................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................TGCCTTTGTGCGCCATCGTC........................................................................................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
.............................................................................................TCTATAGGAAGCGCAATTTTGTTTATGC.........................................................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................ACGCGTGCAGTCTGCGGAGGGCATCA...................2611.001000000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................ATGCCTTTGTGCGCCATCGTCTCTT....................................................................................................................................................................................................................................2511.001000000000000000000100000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................GTCTGCGGAGGGCATCAAACGTATCGA.........2711.001000000000000000000000010000000000000000000000000000000000000000
.............................................................................................................................................TTACGTTATGTAAACAATCG.................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................ATAT------ACTGA----TCGGTTCACAGCT................................................2211.001000000000000000001000000000000000000000000000000000000000000000
..............AA---------------------ACAAC-ACCAAGAAGAAC-AACATGGCCAGTGCACC.........................................................................................................................................................................................................................................................................................................3611.001000000000000000000000000000000000000000000000000000000000100000
..............................................................................................................TTTGTTTATGCCTTTGTGCGCC..............................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................ATCGTCTCTTTACGTTATGTAAACAAT...................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
................................................GAAGAAC-AACATGGCCAGTGCAC..........................................................................................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................TTGTTTATGCCTTTGTGCGCCATCGTCTG......................................................................................................................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................GGGCATCAAACGTATCGAA........1911.001000000000000000001000000000000000000000000000000000000000000000
............................................................................................ATCTATAGGAAGCGCAATT...................................................................................................................................................................................................................................................................1911.001000000000000000000100000000000000000000000000000000000000000000
..........................................................................................................................TTTGTGCGCCATCGTCTCTTTACGTT..............................................................................................................................................................................................................................2611.001000000000000000000010000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TACGCGTGCAGTCTGCGGAGGGC.......................2311.001000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TACGCGTGCAGTCTGCGGAGGGCATCA...................2711.001000000000000000000010000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................CGCGTGCAGTCTGCGGAGGGCATCA...................2511.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................GTCTCTTTACGTTATGTAAACAA....................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................CGTCTCTTTACGTTATGTAAA.......................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................ACGCGTGCAGTCTGCGGAGGGCATCAA..................2711.001000000000000000100000000000000000000000000000000000000000000000
.........................................................................................TTCATCTATAGGAAGCGCA......................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
...............A---------------------ACAAC-ACCAAGAAGAAC-AACATGGCC.................................................................................................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000100000
..............................................AAGAAGAAC-AACATGGCCAGT..............................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................TTGTTTATGCCTTTGTGCGCCATCGTC........................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.......................................AAC-ACCAAGAAGAAC-AACA......................................................................................................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................ACGCGTGCAGTCTGCGGAGGGCAT.....................2411.001000000000000000000010000000000000000000000000000000000000000000
...................................................................................................................TTATGCCTTTGTGCGCCATCGTCT.......................................................................................................................................................................................................................................2411.001000000000000000000000100000000000000000000000000000000000000000
.............................................................................................................................................TTACGTTATGTAAACAATC..................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..................................................................GTGCACCGCTGCTGCTCGAGCAAT........................................................................................................................................................................................................................................................................................2411.001000000000000000010000000000000000000000000000000000000000000000
.....................................................................................................................ATGCCTTTGTGCGCCATCGT.........................................................................................................................................................................................................................................2011.001000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TAATACGCGTGCAGTCTGC..............................1911.001000000000000000000100000000000000000000000000000000000000000000
..........................................................................................................................TTTGTGCGCCATCGTCTCA.....................................................................................................................................................................................................................................1911.001000000000000000000000100000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................GAGGGCATCAAACGTATCGAAATCTCGC.2811.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................TGTTTATGCCTTTGTGCGCCATCGTCTC......................................................................................................................................................................................................................................2811.001000000000000000000100000000000000000000000000000000000000000000
...................................................GAAC-AACATGGCCAGTGCAC..........................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................CCGCTGCTGCTCGAGCAATTCATC...................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................AGCAATTCATCTATAGGAAGCG........................................................................................................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
............................................................................................................ATTTTGTTTATGCCTTTGTGCGCCA.............................................................................................................................................................................................................................................2511.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................TCTTTACGTTATGTAAACAATCGC................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
..............................................AAGAAGAAC-AACATGGCCAGTGCACCG........................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TACGCGTGCAGTCTGCGGA...........................1911.001000000000000000000100000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................AATACGCGTGCAGTCTGCGGAGGGCA......................2611.001000000000000000001000000000000000000000000000000000000000000000
................................................................................................................TGTTTATGCCTTTGTGCGCC..............................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................AACGTATCGAAATCTCGCC1911.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................AATTCATCTATAGGAAGCGCAAT....................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................GTCTGCGGAGGGCATCAAAC................2011.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................TGTGCGCCATCGTCTCTTTAC.................................................................................................................................................................................................................................2111.001000000000000001000000000000000000000000000000000000000000000000
........C----AAA---------------------ACAAC-ACCAAGAAGAAC-..........................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................GCGGAGGGCATCAAACGTATCG..........2211.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................CTTTGTGCGCCATCGTCTCT.....................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................AATTCATCTATAGGAAGCGCAATTTT.................................................................................................................................................................................................................................................................2611.001000000000000000000000010000000000000000000000000000000000000000
................................................................................................................TGTTTATGCCTTTGTGCGCCATCGTCT.......................................................................................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................................TCTGCGGAGGGCATCAAA.................1820.501001000000000000000000000000000000000000000000000000000000000000
droMoj3
AAG----------------------------------A---------------AC-ACCATGGCCAGCGCTCCTTTGCTGCTCGAGCAATTCATCTACAAGAAACGAAATTTCGTTTATGCCTTTGTGCGGCATCGTCTCTTTACGTTATGTAAACAATCGGTGTG-ATC------GATG-CA--TT-----TC-------------TCTATTAAATGTA----------TGC--------AGCATCTAACC-------------AGCT----------TTCA------AATGT------GCTGC----TTGAATTACAGCTAATACGCGTGCAGTCTGCGGAGGGCATCAAACGCATCGAGATCTCGCCSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................................................................................................................................................................................................................................................GTCTGCGGAGGGCATCAAACGCATCG..........2612.002000002
..............................................................................................................TTCGTTTATGCCTTTGTGCGGCA.............................................................................................................................................................................................................................................2311.001100000
.....................................................................................................................................TCGTCTCTTTACGTTATGTAAACA.....................................................................................................................................................................................................................2411.001100000
.........................................................................................................................................................................................................................................................................................................................................GTGCAGTCTGCGGAGGGCATCAA..................2311.001000001
.......................................................................................................................................................................................................................................................................................................................................GCGTGCAGTCTGCGGAGGGC.......................2011.001000001
.........................................................CCATGGCCAGCGCTCCTTTGCTGCTC...............................................................................................................................................................................................................................................................................................2611.001100000
droGri2
AAC--------------------------------------------------------ATGGCCTGCGCACCGCTGCTTCTGGAACAGTTTATATACAAGAAGCGCAATTTCGTGTATGCCTTTGTGCGCCATCGTCTTTTTGTGTTATGTAAACAATCGGTGTGCAAT------AGAT-CA--TTATG---CTA---------TTCTACA-AAATT--AAAA-------TG--------AAATATTAATT-------------------------TACTAATTTGCATTTTTAATAATTTTGA----TTTGATCGTAGCTAATACGTGTGCAGTCTGCAGAGGGCATCAAGCGCGTTGAGATCTCGCCSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 11:09 PM