ID:

der_921

Coordinate:

scaffold_4820:2040064-2040248 +

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-25.0 -25.0 -24.5 -24.4

Flybase annnotation

CDS [Dere\GG11962-cds]; exon [dere_GLEANR_12016:2]; exon [dere_GLEANR_12016:1]; CDS [Dere\GG11962-cds]; intron [Dere\GG11962-in]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACCTACGAAGGTCAAAAGAAGGTTAGTACATCAGCAGACGAACTTCGAGGTGGGTGTGTGCTCCGTGCCGGGAATAATCTCGAAGCTGGGAGAAAATCTGAGTGGAAAAGTCGACGGCGAGCCTCCAGTCAGCGAGTTCCCCACTTGAAATTATCAGTTCCCAGCACTCCAATAGTAATCCCCTTGTCTTGTCCACCGATCCGCAGTTCTACGCAAATTTCAGCACCGACTGCACCGACAGCAACAGCGACACCAT
*********************************************************************..........((..((...(((...(((((.((....(((....(((.(((.....))).))))))....))..))))))))...))..))*****************************************************************************************************************************
Read size # Mismatch Hit Count Total Norm Total V108
head
V107
male body
M057
embryo
M055
female body
V040
embryo
GSM1528801
follicle cells
.....................................................................AACTTCGAGGTGGGTGTG...................................................................................................................................................................................................... 18 0 1 21.00 21 20 0 0 1 0 0
...................................................................CGAACTTCGAGGTGGGTG........................................................................................................................................................................................................ 18 0 1 3.00 3 3 0 0 0 0 0
................................................................AGACGAACTTCGAGGTGGGTGTG...................................................................................................................................................................................................... 23 0 1 3.00 3 1 1 0 0 1 0
............................................................................AGGTGGGTGTGTGCTCCG............................................................................................................................................................................................... 18 0 2 2.50 5 4 0 0 0 1 0
.............................................................AGCAGACGAACTTCGAGGTGGGT......................................................................................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0 0
...........................................................................................................................................................................................................................................TTCTACGCCAATTTCAGCACCGAT.......................... 24 2 1 2.00 2 0 0 0 0 0 2
................................................................AGACGAACTTCGAGGTGGG.......................................................................................................................................................................................................... 19 0 1 2.00 2 2 0 0 0 0 0
..................................................................ACGAACTTCGAGGTGGGGGTG...................................................................................................................................................................................................... 21 1 1 1.00 1 0 0 1 0 0 0
......................................................................ACTTCGAGGTGGGTGTGT..................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................................CTACGCAAATTTCAGCACCG............................ 20 0 1 1.00 1 0 1 0 0 0 0
.................................................................................................................................................................................................................................................GCAAATTTCAGCACCGACTGCAC..................... 23 0 1 1.00 1 0 0 1 0 0 0
.....................................................................................................................................................................................................................................................ATTTCAGCACCGACTGCACC.................... 20 0 1 1.00 1 0 0 1 0 0 0
......................................................................................................................................AAAAGTCGACGGCGAGCCTCCAGTCA............................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0 0
...............................................................................................................................................................................................................................................................CGACTGCACCGACAGCAACAGCGACA.... 26 0 1 1.00 1 0 0 0 1 0 0
......................................................................AGTTCGAGGTGGGTGTGT..................................................................................................................................................................................................... 18 1 1 1.00 1 0 1 0 0 0 0
......................................................GTACATCAGCAGACGAACTTCGAGG.............................................................................................................................................................................................................. 25 0 1 1.00 1 1 0 0 0 0 0
.....................................................................AACTTCGAGGTGGGTGTGTGCTCCGTG............................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0 0
.............................................................................................................................................................................................................................................................TCCGACTGCACCGACAGCAACAGCG....... 25 1 1 1.00 1 0 0 0 1 0 0
.....................................................................AACTTCGAGGTGTGTGTG...................................................................................................................................................................................................... 18 1 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................................................................................................................................................CGACTGCACCGACAGCAACAGC........ 22 0 1 1.00 1 0 0 1 0 0 0
........................................................ACATCAGCAGACGAACTTCGA................................................................................................................................................................................................................ 21 0 1 1.00 1 0 1 0 0 0 0
..................................................................................................................................................................GAGTTCCCCACTTGAAATTATCAGTT................................................................................................. 26 0 1 1.00 1 0 0 0 1 0 0
........................................................................................................................................................................................................ATAGTAATCCCCTTGTCTTGTCC.............................................................. 23 0 1 1.00 1 0 1 0 0 0 0
...........................................................................................................................AATCTGAGTGGAAAAGTCGAC............................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0
...................................................................CGAACTTCGAGGTGGGTGTGTG.................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................................................................................................CTTGTCCACCGATCCGCAGT................................................. 20 0 1 1.00 1 0 1 0 0 0 0
................................................................................................................................................................................................................................................CGCAAATTTCAGCACCGACTGC....................... 22 0 1 1.00 1 0 0 1 0 0 0
...........................................................................................................................................................................................................................................................GCACCGACTGCACCGACAGCAACAGC........ 26 0 1 1.00 1 0 0 0 0 1 0
......................................................................................................................................................................................................................................................................ACCGACAGCAACAGCGACA.... 19 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................................................................................CCGACTGCACCGACAGCAACAGCG....... 24 0 1 1.00 1 0 0 0 1 0 0
................................................................AGACGAACTTCGAGGTGGGTGTGT..................................................................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0
.....................................................................AACCTCGAGGTGGGTGTGTG.................................................................................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................AAATCTGAGTGGAAAAGACGACGGC.......................................................................................................................................... 25 1 1 1.00 1 0 0 1 0 0 0
........................................................................................................................................................................................................................................................TCAGCACCGACTGCACCGACAGCAACAGC........ 29 0 1 1.00 1 0 0 1 0 0 0
.................................................................................................................................AGTGGAAAAGTCGACGGC.......................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................................................TTCAGCACCGACTGCACCGACAGCAACA.......... 28 0 1 1.00 1 0 0 0 1 0 0
.....................................................AGTACATCAGCAGACGAACTTCGA................................................................................................................................................................................................................ 24 0 1 1.00 1 0 1 0 0 0 0
.........................................................CATCAGCAGACGAACTTCGAGTT............................................................................................................................................................................................................. 23 1 1 1.00 1 0 0 1 0 0 0
..................................................................................................................................................................................................................................GATCCGCAGTTCTACGCAAATTTCAGC................................ 27 0 1 1.00 1 0 0 1 0 0 0
.............................................................................................................................................................................................................................................CTATGCAAATTTCAGCACCGACTGCACC.................... 28 1 1 1.00 1 0 0 1 0 0 0
.....................................................................................................................................................................................................................................................ATTTCAGCACCGACTGCACCGACA................ 24 0 1 1.00 1 0 1 0 0 0 0
................................................................................................................................................................................................................................................................GACTGCACCGACAGCAACAGCGACACC.. 27 0 1 1.00 1 0 0 0 1 0 0
..............................................................GCAGACGAACTTCGAGGTGGGTGTG...................................................................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
.......................................................................CTTCGAGGTGGGTGTGTG.................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................................................................CCGACAGCAACAGCGACA.... 18 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................................................ACTGCACCGACAGCAACAGCGACACC.. 26 0 1 1.00 1 0 1 0 0 0 0
......................................................................ACTTCGAGGTGGGTGTGTGCT.................................................................................................................................................................................................. 21 0 1 1.00 1 0 0 0 1 0 0
..........................................................ATCAGCAGACGAACTTCG................................................................................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................TAAAATCTGAGTGGAAAAGT................................................................................................................................................. 20 1 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................CTTAGTGGAAAAGTCGACTGCG......................................................................................................................................... 22 2 1 1.00 1 0 0 0 1 0 0
.....................................................................................................................................................................................................................................................ATTTCAGCACCGACTGCACCGAC................. 23 0 1 1.00 1 0 0 0 1 0 0
..........................................................................................................................................................................................................................................GTTCTACGCAAATTTCAGCA............................... 20 0 1 1.00 1 1 0 0 0 0 0
..................................................................................................................................................................................ATTATCAGTTCCCAGCACTCCAATAGT................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0
....................................................................................................................................................................................................................................................................GCACCGACAGCAACAGCGACAC... 22 0 1 1.00 1 0 0 0 0 1 0
......................................................................ACTTCGAGGTGGGTGTGTGCTCCGTGCC........................................................................................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................................................................AGTAATCCCCTTGTCTTGTCCACCG.......................................................... 25 0 1 1.00 1 0 0 0 1 0 0
............................................................................AGGTGGGTGTGTGCTCCGTG............................................................................................................................................................................................. 20 0 2 0.50 1 1 0 0 0 0 0
.................................................AGTTAGTACATCGGGAGAC......................................................................................................................................................................................................................... 19 3 6 0.17 1 0 0 0 0 1 0
...................................................................................................GGAATAATGGGGAAGCTGGGA..................................................................................................................................................................... 21 3 7 0.14 1 0 0 0 0 1 0
.................................................................................................................................................................................................................................................................TCAGCACCGACAGCAACAGC........ 20 2 20 0.05 1 0 0 1 0 0 0

Anti-sense strand reads

AGGGTTTCGAAAAGTTCACGGTCACCTTCTGGATGCTTCCAGTTTTCTTCCAATCATGTAGTCGTCTGCTTGAAGCTCCACCCACACACGAGGCACGGCCCTTATTAGAGCTTCGACCCTCTTTTAGACTCACCTTTTCAGCTGCCGCTCGGAGGTCAGTCGCTCAAGGGGTGAACTTTAATAGTCAAGGGTCGTGAGGTTATCATTAGGGGAACAGAACAGGTGGCTAGGCGTCAAGATGCGTTTAAAGTCGTGGCTGACGTGGCTGTCGTTGTCGCTGTGGTA
*****************************************************************************************************************************..........((..((...(((...(((((.((....(((....(((.(((.....))).))))))....))..))))))))...))..))*********************************************************************
Read size # Mismatch Hit Count Total Norm Total V040
embryo
M055
female body
............................................................GACGTCTGCCTGAATCTCCACC........................................................................................................................................................................................................... 22 3 1 1.00 1 1 0
................................ATGCTTCCAGTTTTCCTCAT......................................................................................................................................................................................................................................... 20 3 3 0.33 1 0 1
................................ATGCTTCCAGTTTTCCTCGT......................................................................................................................................................................................................................................... 20 3 5 0.20 1 0 1
............AGTTCACCGTCACCTTATG.............................................................................................................................................................................................................................................................. 19 2 6 0.17 1 1 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4820:2040014-2040298 + der_921 TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACCTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACTTCGAGGTGGGTGTGTGCTCCGTGCCGG---G--AATAATCTCG-AAGCT---GGGAG--AAAATCTGAGTGG-------------------AAAAGTCGACGGCGAGCCTCCAGTCAGCGAGTTC-CCCAC--T---------------------------------TGAAATTATCAGTTCCCAGCACTC-------------------CA-AT---AGTAA---TCCCCT---T------GTCTTGTC--------CAC-CGA-TCCGCAGTTCTACGCAAATTTCAGCACCGACTG------CACC------GACAGCA------ACAGCGACACC----AT
droYak3 3R:26891510-26891790 - dya_1159 TTCCAAAGCTCTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACTTCGAGGTGGGTGTGTGCTCCGTGCCGG---G--ATTTATCTCG-AAACT---GGGGG--AAAATCTGAGTGG-------------------AAAAGTCGCCGGCGAGCCTCCAGTCATCGAGTCA-CCCAC--T---------------------------------TGATGTTATCAATTTTCAACACTC-------------------CA-AT---AGTAA---TCCCCT---C---A-A-----AT-----------------TTCGCAGTTCTTCGCAAATTTCAGCACCGATTG------CACCGACAGCGACAGCA------ACAGCAACAAC----AT
droSec2 scaffold_4:4812632-4812915 - dse_1304 TCCCAAAGCTTTTTAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATA---AGCAGACGAACTTCGAGGTGGGTGTGTGCTCTGTGCCGG---G--ATTAATCTCG-AATCT---GGG-G--AAAATCTGAGTGG-------------------AAAAGTCGACGGCGAGCCTCCATTCAACGAGTCC-CCCAC--T---------------------------------TGAAATTATCAGTTCCAAACACTC-------------------TA-AT---AATAG---TCCCCT---T------CTTTTGTC--------CAC-CGA-TCCGCAGTTCTACGCCAATTTCAGCACCGATTG------CACC------GACAGCA------ACAGCAACAAC----AT
droSim2 3r:25305298-25305581 - dsi_28675 TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATA---AGCAGACGAACTTCGAGGTGGGTGTGTGCTCTGTGCCGG---G--ATTAATCTCG-AATCT---GGG-G--AAAATCTGAGTGG-------------------AAAAGTCGACGACGAGCCTCCATTCAACGAGTTC-CCTAC--T---------------------------------TGAAATTATCAGTTCCAAACACTC-------------------TA-AT---AATAG---TCCCCT---T------CTTTTGTC--------CAC-CGA-TCCGCAGTTCTACGCCAATTTCAGCACCGATTG------CACC------GACAGCA------ACAGCAACAAC----AT
dm3 chr3R:25959767-25960050 - TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATA---AGCAGACGAACTTCGAGGTGGGTGTGTGCTCTGTGCCGG---G--ATTAATCTCG-AATCT---GGG-A--AAAATCTGAGTGG-------------------AAAAGTCGACGGCGAGCCTCCAGTCATCGAGTTA-CCCAC--T---------------------------------TGAAATTATCAGTTCCAAACACTC-------------------TA-AT---AGCAG---TCCCCT---T------GTTTTGTC--------CCC-CGA-TCCGCAGTTCTACGCCAATTTCAGCACCGATTG------CACC------GACAGCA------ACAGCAACAAC----AT
droEug1 scf7180000409555:443992-444270 - TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACATACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACTTCGAGGTGGGTGTGTG-------CCGG---G--ATTAATCTCG-AAATT---GAA-A--GAAAACTGAAAGG-------------------AAAAGTTTGCGGCGAGCCTCCAGTCATCGAATTC-CCCAC--T---------------------------------TGAAATTATCAGTTCCAAACACTC-------------------GA-CT---AACTC---TCCCGTACTA-------TTTTATC--------CCT-CGA-CCCGTAGTTCTACGCCAATTTTAGCACCGACTG------CACC------GAAGACA------GCAACAACATGAG----
droBia1 scf7180000302113:1425105-1425366 + TCCCAAAGCTCTTCAAGTGCCAGTGGAAGACGTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACCTCGAGGTGGGT-------------CGG---G--CAAAATCGAG-AAAAT---AGG-G--GATAACTAAGAGG-------------------AAAAGTTGACGGCGAGCCTCCCGTCACCGAGACA-CCCAC--C---------------------------------TGAACCTATCAGTTCCCAACACTC-------------------GA-CT---TATAG---ACA------C----------------------CC--CTG-TTCCCAGTTCTACGCCAATTTCAGTACCGAGTG------CACC------GACAGCAACA---CCAGCGACACC----AT
droTak1 scf7180000415765:391350-391629 - TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATCAGCAGCAGACGAACTACGAGGTGGGTGTGTT-------TTAGAGCA--ATCTCCTCCG-AATTAAAGGAG-G--AAAATC--AAAGG-------------------AAAAGTGGGTGACGAGCCTCCATTCA-------------C--T---------------------------------TGAAATTATCAGTTCCAAACATTC-------------------GA-CTTATAG-AG---ACCCCT---A------TTTCGTAT--------CGC-CTA-TCCCCAGTTCTACGCCAATTTCAGTACCGATTG------CAGC------GACAGCAACAACAGCAATAGCAAC----AT
droEle1 scf7180000491280:2249897-2250167 - TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACATACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAGCTTCGAGGTGGGTGTGTG-------CCGG--TA--ATTTCTCCTG-AAATT---TGGCC--AATTACTAAACGG-------------------AAAAGTTAACGGCGAGCCTCCAGTCA-------------C--T---------------------------------CGAAATTACCAGTTTCAAACACTC-------------------GA-CT---TACTT---TCCACT---A------TTTTACAC--------CCC-CGACTTTGCAGTTCTACGCCAATTTCAGCACCGATTG---TAACACC------GACAACA------ACAGCAACATGAG----
droRho1 scf7180000779336:462-738 + TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACTTCGAGGTGGGTGTGTG-------CCGG--TA--ATTTCTCTCG-AAATT---AGG-C--AAAAATGAAAAGG-------------------AAAAGTTAACGGCGAGCCTCCATTCATCGAATCTCCCCAC--T---------------------------------TAAAATTATCAGTTCCAAACACTC-------------------AA-CT---AACTT--------TACTACT-------TTATC--------CCT-CGACCTCGCAGTTCTACGCCAATTTCAGCACCGACTG------TATC------GACAACA------ACAGCAACATGAG----
droFic1 scf7180000454073:3379802-3380076 + TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACCTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGGACTTCGAGGTGGGTGTGTG-------CCGG--CG--ATCTCTCCGG-AAATT---CAG-G--AAAACCTGAAAGA-------------------AAAAGTGACCGGCAAGCCTCCTGTCACCAAATTA-CCC-C--T---------------------------------TGAGCTTACCGGCTCGGAACTCTCCACCA-GTCA---CT-GATAAACT---AACC---------AAT-------------------------CC-CGA-TCCGCAGTTCTACGCCAATTTCAGCACCGATTG------CATC------GACACC---------AACAACATGAG----
droKik1 scf7180000302261:408709-408980 - TCCCAAAGCTCTTCAAGTGCCAGTGGAAGACGTACGAAGGTCAGAAGAAGGTTAGT----ACATCATCAGCAGACGGACTTCGAGGTGGGTGTGTG-------CCGGGCCGTGCCTGG-CC-GGGATTT---CAG-GGGACTTTCT--GGCC-------------------CAAAGTTGGCTGCGAGTCTCCAGTCATT------------------------------------------------CGTAGCC---------CAACAGTT----------CCAGACCCAAA-CT---CACT---------TTCATCCGT-------ATCTT------CT------CCGGCAGTTCTTTGCCAATTTCAGCACCGAAAACATCATCACC------GCCAGCA------ACAGCAACAAC----AT
droAna3 scaffold_13340:20949421-20949678 - dan_3206 TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTATGAAGGTCAGAAGAAGGTTAGT----ACA------GCAGA----CTTCGAGGTGGGTGTGTG-------CCGG---A--ATCTCTAACA-A--------------AAAATT---ATTA-------------------AAAAGTTGACTAGGATTTATCTATCAAA---TTA--------T---------------------------------AAAAATTATTTGTTTTACTCACTTGACCTGGCTA---CC----AA-CT---AACTCGTC-----AACCTCTTCAC-----CTTTA-------T------CCGGCAGTTTTACGCCAATTTCAGTACCGACTG------CAAC------GAGAGC------------AACATGAGCG--
droBip1 scf7180000396413:1452550-1452811 + TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTATGAAGGTCAGAAGAAGGTTAGT----A-------AGCAGA----CTTCGAGGTGGGTGTGTG-------CCGG---A--ATCTCTAACA-A---------------AAATT---ATT--------AATTAAATAAGAAAAAGTTGACGGGGAGTTTTCAATCATT-----C-CCCA--------------------------------------AAAATTATTAGTCTTACACACTTGACCTGGCAA---CC----GA-CT---AACTCGCC-----AACCTCTTTAC-----CTTTT-------T------CCGGCAGTTTTACGCCAATTTCAGCACCGACTG------CAAC------GAGAGC------------AA---C----AT
dp5 2:1545532-1545759 + dps_292 TCCCAAAGCTTTCAAAGCGCCCGTCG---------GAAGGTCAGAAGAAGGTTAGC----AAACT---T-----------------------------------------------CTTAGCG-AAATT---GT--------AAGTAAAAGA-------------------AAAAGTTGACGGCGAATTTCTAATCATTTCATTT-CTTTCA--------------ACA-CTGCCCGTAT-------CGAAATTACCG-TTTTCAACATCT-------------------AA-CT---AACT---------TACTCTTGC-------ATTCTTGCGGA-CC-CGG-CCTGAAGCTCTACGCAAACTTCAGCACAA---------------------------------ACAGCAAAATGAG----
droPer2 scaffold_7:4348434-4348665 + TCCCAAAGCTTTCAAAGCGCCCGTCG---------GAAGGTCAGAAGAAGGTTAGC----AAACT---T-----------------------------------------------CTTAGCG-AAATT---GT--------AAGTAAAAGA-------------------AAAAGTTGACGGCGAATTTCTAATCATTTCATTT-CTTTCA--------------ACA-CTGCCCGTAT-------CGAAATTACCG-TTTTCAACATCT-------------------AA-CT---AACT---------TACTCTTGC-------ATTCTTGCGGA-CC-CGG-CCTGAAGCTCTACGCAAACTTCAGCACAGACA---------------------------------GCAAAATGAGCGCC
droWil2 scf2_1100000004943:9413778-9414032 - dwi_3397 TTCCAAAGCTTTTCAAGTGCCAATGGAAGACATATGAAGGTCAGAAGAAGGTTAGT----ACATC---AGTAGATTGCATTCGAGGTGGGTGTGTT-------T----------------GCG-AAA--------------------------------------------------TAGCGGCGATTTTTCTATCAAATCTATC-T--ATATCTGTGCACATATAACAATTGCT--TAT-------CAAAATTTCCAGTAATTGGAGTTT-------------------AA-CT---ATAT----T----TCCTTTCTT-------ATTTTTCC---GGC-CGG-CAAATAGTTTTACGCAGACTTCAGTACAGA------------------------CA------ACAGCAACATGAG----
droVir3 scaffold_12855:3594833-3595104 - dvi_3748 TTCCTAAGCTTTTCAAGTGCCAATGGAAGACGTATGAAGGTCAGAAGAAGGTTAGT----ACATC---GTTTCATTACGTTCGAGGTGGGTGTGTT-------TAGG-CCA--------------------------------AGTAAAACCAAAATTAAAGCAAATAAATCATTTTTTACGGCGATTTATCAATCAAA--ATTT-TGCAT--T-----------------TAGT--TAA-------CAAAATTATCAATTTGTAGCAGCT-------------------AA-AT---TAATG---TTTGG----------------TTTTTTCCACA-CTCCGG-CGTGCAGCTTTACGCGAATTTCAGTGCAGACTC------CGTT---------------------AAGAACATGGC----
droMoj3 scaffold_6540:7886427-7886704 - dmo_1861 TTCCAAAGCTTTTCAAGTGCCAATGGAAGACATATGAAGGTCAGAAGAAGGTTAGTTAGTACATC---ATTTGATTACATTCGAGGTGGGTCTCTG-------TCGT-CCG--TTTAAATACG-AAT-------------AAAAGTAAAAGTG------------------AACTTTTCCCGGCGATTTATTAATCAAAATTT-T-AGCAT--T-----------------TACT--ACCTAACACTCAAAATTTCTCTTATCCAATATTT-------------------TA-AT---GTTTG---ATA------T------CTCTTACT--------TTC-CGG-CGTGCAGCTCTACGCGAACTTCTCCAAAGA---------CACC------GTC------------AGCAACATGAG----
droGri2 scaffold_14906:6254881-6255128 - TTCCAAAGCTTTTCAAGTGCCAATGGAAGACATATGAAGGTCAGAAGAAGGTTAGTTAGTACATC---ATTTGATTACGCTCGAGGTGGGTGCGTTTTTT-----------------TCAGC--AAA-------------TAAAGTAAAAGCA------------------AAAATCAAGCGACGATTCATCAATCAAAACCTTT-TGCAT--A-----------------TACT------------TAACAACATTATTAT--------------------------------T---AACTT---TAAT-A---T------ATTCTGTT--------TTG-CGG-TGTGCAGCTCTTTGCGAATTTCAACACAGACTC------A------------------------AACAACATGGC----

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACCTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACTTCGAGGTGGGTGTGTGCTCCGTGCCGG---G--AATAATCTCG-AAGCT---GGGAG--AAAATCTGAGTGG-------------------AAAAGTCGACGGCGAGCCTCCAGTCAGCGAGTTC-CCCAC--T---------------------------------TGAAATTATCAGTTCCCAGCACTC-------------------CA-AT---AGTAA---TCCCCT---T------GTCTTGTC--------CAC-CGA-TCCGCAGTTCTACGCAAATTTCAGCACCGACTG------CACC------GACAGCA------ACAGCGACACC----ATSizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
............................................................................AACTTCGAGGTGGGTGTG...........................................................................................................................................................................................................................................................................................................................................18121.002110000200
..........................................................................CGAACTTCGAGGTGGGTG.............................................................................................................................................................................................................................................................................................................................................1813.0030000030
.......................................................................AGACGAACTTCGAGGTGGGTGTG...........................................................................................................................................................................................................................................................................................................................................2313.0030001110
...................................................................................AGGTGGGTGTGTGCTCCG....................................................................................................................................................................................................................................................................................................................................1822.5050001040
....................................................................AGCAGACGAACTTCGAGGTGGGT..............................................................................................................................................................................................................................................................................................................................................2312.0020000020
.......................................................................AGACGAACTTCGAGGTGGG...............................................................................................................................................................................................................................................................................................................................................1912.0020000020
.............................................................................ACTTCGAGGTGGGTGTGT..........................................................................................................................................................................................................................................................................................................................................1811.0010000010
...................................................................................................................................................................................................................................................................................................................................................................CTACGCAAATTTCAGCACCG..................................................2011.0010000100
.......................................................................................................................................................................................................................................................................................................................................................................GCAAATTTCAGCACCGACTG------CAC.....................................2311.0010100000
...........................................................................................................................................................................................................................................................................................................................................................................ATTTCAGCACCGACTG------CACC------..............................2011.0010100000
...........................................................................................................................................................................AAAAGTCGACGGCGAGCCTCCAGTCA....................................................................................................................................................................................................................................2611.0010000100
.....................................................................................................................................................................................................................................................................................................................................................................................CGACTG------CACC------GACAGCA------ACAGCGACA........2611.0011000000
......................................................GT----ACATC---AGCAGACGAACTTCGAGG...................................................................................................................................................................................................................................................................................................................................................2511.0010000010
............................................................................AACTTCGAGGTGGGTGTGTGCTCCGTG..................................................................................................................................................................................................................................................................................................................................2711.0010000010
.....................................................................................................................................................................................................................................................................................................................................................................................CGACTG------CACC------GACAGCA------ACAGC............2211.0010100000
............................................................ACATC---AGCAGACGAACTTCGA.....................................................................................................................................................................................................................................................................................................................................................2111.0010000100
.......................................................................................................................................................................................................GAGTTC-CCCAC--T---------------------------------TGAAATTATCAGTT....................................................................................................................................................................2611.0011000000
.....................................................................................................................................................................................................................................................................................................AT---AGTAA---TCCCCT---T------GTCTTGTC--------C......................................................................................2311.0010000100
.............................................................................................................................................AATCTGAGTGG-------------------AAAAGTCGAC....................................................................................................................................................................................................................................................2111.0010100000
..........................................................................CGAACTTCGAGGTGGGTGTGTG.........................................................................................................................................................................................................................................................................................................................................2211.0010000010
....................................................................................................................................................................................................................................................................................................................................CTTGTC--------CAC-CGA-TCCGCAGT.......................................................................2011.0010000100
......................................................................................................................................................................................................................................................................................................................................................................CGCAAATTTCAGCACCGACTG------C.......................................2211.0010100000
.................................................................................................................................................................................................................................................................................................................................................................................GCACCGACTG------CACC------GACAGCA------ACAGC............2611.0010001000
..................................................................................................................................................................................................................................................................................................................................................................................................ACC------GACAGCA------ACAGCGACA........1911.0010000010
....................................................................................................................................................................................................................................................................................................................................................................................CCGACTG------CACC------GACAGCA------ACAGCG...........2411.0011000000
.......................................................................AGACGAACTTCGAGGTGGGTGTGT..........................................................................................................................................................................................................................................................................................................................................2411.0010000100
..............................................................................................................................................................................................................................................................................................................................................................................TCAGCACCGACTG------CACC------GACAGCA------ACAGC............2911.0010100000
...................................................................................................................................................AGTGG-------------------AAAAGTCGACGGC.................................................................................................................................................................................................................................................1811.0010000010
.............................................................................................................................................................................................................................................................................................................................................................................TTCAGCACCGACTG------CACC------GACAGCA------ACA..............2811.0011000000
.....................................................AGT----ACATC---AGCAGACGAACTTCGA.....................................................................................................................................................................................................................................................................................................................................................2411.0010000100
.......................................................................................................................................................................................................................................................................................................................................................GA-TCCGCAGTTCTACGCAAATTTCAGC......................................................2711.0010100000
...........................................................................................................................................................................................................................................................................................................................................................................ATTTCAGCACCGACTG------CACC------GACA..........................2411.0010000100
......................................................................................................................................................................................................................................................................................................................................................................................GACTG------CACC------GACAGCA------ACAGCGACACC----..2711.0011000000
.....................................................................GCAGACGAACTTCGAGGTGGGTGTG...........................................................................................................................................................................................................................................................................................................................................2511.0010000010
..............................................................................CTTCGAGGTGGGTGTGTG.........................................................................................................................................................................................................................................................................................................................................1811.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................CC------GACAGCA------ACAGCGACA........1811.0010000010
.......................................................................................................................................................................................................................................................................................................................................................................................ACTG------CACC------GACAGCA------ACAGCGACACC----..2611.0010000100
.............................................................................ACTTCGAGGTGGGTGTGTGCT.......................................................................................................................................................................................................................................................................................................................................2111.0011000000
..............................................................ATC---AGCAGACGAACTTCG......................................................................................................................................................................................................................................................................................................................................................1811.0010000010
...........................................................................................................................................................................................................................................................................................................................................................................ATTTCAGCACCGACTG------CACC------GAC...........................2311.0011000000
................................................................................................................................................................................................................................................................................................................................................................GTTCTACGCAAATTTCAGCA.....................................................2011.0010000010
...........................................................................................................................................................................................................................................................ATTATCAGTTCCCAGCACTC-------------------CA-AT---AGT............................................................................................................................2711.0010000100
..........................................................................................................................................................................................................................................................................................................................................................................................G------CACC------GACAGCA------ACAGCGACAC.......2211.0010001000
.............................................................................ACTTCGAGGTGGGTGTGTGCTCCGTGCC................................................................................................................................................................................................................................................................................................................................2811.0010000010
..........................................................................................................................................................................................................................................................................................................AGTAA---TCCCCT---T------GTCTTGTC--------CAC-CG.................................................................................2511.0011000000
...................................................................................AGGTGGGTGTGTGCTCCGTG..................................................................................................................................................................................................................................................................................................................................2020.5010000010
droYak3
TTCCAAAGCTCTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACTTCGAGGTGGGTGTGTGCTCCGTGCCGG---G--ATTTATCTCG-AAACT---GGGGG--AAAATCTGAGTGG-------------------AAAAGTCGCCGGCGAGCCTCCAGTCATCGAGTCA-CCCAC--T---------------------------------TGATGTTATCAATTTTCAACACTC-------------------CA-AT---AGTAA---TCCCCT---C---A-A-----AT-----------------TTCGCAGTTCTTCGCAAATTTCAGCACCGATTG------CACCGACAGCGACAGCA------ACAGCAACAAC----ATSizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
............................................................................AACTTCGAGGTGGGTGTG...........................................................................................................................................................................................................................................................................................................................................1817.00700500110000
....................................................................................................................................................................................................................................................................................................................................................................TTCGCAAATTTCAGCACCGATTG------CACC....................................2715.00503200000000
.............................................................................................................................................................................................................................................................................................................................................................................TTCAGCACCGATTG------CACCGACAGCGAC...........................2712.00202000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TG------CACCGACAGCGACAGCA------AC...............2111.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................CTTCGCAAATTTCAGCACC...................................................1911.00101000000000
.............................................................................ACTTCGAGGTGGGTGTGTGCTCCG....................................................................................................................................................................................................................................................................................................................................2411.00100010000000
............TCAAGTGCCAGTGGAAGACT.........................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000
..............AAGTGCCAGTGGAAGACTTACGA....................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000010000
............................................................................AACTTCGAGGTGGGTGTGTGCTCCG....................................................................................................................................................................................................................................................................................................................................2511.00100100000000
...........................................................................GAACTTCGAGGTGGGTGTG...........................................................................................................................................................................................................................................................................................................................................1911.00100000010000
.......................................................T----ACATC---AGCAGACGAACTTCGAGGTG.................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
...............................................................TC---AGCAGACGAACTTCGAGT...................................................................................................................................................................................................................................................................................................................................................2011.00100010000000
...................................................................................................................................................................................................................................................................................................................................................................CTTCGCAAATTTCAGCACCGATTG------........................................2411.00101000000000
.............................................................CATC---AGCAGACGAACTTCGA.....................................................................................................................................................................................................................................................................................................................................................2011.00100000010000
....................................................TAGT----ACATC---AGCAGACGAACTTCGAG....................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................CGCAAATTTCAGCACCGAT................................................1911.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................TTTCAGCACCGATTG------CACCGACAGCGAC...........................2811.00101000000000
...........................................................................................................................................AAAATCTGAGTGG-------------------AAAAGTCGCCGGC.................................................................................................................................................................................................................................................2611.00100100000000
.....................................................................GCAGACGAACTTCGAGGTGGGTG.............................................................................................................................................................................................................................................................................................................................................2311.00100100000000
.......................................................................................................................................................................................................................................................................................................................................................................GCAAATTTCAGCACCGATTG------CACCGAC.................................2711.00100100000000
.................................................................................................................................................................................................................................................................................................................................................................................GCACCGATTG------CACCGACAGCGACA..........................2411.00100100000000
......................................................................................................................................................................................................................................................................................................................................................................CGCAAATTTCAGCACCGATTG------CACCGAC.................................2811.00101000000000
...............................................................TC---AGCAGACGAACTTCGAGG...................................................................................................................................................................................................................................................................................................................................................2011.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................CTTCGCAAATTTCAGCACCGATTG------C.......................................2511.00100100000000
.............................................................................................................................................................................................................................................................................................................................................................................TTCAGCACCGATTG------CACCGAC.................................2111.00100100000000
.................................................................................................................................................................................................................................................................................................................................................................................................CACCGACAGCGACAGCA------ACA..............2011.00100010000000
.......................................................T----ACATC---AGCAGACGAACTTCGAGT...................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
............................................................................................................................................................................................................................................................................................................................................................................TTTCAGCACCGATTG------CACCGACAGC..............................2511.00101000000000
.................................................................................CGAGGTGGGTGTGTGCTCCG....................................................................................................................................................................................................................................................................................................................................2020.50101000000000
droSec2
TCCCAAAGCTTTTTAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATA---AGCAGACGAACTTCGAGGTGGGTGTGTGCTCTGTGCCGG---G--ATTAATCTCG-AATCT---GGG-G--AAAATCTGAGTGG-------------------AAAAGTCGACGGCGAGCCTCCATTCAACGAGTCC-CCCAC--T---------------------------------TGAAATTATCAGTTCCAAACACTC-------------------TA-AT---AATAG---TCCCCT---T------CTTTTGTC--------CAC-CGA-TCCGCAGTTCTACGCCAATTTCAGCACCGATTG------CACC------GACAGCA------ACAGCAACAAC----ATSizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
............................................................................AACTTCGAGGTGGGTGTG...........................................................................................................................................................................................................................................................................................................................................18134.003431723
..........................................................................CGAACTTCGAGGTGGGTGTG...........................................................................................................................................................................................................................................................................................................................................20110.00101207
............................................................................AACTTCGAGGTGGGTGTGTGCTCTG....................................................................................................................................................................................................................................................................................................................................2516.0060321
............................................................................AACTTCGAGGTGGGTGTGTG.........................................................................................................................................................................................................................................................................................................................................2016.0060303
..........................................................................CGAACTTCGAGGTGGGTG.............................................................................................................................................................................................................................................................................................................................................1815.0051004
............................................................................AACTTCGAGGTGGGTGTGTGCT.......................................................................................................................................................................................................................................................................................................................................2214.0040112
...........................................................................GAACTTCGAGGTGGGTGTG...........................................................................................................................................................................................................................................................................................................................................1914.0041102
...................................................................................AGGTGGGTGTGTGCTCTG....................................................................................................................................................................................................................................................................................................................................1813.0031011
..........................................................................CGAACTTCGAGGTGGGTGTGTG.........................................................................................................................................................................................................................................................................................................................................2213.0031101
...........................................................................GAACTTCGAGGTGGGTGTGTG.........................................................................................................................................................................................................................................................................................................................................2113.0030102
...................................................................................AGGTGGGTGTGTGCTCTGTGC.................................................................................................................................................................................................................................................................................................................................2112.0020101
.....................................................................GCAGACGAACTTCGAGGTGGGTGTG...........................................................................................................................................................................................................................................................................................................................................2512.0020002
............................................................................AACTTCGAGGTGGGTGTGTGCTCT.....................................................................................................................................................................................................................................................................................................................................2412.0021100
.........................................................................ACGAACTTCGAGGTGGGTGTG...........................................................................................................................................................................................................................................................................................................................................2112.0020101
............................................................................AACTTCGAGGTGGGTGTGTGCTCTGT...................................................................................................................................................................................................................................................................................................................................2612.0020200
........................................................................GACGAACTTCGAGGTGGGTGTG...........................................................................................................................................................................................................................................................................................................................................2212.0020002
.........................................................................ACGAACTTCGAGGTGGGTG.............................................................................................................................................................................................................................................................................................................................................1912.0020002
...........................................................................GAACTTCGAGGTGGGTGTGTGCTCTG....................................................................................................................................................................................................................................................................................................................................2611.0010100
...............................................................TA---AGCAGACGAACTTCGAGGTGGGTGTG...........................................................................................................................................................................................................................................................................................................................................2811.0010100
...................................................................................AGGTGGGTGTGTGCTCTGTGCCGG---...........................................................................................................................................................................................................................................................................................................................2411.0010001
...............................................................TA---AGCAGACGAACTTCGAGGTGGGTG.............................................................................................................................................................................................................................................................................................................................................2611.0010001
........................................................................GACGAACTTCGAGGTGGGTGTGTGC........................................................................................................................................................................................................................................................................................................................................2511.0010001
.........................................................................ACGAACTTCGAGGTGGGTGTGTGCT.......................................................................................................................................................................................................................................................................................................................................2511.0010100
........................................................................GACGAACTTCGAGGTGGGTGTGTG.........................................................................................................................................................................................................................................................................................................................................2411.0010001
...........................................................................GAACTTCGAGGTGGGTGT............................................................................................................................................................................................................................................................................................................................................1811.0010001
............................................................................AACTTCGAGGTGGGTGTGT..........................................................................................................................................................................................................................................................................................................................................1911.0010010
..............................................................................................................................................................................AGTCGACGGCGAGCCTCCA........................................................................................................................................................................................................................................1911.0011000
...........................................................................GAACTTCGAGGTGGGTGTGTGCTCTGT...................................................................................................................................................................................................................................................................................................................................2711.0010001
................................................................................................................................................................................................................................................................................................................................................................................AGCACCGATTG------CACC------GACAGCA------ACA..............2511.0010010
..............................................................ATA---AGCAGACGAACTTCGA.....................................................................................................................................................................................................................................................................................................................................................1911.0010010
...............................................................................................................................................................................................................................................................................................................................................................................CAGCACCGATTG------CACC------GACAGCA------AC...............2511.0010010
.....................................................................................GTGGGTGTGTGCTCTGTGC.................................................................................................................................................................................................................................................................................................................................1911.0011000
...................................................................................AGGTGGGTGTGTGCTCTGTGCCGG---G--AT......................................................................................................................................................................................................................................................................................................................2711.0010100
............................................................................AACTTCGAGGTGGGTGTGTGCTCTGTG..................................................................................................................................................................................................................................................................................................................................2711.0011000
.........................................................................ACGAACTTCGAGGTGGGTGTGTG.........................................................................................................................................................................................................................................................................................................................................2311.0010100
...................................................................................AGGTGGGTGTGTGCTCTGTGCC................................................................................................................................................................................................................................................................................................................................2211.0010001
........................................................................................................................................................................................GAGCCTCCATTCAACGAGTCC-CC.........................................................................................................................................................................................................................2311.0010100
.................................................................................CGAGGTGGGTGTGTGCTC......................................................................................................................................................................................................................................................................................................................................1811.0010001
.......................................................................AGACGAACTTCGAGGTGGGTGTGTGCT.......................................................................................................................................................................................................................................................................................................................................2711.0010100
............................................................................AACTTCGAGGTGGGTGTGTGCTC......................................................................................................................................................................................................................................................................................................................................2311.0010010
...................................................................................AGGTGGGTGTGTGCTCTGTGCCGG---G--........................................................................................................................................................................................................................................................................................................................2511.0010001
..............................................................................................................................................................................................................................................................................................................G---TCCCCT---T------CTTTTGTC--------CAC-CGA-TCCGCAG........................................................................2911.0010100
..........................................................................................................................G-AATCT---GGG-G--AAAATCTGAGTG..................................................................................................................................................................................................................................................................................2211.0011000
droSim2
TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATA---AGCAGACGAACTTCGAGGTGGGTGTGTGCTCTGTGCCGG---G--ATTAATCTCG-AATCT---GGG-G--AAAATCTGAGTGG-------------------AAAAGTCGACGACGAGCCTCCATTCAACGAGTTC-CCTAC--T---------------------------------TGAAATTATCAGTTCCAAACACTC-------------------TA-AT---AATAG---TCCCCT---T------CTTTTGTC--------CAC-CGA-TCCGCAGTTCTACGCCAATTTCAGCACCGATTG------CACC------GACAGCA------ACAGCAACAAC----ATSizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
............................................................................AACTTCGAGGTGGGTGTG...........................................................................................................................................................................................................................................................................................................................................1818.00810010200004000000
...................................................................................AGGTGGGTGTGTGCTCTG....................................................................................................................................................................................................................................................................................................................................1815.00501000000003100000
.............................................................................................................................................................................AAGTCGACGACGAGCCTCC.........................................................................................................................................................................................................................................1912.00220000000000000000
......................................................................CAGACGAACTTCGAGGTGGGTGTGTG.........................................................................................................................................................................................................................................................................................................................................2611.00110000000000000000
.......................................................................................................................................................G-------------------AAAAGTCGACGACGAGCCTCC.........................................................................................................................................................................................................................................2211.00101000000000000000
...CAAAGCTTTTCAAGTGCCAGT.................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
.............................................................................................................................ATCT---GGG-G--AAAATCTGAGTGG-------------------AA............................................................................................................................................................................................................................................................2311.00100000000010000000
...............................................................TA---AGCAGACGAACTTCGAGGTGGGTG.............................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
........................................................................GACGAACTTCGAGGTGGGTGTG...........................................................................................................................................................................................................................................................................................................................................2211.00100000000001000000
...................................................................................................................................................................................................CAACGAGTTC-CCTAC--T---------------------------------TGAAATTATC........................................................................................................................................................................2611.00100000000000100000
..........................................................................CGAACTTCGAGGTGGGTGTGTGCTCTG....................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
....................................................................................................................................................................................................................................................................................................................................................................TACGCCAATTTCAGCACCGATTG------CACC------..............................2711.00100000000000010000
............................................................................AACTTCGAGGTGGGTGTGTGCTCTG....................................................................................................................................................................................................................................................................................................................................2511.00100000000000100000
...............................TTACGAAGGTCAAAAGAAG.......................................................................................................................................................................................................................................................................................................................................................................................1911.00100001000000000000
..............................................................ATA---AGCAGACGAACT.........................................................................................................................................................................................................................................................................................................................................................1511.00100000001000000000
..........................................................................CGAACTTCGAGGTGGGTG.............................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
............................................................................AACTTCGAGGTGGGTGTGTGCTCTGT...................................................................................................................................................................................................................................................................................................................................2611.00110000000000000000
.....................................................AGT----ACATA---AGCAGACGAACTTCGAGT...................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
................................................................A---AGCAGACGAACTTCGAGT...................................................................................................................................................................................................................................................................................................................................................1911.00100010000000000000
.....................................................................................................................................................TGG-------------------AAAAGTCGACGACGAGCCT...........................................................................................................................................................................................................................................2211.00100000000001000000
.....................................................AGT----ACATA---AGCAGACGAACTTCGAG....................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
...................................................................................AGGTGGGTGTGTGCTCTGTGCCGG---G--AT......................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
................................................................................................................................................CTGAGTGG-------------------AAAAGTCGACGG..................................................................................................................................................................................................................................................2011.00100000000000010000
.........................................................................................GTGTGTGCTCTGTGCCGG---G--A.......................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
........................................................................GACGAACTTCGAGGTGGGTGTGTGCT.......................................................................................................................................................................................................................................................................................................................................2611.00100000000000001000
...............................................................TA---AGCAGACGAACTTCGAGGTAT................................................................................................................................................................................................................................................................................................................................................2311.00100000000000001000
......................................................................................TGGGTGTGTGCTCTGTGC.................................................................................................................................................................................................................................................................................................................................1811.00100000000001000000
..........................................................................CGAACTTCGAGGTGGGTGTG...........................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
...............................................................TA---AGCAGACGAACTTCGAGT...................................................................................................................................................................................................................................................................................................................................................2011.00110000000000000000
dm3
TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATA---AGCAGACGAACTTCGAGGTGGGTGTGTGCTCTGTGCCGG---G--ATTAATCTCG-AATCT---GGG-A--AAAATCTGAGTGG-------------------AAAAGTCGACGGCGAGCCTCCAGTCATCGAGTTA-CCCAC--T---------------------------------TGAAATTATCAGTTCCAAACACTC-------------------TA-AT---AGCAG---TCCCCT---T------GTTTTGTC--------CCC-CGA-TCCGCAGTTCTACGCCAATTTCAGCACCGATTG------CACC------GACAGCA------ACAGCAACAAC----ATSizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
............................................................................AACTTCGAGGTGGGTGTG...........................................................................................................................................................................................................................................................................................................................................1811029.00102900000000000000000000001000000000000002001100200110022000000000000000000000000000000000010002001001000120014100000001000000000000000000000000000001110340040000000667300100000000000000340000031000007120000000000000123813131010100110020000000203004101300006819193668811199540116182472100000000451702211010412450429629012100412150273672239312529171483110079403490
...................................................................................AGGTGGGTGTGTGCTCTG....................................................................................................................................................................................................................................................................................................................................181514.0051400000000000000000000000000000000000000010010000000000000000000000000000000000000000000010005001201000017013110000010000000000000000000000000000000000010000020000000030010000000000000000000000110000004000000000000040160002110111120000000508007284001043231001426923411544249430000000026401110040321140215111122001131211641511117915101500200000315121550
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...............................................................................TTCGAGGTGGGTGTGTGC........................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................G------CACC------GACAGCA------ACAGCA...........1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................AGCACCGATTG------CACC------GACAGCA------.................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................GATTG------CACC------GACAGCA------ACAGCAACA........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................ACACTC-------------------TA-AT---AGCAG---TCCC...................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
........................................................................GACGAACTTCGAGGTGGGTGTGTT.........................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................TCG-AATCT---GGG-A--AAAATCTGAGTGG-------------------AA............................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................CTTCGAGGTGGGTGTGTGCTCTGT...................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TTCAGCACCGATTG------CACC------GACAG.........................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................TCG-AATCT---GGG-A--AAAATCTGAGTGG-------------------..............................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................CAGACGAACTTCGAGGTGGGTGTGT..........................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................GCACCGATTG------CACC------GACAGCA------ACAGC............2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................T---GGG-A--AAAATCTGAGTGG-------------------AAAAGTC.......................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................GGG-A--AAAATCTGAGTGG-------------------AAAAGTC.......................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................TTTGTC--------CCC-CGA-TCCGCAGTT......................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TG------CACC------GACAGCA------ACAGCA...........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TACGCCAATTTCAGCACCGATTG------CACC------..............................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................CTCG-AATCT---GGG-A--AAAATCTGAGTGG-------------------AA............................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................GGTGGGTGTGTGCTCTGTGCCGG---G--A.......................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
.................................................................................CGAGGTGGGTGTGTGCTCTGTGCCAT---C--........................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................ATA---AGCAGACGAACTTCG......................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................GGG-A--AAAATCTGAGTGG-------------------AAAAGT........................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................CAGCACCGATTG------CACC------GACAGCA------AC...............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...CAAAGCTTTTCAAGTGCCAGTGG...............................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................CAATTTCAGCACCGATTG------CACC------GAC...........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................CACC------GACAGCA------ACAGCAAC.........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................AGTTCTACGCCAATTTCAGCA.....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................ATCTGAGTGG-------------------AAAAGTCGACGGCATC..............................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TCAGCACCGATTG------CACC------GA............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................CAGACGAACTTCGAGGTGGGTGTGTG.........................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....................................................................................GGTGGGTGTGTGCTCTGTGCCGG---G--........................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................ACCGATTG------CACC------GACAGCA------ACAGCA...........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................CTTCGAGGTGGGTGTGTGCTC......................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................TGAGTGG-------------------AAAAGTCGACGGC.................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................CGCCAATTTCAGCACCGATTG------........................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................CGAACTTCGAGGTGGGTGTT...........................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................CCAATTTCAGCACCGATTG------........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................GAGGTGGGTGTGTGCTCTGTG..................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
....................................AAGGTCAAAAGAAGGTTAGT----AC...........................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................CAATTTCAGCACCGATTG------CACC------GACAGC........................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.....................................................................................GTGGGTGTGTGCTCTGTGCC................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.............................................................................ACTTCGAGGTGGGTGTGTGCTCTGTG..................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
............TCAAGTGCCAGTGGAAGACTTACGAA...................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................GACGAACTTCGAGGTGGGTGTGTGCTCT.....................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................AACTTCGAGGTGGGTGTGTGCTCTGC...................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
..............................................................................................................................................................................AGTCGACGGCGAGCCTCCAG.......................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TCAGCACCGATTG------CACC------GAC...........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACATACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACTTCGAGGTGGGTGTGTG-------CCGG---G--ATTAATCTCG-AAATT---GAA-A--GAAAACTGAAAGG-------------------AAAAGTTTGCGGCGAGCCTCCAGTCATCGAATTC-CCCAC--T---------------------------------TGAAATTATCAGTTCCAAACACTC-------------------GA-CT---AACTC---TCCCGTACTA-------TTTTATC--------CCT-CGA-CCCGTAGTTCTACGCCAATTTTAGCACCGACTG------CACC------GAAGACA------GCAACAACATGAG----SizeHit CountTotal NormTotal
No Reads
droBia1
TCCCAAAGCTCTTCAAGTGCCAGTGGAAGACGTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACCTCGAGGTGGGT-------------CGG---G--CAAAATCGAG-AAAAT---AGG-G--GATAACTAAGAGG-------------------AAAAGTTGACGGCGAGCCTCCCGTCACCGAGACA-CCCAC--C---------------------------------TGAACCTATCAGTTCCCAACACTC-------------------GA-CT---TATAG---ACA------C----------------------CC--CTG-TTCCCAGTTCTACGCCAATTTCAGTACCGAGTG------CACC------GACAGCAACA---CCAGCGACACC----ATSizeHit CountTotal NormTotal
No Reads
droTak1
TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATCAGCAGCAGACGAACTACGAGGTGGGTGTGTT-------TTAGAGCA--ATCTCCTCCG-AATTAAAGGAG-G--AAAATC--AAAGG-------------------AAAAGTGGGTGACGAGCCTCCATTCA-------------C--T---------------------------------TGAAATTATCAGTTCCAAACATTC-------------------GA-CTTATAG-AG---ACCCCT---A------TTTCGTAT--------CGC-CTA-TCCCCAGTTCTACGCCAATTTCAGTACCGATTG------CAGC------GACAGCAACAACAGCAATAGCAAC----ATSizeHit CountTotal NormTotal
No Reads
droEle1
TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACATACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAGCTTCGAGGTGGGTGTGTG-------CCGG--TA--ATTTCTCCTG-AAATT---TGGCC--AATTACTAAACGG-------------------AAAAGTTAACGGCGAGCCTCCAGTCA-------------C--T---------------------------------CGAAATTACCAGTTTCAAACACTC-------------------GA-CT---TACTT---TCCACT---A------TTTTACAC--------CCC-CGACTTTGCAGTTCTACGCCAATTTCAGCACCGATTG---TAACACC------GACAACA------ACAGCAACATGAG----SizeHit CountTotal NormTotal
No Reads
droRho1
TCCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGAACTTCGAGGTGGGTGTGTG-------CCGG--TA--ATTTCTCTCG-AAATT---AGG-C--AAAAATGAAAAGG-------------------AAAAGTTAACGGCGAGCCTCCATTCATCGAATCTCCCCAC--T---------------------------------TAAAATTATCAGTTCCAAACACTC-------------------AA-CT---AACTT--------TACTACT-------TTATC--------CCT-CGACCTCGCAGTTCTACGCCAATTTCAGCACCGACTG------TATC------GACAACA------ACAGCAACATGAG----SizeHit CountTotal NormTotal
No Reads
droFic1
TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACCTACGAAGGTCAAAAGAAGGTTAGT----ACATC---AGCAGACGGACTTCGAGGTGGGTGTGTG-------CCGG--CG--ATCTCTCCGG-AAATT---CAG-G--AAAACCTGAAAGA-------------------AAAAGTGACCGGCAAGCCTCCTGTCACCAAATTA-CCC-C--T---------------------------------TGAGCTTACCGGCTCGGAACTCTCCACCA-GTCA---CT-GATAAACT---AACC---------AAT-------------------------CC-CGA-TCCGCAGTTCTACGCCAATTTCAGCACCGATTG------CATC------GACACC---------AACAACATGAG----SizeHit CountTotal NormTotal
No Reads
droKik1
TCCCAAAGCTCTTCAAGTGCCAGTGGAAGACGTACGAAGGTCAGAAGAAGGTTAGT----ACATCATCAGCAGACGGACTTCGAGGTGGGTGTGTG-------CCGGGCCGTGCCTGG-CC-GGGATTT---CAG-GGGACTTTCT--GGCC-------------------CAAAGTTGGCTGCGAGTCTCCAGTCATT------------------------------------------------CGTAGCC---------CAACAGTT----------CCAGACCCAAA-CT---CACT---------TTCATCCGT-------ATCTT------CT------CCGGCAGTTCTTTGCCAATTTCAGCACCGAAAACATCATCACC------GCCAGCA------ACAGCAACAAC----ATSizeHit CountTotal NormTotal
No Reads
droAna3
TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTATGAAGGTCAGAAGAAGGTTAGT----ACA------GCAGA----CTTCGAGGTGGGTGTGTG-------CCGG---A--ATCTCTAACA-A--------------AAAATT---ATTA-------------------AAAAGTTGACTAGGATTTATCTATCAAA---TTA--------T---------------------------------AAAAATTATTTGTTTTACTCACTTGACCTGGCTA---CC----AA-CT---AACTCGTC-----AACCTCTTCAC-----CTTTA-------T------CCGGCAGTTTTACGCCAATTTCAGTACCGACTG------CAAC------GAGAGC------------AACATGAGCG--SizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
......................................................................................................................................................................................................................................................................................................................................................................................GACTG------CAAC------GAGAGC------------AACATGAGC...2414.004020011
.................................................................................................................................................................................................................................................................................................................................................................................GTACCGACTG------CAAC------GAGAGC------------............2014.004000013
........................................................................GA----CTTCGAGGTGGGTGTG...........................................................................................................................................................................................................................................................................................................................................1813.003000003
.....................................................................................................................................................................................................................................................................................................................................................................ACGCCAATTTCAGTACCGACT...............................................2112.002020000
.................................................................................................................................................................................................................................................................................................................................................................................................CAAC------GAGAGC------------AACATGAGC...1912.002010010
...................................................................................................................................................................................................................................................................................................................................................................TTACGCCAATTTCAGTACCGACTG------C.......................................2512.002110000
.........................................................................................................................................................................................................................................................................TCACTTGACCTGGCTA---CC----AA-CT---...............................................................................................................................2212.002200000
................................................................................................................................................................................................................................................................................................................................................................................AGTACCGACTG------CAAC------GAGAGC------------AAC.........2412.002000020
.................................................................................................................................................................................................................................................................................................................................................................................GTACCGACTG------CAAC------GAGAGC------------AACA........2412.002100010
..................................................................................................................................................................................................................................................................................................................................................................................................AAC------GAGAGC------------AACATGAGC...1812.002011000
.....................................................................................................................................................................................................................................................................................................................................................................ACGCCAATTTCAGTACCGACTG------C.......................................2311.001010000
..............................................................................................................................................................................................................................................................................................................................................................................TCAGTACCGACTG------CAAC------GAGAGC------------AAC.........2611.001001000
...........................................................................................................................................................................................................................................................................................................................................................................ATTTCAGTACCGACTG------CAAC------GAGA..........................2411.001010000
....................................................................................................................................................................................................................................................................................................................................................................TACGCCAATTTCAGTACCGACTG------CAA.....................................2611.001010000
........................................................................GA----CTTCGAGGTGGGTGTGTG-------CCG...............................................................................................................................................................................................................................................................................................................................2311.001000010
......................................................GT----ACA------GCAGA----CTTCGAGGTGGG...............................................................................................................................................................................................................................................................................................................................................2211.001000001
.................................................GGTTAGT----ACA------GCAGA----CTTCGA.....................................................................................................................................................................................................................................................................................................................................................2111.001010000
.............................................................................................................................................................................................................................................................................................................................................................................TTCAGTACCGACTG------CAAC------GAGA..........................2211.001010000
.............................................................................................................................................................................................................................................................................................................................................................................TTCAGTACCGACTG------CAAC------GAGAGC------------AACA........2811.001100000
.................................................................................................................................................................................................................................................................................................................................................................................GTACCGACTG------CAAC------GAGAGC------------AAC.........2311.001000010
......................................................................CAGA----CTTCGAGGTGGGTGTGTG-------..................................................................................................................................................................................................................................................................................................................................2211.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................CAAC------GAGAGC------------AACATGAGCG--2011.001000010
.....................................................................................................................................................................................................................................................................................................................................................................ACGCCAATTTCAGTACCGACTG------CAAC------..............................2611.001100000
.........TTTTCAAGTGCCAGTGGAAGACT.........................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..................................................................................................................................................................................................................................................................................................................................................................................TACCGACTG------CAAC------GAGAGC------------............1911.001000010
................................................................................................................................................................................................................................................................................................................................................................................AGTACCGACTG------CAAC------GAGAGC------------............2111.001010000
................................................AGGTTAGT----ACA------GCAGA----CTTCG......................................................................................................................................................................................................................................................................................................................................................2111.001000001
................................................................................................................................................................................................................................................................................................................................................................................AGTACCGACTG------CAAC------GAGAGC------------AACATG......2711.001000001
.........................................................................A----CTTCGAGGTGGGTGTGTG-------..................................................................................................................................................................................................................................................................................................................................1911.001000001
......................................................................CAGA----CTTCGAGGTGGGTGTG...........................................................................................................................................................................................................................................................................................................................................2011.001000010
.............................................................................................................................................................................................................................................................................................C----AA-CT---AACTCGTC-----AACCTCTT..........................................................................................................2111.001100000
...............................................................................................................................................................................................................................................................................................................................................................AGTTTTACGCCAATTTCAGTACCGA.................................................2511.001010000
..................................................................................................................................................................................................................................................................................................................................................................TTTACGCCAATTTCAGTACCGACT...............................................2411.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................AC------GAGAGC------------AACATGAGCG--1811.001100000
......................................................................................................................................................................................................................................................................................................................................................................CGCCAATTTCAGTACCGACTG------CAA.....................................2411.001010000
................................................................................................................................................................................................................................................................................................................................................................................AGTACCGACTG------CAAC------GAGAGC------------AACA........2511.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................ACTG------CAAC------GAGAGC------------AACATGAGC...2311.001000010
.................................ATGAAGGTCAGAAGAAGGTTAGT----AC...........................................................................................................................................................................................................................................................................................................................................................................2511.001010000
..................................................................................................................................................................................................................................................................................................................................................................................TACCGACTG------CAAC------GAGAGC------------AACATG......2511.001000001
.............................................................................................................................................................................................................................................................................................................................................................................TTCAGTACCGACTG------CAAC------GAGAGC------------............2411.001000001
...............................................................................................................................................................................................................................................................................................................................................................................CAGTACCGACTG------CAAC------GAGAGC------------............2211.001010000
...................................................................................................................................................................................................................................................................................................................................................................................ACCGACTG------CAAC------GAGAGC------------AACATG......2411.001010000
..............................................................................................................................................................................................................................................................................................................................................................................TCAGTACCGACTG------CAAC------GAGAGC------------............2311.001100000
............................................................................................................................................................................................................................................................................CTTGACCTGGCTA---CC----AA-CT---AACTCG.........................................................................................................................2511.001100000
...................................................................................................................................................................................................................................................................................................................................................................................ACCGACTG------CAAC------GAGAGC------------AACATGAGC...2711.001000010
.....................................................................GCAGA----CTTCGAGGTGGGT..............................................................................................................................................................................................................................................................................................................................................1811.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................G------CAAC------GAGAGC------------AACATGAGC...2011.001000010
.................................................GGTTAGT----ACA------GCAGA----CTTCG......................................................................................................................................................................................................................................................................................................................................................2011.001000001
.....................................................................................................................................................................................................................................................................TTACTCACTTGACCTGGCTA---CC----AA-....................................................................................................................................2411.001010000
droBip1
TTCCAAAGCTTTTCAAGTGCCAGTGGAAGACTTATGAAGGTCAGAAGAAGGTTAGT----A-------AGCAGA----CTTCGAGGTGGGTGTGTG-------CCGG---A--ATCTCTAACA-A---------------AAATT---ATT--------AATTAAATAAGAAAAAGTTGACGGGGAGTTTTCAATCATT-----C-CCCA--------------------------------------AAAATTATTAGTCTTACACACTTGACCTGGCAA---CC----GA-CT---AACTCGCC-----AACCTCTTTAC-----CTTTT-------T------CCGGCAGTTTTACGCCAATTTCAGCACCGACTG------CAAC------GAGAGC------------AA---C----ATSizeHit CountTotal NormTotal
No Reads
dp5
TCCCAAAGCTTTCAAAGCGCCCGTCG---------GAAGGTCAGAAGAAGGTTAGC----AAACT---T-----------------------------------------------CTTAGCG-AAATT---GT--------AAGTAAAAGA-------------------AAAAGTTGACGGCGAATTTCTAATCATTTCATTT-CTTTCA--------------ACA-CTGCCCGTAT-------CGAAATTACCG-TTTTCAACATCT-------------------AA-CT---AACT---------TACTCTTGC-------ATTCTTGCGGA-CC-CGG-CCTGAAGCTCTACGCAAACTTCAGCACAA---------------------------------ACAGCAAAATGAG----SizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
.................CGCCCGTCG---------GAAGGTCAGAAGAAGGT.....................................................................................................................................................................................................................................................................................................................................................................................2614.0040000000121
................GCGCCCGTCG---------GAAGGTCAGAA...........................................................................................................................................................................................................................................................................................................................................................................................2112.0020200000000
....................................................................................................................................................................................................................................................................TTTCAACATCT-------------------AA-CT---AACT---------TACTCT............................................................................................................2512.0020000000200
.......................................................................................................................................................................................................................................................................................................................................ATTCTTGCGGA-CC-CGG-CCTGAAG........................................................................2311.0010100000000
............................................................................................................................................................................AAAGTTGACGGCGAATTTCTAAT......................................................................................................................................................................................................................................2311.0010000000010
.............................................................................................................................................................................................................................................................................CT-------------------AA-CT---AACT---------TACTCTTGC-------AT................................................................................................2111.0010100000000
..........................................AGAAGAAGGTTAGC----AAACT---T-----------------------------------------------.....................................................................................................................................................................................................................................................................................................................2011.0010000100000
.......................................................................................................................................................................................................................................................................................................................................ATTCTTGCGGA-CC-CGG-CCTG...........................................................................2011.0010100000000
...................................................................................................................................................................................................................................................................................................................................................................CTACGCAAACTTCAGCACAA---------------------------------AC...............2211.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................AAACTTCAGCACAA---------------------------------ACAGC............1911.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................CTCTACGCAAACTTCAGCACAA---------------------------------AC...............2411.0010100000000
.............................................................................................................................................................................................................................................................................................................................TGC-------ATTCTTGCGGA-CC-CGG-CCT............................................................................2211.0010100000000
.............................................................................................................................................................................................................................................................................................................................TGC-------ATTCTTGCGGA-CC-CGG-CCTGAAGCC......................................................................2811.0010001000000
...............AGCGCCCGTCG---------GAAGGTCAG.............................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010000
..........................................................................................................................................................................................................................................................................................................................................CTTGCGGA-CC-CGG-CCTGAAGCTC.....................................................................2311.0010001000000
............................................................................................................................................................................................................T-CTTTCA--------------ACA-CTGCCCGTAT-------C.................................................................................................................................................................................2111.0010100000000
........................................................................................................................................................................................................................................................................................................................ACTCTTGC-------ATTCTTGCGGA-CC-...................................................................................2111.0010010000000
........................................................................................................................................................................................................................................................................................................................................................................CAAACTTCAGCACAA---------------------------------ACAGCA...........2111.0010000010000
..............................................................................................................................................................................................................................................................................................................................................................AAGCTCTACGCAAACTTCAG.......................................................2011.0010100000000
.................CGCCCGTCG---------GAAGGTCAGAAGAAGGA.....................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000100
...............AGCGCCCGTCG---------GAAGGTCAGAAGAAGGT.....................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000010
................GCGCCCGTCG---------GAAGGTCAGAAGAAGGT.....................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000010
........................CG---------GAAGGTCAGAAGAAGGTTAG..................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.........................................................................................................................................................................................................................................CCCGTAT-------CGAAATTACCG-T.....................................................................................................................................................................1911.0010000010000
...............................................................................................................................................................................................................................................................................................................................................................AGCTCTACGCAAACTTCAGC......................................................2011.0010100000000
..............................................................................................................................................................................................................................................................................................................................................CGGA-CC-CGG-CCTGAAGCTCTAC..................................................................2211.0010100000000
................GCGCCCGTCG---------GAAGGTCAG.............................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000000
.............................................................................................................................................................................................................................................................................................................................TGC-------ATTCTTGCGGA-CC-CGG-C..............................................................................2011.0010100000000
.........................G---------GAAGGTCAGAAGAAGGTTAGC----.............................................................................................................................................................................................................................................................................................................................................................................2211.0010010000000
..........................................................................................................................................................................................................................................................................................................................................CTTGCGGA-CC-CGG-CCTGAAGCTCC....................................................................2411.0010001000000
.................CGCCCGTCG---------GAAGGTCAGAAG..........................................................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................CCTGAAGCTCTACGCAAACT...........................................................2011.0010100000000
droPer2
TCCCAAAGCTTTCAAAGCGCCCGTCG---------GAAGGTCAGAAGAAGGTTAGC----AAACT---T-----------------------------------------------CTTAGCG-AAATT---GT--------AAGTAAAAGA-------------------AAAAGTTGACGGCGAATTTCTAATCATTTCATTT-CTTTCA--------------ACA-CTGCCCGTAT-------CGAAATTACCG-TTTTCAACATCT-------------------AA-CT---AACT---------TACTCTTGC-------ATTCTTGCGGA-CC-CGG-CCTGAAGCTCTACGCAAACTTCAGCACAGACA---------------------------------GCAAAATGAGCGCCSizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................GCACAGACA---------------------------------GCAAAATGAGCGCC2312.002000002
...........................................................................................................................................................................................................................................................................................................................CTTGC-------ATTCTTGCGGA-CC-CGG-CCTGG..........................................................................2612.002200000
......................................................................................................................................................................................................................................................................................................T---AACT---------TACTCTTGC-------ATTCTTG...........................................................................................2111.001010000
..............................................................................................................................................................................................................................................................................................................................................................................TCAGCACAGACA---------------------------------GCAAAA........1811.001000010
............................................AAGAAGGTTAGC----AAACT---T-----------------------------------------------.....................................................................................................................................................................................................................................................................................................................1811.001001000
..............................................................................................................................................................................................................................................................................................................................................CGGA-CC-CGG-CCTGAAGCTCTACGCAAAC............................................................2811.001010000
................................................................................................................................................................................................................................................................................................................................................................................AGCACAGACA---------------------------------GCAAAATGAGC...2111.001000001
.............................................................................................................................................................................................................................................................................................................................................................................TTCAGCACAGACA---------------------------------GCAAAAT.......2011.001001000
..........................................................................................................................................................................................................................................................................................................................................................................AACTTCAGCACAGACA---------------------------------GCA...........1911.001010000
...........................................................................................................................................................................................................................................................................................................................CTTGC-------ATTCTTGCGGA-CC-CGG-C..............................................................................2211.001010000
.............................................................................................................................................................................................................................................................................................................................................................................TTCAGCACAGACA---------------------------------GCAAAA........1911.001001000
.........................................CAGAAGAAGGTTAGC----AAACT---T-----------------------------------------------.....................................................................................................................................................................................................................................................................................................................2111.001001000
...........................................................................................................................................................................................................................................................ATTACCG-TTTTCAACATCT-------------------AA-CT---A..............................................................................................................................2411.001010000
.................................................................................................................................................................................................................................................................................................................................................................................GCACAGACA---------------------------------GCAAAATGAGCG..2111.001000001
..............AAGCGCCCGTCG---------GAAGGT................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...........................................................................................................................................................................................................................................................................................................................CTTGC-------ATTCTTGCGGA-CC-CGG-CCTGA..........................................................................2611.001100000
..........................................................................................................................................................................................................................................................................................................................................CTTGCGGA-CC-CGG-CCTGAAG........................................................................2011.001010000
...........................................................................................................................................................................................................................................................................................................................................TTGCGGA-CC-CGG-CCTGAAGCT......................................................................2111.001100000
...........................................................................................................................................................................................................................................................................................................................................TTGCGGA-CC-CGG-CCTGAAGCTCTAC..................................................................2511.001100000
.......................................................................................................................................................................................................................................................................................................................................ATTCTTGCGGA-CC-CGG-CCTGAAGCT......................................................................2511.001100000
.................CGCCCGTCG---------GAAGGTCAGA............................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
................................................................................................................................................GTAAAAGA-------------------AAAAGTTGACG...................................................................................................................................................................................................................................................1911.001100000
..................................................................................................................................................................................................................................................................................................................................................................................CACAGACA---------------------------------GCAAAATGAGC...1911.001001000
droWil2
TTCCAAAGCTTTTCAAGTGCCAATGGAAGACATATGAAGGTCAGAAGAAGGTTAGT----ACATC---AGTAGATTGCATTCGAGGTGGGTGTGTT-------T----------------GCG-AAA--------------------------------------------------TAGCGGCGATTTTTCTATCAAATCTATC-T--ATATCTGTGCACATATAACAATTGCT--TAT-------CAAAATTTCCAGTAATTGGAGTTT-------------------AA-CT---ATAT----T----TCCTTTCTT-------ATTTTTCC---GGC-CGG-CAAATAGTTTTACGCAGACTTCAGTACAGA------------------------CA------ACAGCAACATGAG----SizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
.............................................................CATC---AGTAGATTGCATTCGA.....................................................................................................................................................................................................................................................................................................................................................2015.00500050
..............................................................ATC---AGTAGATTGCATTCGA.....................................................................................................................................................................................................................................................................................................................................................1914.00400040
............................................................ACATC---AGTAGATTGCATTCGA.....................................................................................................................................................................................................................................................................................................................................................2114.00410030
...............................................................................................................................................................................................................................................................................................................................................................................CAGTACAGA------------------------CA------ACAGCAAC.........1913.00300030
..............................................................ATC---AGTAGATTGCATTCGAG....................................................................................................................................................................................................................................................................................................................................................2013.00303000
.........................................................................................................................................................................................................................................................................................................................................................................AGACTTCAGTACAGA------------------------CA------ACAGCAAC.........2513.00320010
....................................................................................................................................................................................................................................................................................................................................................................TACGCAGACTTCAGTACAGA------------------------C........................2112.00220000
.......................................................................AGATTGCATTCGAGGTGGGTGTG...........................................................................................................................................................................................................................................................................................................................................2312.00201001
................................................................C---AGTAGATTGCATTCGAGT...................................................................................................................................................................................................................................................................................................................................................1912.00200020
......................................................................................................................................................................................................................................................................................................................................................................CGCAGACTTCAGTACAGA------------------------CA------ACAGCA...........2612.00220000
.............................................................................................GTT-------T----------------GCG-AAA--------------------------------------------------TAGCGGCG................................................................................................................................................................................................................................................1812.00220000
.............................................................CATC---AGTAGATTGCATTCGAG....................................................................................................................................................................................................................................................................................................................................................2112.00202000
...................................................................................................................................................................................................................................................................................................................................................................TTACGCAGACTTCAGTACAGA------------------------C........................2212.00210010
..................................................................................................................................................................................................................................................................................................................................................................TTTACGCAGACTTCAGTACAGA------------------------C........................2312.00210010
....................................................................AGTAGATTGCATTCGAGGTGGGTGTG...........................................................................................................................................................................................................................................................................................................................................2611.00100001
.................................................................................................................................................................................................................................................................................................................................................................................GTACAGA------------------------CA------ACAGCAACA........1811.00100010
..............................................................................................................................................................................................................................................................................................................................................................................TCAGTACAGA------------------------CA------ACAGCAAC.........2011.00100001
..........................................................................................................................................................................................................................................................................................................................................................................GACTTCAGTACAGA------------------------CA------ACAGC............2111.00100010
................................................................................................................................................................................................................................................................................................................................................................GTTTTACGCAGACTTCAGTAC....................................................2111.00100010
............................................................................................................................................................................................................................................................................................................................................................................CTTCAGTACAGA------------------------CA------ACAGCAACAT.......2411.00100010
............................................................................................................................................................................................................................................................................................................................................................................CTTCAGTACAGA------------------------CA------ACAGCAAC.........2211.00110000
....................................................................................................................................................................................................................................................................................................................................................................TACGCAGACTTCAGTACAGA------------------------CA------AC...............2411.00101000
..........................................................................................................................................................................................................ATC-T--ATATCTGTGCACATATAAC.....................................................................................................................................................................................................2311.00100010
..................................................................................................................................................................................................................................................................................................................................................................TTTACGCAGACTTCAGTAC....................................................1911.00110000
.....................................................................................GTGGGTGTGTT-------T----------------GCG-AAA--------------------------------------------------TAGC....................................................................................................................................................................................................................................................2211.00100001
...................................................................................AGGTGGGTGTGTT-------T----------------GCG-AAA--------------------------------------------------TAGCG...................................................................................................................................................................................................................................................2511.00100001
...................................................................................................................................................................................................................................................................................................................................................................TTACGCAGACTTCAGTACAGA------------------------CA------ACAGC............2811.00100010
...................................................................................................................................................................................................................................................................................................................................................................TTACGCAGACTTCAGTACA...................................................1911.00100010
......................................................................................TGGGTGTGTT-------T----------------GCG-AAA--------------------------------------------------TAGC....................................................................................................................................................................................................................................................2111.00101000
..................................................................................................................................................................................................................................................................................................................................................................TTTACGCAGACTTCAGTACAGA------------------------.........................2211.00101000
...................................................................................................................................................................................................................................................................................................................................................................TTACGCAGACTTCAGTACAGA------------------------CA------ACA..............2611.00100010
....................................................................AGTAGATTGCATTCGAGGTGGGTG.............................................................................................................................................................................................................................................................................................................................................2411.00100001
..................................................................................................................................................................................................................................................................................................................................................................TTTACGCAGACTTCAGTACAGA------------------------CA------ACA..............2711.00101000
.............................................................................................................................................................................................................................................................................................................................................................................TTCAGTACAGA------------------------CA------ACAGCAACAT.......2311.00100010
..................................................................................................................................................................................................................................................................................................................................................................................TACAGA------------------------CA------ACAGCAACATGAG----2111.00100010
......................................................................................................................................................................................................................................................................................................................................................................CGCAGACTTCAGTACAGA------------------------CA------ACAGC............2511.00100010
..............................................................ATC---AGTAGATTGCATTCG......................................................................................................................................................................................................................................................................................................................................................1811.00100010
............................................................................GCATTCGAGGTGGGTGTG...........................................................................................................................................................................................................................................................................................................................................1811.00100010
.............................................................CATC---AGTAGATTGCATTCGAGT...................................................................................................................................................................................................................................................................................................................................................2211.00100010
................................................................................TCGAGGTGGGTGTGTT-------T----------------GCG-A............................................................................................................................................................................................................................................................................................................2111.00100100
...............................................................................TTCGAGGTGGGTGTGTT-------T----------------GCG-AAA--------------------------------------------------TAGC....................................................................................................................................................................................................................................................2811.00100100
......................................................................................................................................................................................................................................................................................................................................................................CGCAGACTTCAGTACAGA------------------------.........................1811.00100010
......................................................................................................................................................................................................................................................................................................................................................................CGCAGACTTCAGTACAGA------------------------CA------ACAGCAAC.........2811.00110000
..........................................................................TTGCATTCGAGGTGGGTG.............................................................................................................................................................................................................................................................................................................................................1811.00110000
....................................................................................................................................................................................................................................................................................................................................................................TACGCAGACTTCAGTACAGA------------------------CA------ACA..............2511.00110000
.........................................................................ATTGCATTCGAGGTGGGTGTG...........................................................................................................................................................................................................................................................................................................................................2111.00100010
.........................................................................ATTGCATTCGAGGTGGGTGTGT..........................................................................................................................................................................................................................................................................................................................................2211.00101000
..........................................................................................................................................................................................................................................................................................................................................................................GACTTCAGTACAGA------------------------CA------ACAG.............2011.00100010
.............................................................................................................................................................................................................................................................................................................................................................................TTCAGTACAGA------------------------CA------ACAGCAAC.........2111.00100010
.................................................................................CGAGGTGGGTGTGTT-------T----------------GCG-AAA--------------------------------------------------TAGC....................................................................................................................................................................................................................................................2611.00100010
droVir3
TTCCTAAGCTTTTCAAGTGCCAATGGAAGACGTATGAAGGTCAGAAGAAGGTTAGT----ACATC---GTTTCATTACGTTCGAGGTGGGTGTGTT-------TAGG-CCA--------------------------------AGTAAAACCAAAATTAAAGCAAATAAATCATTTTTTACGGCGATTTATCAATCAAA--ATTT-TGCAT--T-----------------TAGT--TAA-------CAAAATTATCAATTTGTAGCAGCT-------------------AA-AT---TAATG---TTTGG----------------TTTTTTCCACA-CTCCGG-CGTGCAGCTTTACGCGAATTTCAGTGCAGACTC------CGTT---------------------AAGAACATGGC----SizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................GCAGACTC------CGTT---------------------AAGAAC.........1814.004010000000000020000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................CAGTGCAGACTC------CGTT---------------------AAGAACATGGC----2713.003001000000000000001000100000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................CAGACTC------CGTT---------------------AAGAACATGGC----2213.003001000000000000000000000000000000000000000000000000000000000020
...............................................................................................................................................................................................................................................................................................................................................................................CAGTGCAGACTC------CGTT---------------------AAGA...........2012.002000000000000000100000000000000000000000000000000000000000000010
............................................................................ACGTTCGAGGTGGGTGTG...........................................................................................................................................................................................................................................................................................................................................1812.002000000000010000000000000000000000000001000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................GCAGACTC------CGTT---------------------AAGAACAT.......2012.002000000000001001000000000000000000000000000000000000000000000000
....................................................................GTTTCATTACGTTCGAGGTGGGTG.............................................................................................................................................................................................................................................................................................................................................2412.002020000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................ACGCGAATTTCAGTGCAGACTC------CGTT---------------------...............2612.002000000000000000000000000000000000000000000000000000000000000002
.............................................................................................................................................................................................................................................................................................................................................................................TTCAGTGCAGACTC------CGTT---------------------A..............1912.002000000000000000002000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................GTGCAGACTC------CGTT---------------------AAGAACAT.......2212.002000000000000010001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................ACGCGAATTTCAGTGCAGACTC------CGT.....................................2512.002000000000000000000000000000000000000000000000000000000000000002
............................................................................................................................................................................................................................................................................................................................................TCCACA-CTCCGG-CGTGCAG........................................................................1912.002000000000000000001000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................CGCGAATTTCAGTGCAGACTC------CGT.....................................2412.002000000000000000001010000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................CAGTGCAGACTC------CGTT---------------------AAGAA..........2112.002000000000000000011000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TTTCAGTGCAGACTC------CGTT---------------------AA.............2112.002000000000000000001100000000000000000000000000000000000000000000
..........................................................................TTACGTTCGAGGTGGGTG.............................................................................................................................................................................................................................................................................................................................................1812.002000001000000000000000001000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................GACTC------CGTT---------------------AAGAACATGG.....1911.001000000000000000000000000000000000000000000000000000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................TTCAGTGCAGACTC------CGTT---------------------AAGA...........2211.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................GCTTTACGCGAATTTCAGT......................................................1911.001000000000000000001000000000000000000000000000000000000000000000
...............................GTATGAAGGTCAGAAGAAGC......................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TTCAGTGCAGACTC------CGTT---------------------...............1811.001000000000000000000000000000000000000000000000000000000000000001
...........................................................................................................................................................................................................................................................................................................................................TTCCACA-CTCCGG-CGTGCA.........................................................................1911.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................GAATTTCAGTGCAGACTC------CGTT---------------------AAGAA..........2711.001000000000000000000000000000000000000000000000000000000000001000
.........................................................................................GTGTGTT-------TAGG-CCA--------------------------------AGTAAA....................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
..................................................................................................................................................................................................................................................................................................................................................................................TGCAGACTC------CGTT---------------------AAGAACATGG.....2311.001000000000000000000100000000000000000000000000000000000000000000
.........................................................................................................................................................................ATCATTTTTTACGGCGATTTAT..........................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................ATTACGTTCGAGGTGGGTGTGTT-------TA................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
......................................................................TTCATTACGTTCGAGGTGGGTGTG...........................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATTTCAGTGCAGACTC------CGTT---------------------AAGA...........2411.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................GCTTTACGCGAATTTCAGTGCAGA.................................................2411.001000100000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TTTCAGTGCAGACTC------CGTT---------------------...............1911.001000000000000000001000000000000000000000000000000000000000000000
............................................................................ACGTTCGAGGTGGGTGTGTT-------..................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000010000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................GCAGACTC------CGTT---------------------AAGAACA........1911.001010000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................AGTGCAGACTC------CGTT---------------------AAGAACATGGC----2611.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................GCTTTACGCGAATTTCAGTGCA...................................................2211.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................TACGTTCGAGGTGGGTGT............................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000100
................................................................................TCGAGGTGGGTGTGTT-------TAG...............................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000010000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................TTACGCGAATTTCAGTGCA...................................................1911.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................GCAGACTC------CGTT---------------------AAGAACATGGC----2311.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATTTCAGTGCAGACTC------CGT.....................................1911.001000000000000000000000000000000000000000000000000000000000001000
.....................AATGGAAGACGTATGAAGGT................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000100000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATTTCAGTGCAGACTC------CGTT---------------------AA.............2211.001000000000000000001000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................AATTTCAGTGCAGACTC------CGT.....................................2011.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................GTGGGTGTGTT-------TAGG-CCA--------------------------------AGTAAAACC.................................................................................................................................................................................................................................................................................2711.001000000000000010000000000000000000000000000000000000000000000000
.........................................................................ATTACGTTCGAGGTGGGTGTG...........................................................................................................................................................................................................................................................................................................................................2111.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................TGCAGACTC------CGTT---------------------AAGAACATG......2211.001000000000000000000000000000000000000000000000000000000000001000
...........................................................................................................................................................................................................................................................................................................................................................................ATTTCAGTGCAGACTC------CGTT---------------------...............2011.001000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................................................................................................................................................................................................GAATTTCAGTGCAGACTC------CGTT---------------------AA.............2411.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TTTCAGTGCAGACTC------CGTT---------------------C..............2011.001000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................................AAATAAATCATTTTTTACGGCGAT..............................................................................................................................................................................................................................................2411.001000000000000000000100000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................AGCTTTACGCGAATTTCAGTGCA...................................................2311.001000000000000000000000000010000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................AGTGCAGACTC------CGTT---------------------AAGA...........1911.001000000000000001000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................GAATTTCAGTGCAGACTC------CGT.....................................2111.001000000000000000000000100000000000000000000000000000000000000000
..........................................................................TTACGTTCGAGGTGGGTGTG...........................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000100
..................................................................................................................................................................................................................................................................................................................................................................TTTACGCGAATTTCAGTGCA...................................................2011.001000000000000001000000000000000000000000000000000000000000000000
.....................................................................TTTCATTACGTTCGAGGTGGGTGT............................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATTTCAGTGCAGACTC------CGTT---------------------A..............2111.001000000000000000000100000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................GT--TAA-------CAAAATTATCAATTTGTAGCAGCT-------------------.......................................................................................................................................2911.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TTCAGTGCAGACTC------CGTT---------------------AAGAAC.........2411.001000000000000000001000000000000000000000000000000000000000000000
............................................................ACATC---GTTTCATTACGTTCGAGGTGGG...............................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TTTCAGTGCAGACTC------CGTT---------------------AAGAA..........2411.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................AGCTTTACGCGAATTTCAGTG.....................................................2111.001000000000000000001000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................CTTTACGCGAATTTCAGTGCAGACT...............................................2511.001000000000000000000010000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................CAGACTC------CGTT---------------------AAGAACAT.......1911.001000000000000000000000000000000000000000000000000000000000001000
...............................................................TC---GTTTCATTACGTTCGAG....................................................................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000001000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................ACGCGAATTTCAGTGCAGACTC------CGTT---------------------A..............2711.001000000000000000001000000000000000000000000000000000000000000000
droMoj3
TTCCAAAGCTTTTCAAGTGCCAATGGAAGACATATGAAGGTCAGAAGAAGGTTAGTTAGTACATC---ATTTGATTACATTCGAGGTGGGTCTCTG-------TCGT-CCG--TTTAAATACG-AAT-------------AAAAGTAAAAGTG------------------AACTTTTCCCGGCGATTTATTAATCAAAATTT-T-AGCAT--T-----------------TACT--ACCTAACACTCAAAATTTCTCTTATCCAATATTT-------------------TA-AT---GTTTG---ATA------T------CTCTTACT--------TTC-CGG-CGTGCAGCTCTACGCGAACTTCTCCAAAGA---------CACC------GTC------------AGCAACATGAG----SizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
............................................................................ACATTCGAGGTGGGTCTCTG-------TC................................................................................................................................................................................................................................................................................................................................2212.002000002
........................................................................GATTACATTCGAGGTGGGT..............................................................................................................................................................................................................................................................................................................................................1912.002100001
..............................................................................ATTCGAGGTGGGTCTCTG-------..................................................................................................................................................................................................................................................................................................................................1812.002001100
..............................................................................ATTCGAGGTGGGTCTCTG-------TCGT-CCG--........................................................................................................................................................................................................................................................................................................................2511.001000100
.........................................................................ATTACATTCGAGGTGGGTCTCT..........................................................................................................................................................................................................................................................................................................................................2211.001100000
........................................................................GATTACATTCGAGGTGGGTCT............................................................................................................................................................................................................................................................................................................................................2111.001000100
.............................................................................................................................................................................................................................................................................................................................................................................TTCTCCAAAGA---------CACC------GTC------------AGC............2111.001000001
......................................................................TTGATTACATTCGAGGTGGGT..............................................................................................................................................................................................................................................................................................................................................2111.001000100
.........................................................................................................................................................................................................................................................................................................................................................................GAACTTCTCCAAAGA---------CACC------G.............................2011.001000001
.........................................................................................................................................................................................................................................................................................................................................T--------TTC-CGG-CGTGCAGCTCTACGC................................................................2211.001100000
..................................................................................................................................................................................................................................................................................................................ATA------T------CTCTTACT--------TTC-CGG-CGTGC..........................................................................2311.001000010
...........................................................................TACATTCGAGGTGGGTCTCTG-------T.................................................................................................................................................................................................................................................................................................................................2211.001100000
........................................................................GATTACATTCGAGGTGGGTCTC...........................................................................................................................................................................................................................................................................................................................................2211.001000010
............................................................................ACATTCGAGGTGGGTCTCTG-------..................................................................................................................................................................................................................................................................................................................................2011.001001000
..........................................................................TTACATTCGAGGTGGGTCTCTG-------TC................................................................................................................................................................................................................................................................................................................................2411.001000001
................................................................................................................................................................................................................................................................................................................................................................................TCCAAAGA---------CACC------GTC------------AGCA...........1911.001100000
.........................................................AGTACATC---ATTTGATTACATTCGAG....................................................................................................................................................................................................................................................................................................................................................2511.001100000
..................................................................................................................................................................................................................................................................................................................................................................................CAAAGA---------CACC------GTC------------AGCAACA........2011.001100000
..............................................................................ATTCGAGGTGGGTCTCTG-------T.................................................................................................................................................................................................................................................................................................................................1911.001010000
............................................................ACATC---ATTTGATTACATTCGAG....................................................................................................................................................................................................................................................................................................................................................2211.001100000
.........................................................................ATTACATTCGAGGTGGGTCTCTG-------T.................................................................................................................................................................................................................................................................................................................................2411.001001000
droGri2
TTCCAAAGCTTTTCAAGTGCCAATGGAAGACATATGAAGGTCAGAAGAAGGTTAGTTAGTACATC---ATTTGATTACGCTCGAGGTGGGTGCGTTTTTT-----------------TCAGC--AAA-------------TAAAGTAAAAGCA------------------AAAATCAAGCGACGATTCATCAATCAAAACCTTT-TGCAT--A-----------------TACT------------TAACAACATTATTAT--------------------------------T---AACTT---TAAT-A---T------ATTCTGTT--------TTG-CGG-TGTGCAGCTCTTTGCGAATTTCAACACAGACTC------A------------------------AACAACATGGC----SizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
........................................................................................................................................................................................................................................................................................................................................................................CGAATTTCAACACAGACTC------A------------------------AA.............2211.00110
..............................................................ATC---ATTTGATTACGCTCGAG....................................................................................................................................................................................................................................................................................................................................................2011.00101
........................................................................................................................................................................................................................................................................................................................................................................CGAATTTCAACACAGACTC------A------------------------...............2011.00110
............................................................................................................................................................................................................................................................................................................................................................................TTTCAACACAGACTC------A------------------------AACAACAT.......2411.00110
................................................................................................................................................................................................................................................................................................................................................................GCTCTTTGCGAATTTCAACAC....................................................2111.00101
...........................................................................................................................................................................................................................................................................................................................................................................ATTTCAACACAGACTC------A------------------------AACAAC.........2311.00110

Generated: 05/17/2015 at 11:06 PM