ID:

der_879

 Coordinate:

scaffold_4784:21644854-21644927 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.3 -14.3 -13.5

Flybase annnotation

exon [dere_GLEANR_16239:5]; CDS [Dere\GG16239-cds]; exon [dere_GLEANR_16239:4]; CDS [Dere\GG16239-cds]; intron [Dere\GG16239-in]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------##################################################
TGTCCCTGTACGATGCGATGTTTGCCCAGTACGGCGTCAAGATAGCCCAGGTGAGCCCTGAAGCACATCCAGCAGCTAATTAGAACACACAGATTTAAACGGGATGATGGCTGTTGGGGCTTAGGTGCTGGTGACCAAGCCGGACTTCTACAACGAGGAGACACGCAACAATCT
**************************************************.....((....(((((((((.......((((..........))))......))))).)).))...))********************************************************* 		Read size # Mismatch Hit Count Total Norm Total V108
head
 M055
female body
 V107
male body		 M057
embryo
 V040
embryo
 V060
head
....................................................................................................................................GACCAAGCCGGACTTCTACAACGAGGA............... 27 0 1 5.00 5 1 3 1 0 0 0
..................................................GTGAGCCCTGAAGCACATCCAGCAGCTA................................................................................................ 28 0 1 3.00 3 1 1 1 0 0 0
.......................................................................................................................................CAAGCCGGACTTCTACAACGAGGA............... 24 0 1 3.00 3 1 2 0 0 0 0
..............GCGATGTTTGCCCAGTACGGC........................................................................................................................................... 21 0 1 3.00 3 1 1 0 1 0 0
................GATGTTTGCCCAGTACGGCGTC........................................................................................................................................ 22 0 1 2.00 2 1 0 1 0 0 0
................GATGTTTGCCCAGTACGGCGT......................................................................................................................................... 21 0 1 2.00 2 0 0 2 0 0 0
......................................................................................................................................CCAAGCCGGACTTCTACAACGAGGA............... 25 0 1 2.00 2 2 0 0 0 0 0
.........ACGATGCGATGTTTGCCCAGTACGGC........................................................................................................................................... 26 0 1 2.00 2 0 1 0 1 0 0
...........GATGCGATGTTTGCCCAGTACGGCGT......................................................................................................................................... 26 0 1 2.00 2 1 0 1 0 0 0
............................GTACGGCGTCAAGATAGCCCAGGTGCTG...................................................................................................................... 28 3 1 2.00 2 2 0 0 0 0 0
...........GATGCGATGTTTGCCCAGTACG............................................................................................................................................. 22 0 1 2.00 2 1 1 0 0 0 0
..........CGATGCGATGTTTGCCCAGTACGGC........................................................................................................................................... 25 0 1 2.00 2 1 1 0 0 0 0
..................................................GTGAGCCCTGAAGCACATCCAGCAGCT................................................................................................. 27 0 1 2.00 2 2 0 0 0 0 0
........................................................................................................................CCAGGTGCTGGTGACCAAGCCGGA.............................. 24 2 1 1.00 1 1 0 0 0 0 0
..............................ACGGCGTCAAGATAGCCCAGGTGCTG...................................................................................................................... 26 3 1 1.00 1 0 0 0 1 0 0
....................................................................................................................................GACCAAGCCGGACTCCTACAACGAGGA............... 27 1 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................................................ACAACGAGGAGACACGCA....... 18 0 1 1.00 1 1 0 0 0 0 0
..................................................GTGAGCCCTGAAGCACATACAGCAGCT................................................................................................. 27 1 1 1.00 1 1 0 0 0 0 0
...............CGATGTTTGCCCAGTACGGC........................................................................................................................................... 20 0 1 1.00 1 0 0 0 1 0 0
.........................................................................................................................................AGCCGGACTTCTACAACGAGGA............... 22 0 1 1.00 1 1 0 0 0 0 0
................................................................................................AAACGGGATGATGGCTGTTTTGGCTT.................................................... 26 2 1 1.00 1 0 0 0 0 1 0
........................................................................................................................................AAGCCGGACTTCTACAACGAGGAG.............. 24 0 1 1.00 1 1 0 0 0 0 0
...............................CGGCGTCAAGATAGCCCAGGTGCTG...................................................................................................................... 25 3 1 1.00 1 0 0 1 0 0 0
.......GTACGATGCGATGTTTGCCCAGTACGG............................................................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0
................................GTCGTCAAGATAGCCCAGGTGCT....................................................................................................................... 23 3 1 1.00 1 0 0 0 1 0 0
..................................................................................................................................GTGACCAAGCCGGACTTCT......................... 19 0 1 1.00 1 0 0 0 0 1 0
....................................................................................................................................GACCAAGCCGGACTTCTACAACGAGG................ 26 0 1 1.00 1 1 0 0 0 0 0
.GTCCCTGTACGATGCGATGTTTGCCCA.................................................................................................................................................. 27 0 1 1.00 1 0 1 0 0 0 0
...................................................TGAGCCCTGAAGCACATCCAGCAGCTA................................................................................................ 27 0 1 1.00 1 0 1 0 0 0 0
........................................................................................................TGATGGCTGTTGGGGCTTAGT................................................. 21 1 1 1.00 1 0 1 0 0 0 0
................................................................................................AAACGGGATGATGGCTGTTGG......................................................... 21 0 1 1.00 1 0 1 0 0 0 0
.......................................................................................................ATGATGGCTGTTGGGGCTT.................................................... 19 0 1 1.00 1 1 0 0 0 0 0
...................GTTTGCCCAGTACGGCGTCAAGATA.................................................................................................................................. 25 0 1 1.00 1 0 0 1 0 0 0
.GTCCCTGTACGATGCGATGTTTGCC.................................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................GATTTAAACGGGATGATGGCTG............................................................. 22 0 1 1.00 1 0 0 1 0 0 0
...................................................................................................................................................CTACAACGAGGAGACACGCAA...... 21 0 1 1.00 1 0 0 1 0 0 0
..............GCGATGTTTGCCCAGTACGGCGT......................................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0
..........................................................................................................................................GCCGGACTTCTACAACGAGGAG.............. 22 0 1 1.00 1 1 0 0 0 0 0
...........................AGTACGGCGTCAAGATAGCCCAGGTGCT....................................................................................................................... 28 2 1 1.00 1 1 0 0 0 0 0
.......................................................................................................ATGATGGCTGTTGGGGCTTT................................................... 20 1 1 1.00 1 1 0 0 0 0 0
...............................................................CACATCCAGCAGCTAATTAGAA......................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................CCAGGTGCTGGTGACCAAGCCG................................ 22 2 1 1.00 1 1 0 0 0 0 0
................................................................................................................GTTGGGGCTTAGGTGCTGGTGACCAA.................................... 26 0 1 1.00 1 0 0 1 0 0 0
............................................................................................................................................CGGACTTCTACAACGAGGAG.............. 20 0 1 1.00 1 0 0 0 0 0 1
.....................................................................................................................................ATCAAGCCGGACTTCTACAACGAGGA............... 26 1 1 1.00 1 0 0 1 0 0 0
..............GCGATGTTTGCCCAGTACGGCGTC........................................................................................................................................ 24 0 1 1.00 1 0 0 1 0 0 0
........................CCCAGTACGGCGTCAAGATAGCC............................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................AGCCGGACTTCTACAACGAGGAG.............. 23 0 1 1.00 1 0 1 0 0 0 0
............ATGCGATGTTTGCCCAGTACGGCGT......................................................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
...........GATGCGATGTTTGCCCAGT................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0
....................................................................................................................................GACCAAGCCGTACTTCTACAACGAGGA............... 27 1 1 1.00 1 1 0 0 0 0 0
.................ATGTTTGCCCAGTACGGCGTC........................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................AACGGGATGATGGCTGTTGG......................................................... 20 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................GGTGACCAACCCGGACTTCT......................... 20 1 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................ACCAAGCCGGACTTCTACAACGAGGA............... 26 0 1 1.00 1 0 0 0 1 0 0
...............................................................................................................................CTGGTGACCAAGCCGGACTT........................... 20 0 1 1.00 1 0 1 0 0 0 0
......................TGCCCAGTACGGCGTCCAGATA.................................................................................................................................. 22 1 1 1.00 1 0 0 1 0 0 0
.......GTACGATGCGATGTTTGCCTA.................................................................................................................................................. 21 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................AACGGGATGATGGCTGTTGGG........................................................ 21 0 1 1.00 1 0 0 1 0 0 0
....................................................................................................................................GACCAAGCCGGACTTCTACAAC.................... 22 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................GAGGAGACACGCAACAATCT 20 0 1 1.00 1 0 0 1 0 0 0
............................................................................................................................................CGGACTTCTACAACGAGGAGACACGC........ 26 0 1 1.00 1 1 0 0 0 0 0
..................................................GTGAGCCCTGAAGCACATCCAGCA.................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0
................................................................................................................................................CTTCTACAACGAGGAGACACGC........ 22 0 1 1.00 1 0 0 0 1 0 0
............................GTACGGCGTCAAGATAGCCCAGGTGCT....................................................................................................................... 27 2 1 1.00 1 0 0 1 0 0 0
..................................................GTGAGCCCTGAAGCACATCC........................................................................................................ 20 0 1 1.00 1 0 0 0 1 0 0
....................................................................................................................................GACCAAGCCGGACTTCTACAACGA.................. 24 0 1 1.00 1 0 1 0 0 0 0
.........................CCAGTACGGCGTCCAGATA.................................................................................................................................. 19 1 1 1.00 1 0 0 0 0 0 1
...........GATGCGATGTTTGCCCAGTACGGC........................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0
.............TGCGATGTTTGCCCAGTACGGC........................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0
.......GTACGATGCGATGTTTGCCCA.................................................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0
.....................................................................................................................AGCCCAGGTGCTGGTGACCAAGCCGGA.............................. 27 3 1 1.00 1 0 1 0 0 0 0
...........................AGTACGGCGTCAAGATAAC................................................................................................................................ 19 1 1 1.00 1 1 0 0 0 0 0
....................................................................................................GGGATGATGGCTGTTGGG........................................................ 18 0 1 1.00 1 1 0 0 0 0 0
............................GTACGGCGTCAAGATAGCCCAGG........................................................................................................................... 23 0 1 1.00 1 0 0 1 0 0 0
.GTCCCTGTACGATGCGATGTTT....................................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0
.......................................................................................................ACGATGGCTGTTGGGGCTTAGT................................................. 22 2 1 1.00 1 0 0 1 0 0 0
....................................................................................................................................GACCAAGCCGGACTTCAACAACGAGG................ 26 1 1 1.00 1 1 0 0 0 0 0
.......TTACGATGCGATGTTTGCC.................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0
................................................................................................AAACGGGATGATGGCTGTTGGGGCTT.................................................... 26 0 1 1.00 1 0 0 1 0 0 0
.GTCCCTGTACGATGCGATGTTTGC..................................................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0 0
.........ACGATGCGATGTTTGCCCAGT................................................................................................................................................ 21 0 1 1.00 1 1 0 0 0 0 0
TGTCCCTCTACGACGCGATGTTT....................................................................................................................................................... 23 2 1 1.00 1 0 1 0 0 0 0
...................................................................................................................................................CTACAACGAGGTGACGCGCAACAAT.. 25 2 1 1.00 1 0 0 0 1 0 0
..TCCCTGTACGATGCGATGTT........................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0
................GATGTTTGCCTAGTACGGCGTC........................................................................................................................................ 22 1 1 1.00 1 1 0 0 0 0 0
................GATGTTTGCCCAGTACGGC........................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0
........................................................................................................................CCAGGTGCTGGTGACCAAGCCGGACTT........................... 27 2 1 1.00 1 0 0 0 1 0 0
...................GTTTGCCCAGTACGGCGTCAAG..................................................................................................................................... 22 0 1 1.00 1 0 0 1 0 0 0
...................................................TGAGCCCTGAAGCACATCCAGCA.................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0
......TTTACGATGCGATGTTTGCCCAGT................................................................................................................................................ 24 1 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................TTCTACAACGAGGAGACACGC........ 21 0 1 1.00 1 0 0 1 0 0 0
......................................................................................................GATCATGCCTGTTGGCGCTT.................................................... 20 3 3 0.67 2 0 2 0 0 0 0
...................................GTCAAGATAGCCCAGGTGCTG...................................................................................................................... 21 3 3 0.67 2 2 0 0 0 0 0
..................................CGTCAAGATAGCCCAGGTGCTG...................................................................................................................... 22 3 3 0.33 1 1 0 0 0 0 0
.....................................................AGCTCTGAAGGACATCCAGG..................................................................................................... 20 3 9 0.11 1 0 0 0 1 0 0
............................................................TAGCACATCCAACATCTAAT.............................................................................................. 20 3 13 0.08 1 0 0 0 0 1 0
......................................................................................................GATAATCACTGTTGGGGCT..................................................... 19 3 14 0.07 1 0 0 1 0 0 0

Anti-sense strand reads

ACAGGGACATGCTACGCTACAAACGGGTCATGCCGCAGTTCTATCGGGTCCACTCGGGACTTCGTGTAGGTCGTCGATTAATCTTGTGTGTCTAAATTTGCCCTACTACCGACAACCCCGAATCCACGACCACTGGTTCGGCCTGAAGATGTTGCTCCTCTGTGCGTTGTTAGA
*********************************************************.....((....(((((((((.......((((..........))))......))))).)).))...))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V040
embryo
 M055
female body
 V107
male body
.....................................................TCGGGAGTTCGTGTAGATCGC.................................................................................................... 21 3 4 0.25 1 1 0 0
.....................................................TCGGGACTTCGTGTAGCAAG..................................................................................................... 20 3 10 0.10 1 0 1 0
.........................................................................................................................TTTCACCACCACTGGTTCG.................................. 19 3 20 0.05 1 1 0 0
...............................GTTGCAGTTCAATCGGGTC............................................................................................................................ 19 3 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4784:21644804-21644977 + der_879 TGTCCCTGTACGATGCGATGTTTGCCCAGTACGGCGTCAAGATAGCCCAGGTGAGC----------------CCTGAAGCACATC-----------CAG--CAGCT--------------------AATTAGAACACACAGATTTAAACG-GG--ATG-------------------------A------TGGCT-----GTTGGGG-CTTAGGTGCTGGTGACCAAGCCGGACTTCTACAACGAGGAGACACGCAACAATCT
droYak3 3L:22297511-22297684 + dya_860 TGTCCCTATACGATGCGATGTTTGCCCAGTACGGCGTCAAAATAGCCCAAGTAAGC----------------CCTGAATCACATC-----------TAG--CAGCT--------------------AATTAGAACACACAGATTTAAACG-AG--ATG-------------------------A------TGGCT-----GTTTGGG-TTTAGGTGCTGGTGACCAAGCCGGACTTCTACAACGAGGAGACACGCAACAATCT
droSec2 scaffold_11:1895532-1895705 + TGTCCCTCTACGACGCGATGTTTGCCCAGTACGGAGTCAAGATAGCCCAGGTAAGC----------------CTAGGTGCACATC-----------CAG--CAGCT--------------------AATTAGAACACACAGATTTAAGCG-AG--ATG-------------------------A------TGGCT-----GTTTGGG-TGTAGGTGCTCGTGACCAAGCCGGACTTCTACAACGAGGAGACACGCAACAATCT
droSim2 3l:21485137-21485310 + TGTCCCTCTACGACGCGATGTTTGCCCAGTACGGAGTCAAGATAGCCCAGGTAAGC----------------CTAGGTGCACATC-----------CAG--CAGCT--------------------AATTAGAACACACAGATTTAAGCG-AG--ATG-------------------------A------TGGCT-----GTTTGGG-TGTAGGTGCTCGTGACCAAGCCGGACTTCTACAACGAGGAGACACGCAACAATCT
dm3 chr3L:21969944-21970117 + TGTCCCTCTACGACGCGATGTTTGCCCAGTACGGCGTCAAGATAGCCCAGGTAAGC----------------CCAGGAGAACATC-----------CAT--CAGCT--------------------AATTAGAACACACAGATTTAAGCG-AG--ATG-------------------------A------TGACT-----GTTCGGG-TGTAGGTGCTCGTGACCAAGCCGGACTTTTACAACGAGGAAACACGCAACAATCT
droEug1 scf7180000409472:805425-805600 + TGTCCCTCTACGATGCGATGTTTGCCCAGTACGGCGTCAAGATAGCCCAGGTGAGC----------------CCAGGAGCACATC-----------CAC--CCACT--------------------AATTAGAGCACACAGATTTGAGCG-AGCCGTG-------------------------A------TGGCT-----GTTTGGG-TTTAGGTGCTGGTGACCAAGCCGGACTTCTACAACGAGGAGACACGCAACAATCT
droBia1 scf7180000302377:1314225-1314399 - TGTCCCTCTACGACGCGATGTTTGCCCAGTACGGCGTGAAGATAGCACAGGTGAGC----------------CCCGGAGCACATC-----------CAG---CACT--------------------AATTAGAACACACAGATTTGAGTG-AGCCGTG-------------------------A------TGGCT-----GTTTGGG-TTTAGGTACTGGTGACCAAGCCGGACTTCTACAACGAGGAGACACGCAACAATCT
droTak1 scf7180000414002:117981-118156 + TGTCCCTCTACGACGCGATGTTTGCCCAGTATGGCGTCAAGATAGCGCAGGTGAGC----------------CCACGAGCACATC-----------CAC--CCACT--------------------AATTAGAACACACTGATTTGAGTG-AGCCGTG-------------------------A------TGGCT-----GTTTGGG-CTTAGGTGCTGGTGACCAAGCCGGACTTCTACAACGAGGAGACACGCAACAATCT
droEle1 scf7180000491199:864943-865115 - TGTCCCTGTACGACGCAATGTTTGCCCAGTACGGCGTCAAGATAGCTCAGGTGAGT------------------GGGACCACATC-----------CAG--CCACT--------------------AATTAG-ACACACAGATTTGAGTG-GGCCTTG-------------------------A------TGGCT-----GTTTGGG-CTTAGGTGCTGGTGACCAAGCCGGATTTCTACAACGAGGAGACACGCAACAATCT
droRho1 scf7180000759602:18857-19031 + TGTCCCTCTACGACGCGATGTTCGCCCAGTACGGCGTGAAGATAGCTCAGGTGAGT----------------CCGG-GCCACGGC-----------CAC--CCACT--------------------AATTAGAGCACACAGATTTGAGTG-AGCCGTG-------------------------A------TGGCT-----GTTCGGG-CTTAGGTGCTGGTGACCAAGCCGGACTTCTACAACGAGGAGACACGCAACAATCT
droFic1 scf7180000453945:126199-126363 + TGTCCCTCTACGACGCGATGTTCGCCCAGTACGGCGTCAAGATTGCCCAGGTGAGC----------------CCCGCAAAGC-TC-----------C-C--CCACT--------------------AATTGG---ACACTGATTTGAGTG-GG--CTT-------------------------G----------C-----GTTCGCG-TTTAGGTGCTGGTGACCAAGCCGGACTTCTACAACGAGGAGACACGCAACAACCT
droKik1 scf7180000302441:2093281-2093438 - TGTCTCTCTACGATGCGATGTTTGCCCAATATGGCGTCAAGATAGCCCAGGTTAGT----------------CCTGA------------------------CCCCT--------------------AATTAG-ACACACGGACTGGAGTG-AG--GCT-------------------------G------TTGCT-----C----CT-TGCAGGTGCTGGTGACCAAGCCGGACTTCTACAACGAGGAGACGCGCAACAATCT
droAna3 scaffold_13337:21103454-21103628 + TGTCGCTCTACGATGCAATGTTCGCCCAGTACGGCGTCAAGATAGCACAGGTGGGT----------------CAA------AATCTCAATCCTAGCCT--A-CCCT--------------------AATTGGGACACACAGATTTGAGCG-AA--GCG-------------------------T------TCG--------TT-GCGTTTCAGGTGCTGGTGACCAAGCCGGACTTCTACAACGAGGAGACACGCAACAATCT
droBip1 scf7180000396707:326734-326908 - TGTCGCTCTACGACGCCATGTTCGCCCAGTACGGCGTCAAGATAGCACAGGTGGGC----------------CAA------AATCCGAATCCTAACCT--A-CCCT--------------------AATTGGGACACACAGATTTGAGCG-AG--GTG-------------------------T------TGGCT-----G----CGTTTCAGGTTCTGGTGACAAAGCCGGACTTCTACAACGAGGAGACACGCAACAATCT
dp5 XR_group8:6042991-6043172 + TGTCCCTCTACGATGCAATGTTTGCCCAGTACGGCGTCAAGATTGCACAGGTACGT------------------GGCCACAGATC-CGAT--------C--CCCGT--------------------GATTAGGGTACTGGGATTACCGCG-AG--CTG-------------------------TTGTTTCTGGTTGTTTC---TGGT-TGCAGGTGCTGGTGACCAAGCCGGACTTCTACAACGAGGAGACGCGCAACAATCT
droPer2 scaffold_45:440984-441165 - TGTCCCTCTACGATGCAATGTTTGCCCAGTACGGCGTCAAGATTGCACAGGTACGT------------------GGCCACAGATC-CGAT--------C--CCCGT--------------------GATTAGGGTACTGGGATTACCGCG-AG--CTG-------------------------TTGTTTCTGGTTGTTTC---TGGT-TGCAGGTGCTGGTGACCAAGCCGGACTTCTACAACGAGGAGACGCGCAACAATCT
droWil2 scf2_1100000004762:1847289-1847493 - TGTCTCTCTATGATGCTATGTTTGCCCAATATGGCGTCAAGATTGCACAGGTTAGTAATAGGGACATAGGACGCATAACAACATG-----------CGTTA-GTCT--------------------AATTAAAACAGAGTGAGTTGTCTG-TACTTGG-ATTGTG-------------------TGTGTATGTATGTATA---T-AT-TTTAGGTGCTTGTTACCAAACCGGATTTCTACAATGAGGAAACACGCAACAATCT
droVir3 scaffold_13049:20936566-20936744 + TGTCACTCTACGATGCGATGTTTGCGCAATATGGTGTTAAGATTGCACAGGTCGGT----------------TACGAGC-----------------TA--G-CCCAAATTGAATGGCAGA------CA---------TGAAAAAACTGCA-AA--CT--------------------------TAAACTCTGATATAT--GA-TGCG-TTTAGGTGCTGGTGACCAAGCCGGATTTCTACAATGAGGAAACACGCAACAATCT
droMoj3 scaffold_6680:15289672-15289856 + TGTCACTCTACGATGCGATGTTTGCCCAGTACGGCGTCAAGATTGCACAGGTCGGTTAAGCGC---------ACTGTAGAGCGTT-----------CAT--C-ACT--------------------ACTGCT-----------------------ACTAACTGTGTGTGTGTGCGTGTGTGTGT------CTGCT-----ATATTGA-TTTAGGTGCTAGTTACCAAGCCGGACTTCTACAACGAGGAAACACGCAACAATCT
droGri2 scaffold_15110:22762967-22763151 - TGTCACTCTACGATGCGATGTTTGCGCAGTATGGCGTCAAGATTGCGCAGGTCGGT----------------TGCGGACAACACT-------------T--TATCA-----AATTACTTACCACGAAAGTGTAACACAGAGACTGAAACTGAA--ACTA------------------------A------TACA---------TGTA-TTTAGGTTCTGGTGACCAAGCCGGACTTCTACAACGAGGAGACACGCAACAATCT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
TGTCCCTGTACGATGCGATGTTTGCCCAGTACGGCGTCAAGATAGCCCAGGTGAGC----------------CCTGAAGCACATC-----------CAG--CAGCT--------------------AATTAGAACACACAGATTTAAACG-GG--ATG-------------------------A------TGGCT-----GTTGGGG-CTTAGGTGCTGGTGACCAAGCCGGACTTCTACAACGAGGAGACACGCAACAATCTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................................................GACCAAGCCGGACTTCTACAACGAGGA...............2715.0053000110
..................................................GTGAGC----------------CCTGAAGCACATC-----------CAG--CAGCT--------------------A........................................................................................................................................2813.0031000110
................................................................................................................................................................................................................................CAAGCCGGACTTCTACAACGAGGA...............2413.0032000010
..............GCGATGTTTGCCCAGTACGGC....................................................................................................................................................................................................................................2113.0031100010
................GATGTTTGCCCAGTACGGCGTC.................................................................................................................................................................................................................................2212.0020000110
................GATGTTTGCCCAGTACGGCGT..................................................................................................................................................................................................................................2112.0020000200
...............................................................................................................................................................................................................................CCAAGCCGGACTTCTACAACGAGGA...............2512.0020000020
.........ACGATGCGATGTTTGCCCAGTACGGC....................................................................................................................................................................................................................................2612.0021100000
...........GATGCGATGTTTGCCCAGTACGGCGT..................................................................................................................................................................................................................................2612.0020000110
............................GTACGGCGTCAAGATAGCCCAGGTGCTG----------------...............................................................................................................................................................................................2812.0020000020
...........GATGCGATGTTTGCCCAGTACG......................................................................................................................................................................................................................................2212.0021000010
..........CGATGCGATGTTTGCCCAGTACGGC....................................................................................................................................................................................................................................2512.0021000010
..................................................GTGAGC----------------CCTGAAGCACATC-----------CAG--CAGCT--------------------.........................................................................................................................................2712.0020000020
..............................ACGGCGTCAAGATAGCCCAGGTGCTG----------------...............................................................................................................................................................................................2611.0010100000
..............................................................................................................................................................................................................................................ACAACGAGGAGACACGCA.......1811.0010000010
...............CGATGTTTGCCCAGTACGGC....................................................................................................................................................................................................................................2011.0010100000
..................................................................................................................................................................................................................................AGCCGGACTTCTACAACGAGGA...............2211.0010000010
.................................................................................................................................................................................................................................AAGCCGGACTTCTACAACGAGGAG..............2411.0010000010
...............................CGGCGTCAAGATAGCCCAGGTGCTG----------------...............................................................................................................................................................................................2511.0010000100
.......GTACGATGCGATGTTTGCCCAGTACGG.....................................................................................................................................................................................................................................2711.0011000000
...........................................................................................................................................................................................................................GTGACCAAGCCGGACTTCT.........................1911.0010001000
.............................................................................................................................................................................................................................GACCAAGCCGGACTTCTACAACGAGG................2611.0010000010
.GTCCCTGTACGATGCGATGTTTGCCCA...........................................................................................................................................................................................................................................2711.0011000000
...................................................TGAGC----------------CCTGAAGCACATC-----------CAG--CAGCT--------------------A........................................................................................................................................2711.0011000000
............................................................................................................................................................TG-------------------------A------TGGCT-----GTTGGGG-CTTAGT.................................................2111.0011000000
.................................................................................................................................................AAACG-GG--ATG-------------------------A------TGGCT-----GTTGG..........................................................2111.0011000000
...........................................................................................................................................................ATG-------------------------A------TGGCT-----GTTGGGG-CTT....................................................1911.0010000010
...................GTTTGCCCAGTACGGCGTCAAGATA...........................................................................................................................................................................................................................2511.0010000100
.GTCCCTGTACGATGCGATGTTTGCC.............................................................................................................................................................................................................................................2511.0010000010
............................................................................................................................................GATTTAAACG-GG--ATG-------------------------A------TGGCT-----G..............................................................2211.0010000100
............................................................................................................................................................................................................................................CTACAACGAGGAGACACGCAA......2111.0010000100
..............GCGATGTTTGCCCAGTACGGCGT..................................................................................................................................................................................................................................2311.0010000100
...................................................................................................................................................................................................................................GCCGGACTTCTACAACGAGGAG..............2211.0010000010
...........................AGTACGGCGTCAAGATAGCCCAGGTGCT................................................................................................................................................................................................................2811.0010000010
...........................................................................................................................................................ATG-------------------------A------TGGCT-----GTTGGGG-CTTT...................................................2011.0010000010
...............................................................................CACATC-----------CAG--CAGCT--------------------AATTAGAA.................................................................................................................................2211.0010000010
........................................................................................................................................................................................................GTTGGGG-CTTAGGTGCTGGTGACCAA....................................2611.0010000100
.....................................................................................................................................................................................................................................CGGACTTCTACAACGAGGAG..............2011.0010010000
..............GCGATGTTTGCCCAGTACGGCGTC.................................................................................................................................................................................................................................2411.0010000100
........................CCCAGTACGGCGTCAAGATAGCC........................................................................................................................................................................................................................2311.0010000010
..................................................................................................................................................................................................................................AGCCGGACTTCTACAACGAGGAG..............2311.0011000000
............ATGCGATGTTTGCCCAGTACGGCGT..................................................................................................................................................................................................................................2511.0010000010
...........GATGCGATGTTTGCCCAGT.........................................................................................................................................................................................................................................1911.0010000010
.................ATGTTTGCCCAGTACGGCGTC.................................................................................................................................................................................................................................2111.0010000010
..................................................................................................................................................AACG-GG--ATG-------------------------A------TGGCT-----GTTGG..........................................................2011.0010000010
..............................................................................................................................................................................................................................ACCAAGCCGGACTTCTACAACGAGGA...............2611.0010100000
........................................................................................................................................................................................................................CTGGTGACCAAGCCGGACTT...........................2011.0011000000
..................................................................................................................................................AACG-GG--ATG-------------------------A------TGGCT-----GTTGGG.........................................................2111.0010000100
.............................................................................................................................................................................................................................GACCAAGCCGGACTTCTACAAC....................2211.0010000010
...................................................................................................................................................................................................................................................GAGGAGACACGCAACAATCT2011.0010000100
.....................................................................................................................................................................................................................................CGGACTTCTACAACGAGGAGACACGC........2611.0010000010
..................................................GTGAGC----------------CCTGAAGCACATC-----------CAG--CA................................................................................................................................................................2411.0011000000
.........................................................................................................................................................................................................................................CTTCTACAACGAGGAGACACGC........2211.0010100000
............................GTACGGCGTCAAGATAGCCCAGGTGCT................................................................................................................................................................................................................2711.0010000100
..................................................GTGAGC----------------CCTGAAGCACATC-----------C......................................................................................................................................................................2011.0010100000
.............................................................................................................................................................................................................................GACCAAGCCGGACTTCTACAACGA..................2411.0011000000
...........GATGCGATGTTTGCCCAGTACGGC....................................................................................................................................................................................................................................2411.0011000000
.............TGCGATGTTTGCCCAGTACGGC....................................................................................................................................................................................................................................2211.0011000000
.......GTACGATGCGATGTTTGCCCA...........................................................................................................................................................................................................................................2111.0010000100
.....................................................................................................................................................G-GG--ATG-------------------------A------TGGCT-----GTTGGG.........................................................1811.0010000010
............................GTACGGCGTCAAGATAGCCCAGG....................................................................................................................................................................................................................2311.0010000100
.GTCCCTGTACGATGCGATGTTT................................................................................................................................................................................................................................................2211.0011000000
.................................................................................................................................................AAACG-GG--ATG-------------------------A------TGGCT-----GTTGGGG-CTT....................................................2611.0010000100
.GTCCCTGTACGATGCGATGTTTGC..............................................................................................................................................................................................................................................2411.0011000000
.........ACGATGCGATGTTTGCCCAGT.........................................................................................................................................................................................................................................2111.0010000010
..TCCCTGTACGATGCGATGTT.................................................................................................................................................................................................................................................2011.0010000010
................GATGTTTGCCCAGTACGGC....................................................................................................................................................................................................................................1911.0010100000
...................GTTTGCCCAGTACGGCGTCAAG..............................................................................................................................................................................................................................2211.0010000100
...................................................TGAGC----------------CCTGAAGCACATC-----------CAG--CA................................................................................................................................................................2311.0011000000
..........................................................................................................................................................................................................................................TTCTACAACGAGGAGACACGC........2111.0010000100
...................................GTCAAGATAGCCCAGGTGCTG----------------...............................................................................................................................................................................................2130.6720000020
..................................CGTCAAGATAGCCCAGGTGCTG----------------...............................................................................................................................................................................................2230.3310000010
droYak3
TGTCCCTATACGATGCGATGTTTGCCCAGTACGGCGTCAAAATAGCCCAAGTAAGC----------------CCTGAATCACATC-----------TAG--CAGCT--------------------AATTAGAACACACAGATTTAAACG-AG--ATG-------------------------A------TGGCT-----GTTTGGG-TTTAGGTGCTGGTGACCAAGCCGGACTTCTACAACGAGGAGACACGCAACAATCTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
................GATGTTTGCCCAGTACGGCGT..................................................................................................................................................................................................................................2113.00300000030000
...........GATGCGATGTTTGCCCAGTACGGCGT..................................................................................................................................................................................................................................2612.00200000020000
..........................................................................................................................................CAGATTTAAACG-AG--ATG-------------------------A------T........................................................................1922.00400000130000
.............................................................................................................................................................................................................................GACCAAGCCGGACTTCTACAACGAGGA...............2721.50301000020000
..................................................GTAAGC----------------CCTGAATCACATC-----------TA.....................................................................................................................................................................2121.50302010000000
...........GATGCGATGTTTGCCCAGTACGGCGTC.................................................................................................................................................................................................................................2711.00100000010000
..............GCGATGTTTGCCCAGTACGGCGTCA................................................................................................................................................................................................................................2511.00100000010000
.............................................................................................................................................ATTTAAACG-AG--ATG-------------------------A------TGGCT-----GTTTGGG-T......................................................2821.00200000020000
.............................................................................................................................................................................................................................GACCAAGCCGGACTTCTAC.......................1921.00201010000000
............................................................................................................................................................................................................................................CTACAACGAGGAGACACGC........1921.00200000020000
.......ATACGATGCGATGTTTGCCCAGTACGGC....................................................................................................................................................................................................................................2811.00100100000000
..............GCGATGTTTGCCCAGTACGGC....................................................................................................................................................................................................................................2111.00100010000000
..........................CAGTACGGCGTCAAAATAGCCCAAGTG..................................................................................................................................................................................................................2711.00100000010000
..............................................................................................................................................................................................................................................ACAACGAGGAGACACGCAACA....2121.00200100010000
................GATGTTTGCCCAGTACGGCGTC.................................................................................................................................................................................................................................2211.00101000000000
..................................................GTAAGC----------------CCTGAATCACATC-----------TAG--CAGCT--------------------.........................................................................................................................................2711.00101000000000
.....................TTGCCCAGTACGGCGTCAAAAT............................................................................................................................................................................................................................2211.00101000000000
............................................................................................................................................................................................................................................CTACAACGAGGAGACACGCA.......2021.00200000110000
..........CGATGCGATGTTTGCCCAGTACGGCGC..................................................................................................................................................................................................................................2711.00100000010000
...................GTTTGCCCAGTACGGCGTCAAA..............................................................................................................................................................................................................................2211.00100000010000
.....................................................................................................................................................G-AG--ATG-------------------------A------TGGCT-----GTTTGGG-TTTAG..................................................2411.00110000000000
..............GCGATGTTTGCCCAGTACGGCGT..................................................................................................................................................................................................................................2311.00100000010000
..........................CAGTACGGCGTCAAAATAGCCCAAGT...................................................................................................................................................................................................................2611.00100000010000
..................................................GTAAGC----------------CCTGAATCACATC-----------TAG--CAGC..............................................................................................................................................................2611.00101000000000
............................GTACGGCGTCAAAATAGCCCAAGTGC.................................................................................................................................................................................................................2611.00101000000000
.....................................................................................................................................................................................................................................CGGACTTCTACAACGAGGAGA.............2121.00200000020000
.........................................................................................................................................ACAGATTTAAACG-AG--ATG-------------------------A------T........................................................................2021.00200000020000
...........................................................................................................................................................................................................................................TCTACAACGAGGAGACACG.........1921.00200000020000
..................................CGTCAAAATAGCCCAAGTGC.................................................................................................................................................................................................................2011.00100000010000
.........................................................................................................................................................................................................................................CTTCTACAACGAGGAGACACGCAA......2420.50101000000000
............................................................................................................................................................................................................................................CTACAACGAGGAGACACGCAAC.....2220.50100000010000
.............................................................................................................................................................................................................................GACCAAGCCGGACTTCTACAA.....................2120.50101000000000
..................................................................................................................................................................................................................................AGCCGGACTTCTACAACGAGGAGACACG.........2820.50110000000000
............................................................................................................................................GATTTAAACG-AG--ATG-------------------------A------TGGCT-----GTTTGGG-.......................................................2820.50100000010000
.......ATACGATGCGATGTTTGCCCAGT.........................................................................................................................................................................................................................................2320.50100000010000
.........................................................................................................................................................................................................................................CTTCTACAACGAGGAGACACG.........2120.50101000000000
.......ATACGATGCGATGTTTGCCCA...........................................................................................................................................................................................................................................2120.50101000000000
.................................................................................................................................................AAACG-AG--ATG-------------------------A------TGGCT-----GTTTGGG-TT.....................................................2520.50100000010000
.GTCCCTATACGATGCGATGT..................................................................................................................................................................................................................................................2020.50101000000000
..................................................GTAAGC----------------CCTGAATCACATC-----------TAG--C.................................................................................................................................................................2320.50101000000000
............................................................................................................................................................................................................................................CTACAACGAGGAGACACGCAACAATCT2720.50101000000000
..........................................................................................................................................................................................................................................TTCTACAACGAGGAGACACGC........2120.50100000010000
.............................................................................................................................................................................................................................GACCAAGCCGGACTTCTACAAC....................2220.50100100000000
....................................................................................................................................................CG-AG--ATG-------------------------A------TGGCT-----GTTTGGG-TTT....................................................2320.50101000000000
............................................................................................................................................................................................................................................CTACAACGAGGAGACACGCAACAATC.2620.50100000010000
..............................................................................................................................................TTTAAACG-AG--ATG-------------------------A------TGGCT-----GTTTGGG-TT.....................................................2820.50100000010000
.................................................................................................................................................................................................................................AAGCCGGACTTCTACAACGAGGA...............2320.50101000000000
......TATACGATGCGATGTTTGCCCA...........................................................................................................................................................................................................................................2220.50100100000000
.............TGCGATGTTTGCCCAGTACGG.....................................................................................................................................................................................................................................2120.50101000000000
.....CTATACGATGCGATGTTTGCCCAGTAC.......................................................................................................................................................................................................................................2720.50100000010000
...............................................................................................................................................................................................................................................CAACGAGGAGACACGCAACA....2020.50100000010000
...................................................................................................................................................................................................................................GCCGGACTTCTACAACGAGGAGACAC..........2620.50110000000000
..................................................................................................................................................AACG-AG--ATG-------------------------A------TGGCT-----GTTTGG.........................................................2120.50100100000000
.............................................................................................................................................ATTTAAACG-AG--ATG-------------------------A------TGGCT-----GTTTGGG-TT.....................................................2920.50100000010000
droSec2
TGTCCCTCTACGACGCGATGTTTGCCCAGTACGGAGTCAAGATAGCCCAGGTAAGC----------------CTAGGTGCACATC-----------CAG--CAGCT--------------------AATTAGAACACACAGATTTAAGCG-AG--ATG-------------------------A------TGGCT-----GTTTGGG-TGTAGGTGCTCGTGACCAAGCCGGACTTCTACAACGAGGAGACACGCAACAATCTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................GATGTTTGCCCAGTACGGAGT..................................................................................................................................................................................................................................2113.0030210
...............CGATGTTTGCCCAGTACGGAGTC.................................................................................................................................................................................................................................2313.0030300
...............CGATGTTTGCCCAGTACGGAGT..................................................................................................................................................................................................................................2212.0020110
...............CGATGTTTGCCCAGTACGGA....................................................................................................................................................................................................................................2012.0020200
...................GTTTGCCCAGTACGGAGT..................................................................................................................................................................................................................................1812.0020110
.....................................................................................................................................................................................................................................CGGACTTCTACAACGAGGAG..............2011.0011000
........TACGACGCGATGTTTGCCCAGTACGGA....................................................................................................................................................................................................................................2711.0010100
...........GACGCGATGTTTGCCCAGTACGG.....................................................................................................................................................................................................................................2311.0011000
..................................................................................................................................................................................................................................AGCCGGACTTCTACAACGAGGAG..............2311.0011000
...........GACGCGATGTTTGCCCAGTACGGAGTC.................................................................................................................................................................................................................................2711.0010100
...CCCTCTACGACGCGATGTTTGCC.............................................................................................................................................................................................................................................2311.0011000
.............CGCGATGTTTGCCCAGTACGGAG...................................................................................................................................................................................................................................2311.0010010
.....................................................................................................................................................................................................................GTGCTCGTGACCAAGCCGGACTTCT.........................2511.0010100
.......CTACGACGCGATGTTTGCCCAGTACGGA....................................................................................................................................................................................................................................2811.0010100
.............................................................................................................................................................G-------------------------A------TGGCT-----GTTTGGG-TGTAG..................................................1911.0010100
.......CTACGACGCGATGTTTGCCCAGTACGG.....................................................................................................................................................................................................................................2711.0010100
................GATGTTTGCCCAGTACGGAGTCAA...............................................................................................................................................................................................................................2411.0011000
.............................................................................................................................................................................................................................GACCAAGCCGGACTTCTACAACGAGGAG..............2811.0011000
.....................................................................................................................................................G-AG--ATG-------------------------A------TGGCT-----GTTTGGG-TGTAG..................................................2411.0010100
.................ATGTTTGCCCAGTACGGAGTC.................................................................................................................................................................................................................................2111.0010100
.............CGCGATGTTTGCCCAGTACGGA....................................................................................................................................................................................................................................2211.0010010
...................GTTTGCCCAGTACGGAGTCAA...............................................................................................................................................................................................................................2111.0010100
............ACGCGATGTTTGCCCAGTACGGAGT..................................................................................................................................................................................................................................2511.0010100
.................................................................................................................................................................................................................................AAGCCGGACTTCTACAACGAGGA...............2311.0010010
............................GTACGGAGTCAAGATAGCCCAGGT...................................................................................................................................................................................................................2411.0010100
............................................................................................................................................................................................................................................CTACAACGAGGAGACACGC........1911.0010010
...............................................................................................................................................................................................................................CCAAGCCGGACTTCTACAACGAGGA...............2511.0010100
.................ATGTTTGCCCAGTACGGAGT..................................................................................................................................................................................................................................2011.0010100
..........................CAGTACGGAGTCAAGATAGC.........................................................................................................................................................................................................................2011.0011000
......................................................................................................................................................................................................................................GGACTTCTACAACGAGGAGACAC..........2311.0010001
droSim2
TGTCCCTCTACGACGCGATGTTTGCCCAGTACGGAGTCAAGATAGCCCAGGTAAGC----------------CTAGGTGCACATC-----------CAG--CAGCT--------------------AATTAGAACACACAGATTTAAGCG-AG--ATG-------------------------A------TGGCT-----GTTTGGG-TGTAGGTGCTCGTGACCAAGCCGGACTTCTACAACGAGGAGACACGCAACAATCTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................CAAGCCGGACTTCTACAACGAGGA...............24112.001209210000000000000
.................................................................................................................................................................................................................................AAGCCGGACTTCTACAACGAGGA...............2316.00605100000000000000
.............................................................................................................................................................................................................................GACCAAGCCGGACTTCTACAACGAGGA...............2715.00504100000000000000
...............................................................................................................................................................................................................................CCAAGCCGGACTTCTACAACGA..................2213.00301200000000000000
.................................................................................................................................................................................................................................AAGCCGGACTTCTACAACGAGGAGACAC..........2812.00202000000000000000
.......................................................................................................................................................................................................................GCTCGTGACCAAGCCGGACTTCT.........................2312.00202000000000000000
.......................................................................................................................................................................................................................GCTCGTGACCAAGCCGGACTTCTAC.......................2512.00201100000000000000
.....................................................................................................................................................................................................................GTGCTCGTGACCAAGCCGGACTTCT.........................2512.00201010000000000000
....................................................................................................................................................................................................................................CCGGACTTCTACAACGAGGA...............2012.00202000000000000000
...........................................................................................................................................................................................................................GTGACCAAGCCGGACTTCT.........................1912.00202000000000000000
........................................................................................................................................................................................................................CTCGTGACCAAGCCGGACT............................1912.00211000000000000000
.............................................................................................................................................................................................................................GACCAAGCCGGACTTCTACAAC....................2212.00201100000000000000
.....................................................................................................................................................................................................................................CGGACTTCTACAACGAGGA...............1912.00202000000000000000
...................................................................................................................................................................................................................AGGTGCTCGTGACCAAGCCG................................2011.00100010000000000000
.............CGCGATGTTTGCCCAGTACGGAGTC.................................................................................................................................................................................................................................2511.00100100000000000000
.....................................................................................................................................................................................................................................CGGACTTCTACAACGAGG................1811.00100100000000000000
........................................................................................................................................................................................................................................ACTTCTACAACGAGGAGACACGCA.......2411.00100010000000000000
.......................GCCCAGTACGGAGTCAAGATAGCCCA......................................................................................................................................................................................................................2611.00100010000000000000
...............................................................................................................................................................................................................................CCAAGCCGGACTTCTACAACGAGGAGAC............2811.00101000000000000000
..............GCGATGTTTGCCCAGTACGGAGT..................................................................................................................................................................................................................................2311.00100010000000000000
.................................................................................................................................................................................................................................AAGCCGGACTTCTACAACGA..................2011.00101000000000000000
.................................................................................................................................................................................................................................AAGCCGGACTTCTACAACGAGGAGA.............2511.00101000000000000000
................GATGTTTGCCCAGTACGG.....................................................................................................................................................................................................................................1811.00100010000000000000
.....................TTGCCCAGTACGGAGTCAAGATAGCC........................................................................................................................................................................................................................2611.00101000000000000000
..................................................................................................................................................................................................................................AGCCGGACTTCTACAACGAGGA...............2211.00100000000000100000
.............................................................................................................................................................................................................................GACCAAGCCGGACTTCTACA......................2011.00100010000000000000
............................GTACGGAGTCAAGATAGCCCAGGT...................................................................................................................................................................................................................2411.00100010000000000000
.................ATGTTTGCCCAGTACGGAGTC.................................................................................................................................................................................................................................2111.00100100000000000000
.............................................................................................................................................................................................................................GACCAAGCCGGACTTCTAC.......................1911.00100100000000000000
........................................................................................................................................................G--ATG-------------------------A------TGGCT-----GTTTGGG-T......................................................1811.00100010000000000000
...................................................................................................................................................................................................................................GCCGGACTTCTACAACGAGG................2011.00100100000000000000
...........GACGCGATGTTTGCCCAGTACGGA....................................................................................................................................................................................................................................2411.00100010000000000000
................................................................................................................................................................................................................................CAAGCCGGACTTCTACAACGAGGAGACA...........2811.00101000000000000000
.....................................................................................................................................................................................................................GTGCTCGTGACCAAGCCGGACTTCTAC.......................2711.00101000000000000000
.........................................................................................................................................................................................................................TCGTGACCAAGCCGGACTTCTAC.......................2311.00100000000000100000
....................................................................................................................................................................................................................................CCGGACTTCTACAACGAGGAGACACGC........2711.00101000000000000000
................................................................................................................................................................................................................................CAAGCCGGACTTCTACAACGAGGG...............2411.00101000000000000000
................................................................................................................................................................................................................................CAAGCCGGACTTCTACAACGAGGAGA.............2611.00101000000000000000
.............CGCGATGTTTGCCCAGTACGG.....................................................................................................................................................................................................................................2111.00100010000000000000
................GATGTTTGCCCAGTACGGA....................................................................................................................................................................................................................................1911.00100010000000000000
................GATGTTTGCCCAGTACGGAGTCAAGAT............................................................................................................................................................................................................................2711.00100010000000000000
...................................................................................................................................................................................................................AGGTGCTCGTGACCAAGCCGGACT............................2411.00100000000000100000
..........................................................................................................................................................................................................................CGTGACCAAGCCGGACTTCTACAAC....................2511.00100010000000000000
.....................................................................................................................................................G-AG--ATG-------------------------A------TGGCT-----GTTTGGG-TGTAG..................................................2411.00101000000000000000
.............CGCGATGTTTGCCCAGTACGGA....................................................................................................................................................................................................................................2211.00100000000000100000
...........................................................................................................................................................................................................................GTGACCAAGCCGGACTTCTACAAC....................2411.00101000000000000000
....................................................................................................................................................................................................................................CCGGACTTCTACAACGAGGAGA.............2211.00101000000000000000
.GTCCCTCTACGACGCGAT....................................................................................................................................................................................................................................................1811.00100010000000000000
.......................................................................................................................................................................................................................GCTCGTGACCAAGCCGGACTT...........................2111.00101000000000000000
dm3
TGTCCCTCTACGACGCGATGTTTGCCCAGTACGGCGTCAAGATAGCCCAGGTAAGC----------------CCAGGAGAACATC-----------CAT--CAGCT--------------------AATTAGAACACACAGATTTAAGCG-AG--ATG-------------------------A------TGACT-----GTTCGGG-TGTAGGTGCTCGTGACCAAGCCGGACTTTTACAACGAGGAAACACGCAACAATCTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.............................................................................................................................................................................................................................GACCAAGCCGGACTTTTAC.......................1915.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000005000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................ATG-------------------------A------TGACT-----GTTCGGG-TGTAG..................................................2115.0050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000100000000000000000000101000000
................GATGTTTGCCCAGTACGGCGT..................................................................................................................................................................................................................................2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000100000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
................GATGTTTGCCCAGTACGGCGTC.................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010200000000
.......................................................................................................................................................AG--ATG-------------------------A------TGACT-----GTTCGGG-TGTAG..................................................2314.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
.......................................................................................................................................................................................A------TGACT-----GTTCGGG-TGTAG..................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000010000000000
...................................................................................................................................................GCG-AG--ATG-------------------------A------TGACT-----GTTCGGG-TGT....................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000
..............................ACGGCGTCAAGATAGCCCAGGTGCT................................................................................................................................................................................................................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................GCG-AG--ATG-------------------------A------TGACT-----GTTCGGG-TGTAG..................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000
.............................................................................................................................................................G-------------------------A------TGACT-----GTTCGGG-TGTAG..................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000100000000000
..............................................................................................................................................................................................................G-TGTAGGTGCTCGTGACCAAG...................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000
.............................TACGGCGTCAAGATAGCCCAGGTGCT................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
.....................................................................................................................................................G-AG--ATG-------------------------A------TGACT-----GTTCGGG-TGTAG..................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................GACTTTTACAACGAGGAAACAC..........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TACGACGCGATGTTTGCCCAGTAC.......................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TTTACAACGAGGAAACACGCAACAATCT2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GATGTTTGCCCAGTACGGC....................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................TTAAGCG-AG--ATG-------------------------A------TGACT-----GTTCGGG-TG.....................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...CCCTCTACGACGCGATGTT.................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CGACGCGATGTTTGCCCAGT.........................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
...CCCTCTACGACGCGATGTTTGC..............................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TTTTACAACGAGGAAACACG.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.....................................................................................................................................................G-AG--ATG-------------------------A------TGACT-----GTTCGGG-TGC....................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...........GACGCGATGTTTGCCCAGTACGGC....................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....CTCTACGACGCGATGTTTGCC.............................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
.........ACGACGCGATGTTTGCCCAGTACGGC....................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................GTTTGCCCAGTACGGCGTC.................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................ATGTTTGCCCAGTACGGCGTCA................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................AGGTGCTCGTGACCAAGCCGGACT............................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................GATGTTTGCCCAGTACGG.....................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........ACGACGCGATGTTTGCCCAGTAC.......................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..............GCGATGTTTGCCCAGTACGGC....................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................GACCAAGCCGGACTTTTACAACGA..................2411.0010000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GACGCGATGTTTGCCCAGTACGGCGT..................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
............................................................................................................................................................TG-------------------------A------TGACT-----GTTCGGG-TGTAG..................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000
...........................................................................................................................................................................................................................................TTTACAACGAGGAAACACG.........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................AAGCG-AG--ATG-------------------------A------TGACT-----GT.............................................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................TTAGAACACACAGATTTAAGCG-AG--............................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
................................................................................................................................................................................................................................CAAGCCGGACTTTTACAAC....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................G-------------------------A------TGACT-----GTTCGGG-TGTAGGTGC..............................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..................................................................................................................................................................................................................................AGCCGGACTTTTACAACGAGGAA..............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................GTGCTCGTGACCAAGCCGGACT............................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................GACCAAGCCGGACTTTTACAACGAGG................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................CCCAGTACGGCGTCAAGAT............................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
....................................................................................................................................................CG-AG--ATG-------------------------A------TGACT-----GTTCGGG-TGTAG..................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000
.......CTACGACGCGATGTTTGCCCAGT.........................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................CGTGACCAAGCCGGACTTTT.........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................ACAACGAGGAAACACGCAACAATC.2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........TACGACGCGATGTTTGCC.............................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................CAACGAGGAAACACGCAAC.....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................CCGGACTTTTACAACGAGGAA..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................CGTGACCAAGCCGGACTTTTACA......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................TGTTTGCCCAGTACGGCGTCAAGAT............................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
........TACGACGCGATGTTTGCCCA...........................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................TTTAAGCG-AG--ATG-------------------------A------TGACT-----GTTCGGG-.......................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
............ACGCGATGTTTGCCCAGT.........................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................TGCCCAGTACGGCGTCAAG..............................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................CGTGACCAAGCCGGACTTTTAC.......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................TTTGCCCAGTACGGCGTCAAGATAGC.........................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...................GTTTGCCCAGTACGGCGTCAAGAT............................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.GTCCCTCTACGACGCGAT....................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................G--ATG-------------------------A------TGACT-----GTTCGGG-T......................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
............................GTACGGCGTCAAGATAGCC........................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.............................................................................................................................................................................................................................................TACAACGAGGAAACACGCAACA....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
...........................................................................................................................................................ATG-------------------------A------TGACT-----GTTCGGG-TGTA...................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
................................................................................................................................................TAAGCG-AG--ATG-------------------------A------TGACT-----GTTCGGG-.......................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................AACGAGGAAACACGCAACA....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GACGCGATGTTTGCCCAGTACGGCGTC.................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CTACGACGCGATGTTTGCCCAGTACG......................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................GAGAACATC-----------CAT--CAGCT--------------------AA.......................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................GTGACCAAGCCGGACTTTTAC.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................GTACGGCGTCAAGATAGCCCAGGTGTT................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................GTCAAGATAGCCCAGGTGCT................................................................................................................................................................................................................2060.1710000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
TGTCCCTCTACGATGCGATGTTTGCCCAGTACGGCGTCAAGATAGCCCAGGTGAGC----------------CCAGGAGCACATC-----------CAC--CCACT--------------------AATTAGAGCACACAGATTTGAGCG-AGCCGTG-------------------------A------TGGCT-----GTTTGGG-TTTAGGTGCTGGTGACCAAGCCGGACTTCTACAACGAGGAGACACGCAACAATCTSizeHit CountTotal NormTotal
No Reads
droBia1
TGTCCCTCTACGACGCGATGTTTGCCCAGTACGGCGTGAAGATAGCACAGGTGAGC----------------CCCGGAGCACATC-----------CAG---CACT--------------------AATTAGAACACACAGATTTGAGTG-AGCCGTG-------------------------A------TGGCT-----GTTTGGG-TTTAGGTACTGGTGACCAAGCCGGACTTCTACAACGAGGAGACACGCAACAATCTSizeHit CountTotal NormTotal
No Reads
droTak1
TGTCCCTCTACGACGCGATGTTTGCCCAGTATGGCGTCAAGATAGCGCAGGTGAGC----------------CCACGAGCACATC-----------CAC--CCACT--------------------AATTAGAACACACTGATTTGAGTG-AGCCGTG-------------------------A------TGGCT-----GTTTGGG-CTTAGGTGCTGGTGACCAAGCCGGACTTCTACAACGAGGAGACACGCAACAATCTSizeHit CountTotal NormTotal
No Reads
droEle1
TGTCCCTGTACGACGCAATGTTTGCCCAGTACGGCGTCAAGATAGCTCAGGTGAGT------------------GGGACCACATC-----------CAG--CCACT--------------------AATTAG-ACACACAGATTTGAGTG-GGCCTTG-------------------------A------TGGCT-----GTTTGGG-CTTAGGTGCTGGTGACCAAGCCGGATTTCTACAACGAGGAGACACGCAACAATCTSizeHit CountTotal NormTotal
No Reads
droRho1
TGTCCCTCTACGACGCGATGTTCGCCCAGTACGGCGTGAAGATAGCTCAGGTGAGT----------------CCGG-GCCACGGC-----------CAC--CCACT--------------------AATTAGAGCACACAGATTTGAGTG-AGCCGTG-------------------------A------TGGCT-----GTTCGGG-CTTAGGTGCTGGTGACCAAGCCGGACTTCTACAACGAGGAGACACGCAACAATCTSizeHit CountTotal NormTotal
No Reads
droFic1
TGTCCCTCTACGACGCGATGTTCGCCCAGTACGGCGTCAAGATTGCCCAGGTGAGC----------------CCCGCAAAGC-TC-----------C-C--CCACT--------------------AATTGG---ACACTGATTTGAGTG-GG--CTT-------------------------G----------C-----GTTCGCG-TTTAGGTGCTGGTGACCAAGCCGGACTTCTACAACGAGGAGACACGCAACAACCTSizeHit CountTotal NormTotal
No Reads
droKik1
TGTCTCTCTACGATGCGATGTTTGCCCAATATGGCGTCAAGATAGCCCAGGTTAGT----------------CCTGA------------------------CCCCT--------------------AATTAG-ACACACGGACTGGAGTG-AG--GCT-------------------------G------TTGCT-----C----CT-TGCAGGTGCTGGTGACCAAGCCGGACTTCTACAACGAGGAGACGCGCAACAATCTSizeHit CountTotal NormTotal
No Reads
droAna3
TGTCGCTCTACGATGCAATGTTCGCCCAGTACGGCGTCAAGATAGCACAGGTGGGT----------------CAA------AATCTCAATCCTAGCCT--A-CCCT--------------------AATTGGGACACACAGATTTGAGCG-AA--GCG-------------------------T------TCG--------TT-GCGTTTCAGGTGCTGGTGACCAAGCCGGACTTCTACAACGAGGAGACACGCAACAATCTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
................................................................................................................................................TGAGCG-AA--GCG-------------------------T------TCG--------TT-GCGTTTCA...................................................2512.002000002
.......CTACGATGCAATGTTCGCCCAGTACGGC....................................................................................................................................................................................................................................2812.002020000
.................................................................................................................................................................................................................................................ACGAGGAGACACGCAACAAT..2011.001010000
.............................................................................................................................................................................................................................GACCAAGCCGGACTTCTACAACGA..................2411.001010000
..............GCAATGTTCGCCCAGTACGGCGTC.................................................................................................................................................................................................................................2411.001000010
.......CTACGATGCAATGTTCGCCCAGT.........................................................................................................................................................................................................................................2311.001010000
.............................................................................................................................................................................................................................GACCAAGCCGGACTTCTACAACGAGGA...............2711.001100000
...........GATGCAATGTTCGCCCAGTACGGCGTC.................................................................................................................................................................................................................................2711.001000010
..........................................................................................................................................................................................................................................TTCTACAACGAGGAGACACGCAACAATCT2911.001100000
................AATGTTCGCCCAGTACGGCGTC.................................................................................................................................................................................................................................2211.001000010
........TACGATGCAATGTTCGCCCAGTACG......................................................................................................................................................................................................................................2511.001100000
...................................GTCAAGATAGCACAGGTGC.................................................................................................................................................................................................................1911.001010000
..............GCAATGTTCGCCCAGTACGGC....................................................................................................................................................................................................................................2111.001000010
..................................................................................................................................................AGCG-AA--GCG-------------------------T------TCG--------TT-GCGTTTC....................................................2211.001000010
...................................GTCAAGATAGCACAGGTGCT................................................................................................................................................................................................................2011.001001000
..................................................................................................................................................AGCG-AA--GCG-------------------------T------TCG--------TT-GCGTTTCA...................................................2311.001000010
.............................................................................................................................................................................................................................GACCAAGCCGGACTTCTACAACGAGG................2611.001100000
droBip1
TGTCGCTCTACGACGCCATGTTCGCCCAGTACGGCGTCAAGATAGCACAGGTGGGC----------------CAA------AATCCGAATCCTAACCT--A-CCCT--------------------AATTGGGACACACAGATTTGAGCG-AG--GTG-------------------------T------TGGCT-----G----CGTTTCAGGTTCTGGTGACAAAGCCGGACTTCTACAACGAGGAGACACGCAACAATCTSizeHit CountTotal NormTotal
No Reads
dp5
TGTCCCTCTACGATGCAATGTTTGCCCAGTACGGCGTCAAGATTGCACAGGTACGT------------------GGCCACAGATC-CGAT--------C--CCCGT--------------------GATTAGGGTACTGGGATTACCGCG-AG--CTG-------------------------TTGTTTCTGGTTGTTTC---TGGT-TGCAGGTGCTGGTGACCAAGCCGGACTTCTACAACGAGGAGACGCGCAACAATCTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
............................................................................................................................................................................................................................................CTACAACGAGGAGACGCGC........1913.0030210000000
..................................................................................................................................................................................................................................AGCCGGACTTCTACAACGAGG................2112.0020200000000
.................ATGTTTGCCCAGTACGGCGTC.................................................................................................................................................................................................................................2111.0010001000000
....................................................................................................................................................................................................................GGTGCTGGTGACCAAGCCGGACT............................2311.0010100000000
.....................................................................................................................................................................................................................................CGGACTTCTACAACGAGGAGACGC..........2411.0010100000000
................AATGTTTGCCCAGTACGGCGT..................................................................................................................................................................................................................................2111.0010100000000
.......................GCCCAGTACGGCGTCAAGATT...........................................................................................................................................................................................................................2111.0010100000000
.......................................................................................................................................................................................................................GCTGGTGACCAAGCCGGACTTCT.........................2311.0010100000000
...........................................................................................................................................................................................................................................TCTACAACGAGGAGACGCGCAAC.....2311.0010100000000
..................................................................................................................................................................................................................CAGGTGCTGGTGACCAAGCCGGA..............................2311.0010100000000
..............GCAATGTTTGCCCAGTACGGC....................................................................................................................................................................................................................................2111.0010100000000
.........................CCAGTACGGCGTCAAGATT...........................................................................................................................................................................................................................1911.0010100000000
........................................................................................................................................................................................................................CTGGTGACCAAGCCGGACTT...........................2011.0010100000000
.............................................................................................................................................................................................................................GACCAAGCCGGACTTCTACAAC....................2211.0010100000000
................AATGTTTGCCCAGTACGGCGTCAAG..............................................................................................................................................................................................................................2511.0010100000000
.........................................................................................................................................................................................................................................CTTCTACAACGAGGAGACGC..........2011.0010010000000
..................................CGTCAAGATTGCACAGGT...................................................................................................................................................................................................................1811.0010000100000
.......................GCCCAGTACGGCGTCAAGATTG..........................................................................................................................................................................................................................2211.0010000100000
.....................................................................................................................................................................................................................GTGCTGGTGACCAAGCCGGACTTCTAC.......................2711.0010100000000
................................................................................................................................................................................................................................................AACGAGGAGACGCGCAAC.....1811.0010000010000
...CCCTCTACGATGCAATGTTT................................................................................................................................................................................................................................................2011.0010100000000
droPer2
TGTCCCTCTACGATGCAATGTTTGCCCAGTACGGCGTCAAGATTGCACAGGTACGT------------------GGCCACAGATC-CGAT--------C--CCCGT--------------------GATTAGGGTACTGGGATTACCGCG-AG--CTG-------------------------TTGTTTCTGGTTGTTTC---TGGT-TGCAGGTGCTGGTGACCAAGCCGGACTTCTACAACGAGGAGACGCGCAACAATCTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................................CAAGCCGGACTTCTACAACGA..................2113.003300000
.............................................................................................................................................................................................................................GACCAAGCCGGACTTCTACAAC....................2212.002200000
...........................................................................................................................................................................................................................GTGACCAAGCCGGACTTCT.........................1912.002200000
.....................................................................................................................................................................................................................................CGGACTTCTACAACGAGGAGACGCGC........2612.002200000
.....................................................................................................................................................................................................................................CGGACTTCTACAACGAGGA...............1912.002200000
.GTCCCTCTACGATGCAATGTTTGCCCAG..........................................................................................................................................................................................................................................2811.001100000
..................................................................................................................................................................................................................................AGCCGGACTTCTACAACGAGGAGAC............2511.001100000
..................................................................................................................................................................................................................................AGCCGGACTTCTACAACGAGGAGACGC..........2711.001100000
.......CTACGATGCAATGTTTGCCCAGTACGGC....................................................................................................................................................................................................................................2811.001010000
...............................................................................................................................................................................................................................CCAAGCCGGACTTCTACAACGAGG................2411.001010000
.................................................................................................................................................................................................................................AAGCCGGACTTCTACAACGAGGA...............2311.001100000
droWil2
TGTCTCTCTATGATGCTATGTTTGCCCAATATGGCGTCAAGATTGCACAGGTTAGTAATAGGGACATAGGACGCATAACAACATG-----------CGTTA-GTCT--------------------AATTAAAACAGAGTGAGTTGTCTG-TACTTGG-ATTGTG-------------------TGTGTATGTATGTATA---T-AT-TTTAGGTGCTTGTTACCAAACCGGATTTCTACAATGAGGAAACACGCAACAATCTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................................................................................TTCTACAATGAGGAAACACGC........2114.00400310
...........................AATATGGCGTCAAGATTGC.........................................................................................................................................................................................................................1913.00330000
..........................................................................................................................................................................................................................................TTCTACAATGAGGAAACACG.........2013.00300300
...................GTTTGCCCAATATGGCGTCAA...............................................................................................................................................................................................................................2112.00200200
.......................................................................................................................................................................................................................GCTTGTTACCAAACCGGAT.............................1912.00200020
...........................................................................................................................................................................................................................................TCTACAATGAGGAAACACGCAA......2212.00200200
............................................................................................................................................................................................................................................CTACAATGAGGAAACACGCA.......2012.00200020
...........................AATATGGCGTCAAGATTGCACAGGT...................................................................................................................................................................................................................2512.00200110
............................................................................................................................................................................................................................................CTACAATGAGGAAACACGC........1912.00200110
.............................................................................................................................................................................................................................TACCAAACCGGATTTCTACAATGAGGA...............2712.00200110
............................................................................................................................................................................................................................................CTACAATGAGGAAACACGCAACAATCT2711.00100010
.....................TTGCCCAATATGGCGTCAAGATTGCACAG.....................................................................................................................................................................................................................2911.00110000
..........................................................................................................................................................................................................................................TTCTACAATGAGGAAACACGCAAC.....2411.00100100
...........GATGCTATGTTTGCCCAATATGGCGT..................................................................................................................................................................................................................................2611.00100010
........................................................................................................................................................................................................................................ATTTCTACAATGAGGAAACACG.........2211.00100010
.........ATGATGCTATGTTTGCCCAATATGGC....................................................................................................................................................................................................................................2611.00101000
...........................................................................................................................................................................................................................................TCTACAATGAGGAAACACGC........2011.00100100
.................................................................................................................................................................................................................................AAACCGGATTTCTACAATGAGG................2211.00100100
...............................TGGCGTCAAGATTGCACAGGTG..................................................................................................................................................................................................................2211.00100010
...................................................................................................................................................CTG-TACTTGG-ATTGTG-------------------TGT............................................................................1911.00100100
...........................AATATGGCGTCAAGATTGCACAGGTGCT................................................................................................................................................................................................................2811.00100100
..............................ATGGCGTCAAGATTGCACA......................................................................................................................................................................................................................1911.00100100
................TATGTTTGCCCAATATGGCGTCAA...............................................................................................................................................................................................................................2411.00100100
.......CTATGATGCTATGTTTGCCCAATAT.......................................................................................................................................................................................................................................2511.00100100
..................................................................................................................................................................................................................................AACCGGATTTCTACAATGAG.................2011.00100010
.........................................................................................................................................................................................................................................TTTCTACAATGAGGAAACACGC........2211.00100100
.............................................................................................................................................................................................................................................TACAATGAGGAAACACGCAACAATCT2611.00100010
............................................................................................................................................................................................................................................CTACAATGAGGAAACACGCAACA....2311.00100010
...............................TGGCGTCAAGATTGCACAGGT...................................................................................................................................................................................................................2111.00100100
..............................................................................................................................AATTAAAACAGAGTGAGTTGTCT..................................................................................................................2311.00100100
..................................................GTTAGTAATAGGGACATAGGA................................................................................................................................................................................................2111.00100010
.....CTCTATGATGCTATGTTTGCCCAATATGGC....................................................................................................................................................................................................................................3011.00100100
..........................................................................................................................................................................................................................................TTCTACAATGAGGAAACAC..........1911.00101000
.............................................................................................................................................................................................................................TACCAAACCGGATTTCTACAAT....................2211.00100010
.....................................................................................................................................................................................................................................CGGATTTCTACAATGAGGAAACA...........2311.00100010
...................................GTCAAGATTGCACAGGTGCT................................................................................................................................................................................................................2050.60300030
droVir3
TGTCACTCTACGATGCGATGTTTGCGCAATATGGTGTTAAGATTGCACAGGTCGGT----------------TACGAGC-----------------TA--G-CCCAAATTGAATGGCAGA------CA---------TGAAAAAACTGCA-AA--CT--------------------------TAAACTCTGATATAT--GA-TGCG-TTTAGGTGCTGGTGACCAAGCCGGATTTCTACAATGAGGAAACACGCAACAATCTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
......................TGCGCAATATGGTGTTAAG..............................................................................................................................................................................................................................1913.003000000000000000100000000000001100000000000000000000000000000000
................................................................................................................................................................................................................................CAAGCCGGATTTCTACAATGAGGA...............2413.003002000000000001000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................GACCAAGCCGGATTTCTACAATGAGGA...............2712.002000000000000000000000000000000000000000000000000000000000000020
................GATGTTTGCGCAATATGGTGTTAAG..............................................................................................................................................................................................................................2512.002000000000000001000000000000000000000000000000000000000000001000
.................................................................................................................................................................................................................................AAGCCGGATTTCTACAATG...................1912.002001000000000000100000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TCTACAATGAGGAAACACGC........2011.001000100000000000000000000000000000000000000000000000000000000000
....ACTCTACGATGCGATGTTTGCGC............................................................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
......................TGCGCAATATGGTGTTAAGATTGC.........................................................................................................................................................................................................................2411.001000000000000000001000000000000000000000000000000000000000000000
.......CTACGATGCGATGTTTGCGCAATATGGT....................................................................................................................................................................................................................................2811.001000000000000000001000000000000000000000000000000000000000000000
................GATGTTTGCGCAATATGGTGTTAA...............................................................................................................................................................................................................................2411.001000000000000000000100000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................AAGCCGGATTTCTACAATGAGGAAACA...........2711.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................TTTCTACAATGAGGAAACACGCAACA....2611.001000000000000000000000000000010000000000000000000000000000000000
.............................................................................................................................................................................................................................GACCAAGCCGGATTTCTACAATGAG.................2511.001000000000000001000000000000000000000000000000000000000000000000
................GATGTTTGCGCAATATGGTGT..................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
........................................................................................................................................................................................................................................ATTTCTACAATGAGGAAACACG.........2211.001001000000000000000000000000000000000000000000000000000000000000
.......CTACGATGCGATGTTTGCGC............................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
................GATGTTTGCGCAATATGGTG...................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
.............TGCGATGTTTGCGCAATATGGT....................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................TTTCTACAATGAGGAAACAC..........2011.001000000000000000000100000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................CTACAATGAGGAAACACGC........1911.001001000000000000000000000000000000000000000000000000000000000000
.....CTCTACGATGCGATGTTTGCGC............................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................CTACAATGAGGAAACACGCAACA....2311.001000000000000000000000000000000000000000000000000000000000001000
..................TGTTTGCGCAATATGGTGTTA................................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
......TCTACGATGCGATGTTTGC..............................................................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
................GATGTTTGCGCAATATGGTGTT.................................................................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
........................................................................TACGAGC-----------------TA--G-CCCAAATTGAAT.....................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
............................ATATGGTGTTAAGATTGCACA......................................................................................................................................................................................................................2111.001000000000000000000100000000000000000000000000000000000000000000
.......CTACGATGCGATGTTTGC..............................................................................................................................................................................................................................................1811.001000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................................................................................GGTGCTGGTGACCAAGCCGGATT............................2311.001000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................TTTCTACAATGAGGAAACA...........1911.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................CTACAATGAGGAAACACGCAAC.....2211.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................GGATTTCTACAATGAGGAAACACGCAAC.....2811.001000000000000000000100000000000000000000000000000000000000000000
......................TGCGCAATATGGTGTTAAGAT............................................................................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
.................ATGTTTGCGCAATATGGTGTTAAGATT...........................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TCTACAATGAGGAAACACGCAACA....2411.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................TCTACAATGAGGAAACACGCA.......2111.001000000000000000000000010000000000000000000000000000000000000000
..................TGTTTGCGCAATATGGTGT..................................................................................................................................................................................................................................1911.001000000000000001000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................GCTGGTGACCAAGCCGGATT............................2011.001000000000000001000000000000000000000000000000000000000000000000
........TACGATGCGATGTTTGCGCA...........................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................CGGATTTCTACAATGAGGAAACACG.........2511.001000000000000000000000000000000010000000000000000000000000000000
...........................AATATGGTGTTAAGATTGC.........................................................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
...........................AATATGGTGTTAAGATTGCACAGGTGCT................................................................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................CTACAATGAGGAAACACGCAACAATCT2711.001000100000000000000000000000000000000000000000000000000000000000
........TACGATGCGATGTTTGCGCAATATGGT....................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................TTCTACAATGAGGAAACACGCAACAATCT2911.001001000000000000000000000000000000000000000000000000000000000000
...CACTCTACGATGCGATGTTTGC..............................................................................................................................................................................................................................................2211.001000100000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................TCTACAATGAGGAAACACGCAACAATC.2711.001001000000000000000000000000000000000000000000000000000000000000
...............CGATGTTTGCGCAATATGGTGTTAAGAT............................................................................................................................................................................................................................2811.001001000000000000000000000000000000000000000000000000000000000000
....ACTCTACGATGCGATGTTTGCG.............................................................................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000001000
..........................................................................................................................................................................................ACTCTGATATAT--GA-TGCG-TTTAG..................................................2311.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................AGGTGCTGGTGACCAAGCCG................................2011.001000000000000000010000000000000000000000000000000000000000000000
...................................GTTAAGATTGCACAGGTGC.................................................................................................................................................................................................................1940.251000100000000000000000000000000000000000000000000000000000000000
droMoj3
TGTCACTCTACGATGCGATGTTTGCCCAGTACGGCGTCAAGATTGCACAGGTCGGTTAAGCGC---------ACTGTAGAGCGTT-----------CAT--C-ACT--------------------ACTGCT-----------------------ACTAACTGTGTGTGTGTGCGTGTGTGTGT------CTGCT-----ATATTGA-TTTAGGTGCTAGTTACCAAGCCGGACTTCTACAACGAGGAAACACGCAACAATCTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.................ATGTTTGCCCAGTACGGCGT..................................................................................................................................................................................................................................2013.003300000
................GATGTTTGCCCAGTACGGCGTCAAG..............................................................................................................................................................................................................................2512.002200000
................GATGTTTGCCCAGTACGGCGT..................................................................................................................................................................................................................................2112.002000002
................................GGCGTCAAGATTGCACAGGTGC.................................................................................................................................................................................................................2211.001100000
....ACTCTACGATGCGATGTTTGCC.............................................................................................................................................................................................................................................2211.001100000
....................................................................................................................................................................................................................................CCGGACTTCTACAACGAGGA...............2011.001100000
....ACTCTACGATGCGATGTTTGC..............................................................................................................................................................................................................................................2111.001100000
......................................................................................................................................................................................................................TGCTAGTTACCAAGCCGGACTTCTA........................2511.001100000
.................ATGTTTGCCCAGTACGGCGTCAAG..............................................................................................................................................................................................................................2411.001100000
.........................................................................................................................................................................................................................................CTTCTACAACGAGGAAACACG.........2111.001000001
................................................................................................................................................................................................................................CAAGCCGGACTTCTACAACGAGGA...............2411.001100000
..............................................................................................................................................................................GTGTGTGTGT------CTGCT-----ATATTGA-TTTAG..................................................2711.001000001
.......CTACGATGCGATGTTTGCCCAGTACGG.....................................................................................................................................................................................................................................2711.001100000
...............CGATGTTTGCCCAGTACGGCGT..................................................................................................................................................................................................................................2211.001100000
............................................................................................................................................................................................................................................CTACAACGAGGAAACACGC........1911.001100000
............................GTACGGCGTCAAGATTGCACA......................................................................................................................................................................................................................2111.001000001
.....................TTGCCCAGTACGGCGTCAAGATTGCAC.......................................................................................................................................................................................................................2711.001000001
................GATGTTTGCCCAGTACGGC....................................................................................................................................................................................................................................1911.001100000
............................GTACGGCGTCAAGATTGCA........................................................................................................................................................................................................................1911.001000001
droGri2
TGTCACTCTACGATGCGATGTTTGCGCAGTATGGCGTCAAGATTGCGCAGGTCGGT----------------TGCGGACAACACT-------------T--TATCA-----AATTACTTACCACGAAAGTGTAACACAGAGACTGAAACTGAA--ACTA------------------------A------TACA---------TGTA-TTTAGGTTCTGGTGACCAAGCCGGACTTCTACAACGAGGAGACACGCAACAATCTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
.....................TTGCGCAGTATGGCGTCAAGATTG..........................................................................................................................................................................................................................2411.00110

Generated: 05/17/2015 at 11:01 PM