ID:

der_840

 Coordinate:

scaffold_4784:17778428-17778658 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-6.7 -6.2 -6.0

Flybase annnotation

CDS [Dere\GG13540-cds]; exon [dere_GLEANR_13795:2]; CDS [Dere\GG13540-cds]; exon [dere_GLEANR_13795:1]; intron [Dere\GG13540-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCAATGTCCAATTGGCTATGCATTCGATCCCGAGACTGGAGCTTGTGGTGGTCGCAAACGCAGCTCCAGAGATTGTGTCTTAAGGTGAAAATAGTCGCACAGCACTTTTAATCAAGCCTCTTGTCGTGTCAAATTAAACCATTATAGCTAGAAAATAAAATGAATTTAGAGTCTTATCAGAAAACAACGAAGCAGCCGCACCGCATTTCCACCTATAAAGGAGGCGCTGATCTCAGCGATGAGGCAGTTGAAAGCCTATTGAATGTGGCAATTGTCGTTAGTCTTGGCCTGCCTGCTACCTGGTTACCCCTGGTTGCAGGTGCAGGCGGTT
*******************************************************************((((.(((......((((((...............))))))....)))..))))....************************************************************************************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total V040
embryo
 M057
embryo
 M055
female body
 V108
head
.......................................................................................................ACTTTTAATCAAGCCTCTTGTC.............................................................................................................................................................................................................. 22 0 1 2.00 2 1 1 0 0
..........................................................................................................................................................................................................................................................................GGCAATTGTCGTTAGTCTT.............................................. 19 0 1 1.00 1 0 1 0 0
.................................................................................................................AAGCCTCTTGTCGTGTCA........................................................................................................................................................................................................ 18 0 1 1.00 1 1 0 0 0
.....................ATTCGATCCCGAGACTGGAGC................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0
.....................ATTCGATCCCGAGACTGGA................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0
...................................................................AGAGATTGTGTCTTAAGGTGA................................................................................................................................................................................................................................................... 21 0 1 1.00 1 1 0 0 0
......................................................................................................................................TAAACCATTATAGCTAGAA.................................................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0
.......................................................................ATTGTGTCTTAAGGTGAA.................................................................................................................................................................................................................................................. 18 0 1 1.00 1 1 0 0 0
..................................................................CAGAGATTGTGTCTTAAGGTGA................................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0
.....................................................................AGATTGTGTCTTAAGGTTAAAATA.............................................................................................................................................................................................................................................. 24 1 1 1.00 1 1 0 0 0
.............................................................................................................................................................................................................................................................................AATTGTCGTTAGTCTTGGCCTGCCTGC................................... 27 0 1 1.00 1 0 1 0 0
............................CCCGAGACTGGAGCTTGTGGTGGT....................................................................................................................................................................................................................................................................................... 24 0 1 1.00 1 1 0 0 0
................................................................................................GGACAGCACTTTTAATCAAGC...................................................................................................................................................................................................................... 21 1 1 1.00 1 0 1 0 0
.............................................................AGCTCCAGAGATTGTGTCTTAAGGT..................................................................................................................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0
......................................................................GATTGTGTCTTAAGGTGA................................................................................................................................................................................................................................................... 18 0 1 1.00 1 1 0 0 0
....................................................CGCAAACGCAGCTCCAGAGATTGTGT............................................................................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0
....................CATTCGATCCCGAGACTGG.................................................................................................................................................................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0
...................................................................................................................................................................ATTTAGAGTCTTATCAGAA..................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0
..................................................................................................................................................................AATTTAGAGTCTTATCAGA...................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0
......................................................................................................................................TAAACCATTATAGCTAGAAAATAA............................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0
....................................................................GAGATTGTGTCTTAAGGTGA................................................................................................................................................................................................................................................... 20 0 1 1.00 1 1 0 0 0
.......................................................................................................AATTTTAATCAAGCCTCTTGTC.............................................................................................................................................................................................................. 22 1 1 1.00 1 1 0 0 0
.........................................................................................................................................................AATAAAATGAATTTAGAGTCC............................................................................................................................................................. 21 1 1 1.00 1 0 1 0 0
.................................GACTGTAGCTTGTGGTGGT....................................................................................................................................................................................................................................................................................... 19 1 1 1.00 1 1 0 0 0
............................................................................................AGTCGCACAGGACTTAAAATC.......................................................................................................................................................................................................................... 21 3 2 0.50 1 0 0 1 0
...................................CTGGAGCTTGTGGTGGTGGG.................................................................................................................................................................................................................................................................................... 20 2 4 0.25 1 1 0 0 0
.................................................................CCGGAGATTGGGTCTTATG....................................................................................................................................................................................................................................................... 19 3 13 0.08 1 0 0 0 1

Anti-sense strand reads

CGTTACAGGTTAACCGATACGTAAGCTAGGGCTCTGACCTCGAACACCACCAGCGTTTGCGTCGAGGTCTCTAACACAGAATTCCACTTTTATCAGCGTGTCGTGAAAATTAGTTCGGAGAACAGCACAGTTTAATTTGGTAATATCGATCTTTTATTTTACTTAAATCTCAGAATAGTCTTTTGTTGCTTCGTCGGCGTGGCGTAAAGGTGGATATTTCCTCCGCGACTAGAGTCGCTACTCCGTCAACTTTCGGATAACTTACACCGTTAACAGCAATCAGAACCGGACGGACGATGGACCAATGGGGACCAACGTCCACGTCCGCCAA
**************************************************************************************************************************************************************************************************************((((.(((......((((((...............))))))....)))..))))....******************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M055
female body
 V108
head
 V040
embryo
....................................................................................................................................................................................................................................................................................................................GGACCAACGTCCACGTCCGCCAA 23 0 1 1.00 1 1 0 0
.......................................................................................................................................................................................TGTTGCGTCGCTGGCGTGGC................................................................................................................................ 20 3 9 0.11 1 0 1 0
............................................CGCCACCAGCGTTTGCCAC............................................................................................................................................................................................................................................................................ 19 3 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4784:17778378-17778708 - der_840 GCAATGTCCAATTGGCTATGCATTCGATCCCGAGACTGGAGCTTGTGGTGGTCGCAAACGCA----------GCTCCAGAGATTGTGTCTTA-----AGGTGAAAATA---------------------------GT-CG--------------CA----CAGCACTTTTAATCAAGCCTCT--TGTCGTGTCAA--ATT-------------------------------------AAA-CCATT-AT--------------AGCTAGAAAAT-AAAATGAATTTA--------------------------GAGTCTTATCAGAA-AACA--ACGAA-GCAGC--CGCACCGCATTT-CCACCTATAAAGGA-GGCGCT----GA--TCTCA--GCGATGAG-GCAGT------TGA--AAGC-------C--TATT--------GAATGTGGCAATTGTCG---TTAGTCTTGGCCTGCCTGCTA-CC-----TGGTTACCCCTGGTTGCAGG--TGCAGGCGGTT
droYak3 v2_chr3L_random_081:142385-142715 - GCAATGTCCTATTGGCTATGCATTCGATCCGGAAACTGGAGCTTGTGGTGGTCGCATACGCA----------GCTCCAGCGATTGTATCTTT-----AAGTGAAAATA---------------------------AT-CG--------------CA----GAGCACTTTTAATTAAGCCTCT--TGTCGTGTCAA--ATA-------------------------------------A-A-CCATA-AT--------------AGCTAGAAAAT-AAAGTGAGTTTA--------------------------GAGTCTTATCAGAG-AACA--AGCTAACCAGC--CGCACAGCATTT-CCACCTATAAAGAA-GGCACT----GA--TCTCG--GCGATGAG-GCAGT------TGA--AAGC-------C--TATT--------GAATGTGGCAATTGTTG---TTAGTCTTGGCCTGCCTGCTA-CC-----TGGTTGCCTCCGGGTGCAGG--TGCAGGCGGTT
droSec2 scaffold_0:7630099-7630426 - dse_459 GCAATGTCCTATTGGCTACGCATTCGATCCCCAAACTGGAGCTTGTGGTGGACGCATACGTA----------GCTCCAGCGATTGTACTTTC-----AAGTGAACATA---------------------------AT-CG--------------CA----CAACACTTTTAATTAAGCCTCT--TGTCGTGTCAA--ATT-------------------------------------AAA-CAATT-AT--------------AGCTAGAAAAT-AAACTGAATTTA--------------------------GTGTCTTATCAGAG-AACA--AGCAAGC------CGCACAGCATTT-CCACCTATAAAGAA-GGCACT----GA--TCTCG--GCGATGAG-GCAGT------TGA--AAGC-------C--TATT--------GAATGTGGCAATTGTTG---ATAGTCTTGGCCTGCCTGTTA-CC-----TGGCTACCTATGGTTGCAGG--TGCAGGCGGTT
droSim2 3l:15154259-15154586 - GCAATGTCCTATTGGCTTCGCATTCTATCCCCAAACTGGAGCTTGTGGTGGACGCATACGTA----------GCTCCAGCGATTGTACTTTC-----AAGTGAACATA---------------------------AT-CG--------------CA----CAACACTTTTAATTAAGCCTCT--TGTCGTGTCAA--ATT-------------------------------------AAA-CAATT-AT--------------AGCTAGAAAAT-AAACTGAATTTA--------------------------GAGTCTTATCAGAG-AACA--AGCCAAC------CGCACAGCATTT-CCACCTATAAAGAA-GGCACT----GA--TCTCG--GCGATGAG-GCAGT------TGA--AAGC-------C--TATT--------GAATGTGGCAATTGTTG---ATAGTCTTGGCCTGCCTGTTA-CC-----TGGCTACCTCTGGGTGCAGG--TGCAGGCGGTT
dm3 chr3L:15520540-15520871 - GCAATGTCCTATTGGCTACGCATTCGATCCCCAAACTGGAGCTTGTGGTGGACGT--ACGTA-----ATC--GCTCCAGCGATTGTACTTTA-----AAGTGAAAATA---------------------------AT-CG--------------CA----CCAAACTTTTAATTAAGCCTCT--TGTCGTGTCAA--ATT-------------------------------------AAA-CAATT-AT--------------AGCTAGAAAATAAAAATGAATTTA--------------------------GAGTCTTATCAGAG-AACA--AGCAAAC------CGCACAGCATTT-CCACCTATAAAGAA-GGCACT----GA--TCTCG--GCGATGAG-GCAGT------GCAGAAAGC-------C--TATT--------GAATGTGGCAATTGTTG---ATAGTCTTGGCCTGCCTGTTA-CC-----TGGCTACCTCTGGGTGCAGG--TGCAGGCGGTT
droEug1 scf7180000408844:251883-252212 - GCAATGTCCTATTGGCTATGCCTTCGATTCGGAAACTGGAGCTTGTGGTGGTCTCATAAGAA----------ACTCCAATGATTGTACTTTA-----AAGTAAAAATAA-AA--------------------------CAGAAAGAACTTAAAGCA--GAAATCACTTTTAATTAAGCCTCT--TGTCATGTCAT--ATA-------------------------------------AAA-TCATTAAT--------------AGCTAGAAAAT-AAAATGAATTTA--------------------------GAGTCTTATCAATG-AACA--AGCAAAA------TGAA---------CCAGCTATAAAGAA-GCCACT---GGA--TCTGT--TCGATGAG-ACAGT------TGA--AAGC-------C--AATT--------ATATGTGGAAATTGTTG---ATAGTCTTGGCCTGCCTGTTG-CC-----TGGCTAC---------CAGG--TTCAGGCGGTC
droBia1 scf7180000302334:875886-876213 + GCAGTGTCCCATTGGATATGCCTTCGATTCGCAAACTGGAGCTTGCGGGGGTCGCATAAGAA----------ACTCCGACGACTGTGCGCTG-----AAGTAGAGGAAAGCCGACAAA-----------------AT-CA--------------CA----CACCACTTTTAATTAGGCCTCT--TGTCATGTCAA--ATA-------------------------------------AAG-TCGTT-AT--------------AGCTAGGAAAT-AAAATGAATTTG--------------------------GAGTCTTATCTGAG-AACA--AGCAAAC------CGAAGCGTATTT-CCACCTATAAAGAA-GGCTCT----GA--TCTGG--GCGATGAG-GCAGT------AT---AAGC-------C--TATT--------AAATGTGGCAATTGTTG---ATATTCCTGGCCTGCCTGCTG-CC-----TGGCCAC---------CAGG--TGCGGGCGGTT
droTak1 scf7180000415795:943767-944079 - GCAATGTCCTATCGGCTATGCCTTCGATTCTCAAACTGGAGCTTGCGGTGGTCGCATAAGAA----------ACTCCAACGATTGTACGCTG-----AAGTAAAA---------------------------------------------------------------TTAATTAAGCCTCT--TGTCATGTCAAAAATA-------------------------------------AAA-TCATT-AT--------------AGCTAGAAAAT-AAAATGAATTTA--------------------------CCGTCTTATCACTG-AACA--AGCTAAA------CGAACCGTATTTCCCACCTATAAAGAA-GGCTCT----GA--TCTGC--GCGATGAG-TTAGT------TGA--AAGG-------T--TATTATTTCCAGATATGTGGCAATTTTTG---ATAGTCTTGGCCTGCCTGTTG-CC-----TGGCCAC---------CAGG--TGCAGTCGGTT
droEle1 scf7180000491000:910447-910779 - ACAATGTCCTATTGGCTATGTCTTCGATTCGGAGAGTGGAGCTTGTGGTGGTCGTAAACGAG----------ATTCGGCCGATTGTACGATG-----AAATAAAAAG-T-------T-AATAAGCTAAAAAAACAAA-AG--------------AA----GAAATCATTCAATTAGGCTTCT--TGTCATGTCAA--CTA------------------------------------------------A--------------AGCTAGAAAAT-AAAATTAACCAA--------------------------GAGTCTTATCAGAT-AACA--AGCGAAACAGTAATGAACAGTATTT-GCACCTATAAAGAA-GGCTCT----GA--TCCGC--GAGATGAG-ACAGT------CGA--AACA-------GTCTA-----------TATGTGGCAGTTGTTG---ATTGTCTTTGGCTGCCTGTTA-CC-----TGTAAAT---------CAGG--TACGGGCGGAT
droRho1 scf7180000770847:12173-12484 - GCAATGTCCCATTGGATACGTCTTCGACACCGAAACTGGGGCATGTGGTCGTC---AGCGAG----------CTTCTGCCGATTGTACGTTA-----AAATAAAAGG-C-------T-A----------------A-ACA--------------------G-AACCAATTAATTAAGCCTCT--TGTCGTGTCAA--ATA-------------------------------------AAA-TCATT-AT--------------AGCTAGAAAAT-AAAATGAATTTA--------------------------GCGTCTTATCAGAG-AACA--AGCAATC------CGAACAGAATTT-CCACCTATAAAGAA-GGCTCT----GA--TCCGC--GAGATGAG-ACAGT------TGA--AAGT-------C--TAT-----------ATGTGGCAGTTGTTG---ATAGTCTTTGGCTGCCTGTTG-CC-----TGGATAT---------CAGG--TGCGGGCGGTT
droFic1 scf7180000454065:1789040-1789366 + GCAATGTCCTATTGGCTACGCCTTCGATCCCGAAACTGGAGCTTGTGGTGGCCGCATACGCA----------GCTCAGACGATTGTATTTTG-----AAATAAGAAA-T-------T-AAT-AAAA----AAAGAA-------------------AAAACAAACACTTTTAATTAAGCCCCT--TGTCGTGTCAA--ATA-------------------------------------AAA--------T--------------AGCTGGAAAAT-CAAACGAATTTT--------------------------GTGTCTTATCGAAG-TACA--AGCAAAG------TGTTGCGTATTTTTTAGCTATAAAGTA-GGTTCT----GA--TCTCT--CGGATGAG-ACAGT------TGA--AAGC-------T--TGTT--------TTATGTGGCGGTTGTTG---ATATTGCTGGCCTGCCTGTTA-CC-----TCATTGT---------CAGG--TGCAGGCGGCC
droKik1 scf7180000302686:1236707-1237044 + GCAATGTCCCTTTGGATATGCATTTGACGCCGAAACTGGAGCATGTGGTGGCCTTATACGGA----------ACAGCGTCAACTGTACAATG-----AGGTGAAGAG-C-------T-AAA-AACA-------------AGAAACA----AATGAAAAAAAAGAACTTTTAATTAAGCCCCTTGTGTCATGTCAA--ATA-------------------------------------AAA-TCATT-AT--------------AGCTAGAAAAT-AAACTGAATTAAG--------------------AG--AGAGTCTTATCGCAA-AAACCAAGCAAAA------CGAA---------CCACCTATAAAGAA-GGCTCT----GA--TCGGG--AAGATGGG-ACAGT------TGA--AAGC-------C--TAT-----------ATGTGGCAGCTATTG---ATTGTGTTCGCCTGCCTGTCA-CC-----TGGCTACCAC------CAGG--TGCAGGCGGTT
droAna3 scaffold_13337:6468986-6469314 - GCAGTGTCCCATAGGATATGCCTTCAATGGCGATACCGGAGCATGTGGGGGACGCCTTCAAA----------ATTTCGTTGACTGTACGCTA-----AAGTGAAAACAA-TATATATT-----------------A-ACT------------------GAAATCACTTTTAATTAAGCCTCTATTGTCATGTCAA--ATT-------------------------------------AATTTCATT-AA--------------AGCTAGAAAAT-AAACTGAATTTA--------------------------GAGTCTTATCAGCG-AACA--AGCACGA------GGAGTCATAGTC-CCACCTATAAAGACTGCCACT----GA--TCCGA--GAGAGGAAAACAGT------CGA--AAGC-------C--TAT---------ATATGTGGCAG---TTG---ATACTTCTGGCCTGCCTGCTG-CC-----TGGCCTC---------CAGG--TGCGGGCAGCC
droBip1 scf7180000396709:205135-205463 - GCAGTGTCCTATCGGATATGCCTTCAATGGTGACACCGGAGCATGTGGTGGAAGGCTTCAAA----------ATTTTGTCGATTGTACGCTG-----AAGTGAAAATAA-TGTATATA-----------------A-ACT------------------GAAATCACTTTTAATTAAGCCTCTATTGTCGTGTCAA--ATT-------------------------------------AATTTCATT-AA--------------AGCTAGAAAAT-AAAAAGAATTTA--------------------------GAGTCTTATCAGCG-AACA--AGCTAGA------CGAGTCATAGTC-CCACCTATAAAGACCGGCCCT----GA--TCCGA--AAGATGAAAACAGT------CGA--AAGC-------C--TAT---------ATATGTGGCAG---TTG---ATACTTCTGGCCTGCCTGCTG-CC-----TGGCCTC---------CAGG--TGCGGGCAGCA
dp5 XR_group6:230577-230911 + GCAGTGTCCCATTGGATATGCATTCAACGCTACGACTGGAGCTTGTGGCGGACGTACACGGA----------GCTCCATGGACTGTACTGTACGCTGAAGTAGTGA--------------G-AGCT------------------------AAAGTAGAGAAAACATTTTTAATTA-GCCCCG--TGTCTTGTCAA--ATA-------------------------------------AAA-TCAAT-TT--------------AGCTAGCAAAT-AAATTGAGCTTAT--------------------AGCCAGAGCCTTATCTCATTGACG--AGCGAAC------CGAAGCGAACTC-CCACCTATAAAGGA-GGCCCT----GA--CCTGG--AAGATGGGAACAGT------TGA--AAGC-------C--TAT-----------ATGTGGAAGTTGTTG---TTACTCTTTGGCTGCCTGCTG-CC-----TGGCCAT---------CAGG--TGGGGGCGGCA
droPer2 scaffold_12:916384-916631 + GCAGTGTCCCATTGGATATGCATTCAATGCTACGACTGGAGCTTGCGGCGGACGTACACGGA----------GCTCCATGGACTGTACTGTACGCTGAAGTAGTGA--------------G-AGCT------------------------AAAGTAGAGAAAACATTTTTAATTA-GCCCCG--TGTCTTGTCAA--ATA-------------------------------------AAA-TCAAT-TT--------------AGCTAGCAAAT-AAATTGAGCTTAT--------------------AGCCAGAGCCTTATCTCATTGACG--AGCGAAC------CGAAGCGAACTC-CCACCTATAAAGGA-GGCCCT----GA--CCT-----------------------------------------------------------------------------------------------------------------------------------------
droWil2 scf2_1100000004949:1852065-1852376 - ACAGTGTCCCTTCTGCTACTTATTCAATACGGACAATGGCAGCTGTACAGGCCTAATGGCAA----------A---------TTG------------------------------------------------------------------------------TTCGTTTAATTAATTTTCA--TGTTGTATCAA--ATC-------------------------------------TTT-CAGAC-AGTACGA---------TACAATACAAT-AAATTGATTTTAAAATGAAGTATTAAAGTAGCGTG--TGCATCTTATCAAAT-TGTT--AGATTT--------------TCGCT-TCACTTATAAAGCG-AGTGTT----AT--TGGGAAATCGACGCA-ACAGTTCTT--CGA--ATTT-------C---TGT--------GGATGTGGAAAGTTTTG---TTACCGCTTCTTTGCCTAATGGCA-----TGGCCGG---------CAGGATTACAGGCCGAA
droVir3 scaffold_13049:20297269-20297610 - dvi_20743 GCAGTGCCCCATCGGCTATGCCTACAACGAGCTGGGCGGCACGTGCAGCGGACGCATCCAAGATGTGGCCGCGTGCCGTCAGCCGTGAGCTG-----AGGCGAACA----------------------------------------------------------TTTACCAATTAAGCTTTT--CGTTGTCTTTG--CTA-------------------CGTT-TTTTTT---------T-TATGT-TGTGCTGTGCAATTAACACAATTAATA-AATATGAACTAA--------------------------TCGCCTTATCGAAC-TGCG--AACTGTG------TGCGCCTC-TAA-ACGCCTATAAAGCA-GCCG-------A--CTCCG--GCTGCGGA-TCTC-------------------AACAG---TAT--------TGATGTTGAAAGTTCTAACAATTGTCATTGGCTGCCTGCTG-GCCTTGCTGGGCTC---CGGA--TCGG--TGCGGGCGGCC
droMoj3 scaffold_6680:8008592-8008928 - GCAGTGTCCCATTGGCTATGCCTACAGCGAGCAGCTCGGCACGTGCAGCGGACGCATCGCGG-----------ATCAGC-----------TG-----CCGCGAAC----------------------------------------------------------ATGTTTCAATTAAGACTCT--CA-CTTGTCAC--CTGTGGCAATTTCTCGATGCTTCTGTTGTTCTTTTAATTGGCAATTATG-AC-----AGCAATTAATACAAAATAAA-ACTGTGAGCTAA--------------------------TCACCTTATCTAAG---------------------GCACTGGGGCT-ACTACTATAAAGCA-GACGGT----GCCAGCTCG--GCTGTTAG-CCAGT------TGC--GAAACGCAATTC---GTT--------TTATGTTGCAGCTTCTT---TTGGCATTGAGCTGCCTGTGG-CC-----CTTGGAG---------TGGG--CGCAGGCGGTG
droGri2 scaffold_15110:16605300-16605606 + ACAGTGTCCCATTGGTTATGCGTTCAATGAGCCAAATGGCACCTGCAGTGGACGCATCGCTG----------ACATACCGGATTGTAGGCAA-----TAA----------------------------------------------------AAAAGAACATATTTTTTTAATTAAGAACTA--TGTTGTGTTAA--ACT-------------------------------------GTA-TTGTA-AC--------------AAATA--AAAA-AATATGAGCTAA--------------------------CTGCCTTATCGTAG-TACATGAGCC----------GAA-------T-GCGCCTATAAAGCA-CACGTCTTTTGG--TGTCT--TCGCCA---ACAGTTATCGTCGA--GGCC---AAGTA---ATT--------TTATGTTGAAACTGCTA---ATTGTAATTGGCTGC----TG-TC-----TGCCGCT-----------CA--ATCAGGCGGCA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
GCAATGTCCAATTGGCTATGCATTCGATCCCGAGACTGGAGCTTGTGGTGGTCGCAAACGCA----------GCTCCAGAGATTGTGTCTTA-----AGGTGAAAATA---------------------------GT-CG--------------CA----CAGCACTTTTAATCAAGCCTCT--TGTCGTGTCAA--ATT-------------------------------------AAA-CCATT-AT--------------AGCTAGAAAAT-AAAATGAATTTA--------------------------GAGTCTTATCAGAA-AACA--ACGAA-GCAGC--CGCACCGCATTT-CCACCTATAAAGGA-GGCGCT----GA--TCTCA--GCGATGAG-GCAGT------TGA--AAGC-------C--TATT--------GAATGTGGCAATTGTCG---TTAGTCTTGGCCTGCCTGCTA-CC-----TGGTTACCCCTGGTTGCAGG--TGCAGGCGGTTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................................................................................ACTTTTAATCAAGCCTCT--TGTC.....................................................................................................................................................................................................................................................................................................................................................2212.0020101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCAATTGTCG---TTAGTCTT......................................................1911.0010100000
..............................................................................................................................................................................AAGCCTCT--TGTCGTGTCA...............................................................................................................................................................................................................................................................................................................................................1811.0010001000
.....................ATTCGATCCCGAGACTGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
.....................ATTCGATCCCGAGACTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
.............................................................................AGAGATTGTGTCTTA-----AGGTGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010001000
.......................................................................................................................................................................................................T-------------------------------------AAA-CCATT-AT--------------AGCTAGAA..................................................................................................................................................................................................................................................................1911.0010001000
.................................................................................ATTGTGTCTTA-----AGGTGAA.........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001000
............................................................................CAGAGATTGTGTCTTA-----AGGTGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010001000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGTCG---TTAGTCTTGGCCTGCCTGC...........................................2711.0010100000
............................CCCGAGACTGGAGCTTGTGGTGGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010001000
.............................................................A----------GCTCCAGAGATTGTGTCTTA-----AGGT............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000
................................................................................GATTGTGTCTTA-----AGGTGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010001000
....................................................CGCAAACGCA----------GCTCCAGAGATTGTGT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000
....................CATTCGATCCCGAGACTGG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010001000
..........................................................................................................................................................................................................................................................................................ATTTA--------------------------GAGTCTTATCAGAA-.........................................................................................................................................................................................................1911.0010001000
.........................................................................................................................................................................................................................................................................................AATTTA--------------------------GAGTCTTATCAGA...........................................................................................................................................................................................................1911.0010001000
.......................................................................................................................................................................................................T-------------------------------------AAA-CCATT-AT--------------AGCTAGAAAAT-AA............................................................................................................................................................................................................................................................2411.0010100000
..............................................................................GAGATTGTGTCTTA-----AGGTGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010001000
...............................................................................................................................................................................................................................................................................AAT-AAAATGAATTTA--------------------------GAGTCC..................................................................................................................................................................................................................2111.0010100000
droYak3
GCAATGTCCTATTGGCTATGCATTCGATCCGGAAACTGGAGCTTGTGGTGGTCGCATACGCA----------GCTCCAGCGATTGTATCTTT-----AAGTGAAAATA---------------------------AT-CG--------------CA----GAGCACTTTTAATTAAGCCTCT--TGTCGTGTCAA--ATA-------------------------------------A-A-CCATA-AT--------------AGCTAGAAAAT-AAAGTGAGTTTA--------------------------GAGTCTTATCAGAG-AACA--AGCTAACCAGC--CGCACAGCATTT-CCACCTATAAAGAA-GGCACT----GA--TCTCG--GCGATGAG-GCAGT------TGA--AAGC-------C--TATT--------GAATGTGGCAATTGTTG---TTAGTCTTGGCCTGCCTGCTA-CC-----TGGTTGCCTCCGGGTGCAGG--TGCAGGCGGTTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
........................CGATCCGGAAACTGGAGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
....................................................................................................................................................................................CT--TGTCGTGTCAA--ATA-------------------------------------A-A-CC..............................................................................................................................................................................................................................................................................................2011.00100100000000
........................CGATCCGGAAACTGGAGCTTGTGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100100000000
..................................................................................................................................................................GCACTTTTAATTAAGCCTCT--TGTCGT...................................................................................................................................................................................................................................................................................................................................................2611.00100010000000
.........................................................................CTCCAGCGATTGTATCTTT-----AAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................2320.50100100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTGTTG---TTAGTCTTGGCCC.................................................2120.50100100000000
.....GTCCTATTGGCTATGCATTCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50100010000000
.........................................................ACGCA----------GCTCCAGCGATTGTATC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2220.50100100000000
droSec2
GCAATGTCCTATTGGCTACGCATTCGATCCCCAAACTGGAGCTTGTGGTGGACGCATACGTA----------GCTCCAGCGATTGTACTTTC-----AAGTGAACATA---------------------------AT-CG--------------CA----CAACACTTTTAATTAAGCCTCT--TGTCGTGTCAA--ATT-------------------------------------AAA-CAATT-AT--------------AGCTAGAAAAT-AAACTGAATTTA--------------------------GTGTCTTATCAGAG-AACA--AGCAAGC------CGCACAGCATTT-CCACCTATAAAGAA-GGCACT----GA--TCTCG--GCGATGAG-GCAGT------TGA--AAGC-------C--TATT--------GAATGTGGCAATTGTTG---ATAGTCTTGGCCTGCCTGTTA-CC-----TGGCTACCTATGGTTGCAGG--TGCAGGCGGTTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.....................ATTCGATCCCCAAACTGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.0040040
........................................GCTTGTGGTGGACGCATACGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030030
........................................GCTTGTGGTGGACGCATACGTA----------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2213.0030030
.............................................................................................................................................................................................................................................AAA-CAATT-AT--------------AGCTAGAAAA................................................................................................................................................................................................................................................................2012.0020020
.....................................................................................................................................................................................................ATT-------------------------------------AAA-CAATT-AT--------------AGCTAGAAA.................................................................................................................................................................................................................................................................2212.0021010
............................................................................................................................................................................................................................................................................................TTA--------------------------GTGTCTTATCAGAG-A........................................................................................................................................................................................................1812.0020020
............................CCCCAAACTGGAGCTTGTGGTGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
.....................................................................................................GAACATA---------------------------AT-CG--------------CA----CAACACT..........................................................................................................................................................................................................................................................................................................................................................................2011.0011000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGTTG---ATAGTCTTGGCCTGCCT.............................................2411.0010010
.......................................................................................................................................................................................................T-------------------------------------AAA-CAATT-AT--------------AGCTAGAAAAT-AAACT.........................................................................................................................................................................................................................................................2711.0010010
............................................................................CAGCGATTGTACTTTC-----AAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
.......................................................ATACGTA----------GCTCCAGCGATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.........................................CTTGTGGTGGACGCATACGTA----------.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
........CTATTGGCTACGCATTCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
............................................................................................................................................................................................................................................................................GAAAAT-AAACTGAATTTA--------------------------GT......................................................................................................................................................................................................................2011.0010010
..........................................TTGTGGTGGACGCATACGTA----------GCTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
................TACGCATTCGATCCCCAAACTGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
........CTATTGGCTACGCATTCGATCCCCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
...........................................................................................................................................................................................................................................................................................TTTA--------------------------GTGTCTTATCAGAG-.........................................................................................................................................................................................................1811.0010010
...........................................TGTGGTGGACGCATACGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
.................ACGCATTCGATCCCCAAACTGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
......................................................................................................................................................................................................................................................................................................................................................................................................................................................T--------GAATGTGGCAATTGTTG---ATA...........................................................2111.0010010
.............................................................................................................................................................................TAAGCCTCT--TGTCGTGTCAA--............................................................................................................................................................................................................................................................................................................................................2011.0010010
..............................................................................................................................................................................................................................................AA-CAATT-AT--------------AGCTAGAAA.................................................................................................................................................................................................................................................................1811.0010010
........................................GCTTGTGGTGGACGCATACGTA----------G........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
..................CGCATTCGATCCCCAAACTGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010
......................................................................................................................................................................................................TT-------------------------------------AAA-CAATT-AT--------------AGCTAGAA..................................................................................................................................................................................................................................................................2011.0010010
.....GTCCTATTGGCTACGCATTC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
...ATGTCCTATTGGCTACGCATTCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCAATTGTTG---ATAGT.........................................................1811.0010010
..........................................TTGTGGTGGACGCATACGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT--------GAATGTGGCAATTGTTG---..............................................................2011.0010010
..............................................................................................................................................................................................GTCAA--ATT-------------------------------------AAA-CAATT-AT--------------AGCTAGAAA.................................................................................................................................................................................................................................................................2711.0010010
...............CTACGCATTCGATCCCCAAACTGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTACCTATGGTTGCAGG--TGCAGGC....2611.0010010
.....GTCCTATTGGCTACGCATT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
.............................................................A----------GCTCCAGCGATTGTACTTTC-----AAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010010
.........................................CTTGTGGTGGACGCATACGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
....................................................CGCATACGTA----------GCTCCAGCGATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010010
...................GCATTCGATCCCCAAACTGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0011000
...........................................TGTGGTGGACGCATACGTA----------G........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
........................................GCTTGTGGTGGACGCATA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
droSim2
GCAATGTCCTATTGGCTTCGCATTCTATCCCCAAACTGGAGCTTGTGGTGGACGCATACGTA----------GCTCCAGCGATTGTACTTTC-----AAGTGAACATA---------------------------AT-CG--------------CA----CAACACTTTTAATTAAGCCTCT--TGTCGTGTCAA--ATT-------------------------------------AAA-CAATT-AT--------------AGCTAGAAAAT-AAACTGAATTTA--------------------------GAGTCTTATCAGAG-AACA--AGCCAAC------CGCACAGCATTT-CCACCTATAAAGAA-GGCACT----GA--TCTCG--GCGATGAG-GCAGT------TGA--AAGC-------C--TATT--------GAATGTGGCAATTGTTG---ATAGTCTTGGCCTGCCTGTTA-CC-----TGGCTACCTCTGGGTGCAGG--TGCAGGCGGTTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................TCCAGCGATTGTACTTTC-----AAGTGAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00202000000000000000
....................................................................................................................................................................ACTTTTAATTAAGCCTCT--TGTC.....................................................................................................................................................................................................................................................................................................................................................2211.00100010000000000000
..........ATTGGCTTCGCATTCTAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................TGA--AAGC-------C--TATT--------GAATGTGG..........................................................................2011.00100010000000000000
..............................................................................GCGATTGTACTTTC-----AAGTGAACATA---------------------------AT-C......................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
...........................................................................CCAGCGATTGTACTTTC-----AAGTGAACAT......................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000000000
..............................................................................................................................................................................................................................................................................AAAT-AAACTGAATTTA--------------------------GA......................................................................................................................................................................................................................1811.00100010000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TATAAAGAA-GGCACT----GA--TCTCG--GCG..................................................................................................................................2511.00100000000000001000
...........................................................................................................................................................................................................................................................................AGAAAAT-AAACTGAATTTA--------------------------GAG.....................................................................................................................................................................................................................2211.00101000000000000000
.........................................................................CTCCAGCGATTGTACTTTC-----A...............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
dm3
GCAATGTCCTATTGGCTACGCATTCGATCCCCAAACTGGAGCTTGTGGTGGACGT--ACGTA-----ATC--GCTCCAGCGATTGTACTTTA-----AAGTGAAAATA---------------------------AT-CG--------------CA----CCAAACTTTTAATTAAGCCTCT--TGTCGTGTCAA--ATT-------------------------------------AAA-CAATT-AT--------------AGCTAGAAAATAAAAATGAATTTA--------------------------GAGTCTTATCAGAG-AACA--AGCAAAC------CGCACAGCATTT-CCACCTATAAAGAA-GGCACT----GA--TCTCG--GCGATGAG-GCAGT------GCAGAAAGC-------C--TATT--------GAATGTGGCAATTGTTG---ATAGTCTTGGCCTGCCTGTTA-CC-----TGGCTACCTCTGGGTGCAGG--TGCAGGCGGTTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAGC-------C--TATT--------GAATGTGGCAATTGT...................................................................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100300000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................AAAATGAATTTA--------------------------GAGTCTTAT...............................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................AATT-AT--------------AGCTAGAAAATAAA............................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............CTACGCATTCGATCCCCAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGGGTGCAGG--TGCAGGC....1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................AAACTGGAGCTTGTGGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................AGC-------C--TATT--------GAATGTGGCA........................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................GCCTCT--TGTCGTGTCAA--ATT-------------------------------------AAA-C...............................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................CG--GCGATGAG-GCAGT------GCAGAA...........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000
....................CATTCGATCCCCAAACTGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
GCAATGTCCTATTGGCTAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................ATAAAAATGAATTTA--------------------------GAGTCT..................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT--------GAATGTGGCAATTGTTG---A.............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........................................................................TCCAGCGATTGTACTTTA-----AAGTGAAAAT......................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................................................................................................................................................................................TATCAGAG-AACA--AGCAAA.............................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACCTCTGGGTGCAGG--TTG........2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................ATAAAAATGAATTTA--------------------------GAGTCTT.................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ATTCGATCCCCAAACTGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................CCCCAAACTGGAGCTTGTGGTGGA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
GCAATGTCCTATTGGCTATGCCTTCGATTCGGAAACTGGAGCTTGTGGTGGTCTCATAAGAA----------ACTCCAATGATTGTACTTTA-----AAGTAAAAATAA-AA--------------------------CAGAAAGAACTTAAAGCA--GAAATCACTTTTAATTAAGCCTCT--TGTCATGTCAT--ATA-------------------------------------AAA-TCATTAAT--------------AGCTAGAAAAT-AAAATGAATTTA--------------------------GAGTCTTATCAATG-AACA--AGCAAAA------TGAA---------CCAGCTATAAAGAA-GCCACT---GGA--TCTGT--TCGATGAG-ACAGT------TGA--AAGC-------C--AATT--------ATATGTGGAAATTGTTG---ATAGTCTTGGCCTGCCTGTTG-CC-----TGGCTAC---------CAGG--TTCAGGCGGTCSizeHit CountTotal NormTotal
No Reads
droBia1
GCAGTGTCCCATTGGATATGCCTTCGATTCGCAAACTGGAGCTTGCGGGGGTCGCATAAGAA----------ACTCCGACGACTGTGCGCTG-----AAGTAGAGGAAAGCCGACAAA-----------------AT-CA--------------CA----CACCACTTTTAATTAGGCCTCT--TGTCATGTCAA--ATA-------------------------------------AAG-TCGTT-AT--------------AGCTAGGAAAT-AAAATGAATTTG--------------------------GAGTCTTATCTGAG-AACA--AGCAAAC------CGAAGCGTATTT-CCACCTATAAAGAA-GGCTCT----GA--TCTGG--GCGATGAG-GCAGT------AT---AAGC-------C--TATT--------AAATGTGGCAATTGTTG---ATATTCCTGGCCTGCCTGCTG-CC-----TGGCCAC---------CAGG--TGCGGGCGGTTSizeHit CountTotal NormTotal
No Reads
droTak1
GCAATGTCCTATCGGCTATGCCTTCGATTCTCAAACTGGAGCTTGCGGTGGTCGCATAAGAA----------ACTCCAACGATTGTACGCTG-----AAGTAAAA---------------------------------------------------------------TTAATTAAGCCTCT--TGTCATGTCAAAAATA-------------------------------------AAA-TCATT-AT--------------AGCTAGAAAAT-AAAATGAATTTA--------------------------CCGTCTTATCACTG-AACA--AGCTAAA------CGAACCGTATTTCCCACCTATAAAGAA-GGCTCT----GA--TCTGC--GCGATGAG-TTAGT------TGA--AAGG-------T--TATTATTTCCAGATATGTGGCAATTTTTG---ATAGTCTTGGCCTGCCTGTTG-CC-----TGGCCAC---------CAGG--TGCAGTCGGTTSizeHit CountTotal NormTotal
No Reads
droEle1
ACAATGTCCTATTGGCTATGTCTTCGATTCGGAGAGTGGAGCTTGTGGTGGTCGTAAACGAG----------ATTCGGCCGATTGTACGATG-----AAATAAAAAG-T-------T-AATAAGCTAAAAAAACAAA-AG--------------AA----GAAATCATTCAATTAGGCTTCT--TGTCATGTCAA--CTA------------------------------------------------A--------------AGCTAGAAAAT-AAAATTAACCAA--------------------------GAGTCTTATCAGAT-AACA--AGCGAAACAGTAATGAACAGTATTT-GCACCTATAAAGAA-GGCTCT----GA--TCCGC--GAGATGAG-ACAGT------CGA--AACA-------GTCTA-----------TATGTGGCAGTTGTTG---ATTGTCTTTGGCTGCCTGTTA-CC-----TGTAAAT---------CAGG--TACGGGCGGATSizeHit CountTotal NormTotal
No Reads
droRho1
GCAATGTCCCATTGGATACGTCTTCGACACCGAAACTGGGGCATGTGGTCGTC---AGCGAG----------CTTCTGCCGATTGTACGTTA-----AAATAAAAGG-C-------T-A----------------A-ACA--------------------G-AACCAATTAATTAAGCCTCT--TGTCGTGTCAA--ATA-------------------------------------AAA-TCATT-AT--------------AGCTAGAAAAT-AAAATGAATTTA--------------------------GCGTCTTATCAGAG-AACA--AGCAATC------CGAACAGAATTT-CCACCTATAAAGAA-GGCTCT----GA--TCCGC--GAGATGAG-ACAGT------TGA--AAGT-------C--TAT-----------ATGTGGCAGTTGTTG---ATAGTCTTTGGCTGCCTGTTG-CC-----TGGATAT---------CAGG--TGCGGGCGGTTSizeHit CountTotal NormTotal
No Reads
droFic1
GCAATGTCCTATTGGCTACGCCTTCGATCCCGAAACTGGAGCTTGTGGTGGCCGCATACGCA----------GCTCAGACGATTGTATTTTG-----AAATAAGAAA-T-------T-AAT-AAAA----AAAGAA-------------------AAAACAAACACTTTTAATTAAGCCCCT--TGTCGTGTCAA--ATA-------------------------------------AAA--------T--------------AGCTGGAAAAT-CAAACGAATTTT--------------------------GTGTCTTATCGAAG-TACA--AGCAAAG------TGTTGCGTATTTTTTAGCTATAAAGTA-GGTTCT----GA--TCTCT--CGGATGAG-ACAGT------TGA--AAGC-------T--TGTT--------TTATGTGGCGGTTGTTG---ATATTGCTGGCCTGCCTGTTA-CC-----TCATTGT---------CAGG--TGCAGGCGGCCSizeHit CountTotal NormTotal
No Reads
droKik1
GCAATGTCCCTTTGGATATGCATTTGACGCCGAAACTGGAGCATGTGGTGGCCTTATACGGA----------ACAGCGTCAACTGTACAATG-----AGGTGAAGAG-C-------T-AAA-AACA-------------AGAAACA----AATGAAAAAAAAGAACTTTTAATTAAGCCCCTTGTGTCATGTCAA--ATA-------------------------------------AAA-TCATT-AT--------------AGCTAGAAAAT-AAACTGAATTAAG--------------------AG--AGAGTCTTATCGCAA-AAACCAAGCAAAA------CGAA---------CCACCTATAAAGAA-GGCTCT----GA--TCGGG--AAGATGGG-ACAGT------TGA--AAGC-------C--TAT-----------ATGTGGCAGCTATTG---ATTGTGTTCGCCTGCCTGTCA-CC-----TGGCTACCAC------CAGG--TGCAGGCGGTTSizeHit CountTotal NormTotal
No Reads
droAna3
GCAGTGTCCCATAGGATATGCCTTCAATGGCGATACCGGAGCATGTGGGGGACGCCTTCAAA----------ATTTCGTTGACTGTACGCTA-----AAGTGAAAACAA-TATATATT-----------------A-ACT------------------GAAATCACTTTTAATTAAGCCTCTATTGTCATGTCAA--ATT-------------------------------------AATTTCATT-AA--------------AGCTAGAAAAT-AAACTGAATTTA--------------------------GAGTCTTATCAGCG-AACA--AGCACGA------GGAGTCATAGTC-CCACCTATAAAGACTGCCACT----GA--TCCGA--GAGAGGAAAACAGT------CGA--AAGC-------C--TAT---------ATATGTGGCAG---TTG---ATACTTCTGGCCTGCCTGCTG-CC-----TGGCCTC---------CAGG--TGCGGGCAGCCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
......................................................................................................................................................................................ATTGTCATGTCAA--ATT-------------------------------------AATTTC..............................................................................................................................................................................................................................................................................................2211.001010000
...............................GATACCGGAGCATGTGGGG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.......................................................................................................................................A-ACT------------------GAAATCACTTTTAATTAAGCCTCT...........................................................................................................................................................................................................................................................................................................................................................2811.001010000
...............................................................................................................................................................................................................................................TTTCATT-AA--------------AGCTAGAAAAT-AAAC..........................................................................................................................................................................................................................................................2411.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---TTG---ATACTTCTGGCCTGC...............................................2011.001010000
.................................................................................................................................................................ATCACTTTTAATTAAGCCT.............................................................................................................................................................................................................................................................................................................................................................1911.001010000
.....................................................................................................GAAAACAA-TATATATT-----------------A-ACT------------------GAAATCACT..........................................................................................................................................................................................................................................................................................................................................................................2911.001010000
..........................................................CAAA----------ATTTCGTTGACTGTACGCTA-----AAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001010000
.............................................................A----------ATTTCGTTGACTGTACGCTA-----AAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001001000
..............................................................................................................................................................................................................................................................................AAAT-AAACTGAATTTA--------------------------GAGC....................................................................................................................................................................................................................2011.001010000
.......................................................CTTCAAA----------ATTTCGTTGACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001010000
.........................................................................................................................................ACT------------------GAAATCACTTTTAATTAAGCCT.............................................................................................................................................................................................................................................................................................................................................................2511.001010000
.............................GCGATACCGGAGCATGTGGGGGACGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
..............................................................................................................................................................................................................................................................................AAAT-AAACTGAATTTA--------------------------GA......................................................................................................................................................................................................................1811.001010000
.........................................................TCAAA----------ATTTCGTTGACTGTACGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
.............................................................................GTTGACTGTACGCTA-----AAGTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000
.....GTCCCATAGGATATGCCTTCAAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000
....................................................CGCCTTCAAA----------ATTTCGTTGACC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
....................................................................................................................................................................................CTATTGTCATGTCAA--ATT-------------------------------------AATTTCATT-..........................................................................................................................................................................................................................................................................................2711.001010000
..............................................................................................................TATATATT-----------------A-ACT------------------GAAATC.............................................................................................................................................................................................................................................................................................................................................................................1811.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................GT------CGA--AAGC-------C--TAT---------ATATGTGGCA........................................................................2311.001001000
.......................................................................................................................................................................TTTAATTAAGCCTCTATTGTC.....................................................................................................................................................................................................................................................................................................................................................2111.001010000
...................................................ACGCCTTCAAA----------ATTTCGTTGACTGTAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
..............................................................................................................................................................GAAATCACTTTTAATTAAGCCT.............................................................................................................................................................................................................................................................................................................................................................2211.001010000
..............................................................................................................TATATATT-----------------A-ACT------------------GAAATCACC..........................................................................................................................................................................................................................................................................................................................................................................2111.001010000
...............................GATACCGGAGCATGTGGGGGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG---TTG---ATACTTCTGGCCTGCCTG............................................2311.001010000
.................ATGCCTTCAATGGCGATACCGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
...............................GATACCGGAGCATGTGGGGGACGCC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.......................................................................................................AAACAA-TATATATT-----------------A-ACT------------------GAAATCACT..........................................................................................................................................................................................................................................................................................................................................................................2711.001010000
......................................................................................................................................................................TTTTAATTAAGCCTCTATT........................................................................................................................................................................................................................................................................................................................................................1911.001010000
..........................................................CAAA----------ATTTCGTTGACTGTACGCTA-----................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
..................TGCCTTCAATGGCGATACCGGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001010000
...............................................................................................................ATATATT-----------------A-ACT------------------GAAATCACT..........................................................................................................................................................................................................................................................................................................................................................................2011.001010000
.................ATGCCTTCAATGGCGATACCGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001010000
droBip1
GCAGTGTCCTATCGGATATGCCTTCAATGGTGACACCGGAGCATGTGGTGGAAGGCTTCAAA----------ATTTTGTCGATTGTACGCTG-----AAGTGAAAATAA-TGTATATA-----------------A-ACT------------------GAAATCACTTTTAATTAAGCCTCTATTGTCGTGTCAA--ATT-------------------------------------AATTTCATT-AA--------------AGCTAGAAAAT-AAAAAGAATTTA--------------------------GAGTCTTATCAGCG-AACA--AGCTAGA------CGAGTCATAGTC-CCACCTATAAAGACCGGCCCT----GA--TCCGA--AAGATGAAAACAGT------CGA--AAGC-------C--TAT---------ATATGTGGCAG---TTG---ATACTTCTGGCCTGCCTGCTG-CC-----TGGCCTC---------CAGG--TGCGGGCAGCASizeHit CountTotal NormTotal
No Reads
dp5
GCAGTGTCCCATTGGATATGCATTCAACGCTACGACTGGAGCTTGTGGCGGACGTACACGGA----------GCTCCATGGACTGTACTGTACGCTGAAGTAGTGA--------------G-AGCT------------------------AAAGTAGAGAAAACATTTTTAATTA-GCCCCG--TGTCTTGTCAA--ATA-------------------------------------AAA-TCAAT-TT--------------AGCTAGCAAAT-AAATTGAGCTTAT--------------------AGCCAGAGCCTTATCTCATTGACG--AGCGAAC------CGAAGCGAACTC-CCACCTATAAAGGA-GGCCCT----GA--CCTGG--AAGATGGGAACAGT------TGA--AAGC-------C--TAT-----------ATGTGGAAGTTGTTG---TTACTCTTTGGCTGCCTGCTG-CC-----TGGCCAT---------CAGG--TGGGGGCGGCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..............GATATGCATTCAACGCTACGACTGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2813.0030010000002
.....................ATTCAACGCTACGACTGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030110100000
...............ATATGCATTCAACGCTACGACTGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.0020020000000
...........................................TGTGGCGGACGTACACGGA----------GCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020010100000
...................GCATTCAACGCTACGACTGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000002
..............................................GGCGGACGTACACGGA----------GCTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020020000000
.......................................................ACACGGA----------GCTCCATGGACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
........................................................................................................................................................................................................................................................T--------------AGCTAGCAAAT-AAATTGAG......................................................................................................................................................................................................................................................2011.0010000100000
....................................................................................GTACTGTACGCTGAAGTAGTGA--------------G-A......................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000001
.....GTCCCATTGGATATGCATTCAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................C--TAT-----------ATGTGGAAGTTGTTG---TTACT.........................................................2411.0010010000000
........................................................................................TGTACGCTGAAGTAGTGA--------------G-AGCT------------------------AAA........................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100000
...........................................................................................................................GCT------------------------AAAGTAGAGAAAACATTTTTAATT...................................................................................................................................................................................................................................................................................................................................................................2711.0010010000000
.................................GACTGGAGCTTGTGGCGGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
.....................ATTCAACGCTACGACTGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000001
........................CAACGCTACGACTGGAGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010000000
.............................................................................................GCTGAAGTAGTGA--------------G-AGCT------------------------AAAGTAGAGA.................................................................................................................................................................................................................................................................................................................................................................................2811.0010010000000
........................................GCTTGTGGCGGACGTACACGGA----------GCTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010000000
..............................................................................................................................................................GAAAACATTTTTAATTA-GCCCCG--TGC......................................................................................................................................................................................................................................................................................................................................................2611.0010010000000
..............GATATGCATTCAACGCTACGACTGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCCAT---------CAGG--TGGGGGCGGC.2111.0010000000001
................................CGACTGGAGCTTGTGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000000001
........................................................CACGGA----------GCTCCATGGACTG............................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000100000
...........................................................................................................................GCT------------------------AAAGTAGAGAAAACATTTTT.......................................................................................................................................................................................................................................................................................................................................................................2311.0010000100000
..............................TACGACTGGAGCTTGTGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000001
.....................................................................................................AGTGA--------------G-AGCT------------------------AAAGTAGA...................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100000
.......................................................................................................................................................................................................A-------------------------------------AAA-TCAAT-TT--------------AGCTAGCAA.................................................................................................................................................................................................................................................................2011.0010100000000
.................ATGCATTCAACGCTACGACTGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000001
.......................................................................................................................................................................................................A-------------------------------------AAA-TCAAT-TT--------------AGCTAGCAAAT-AAATTGA.......................................................................................................................................................................................................................................................2911.0010010000000
..........................................TTGTGGCGGACGTACACGGA----------GCTC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
....................................................................................GTACTGTACGCTGAAGTAGTGA--------------G-.......................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
....................................................................................................................................................................ATTTTTAATTA-GCCCCG--TGTCTTGTC................................................................................................................................................................................................................................................................................................................................................2611.0010010000000
....................................................................................................................................................................ATTTTTAATTA-GCCCCG--TGTCT....................................................................................................................................................................................................................................................................................................................................................2211.0010000100000
.........................................................................................................................................................................................GTCTTGTCAA--ATA-------------------------------------AAA-TCAAT-T.........................................................................................................................................................................................................................................................................................2211.0010010000000
...........................................TGTGGCGGACGTACACGGA----------GC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010000000
................................CGACTGGAGCTTGTGGCG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000100000
..............................TACGACTGGAGCTTGTGGCGGAC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100000
..............................................................................................................................................................GAAAACATTTTTAATTA-GCCCCG--T........................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
...........................................................GGA----------GCTCCATGGACTGTACTGT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100000
........................................................................GCTCCATGGACTGTACTGTACG...................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100000000
.......................................AGCTTGTGGCGGACGTACACGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100000
...........................................................................................................................................................................................CTTGTCAA--ATA-------------------------------------AAA-TCAAT-..........................................................................................................................................................................................................................................................................................1911.0010010000000
.................ATGCATTCAACGCTACGACTGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100000
.......................................................................................................................................................................................................................................................TT--------------AGCTAGCAAAT-AAATTGA.......................................................................................................................................................................................................................................................2011.0010010000000
....................................................................................GTACTGTACGCTGAAGTAGTGA--------------G-AGC....................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000001
.............................................................................ATGGACTGTACTGTACGCTGAAGT............................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100000
....................................................................................GTACTGTACGCTGAAGTAGTGA--------------T-.......................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100000
..............GATATGCATTCAACGCTACGACTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010010000000
...............ATATGCATTCAACGCTACGACTGGAGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010010000000
...................GCATTCAACGCTACGACTGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
.............................CTACGACTGGAGCTTGTGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
...........................................................................................................................GCT------------------------AAAGTAGAGAAAACATT..........................................................................................................................................................................................................................................................................................................................................................................2011.0010000100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGGAAGTTGTTG---TTACT.........................................................2011.0010100000000
................................................CGGACGTACACGGA----------GCTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000001
...............................................................................................................................................................................................................................................A-TCAAT-TT--------------AGCTAGCAAAT-..............................................................................................................................................................................................................................................................1911.0010010000000
...................................................................................................................................................................................................................................................AAT-TT--------------AGCTAGCAAAT-AAATTGAGC.....................................................................................................................................................................................................................................................2511.0010010000000
............................................................................................................................................................................................................................................................................GCAAAT-AAATTGAGCTTAT--------------------.............................................................................................................................................................................................................................1911.0010010000000
...........................................................GGA----------GCTCCATGGACTGTACTGTACGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000001
...........................................................................................ACGCTGAAGTAGTGA--------------G-AGCT------------------------AAA........................................................................................................................................................................................................................................................................................................................................................................................2311.0010000100000
............................................................................................CGCTGAAGTAGTGA--------------G-AGCT------------------------AAA........................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100000
........................................................................................................................................................................................................................................................T--------------AGCTAGCAAAT-AAATTGAGC.....................................................................................................................................................................................................................................................2111.0010000100000
................................................................................................................................................................AAACATTTTTAATTA-GCCCCG--TGTCTT...................................................................................................................................................................................................................................................................................................................................................2711.0010010000000
...............................................GCGGACGTACACGGA----------GCTCC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
................TATGCATTCAACGCTACGACTGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010000000
..............................................................................................................................................................GAAAACATTTTTAATTA-GCCCCG--TGT......................................................................................................................................................................................................................................................................................................................................................2611.0010010000000
.........................................................................................GTACGCTGAAGTAGTGA--------------G-AGCT------------------------...........................................................................................................................................................................................................................................................................................................................................................................................2211.0010010000000
.............................................................................................GCTGAAGTAGTGA--------------G-AGCT------------------------AAAGTAGAG..................................................................................................................................................................................................................................................................................................................................................................................2711.0010000100000
.........................................................................................GTACGCTGAAGTAGTGA--------------G-AGCT------------------------AAA........................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100000
droPer2
GCAGTGTCCCATTGGATATGCATTCAATGCTACGACTGGAGCTTGCGGCGGACGTACACGGA----------GCTCCATGGACTGTACTGTACGCTGAAGTAGTGA--------------G-AGCT------------------------AAAGTAGAGAAAACATTTTTAATTA-GCCCCG--TGTCTTGTCAA--ATA-------------------------------------AAA-TCAAT-TT--------------AGCTAGCAAAT-AAATTGAGCTTAT--------------------AGCCAGAGCCTTATCTCATTGACG--AGCGAAC------CGAAGCGAACTC-CCACCTATAAAGGA-GGCCCT----GA--CCT-----------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................ACACGGA----------GCTCCATGGACTGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................24112.00121200000
........................................................CACGGA----------GCTCCATGGACTGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2316.006600000
........................................................................GCTCCATGGACTGTACTGTAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.004400000
........................................................................GCTCCATGGACTGTACTGTACGCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.004400000
.......................................................ACACGGA----------GCTCCATGGACTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2114.004400000
..........................................................................TCCATGGACTGTACTGTACG...................................................................................................................................................................................................................................................................................................................................................................................................................................................2014.004400000
.............................................................A----------GCTCCATGGACTGTACTGTACGCTGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2813.003300000
....................................................................................GTACTGTACGCTGAAGTAGTGA--------------.........................................................................................................................................................................................................................................................................................................................................................................................................................2213.003300000
....................CATTCAATGCTACGACTGGAGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.003300000
.............................................................................ATGGACTGTACTGTACGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................1913.003300000
...........................................................GGA----------GCTCCATGGACTGTACTGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2313.003300000
...............ATATGCATTCAATGCTACGACTGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002200000
.........................................................................CTCCATGGACTGTACTGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.002200000
.........................................................................CTCCATGGACTGTACTGTACGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002200000
.......................................................ACACGGA----------GCTCCATGGACTGTACTGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.002200000
.........................................................................CTCCATGGACTGTACTGTAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
....................................................................................GTACTGTACGCTGAAGTAGTG........................................................................................................................................................................................................................................................................................................................................................................................................................................2112.002200000
........................................................CACGGA----------GCTCCATGGACTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
..........................................................................TCCATGGACTGTACTGTACGCTGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002200000
........................................................................GCTCCATGGACTGTACTGTACGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
.....................................................GTACACGGA----------GCTCCATGGACTGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.002200000
.........................................................................................................................................................GTAGAGAAAACATTTTTAATTA-GCCC.............................................................................................................................................................................................................................................................................................................................................................2612.002200000
............................................................................CATGGACTGTACTGTACGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002200000
..........................................................................TCCATGGACTGTACTGTACGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002200000
......................................................TACACGGA----------GCTCCATGGACTGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.002200000
...............................................................................GGACTGTACTGTACGCTGAAGTAGTGA--------------G-.......................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
.........................AATGCTACGACTGGAGCTTGCGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
....................CATTCAATGCTACGACTGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..................................................GACGTACACGGA----------GCTCCATGGACTGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
.........................................................................CTCCATGGACTGTACTGTACGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.............................................................A----------GCTCCATGGACTGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.........................................................................CTCCATGGACTGTACTGTACGCTGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.......................TCAATGCTACGACTGGAGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
.....................ATTCAATGCTACGACTGGAGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
..................................................GACGTACACGGA----------GCTCCATGGACTGT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.......................................................ACACGGA----------GCTCCATGGACTGTACTGTAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001100000
....................CATTCAATGCTACGACTGGAGCG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
........................................................................................................................................................................................................................................................................................GAGCTTAT--------------------AGCCAGAGCCTTATCT.............................................................................................................................................................................................................2411.001001000
........................CAATGCTACGACTGGAGC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.......................................................ACACGGA----------GCTCCATGGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
...............ATATGCATTCAATGCTACGACTGGAGCTT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001100000
...........................................................GGA----------GCTCCATGGACTGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
........................................................................GCTCCATGGACTGTACTGTACGCTGAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..........................ATGCTACGACTGGAGCTTGCGGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001001000
........................................................CACGGA----------GCTCCATGGACT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
....................................................................................GTACTGTACGCTGAAGTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
.......................................................ACACGGA----------GCTCCATGGACTGTAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.........................................................................CTCCATGGACTGTACTGTACGCTGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
....................CATTCAATGCTACGACTGGAGCC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
..............................................................................................................................................................................................................................................................................................AT--------------------AGCCAGAGCCTTATCT.............................................................................................................................................................................................................1811.001001000
........................................................CACGGA----------GCTCCATGGACTGTA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
......................................................................................................................................................................TTTTAATTA-GCCCCG--TGT......................................................................................................................................................................................................................................................................................................................................................1811.001001000
..................................................GACGTACACGGA----------GCTCCATGGACTGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..........................................................................TCCATGGACTGTACTGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001100000
............................................................................................CGCTGAAGTAGTGA--------------G-AGCT------------------------AAA........................................................................................................................................................................................................................................................................................................................................................................................2211.001001000
.........................................................ACGGA----------GCTCCATGGACTGTACT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
.............................................................A----------GCTCCATGGACTGTACTGTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001100000
.....................ATTCAATGCTACGACTGGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
...........................................................GGA----------GCTCCATGGACTGTACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001100000
..........................................................................TCCATGGACTGTACTGTAC....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.......................................................ACACGGA----------GCTCCATGGACTGTACG........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
............................................................................................CGCTGAAGTAGTGA--------------G-AGCC------------------------...........................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.........................................................................................................................................................GTAGAGAAAACATTTTTAATTA-GCCCCG--T........................................................................................................................................................................................................................................................................................................................................................2911.001100000
...............................ACGACTGGAGCTTGCGGCGGACGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
...........................................................................CCATGGACTGTACTGTACGCTG................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000
........................................................................GCTCCATGGACTGTACTGTACGCTGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
..............................TACGACTGGAGCTTGCGGCGGACGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..........ATTGGATATGCATTCAATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
.............................................................A----------GCTCCATGGACTGTACTGTACGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
droWil2
ACAGTGTCCCTTCTGCTACTTATTCAATACGGACAATGGCAGCTGTACAGGCCTAATGGCAA----------A---------TTG------------------------------------------------------------------------------TTCGTTTAATTAATTTTCA--TGTTGTATCAA--ATC-------------------------------------TTT-CAGAC-AGTACGA---------TACAATACAAT-AAATTGATTTTAAAATGAAGTATTAAAGTAGCGTG--TGCATCTTATCAAAT-TGTT--AGATTT--------------TCGCT-TCACTTATAAAGCG-AGTGTT----AT--TGGGAAATCGACGCA-ACAGTTCTT--CGA--ATTT-------C---TGT--------GGATGTGGAAAGTTTTG---TTACCGCTTCTTTGCCTAATGGCA-----TGGCCGG---------CAGGATTACAGGCCGAASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.......................................................................................................................................................................................................C-------------------------------------TTT-CAGAC-AGTACGA---------TACA......................................................................................................................................................................................................................................................................2014.00400040
................................................................................................................................................................................................CAA--ATC-------------------------------------TTT-CAGAC-AGTACGA---------..........................................................................................................................................................................................................................................................................2112.00200020
..................................AATGGCAGCTGTACAGGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1812.00200020
......................................................AATGGCAA----------A---------TTG------------------------------------------------------------------------------TTCGTTTAATTAAT................................................................................................................................................................................................................................................................................................................................................................2611.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTT--CGA--ATTT-------C---TGT--------GGATGTGG..........................................................................2211.00100010
............CTGCTACTTATTCAATACT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
................................................................................................................................................................................................CAA--ATC-------------------------------------TTT-CAGAC-AGTACGA---------TA........................................................................................................................................................................................................................................................................2311.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................CTT--CGA--ATTT-------C---TGT--------GGATGTGGA.........................................................................2311.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTG---TTACCGCTTCTTTGC...............................................1911.00100010
......................................................................................................................................................................GTTTAATTAATTTTCA--TGTTGT...................................................................................................................................................................................................................................................................................................................................................2211.00100010
...............................................................................................................................................................................................TCAA--ATC-------------------------------------TTT-CAGAC-AGTACGA---------T.........................................................................................................................................................................................................................................................................2311.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTG---TTACCGCTTCTTTGCCT.............................................2111.00100010
...............CTACTTATTCAATACGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
................................................AGGCCTAATGGCAA----------A---------TTG------------------------------------------------------------------------------TTCGT.........................................................................................................................................................................................................................................................................................................................................................................2311.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................C---TGT--------GGATGTGGAAAGTTTTG---TTACC.........................................................2611.00100010
.......................................................................................................................................................................................................C-------------------------------------TTT-CAGAC-AGTACGA---------TACAAT....................................................................................................................................................................................................................................................................2211.00100010
..............................................................................................................................................................................................ATCAA--ATC-------------------------------------TTT-CAGAC-AGTACGA---------T.........................................................................................................................................................................................................................................................................2411.00100010
............................................GTACAGGCCTAATGGCAA----------A---------TTG------------------------------------------------------------------------------TTC...........................................................................................................................................................................................................................................................................................................................................................................2511.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTGGAAAGTTTTG---TTACCGCTT.....................................................2511.00100010
................................................................................................................................................................................................CAA--ATC-------------------------------------TTT-CAGAC-AGTACGA---------TACA......................................................................................................................................................................................................................................................................2511.00100010
.....................ATTCAATACGGACAATGGCAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100010
droVir3
GCAGTGCCCCATCGGCTATGCCTACAACGAGCTGGGCGGCACGTGCAGCGGACGCATCCAAGATGTGGCCGCGTGCCGTCAGCCGTGAGCTG-----AGGCGAACA----------------------------------------------------------TTTACCAATTAAGCTTTT--CGTTGTCTTTG--CTA-------------------CGTT-TTTTTT---------T-TATGT-TGTGCTGTGCAATTAACACAATTAATA-AATATGAACTAA--------------------------TCGCCTTATCGAAC-TGCG--AACTGTG------TGCGCCTC-TAA-ACGCCTATAAAGCA-GCCG-------A--CTCCG--GCTGCGGA-TCTC-------------------AACAG---TAT--------TGATGTTGAAAGTTCTAACAATTGTCATTGGCTGCCTGCTG-GCCTTGCTGGGCTC---CGGA--TCGG--TGCGGGCGGCCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
................................................................................................................................................................................................................................TTTTTT---------T-TATGT-TGTGCTGTGCA...............................................................................................................................................................................................................................................................................2312.002200000000000000000000000000000000000000000000000000000000000000
.........................................CGTGCAGCGGACGCATCCAAGAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000010000000000000000000000000000000000000000000000
........................................ACGTGCAGCGGACGCATCCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................GTT-TTTTTT---------T-TATGT-TGTGCTGT..................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
...............................................................................................................................................................................................................................................T-TATGT-TGTGCTGTGCAATTAAC.........................................................................................................................................................................................................................................................................2311.001000000000000000001000000000000000000000000000000000000000000000
.....................................................................CGCGTGCCGTCAGCCGTGAGCT......................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001100000000000000000000000000000000000000000000000000000000000000
............................GAGCTGGGCGGCACGTGCAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
..............................................................................................................................................................................................CTTTG--CTA-------------------CGTT-TTTTTT---------T-T...............................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
...................GCCTACAACGAGCTGGGCGGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000000000100000000000000000000000000000000000000000
.....................................................................CGCGTGCCGTCAGCCGTGAGCTG-----AGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
.......................................................ATCCAAGATGTGGCCGCGTGCCGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................TT--CGTTGTCTTTG--CTA-------------------CGTT-TTTTTT---------..................................................................................................................................................................................................................................................................................................2611.001000000000000000000010000000000000000000000000000000000000000000
.....................................................................................................GAACA----------------------------------------------------------TTTACCAATTAAGCTTTT--CGTT.....................................................................................................................................................................................................................................................................................................................................................2711.001100000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................TTTTT---------T-TATGT-TGTGCTGTGCAATT............................................................................................................................................................................................................................................................................2511.001010000000000000000000000000000000000000000000000000000000000000
.........................................................................................................A----------------------------------------------------------TTTACCAATTAAGCTTTT--C........................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
.......................ACAACGAGCTGGGCGGCA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000010
.........................................................CCAAGATGTGGCCGCGTGCCGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
...............CTATGCCTACAACGAGCTGGGCGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
............................................................................CGTCAGCCGTGAGCTG-----AGGCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
.....................CTACAACGAGCTGGGCGGCACGTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................AATTAAGCTTTT--CGTTGTCTTTG--CTA-------------------C.....................................................................................................................................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................TTTACCAATTAAGCTTTT--CGTT.....................................................................................................................................................................................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
.....................CTACAACGAGCTGGGCGGCAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.........................................CGTGCAGCGGACGCATCCAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
..............GCTATGCCTACAACGAGCTGGGCGGC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000010000000000000000000000000000000000000000000
...........................................................................................................................................................................ATTAAGCTTTT--CGTT.....................................................................................................................................................................................................................................................................................................................................................1530.331000000000000000000000000000000000000000000000000000000000000001
droMoj3
GCAGTGTCCCATTGGCTATGCCTACAGCGAGCAGCTCGGCACGTGCAGCGGACGCATCGCGG-----------ATCAGC-----------TG-----CCGCGAAC----------------------------------------------------------ATGTTTCAATTAAGACTCT--CA-CTTGTCAC--CTGTGGCAATTTCTCGATGCTTCTGTTGTTCTTTTAATTGGCAATTATG-AC-----AGCAATTAATACAAAATAAA-ACTGTGAGCTAA--------------------------TCACCTTATCTAAG---------------------GCACTGGGGCT-ACTACTATAAAGCA-GACGGT----GCCAGCTCG--GCTGTTAG-CCAGT------TGC--GAAACGCAATTC---GTT--------TTATGTTGCAGCTTCTT---TTGGCATTGAGCTGCCTGTGG-CC-----CTTGGAG---------TGGG--CGCAGGCGGTGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
ACAGTGTCCCATTGGTTATGCGTTCAATGAGCCAAATGGCACCTGCAGTGGACGCATCGCTG----------ACATACCGGATTGTAGGCAA-----TAA----------------------------------------------------AAAAGAACATATTTTTTTAATTAAGAACTA--TGTTGTGTTAA--ACT-------------------------------------GTA-TTGTA-AC--------------AAATA--AAAA-AATATGAGCTAA--------------------------CTGCCTTATCGTAG-TACATGAGCC----------GAA-------T-GCGCCTATAAAGCA-CACGTCTTTTGG--TGTCT--TCGCCA---ACAGTTATCGTCGA--GGCC---AAGTA---ATT--------TTATGTTGAAACTGCTA---ATTGTAATTGGCTGC----TG-TC-----TGCCGCT-----------CA--ATCAGGCGGCASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 10:57 PM