ID:

der_764

 Coordinate:

scaffold_4784:8822304-8822364 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-3.5 -3.4 -3.3

Flybase annnotation

exon [dere_GLEANR_14290:1]; CDS [Dere\GG14086-cds]; CDS [Dere\GG14086-cds]; exon [dere_GLEANR_14290:2]; intron [Dere\GG14086-in]

No Repeatable elements found

mature
  1. der_764  scaffold_4784:8822304-8822330 -
  2. der_765  scaffold_4784:8824972-8824998 -
star

Sense Strand Reads

##################################################-------------------------------------------------------------##################################################
GTAATCCTGCGGTCCGATTCTGAAGTTAATCCCGATAGTTTCAAATTTGCGTAAGTTGACTATGAGATATGACCAAAAAGGATGTTGTGCTGACTTTGAGTTCCCTTCTAGCTGGGAGACTTCCGATGGACAGTCAGCCAATGCCGAGGGTCATCTGAATA
**************************************************..(((..((((..(((.((((((..........))))))....)))..))))..)))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total V040
embryo
 M057
embryo
 M055
female body
 V108
head
....................................................................................TTGTGCTGACTTTGAGTTCCCTTCTAG.................................................. 27 0 2 23.00 46 33 4 5 4
.....................................................................................TGTGCTGACTTTGAGTTCCCTTCTAG.................................................. 26 0 2 12.50 25 21 3 1 0
....................................................................................................................................GTCAGCCAATGCCGAGGGT.......... 19 0 2 3.50 7 6 1 0 0
................................................................................................................................GACAGTCAGCCAATGCCGAGGGT.......... 23 0 2 2.50 5 4 1 0 0
....................................................................................................................................GTCAGCCAATGCCGAGGGTC......... 20 0 2 2.50 5 3 2 0 0
........................................................................................................................TTCCGATGGACAGTCAGCC...................... 19 0 2 2.00 4 3 1 0 0
............................................................................................................................GATGGACAGTCAGCCAAT................... 18 0 2 2.00 4 4 0 0 0
.......................................................................................................................CTTCCGATGGACAGTCAGCC...................... 20 0 2 2.00 4 2 2 0 0
GTAATCCTGCGGTCCGATTCTGAA......................................................................................................................................... 24 0 1 2.00 2 0 2 0 0
............................................................................................................................GATGGACAGTCAGCCAATGCCGAGG............ 25 0 2 2.00 4 0 4 0 0
................................................................................................................................GACAGTCAGCCAATGCCGAGGGTC......... 24 0 2 2.00 4 3 1 0 0
............................................................................................................................GATGGACAGTCAGCCAATGCC................ 21 0 2 1.50 3 1 2 0 0
...........................................................................................................................CGATGGACAGTCAGCCAAT................... 19 0 2 1.50 3 3 0 0 0
............................................................................................................................GATGGACAGTCAGCCAATGCCGAGGGT.......... 27 0 2 1.50 3 2 1 0 0
................ATTCTGAAGTTAATCCCGATAGT.......................................................................................................................... 23 0 1 1.00 1 0 1 0 0
.........CGGTCCGATTCTGAAGTTAATCCC................................................................................................................................ 24 0 1 1.00 1 0 1 0 0
...................................................................................GTTGTGCTGACTTTGAGTTCCCTTCTAG.................................................. 28 0 2 1.00 2 1 1 0 0
..................................................................................................................................CAGTCAGCCAATGCCGAGGGT.......... 21 0 2 1.00 2 2 0 0 0
...............................................................................................................................GGACAGTCAGCCAATGCCGAGGGTC......... 25 0 2 1.00 2 1 1 0 0
..........GTTCCGATTCTGAAGTTAATCCC................................................................................................................................ 23 1 1 1.00 1 0 1 0 0
...............GATTCTGAAGTTAATCCCGATAGTTT........................................................................................................................ 26 0 1 1.00 1 0 1 0 0
...............GATTCTGAAGTTAATCCCGATAGC.......................................................................................................................... 24 1 1 1.00 1 0 1 0 0
........................GTTAATCCCGATAGTTTCAAATT.................................................................................................................. 23 0 1 1.00 1 0 1 0 0
.........................TTAATCCCGATAGTTTCAAATT.................................................................................................................. 22 0 1 1.00 1 1 0 0 0
..........GGGCCGATTCTGAAGTTAATCCCGAT............................................................................................................................. 26 1 1 1.00 1 1 0 0 0
..........GGTCCGATTCTGAAGTTAATCCCGA.............................................................................................................................. 25 0 1 1.00 1 1 0 0 0
GGAATCCTGCGGTCCGATTC............................................................................................................................................. 20 1 1 1.00 1 0 1 0 0
..........GGTCCGATTCTGAAGTTAATTCCGAT............................................................................................................................. 26 1 1 1.00 1 1 0 0 0
..........GGTCCGATTCTGAAGTTAATCCCGATA............................................................................................................................ 27 0 1 1.00 1 1 0 0 0
.....................................................................................TTTGCTGACTTTGAGTTCCCTTCTAG.................................................. 26 1 2 1.00 2 0 2 0 0
GTAATCCTGCGGTCCGATTCTGAAGT....................................................................................................................................... 26 0 1 1.00 1 1 0 0 0
..............CGATTCTGAAGTTAATCCCGATA............................................................................................................................ 23 0 1 1.00 1 0 1 0 0
....................................................................................TTGTGCTGACTTTGAGTTCCCTTCTAT.................................................. 27 1 2 1.00 2 2 0 0 0
.........................................................................................................................TCCGATGGACAGTCAGCCA..................... 19 0 2 1.00 2 2 0 0 0
GTAATCCTGCGGTCCGATTCTGA.......................................................................................................................................... 23 0 1 1.00 1 0 1 0 0
...................................................................................................................................AGTCAGCCAATGCCGAGGGTC......... 21 0 2 1.00 2 1 1 0 0
...................................................................................................................................AGTCAGCCAATGCCGAGG............ 18 0 2 1.00 2 0 2 0 0
GTAATCCTGCGGTCCGATT.............................................................................................................................................. 19 0 1 1.00 1 1 0 0 0
........................GTTAATCCCGATAGTTTC....................................................................................................................... 18 0 1 1.00 1 1 0 0 0
..........................................................................................................TATGCCTGGGAGACTTCCGATGG................................ 23 3 2 1.00 2 1 1 0 0
.............................................................................................................................ATGGACAGTCAGCCAATGCCGAG............. 23 0 2 1.00 2 2 0 0 0
........................................................................................................................TTCCGATGGACAGTCAGCCA..................... 20 0 2 1.00 2 2 0 0 0
................................................................................................................................GACAGTCAGCCAATGCCGAGG............ 21 0 2 1.00 2 0 2 0 0
................................................................................................................................GACAGTCAGCCAATCCCGAGGGT.......... 23 1 2 0.50 1 1 0 0 0
....................................................................................TTGTGCTGACTTTGAGTTCCCTCCTAG.................................................. 27 1 2 0.50 1 0 1 0 0
................................................................................................................................GACAGTCAGCCAATGCCGAGC............ 21 1 2 0.50 1 0 1 0 0
.......................................................................................................................CTTCCGATGGACAGTCAGCCAAT................... 23 0 2 0.50 1 1 0 0 0
........................................................................................................................CTCCGATGGACAGTCAGCCA..................... 20 1 2 0.50 1 1 0 0 0
....................................................................................................................................GTAAGCCAATGCCGAGGGTCATC...... 23 1 2 0.50 1 0 1 0 0
............................................................................................................TGCCTGGGAGACTTCCAATGGACA............................. 24 3 2 0.50 1 1 0 0 0
.....................................................................................TGTGCTGACTTTTAGTTCCC........................................................ 20 1 2 0.50 1 1 0 0 0
........................................................................................................................TTCTGATGGACAGTCAGCC...................... 19 1 2 0.50 1 0 1 0 0
............................................................................................................TGCCTGGGAGACTTCCGATG................................. 20 2 2 0.50 1 0 1 0 0
...............................................................................................................CTGGGAGACTTCCGCTGGACA............................. 21 1 2 0.50 1 1 0 0 0
......................................................................................................................ACTTCCGATGGACAGTCAGC....................... 20 0 2 0.50 1 1 0 0 0
............................................................................................................TGCCTGGGAGACTTCCGATGGAC.............................. 23 2 2 0.50 1 1 0 0 0
....................................................................................TGGTGCTGACTTTGAGTTCCCTTCTAG.................................................. 27 1 2 0.50 1 0 1 0 0
.......................................................................................................................CTTCCGATGGACAGTCAGCCAATGCC................ 26 0 2 0.50 1 0 1 0 0
.....................................................................................TGAGCTGACCTTGAGCTCCCTTCTAG.................................................. 26 3 2 0.50 1 1 0 0 0
.......................................................................................................................................AGCCAATGACGAGGGTCATCT..... 21 1 2 0.50 1 1 0 0 0
.....................................................................................TGTGCTGACTTTCAGTTCCCTTCTAG.................................................. 26 1 2 0.50 1 1 0 0 0
.....................................................................................TGTGCTGACTTTTACTTCCCTTCTAG.................................................. 26 2 2 0.50 1 1 0 0 0
....................................................................................TTGTGCTGACTTTGAGTTCCCTTCTCG.................................................. 27 1 2 0.50 1 1 0 0 0
.......................................................................................................................CTTCCGATGGACAGTCAGCCAATGC................. 25 0 2 0.50 1 0 1 0 0
....................................................................................TTGTGCTGACTTTGAGTTCCCTTC..................................................... 24 0 2 0.50 1 1 0 0 0
...........................................................................................................................................AATGCCGAGGGTCATCTGAATA 22 0 2 0.50 1 0 1 0 0
............................................................................................................................GATGGACAGTCAGCCAATGCCGAGGGTC......... 28 0 2 0.50 1 0 1 0 0
..................................................................................................................................CAGTCAGCCAATGCCGAGGGTCAT....... 24 0 2 0.50 1 0 1 0 0
...............................................................................................................................GGACAGTCAGCCAATGCCGAGG............ 22 0 2 0.50 1 0 1 0 0
.....................................................................................TGTGCTGACTTTGCGTTCCCTTCTAG.................................................. 26 1 2 0.50 1 1 0 0 0
................................................................................................................................GACAGTCAGCCCATGCCCAGGGTC......... 24 2 2 0.50 1 1 0 0 0
...............................................................................................................CTGGGAGACTTCCGATGGA............................... 19 0 2 0.50 1 1 0 0 0
....................................................................................TTGTGCTGACTTTGAGTTCACTTCTAG.................................................. 27 1 2 0.50 1 0 0 0 1
.......................................................................................................................CTTCCGATGGCCAGTCAGC....................... 19 1 2 0.50 1 0 1 0 0
......................................................................................................................................CAGCCAATGCCGAGGGTCAT....... 20 0 2 0.50 1 0 1 0 0
...........................................................................................................................CGATTGACAGTCAGCCAA.................... 18 1 2 0.50 1 1 0 0 0
....................................................................................................................................GTCAGCCAATGCCGAGGGGC......... 20 1 2 0.50 1 1 0 0 0
............................................................................................................................GATGGACAGTCAGCCAATGCCGAG............. 24 0 2 0.50 1 0 1 0 0
..........................................................................................................TTTGCCTGGGAGACTTCCGATGGAC.............................. 25 3 2 0.50 1 0 1 0 0
............................................................................................................TTCCTGGGAGACTTCCGATGGA............................... 22 2 2 0.50 1 0 1 0 0
...............................................................................................................CTGGGAGACTTCCGATGGAC.............................. 20 0 2 0.50 1 1 0 0 0
....................................................................................CTGTGCTGACTTTGAGTTCCCTTCTAG.................................................. 27 1 2 0.50 1 1 0 0 0
.................................................................................................................................ACAGTCAGCCAATGCCGAGGGTC......... 23 0 2 0.50 1 0 1 0 0
.........................................................................................................................TCCGATGGACAGTCAGCCAATGCC................ 24 0 2 0.50 1 0 1 0 0
.....................................................................................TGAGCTGACTTTGAGTTCCCTTCTCG.................................................. 26 2 2 0.50 1 1 0 0 0
......................................................................................................................................CAGCCAATGCCGAGGGTC......... 18 0 2 0.50 1 0 1 0 0
......................................................................GACCAAAAAGGATGTTGTGC....................................................................... 20 0 2 0.50 1 0 1 0 0
........................................................................................................................TTCCGATGGACAGTCAGCCAAT................... 22 0 2 0.50 1 1 0 0 0
....................................................................................TTGTGCGGACTTTGAGTTCCCTTCTCA.................................................. 27 3 2 0.50 1 1 0 0 0
....................................................................................TTGTGCTGACTTTGAGCTCCCTTCTCG.................................................. 27 2 2 0.50 1 1 0 0 0
..................................................................................................................GGAGTCTTCCGATGGACAGT........................... 20 1 2 0.50 1 1 0 0 0
................................................................................................................................GACTGTCAGCCAATGCCGAGGGT.......... 23 1 2 0.50 1 0 1 0 0
....................................................................................GTGGGCTGACTTTGAGGTCCCTTCTAG.................................................. 27 3 2 0.50 1 1 0 0 0
...................................................................................................................GAGACTTCCGATGGACAG............................ 18 0 2 0.50 1 0 1 0 0
.......................................................................................................................CTTCCGATGGACACTCAGCCA..................... 21 1 2 0.50 1 1 0 0 0
..............................................................................................................CCTGGGAGACTTCCGATGGAC.............................. 21 1 2 0.50 1 0 1 0 0
...........................................................................................................................................AATGCCGAGGGTCATCTGAAT. 21 0 2 0.50 1 1 0 0 0
......................................................................................GTGCTGACTTTGAGTTCCCTTCTAG.................................................. 25 0 2 0.50 1 0 0 1 0
.................................................................................................................................ACAGTCAGCCAATGCCGAGGGC.......... 22 1 2 0.50 1 0 1 0 0
.............................................................................................................GCCTGGGAGACTTCCGATGGAC.............................. 22 2 2 0.50 1 0 1 0 0
...........................................................................................................ATGCCTGGGAGACTTCCGATGGACAGT........................... 27 3 2 0.50 1 1 0 0 0
........................................................................................................................................GCCTATGCCGAGGGTCATCTG.... 21 1 2 0.50 1 0 1 0 0
................................................................................................................................GACAGTCAGCCAACGCCGAGGGTC......... 24 1 2 0.50 1 1 0 0 0
.............................................................................................................AGCTGGGAGACTTCCGATGG................................ 20 0 2 0.50 1 1 0 0 0
.....................................................................................................................GACTTCCGATGGACAGTCAGC....................... 21 0 2 0.50 1 0 1 0 0
...............................................................................................................CGGGGAGACTTCCGATGGACAGTCAGCC...................... 28 1 2 0.50 1 0 1 0 0
.....................................................................................TGTGCTGACTTTTAGTTCCCTTCTAT.................................................. 26 2 2 0.50 1 1 0 0 0
.............................................................................................................................ATGGACAGTCAACCCATGCCGAG............. 23 2 2 0.50 1 1 0 0 0
....................................................................................TTGTGCTGACTTTGATTTCCCTTCTAG.................................................. 27 1 2 0.50 1 1 0 0 0
........................................................................................................................TTCCGATGGACATTCATCCAATA.................. 23 3 2 0.50 1 1 0 0 0
....................................................................................TTGTGCTCCCTTTGAGCTCCCTTCTAG.................................................. 27 3 2 0.50 1 1 0 0 0
................................................................................................................TGGGAGACTTCCGATGGACAGT........................... 22 0 2 0.50 1 0 1 0 0
...........................................................................................................................CGATGGACAGTCAGCCAA.................... 18 0 2 0.50 1 1 0 0 0
......................................................................................GTGCTGACTTTGGGTTCCCT....................................................... 20 1 2 0.50 1 1 0 0 0
....................................................................................TTGTGCTGACTTTGAGTTCTCTTCTAG.................................................. 27 1 2 0.50 1 1 0 0 0
............................................................................................................................GATGGACAGCCAGCCAATGCCGAC............. 24 2 2 0.50 1 0 1 0 0
....................................................................................TTGCGCTGACTTTGAGTTCCCTTCTAG.................................................. 27 1 2 0.50 1 1 0 0 0
...................................................................................GATGAGCTGACTTTGAGTTCCCTTCTAG.................................................. 28 2 2 0.50 1 1 0 0 0
.......................................................................................................................CTTCCTATGGACAGTCAGCCAATGC................. 25 1 2 0.50 1 0 1 0 0
..............................................................................................................................................GCCGAGGGTCATCTGAATA 19 0 2 0.50 1 1 0 0 0
..................................................................................................................................CACTCAGCCAATGCCGAGGGTCAT....... 24 1 2 0.50 1 0 1 0 0
................................................................................................................................GGCAGTCAGCCAATGCCGAGGGTC......... 24 1 2 0.50 1 0 1 0 0
.......................................................................................................................CTTCCTATGGACAGCCAGCCAA.................... 22 2 2 0.50 1 1 0 0 0
..............................................................................................................CCTGGGAGACTTCCGATG................................. 18 1 2 0.50 1 0 1 0 0
...........................................................................................................................................AAAGCCGAGGGTCATCTGAA.. 20 1 2 0.50 1 1 0 0 0
....................................................................................................................................GGCAGCCAATGCCGAGGGTC......... 20 1 2 0.50 1 0 1 0 0
...........................................................................................................ATGCCTGGGAGACTTCCGAT.................................. 20 3 2 0.50 1 1 0 0 0
............................................................................................................................................ATGCCGAGGGTCATCTGA... 18 0 2 0.50 1 0 0 1 0
....................................................................................TTGTGCTGACTTTGAGTTCCCTTCTA................................................... 26 0 2 0.50 1 1 0 0 0
.............................................................................................................GCCTGGGAGACTTCCGATGGACAGTCA......................... 27 2 2 0.50 1 1 0 0 0
.......................................................................................................................CTTTCGATGGACAGTCAGCCAATGCCGA.............. 28 1 2 0.50 1 0 1 0 0
.......................................................................................................................CTTCCGATGGACAGTCAGC....................... 19 0 2 0.50 1 0 1 0 0
..........................................................................................................................CCGATGGACAGTCAGCCAATGCCGAGG............ 27 0 2 0.50 1 0 1 0 0
..........................................................................................................................................CAATGCCGAGGGTCATCTGA... 20 0 2 0.50 1 1 0 0 0
.....................................................................................TGGGCTGACTTTGAGTTCCCTTCTAG.................................................. 26 1 2 0.50 1 1 0 0 0
............................................................................................................TGCCTGGGAGACTTCCGATGTA............................... 22 3 2 0.50 1 1 0 0 0
..........................................................................................................................CCGATGGACAGTCAGCCAATGCC................ 23 0 2 0.50 1 0 1 0 0
........................................................................................................................TTCCGATGGACAGTCAGCCAA.................... 21 0 2 0.50 1 1 0 0 0
.....................................................................................TGGGCTAACTTTGAGTTCCCTTCTAG.................................................. 26 2 2 0.50 1 1 0 0 0
............................................................................................................................................ATGCCGAGGGTCATCTGAATA 21 0 2 0.50 1 1 0 0 0
....................................................................................TTGTGCTCACTTTGAGTTCCCTTCTAG.................................................. 27 1 2 0.50 1 1 0 0 0
...................................................................................................................................AGTCAGCCAATGCCGAGGGC.......... 20 1 3 0.33 1 0 1 0 0
.......................................................................................................................CTTCCTATGGACAGTCATC....................... 19 2 4 0.25 1 0 1 0 0
...............................................................................................................................GAACAGTCACCCAATACCG............... 19 3 13 0.15 2 0 0 0 2

Anti-sense strand reads

CATTAGGACGCCAGGCTAAGACTTCAATTAGGGCTATCAAAGTTTAAACGCATTCAACTGATACTCTATACTGGTTTTTCCTACAACACGACTGAAACTCAAGGGAAGATCGACCCTCTGAAGGCTACCTGTCAGTCGGTTACGGCTCCCAGTAGACTTAT
**************************************************..(((..((((..(((.((((((..........))))))....)))..))))..)))....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M055
female body
........CGCCAGGGTAGGGCTTCAAT..................................................................................................................................... 20 3 2 0.50 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4784:8822254-8822414 - der_764 G---TAATCCTGCGGTCCGATTCTGAAGTTAATCCCGATAGTTTCAAATTTGCGTAAGTTGACTATGAGAT-ATGA-CCAA-A--AAGGA--------TGTTGTGCTGACT-TT----GA----------G-TTCCCT--TCTAGCTGGGAGACTTCCGATGGACAGTCAGCCAATGCCGAGGGTCATCTGAATA
droYak3 3L:6710168-6710328 - C---AAATCCTGCGGTCCGAGTCTGATGTTGGACCCGATAGCTTCAAATACGAGTAAGTTGACTGTGAGAT-ATGA-CCCA-A--AGGGA--------TGCCTAACTGACT-TT----GA----------C-TTCCTT--CCCAGCTGGGAGACTTCCGATGGACAGGCTGCTCAAGCTGAGGGTCATCTGAACA
droSec2 scaffold_2:6071508-6071668 - G---AAATCCTGCGCAGTAATTCCGACGTTGGATCCGAATCATTCAAATACGAGTAAGTTGCCTATCAGAA-ATGA-CACA-A--GAGGA--------TACCTAGTTGACG-CT----GA----------C-TTCCTT--CTTAGGTTTGAAATTACCGATGGACAGGCCGCTCAAGCCGAAGGTCAGCTGAAGA
droSim2 3l:6033091-6033251 - G---AAATCGTGCGCAGTAATTCCGACGTTGGAGCCGAATCATTCAAATACGAGTAAGTTGCCTATCAGAA-ATGA-CCCA-A--AAGGA--------TACCTAGTTGACA-CT----GA----------C-TTCCTT--CTTAGCTGGGAAATCTCCGATGGACAGGCCGCTGAAGCCGAAGGTAAGCTGAATA
dm3 chr3L:6123800-6123960 - A---CAATCGTGCGCTCTGAATCCGACGTTGGACCCGAAAGCTTCAAATACGAGTAAGTTGCCTATGAGAA-ATGA-CCCA-A--AAGGA--------TACCTAGCTGACA-CT----GA----------C-TTCCTT--CTTAGCTGGGAAACCTCCGATGGACAGGCTGCTCAAGCTGTAGGTCAGCTGAACG
droEug1 scf7180000409466:3915870-3916033 + GTTCAAATCCTGAAGTCGGAATCCGATGTTGGACCCGAGAGCTTCTCTTACGGGTAAGTTAATTGAGAGAG-CTGT-CTGA-A--AAGGA--------TTCCAAGCTGACG-TT----GA----------C-CTTCTT--AATAGCTGGGCGACTAGCGATGGACAGACTGCTGAGGCCGCTGGTAAGGTGGAGA
droBia1 scf7180000302193:3652986-3653144 - C---AAATCTTGCGATCGGAATCCGACGTTGGACCCGAGAGCTTCAAATACGAGTAAGTAGATTG--GCAG-CTGC-CCCA-A--AGGGA--------TGCCTAACTAATG-CT----GA----------C-TTTCGT--AACAGCTGGGAGACTAGCGATGGTCAGGCAGCTCAGGCCCAAGGTGTGCTGAAGA
droTak1 scf7180000415809:16642-16803 - C---AAATCCTGCGATCGGAATCCGATGTTGGACCCGAGAGCTTCAAATACGAGTAAGTTGATT--GAGAG-CTGC-TTCA-T--AAGGA--------TGACTAACTTACT-CCTC-CGA----------C-TTCCTT--CTCAGCTGGGAGACTAGCGATGGTCAGGCTGCTAATGCCGCAGGTGAGCTGAAGA
droEle1 scf7180000491193:937566-937722 - -----AATCCTGCGATCGGAATCCGATGTTGGACCCGAAAGCTTCAAATACGAGTAAGTTGATT--GAGAG-CTGC-TTAA-A--AAGGA--------TACCAAACTGACT-TT----GC----------C-TTCATT--ATTAGCTGGGAGACTAGCGATGGCCAGTCGGCTCAGGCCTCGGGTCAGCTGAACA
droRho1 scf7180000777877:18495-18653 - C---AAATCCTGCGATCGGAATCCGATGTTGGACCTGAGAGCTTCAAATACGAGTGAGTTATTTA--AGAG-CTGC-TTCA-A--AAGGA--------TGACTAACTGAGT-TT----GA----------C-TTCATA--ATTAGCTGGGAGACTAGCGATGGCCAGGCGGCTCAAGCCGCGGGACTGCTGAAGA
droFic1 scf7180000453929:1445240-1445401 - G---AGATCGTGAGGCAAGCCTCCGATGTCGGACCCGAGAACTTCTCTTACGCGTAAGTTACC---GAGAG-CT-C-TTCC-A--AAGGATA------CAAAT-TCTGACT-CCTACTT-------------CTCATCTTCTCAGCTGGGAGACCAGCGATGGCCAGAAGGCTGATGCCGCTGGTGAGCTGAAGA
droKik1 scf7180000302334:640611-640774 - C---AGATCCTCCGTTCGGAGTCCGATGTTGGACCCGAGAGCTTCAAATACGAGTAAGTAAACT--GAGAA-CTGA-TCCAGC--AAGGA--------TAAACAACTGACT-CTCC-TCCA---------C-TTCCTT--GTCAGCTGGGAGACTAGCGATGGCCAGGCTGCTCAGGCAGCGGGACAGCTGAAGA
droAna3 scaffold_13337:20785440-20785604 + A---CGATCCTGCGGTCGGAGTCTGACGTCGGACCCGAGAGCTTCAAATACGGGTATGTTATAAAAGTGAC-C--AACGCC-AAAAAGGA--------CCAGTTCCTAATC-CCT---GT----------C-TTTCTCCATTTAGCTGGGAGACCAGCGATGGTCAGTCCGCTCAGGCTGACGGACACCTGAACA
droBip1 scf7180000396707:609035-609200 - C---AGATCCTGAGGTCGGAGTCTGATGTCGGACCTGAGAGCTTCAAATACGAGTAAGATAAAAG-GACAA-TTAC-TTAC-AAATAGGA--------CAAAT-ACTTATTTCCT---GC----------CCTTCTCTTAACTAGCTGGGAGACCAGCGATGGTCAGGCTGCTCAGGCTGCAGGACAGCTGAAGA
dp5 XR_group6:9540852-9541012 + A---CCATCCTCCGCTCTGAGTCGGATGTTGGACCCGAAAACTTCAGCTATGCGTAAGTCCTTAA-TACAA-ATCA-ACAT-C--AAGGA--------TCAGC-TCTAACT-AT----GA----------C-TCAATTTGGATAGATTCGAGACCAGCGACGGAACTGCCGCCCAGGAATCGGGAGTCCTGAAGA
droPer2 scaffold_35:181424-181584 - A---CCATCCTCCGCTCTGAGTCGGATGTTGGACCCGAAAACTTCAGCTATGCGTAAGTCCTTAA-TACAA-ATCA-ACAT-C--AAGGA--------TCAGC-TCTAACT-AT----GA----------C-TCAATTTGGATAGATTCGAGACCAGCGACGGAACTGCCGCCCAGGAATCGGGAGTCCTGAAGA
droWil2 scf2_1100000004511:3428565-3428732 - G---AGGTCCTTCGCTCCGAATTTGATGTTGGACCTGACAGCTTCAAATATGCGTGAGTGACTAA--AGAT-TTTA-TTCC-T--GTGGAT-------TATCCTTCTGATC-CTTA-TCAA--------TTCTTTTTTTATGTAGTTATGAGACCTCTGATGGTATCAACTCTGAAGCTGAGGGACATCTGAACA
droVir3 scaffold_13049:675938-676102 - G---GAGTAGTGCGTCAAGAATCAGATGTTAGTCCAACTGGCTTCAAATATGCGTAAGTTTTCAC--AGTC-TCCAC-A-------GTCA--TCTCGTCATCTCGCTGATC-CTT---TA----------ATTTCTCTACTGCAGCCTGGAGCAGACTGATGGTAGCAAGGCTGAGGCCGAGGGTCAGCTGAAGA
droMoj3 scaffold_6680:463023-463185 - C---AGATTTTGAGGTCGGAGTCGGATGTTGGACCCGAAAACTTCAATTATGCGTAAGTGTTCAT-C-AAT-ACCAT-A--GT--TGATA--------TTATTTACTAATC-CTTT-TTA----------T-TTCCTTTCTGCAGTTTTGAGACATCCGATGGTACTGCAGCCCAAGCTCAGGGCCAGCTGAATA
droGri2 scaffold_512:207-382 - G---AAATTGTGCGACACGATTCTGAGGTCGGGCCCGAAGGCTACAAATTTGCGTAAGTAATTAA-C-ATTTAGAG-AGA-GT--TACTA--------TAATTTTCTCATA-CGTT-TGTTTTTTTCAACTACTACTTACTTCAGTGTGGAGACTTCCGATGGTACCAGCAAACACGAAGAGGGTCACCTTAAGG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
G---TAATCCTGCGGTCCGATTCTGAAGTTAATCCCGATAGTTTCAAATTTGCGTAAGTTGACTATGAGAT-ATGA-CCAA-A--AAGGA--------TGTTGTGCTGACT-TT----GA----------G-TTCCCT--TCTAGCTGGGAGACTTCCGATGGACAGTCAGCCAATGCCGAGGGTCATCTGAATASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
....................................................................................................TTGTGCTGACT-TT----GA----------G-TTCCCT--TCTAG..................................................27223.004654033040
.....................................................................................................TGTGCTGACT-TT----GA----------G-TTCCCT--TCTAG..................................................26212.502513021000
......................................................................................................................................................................GTCAGCCAATGCCGAGGGT..........1923.5070106000
..................................................................................................................................................................GACAGTCAGCCAATGCCGAGGGT..........2322.5050104000
......................................................................................................................................................................GTCAGCCAATGCCGAGGGTC.........2022.5050203000
..........................................................................................................................................................TTCCGATGGACAGTCAGCC......................1922.0040103000
..............................................................................................................................................................GATGGACAGTCAGCCAAT...................1822.0040004000
.........................................................................................................................................................CTTCCGATGGACAGTCAGCC......................2022.0040202000
G---TAATCCTGCGGTCCGATTCTGAA........................................................................................................................................................................2412.0020200000
..............................................................................................................................................................GATGGACAGTCAGCCAATGCCGAGG............2522.0040400000
..................................................................................................................................................................GACAGTCAGCCAATGCCGAGGGTC.........2422.0040103000
..............................................................................................................................................................GATGGACAGTCAGCCAATGCC................2121.5030201000
.............................................................................................................................................................CGATGGACAGTCAGCCAAT...................1921.5030003000
..............................................................................................................................................................GATGGACAGTCAGCCAATGCCGAGGGT..........2721.5030102000
...................ATTCTGAAGTTAATCCCGATAGT.........................................................................................................................................................2311.0010100000
............CGGTCCGATTCTGAAGTTAATCCC...............................................................................................................................................................2411.0010100000
...................................................................................................GTTGTGCTGACT-TT----GA----------G-TTCCCT--TCTAG..................................................2821.0020101000
....................................................................................................................................................................CAGTCAGCCAATGCCGAGGGT..........2121.0020002000
.................................................................................................................................................................GGACAGTCAGCCAATGCCGAGGGTC.........2521.0020101000
..................GATTCTGAAGTTAATCCCGATAGTTT.......................................................................................................................................................2611.0010100000
..................GATTCTGAAGTTAATCCCGATAGC.........................................................................................................................................................2411.0010100000
...........................GTTAATCCCGATAGTTTCAAATT.................................................................................................................................................2311.0010100000
............................TTAATCCCGATAGTTTCAAATT.................................................................................................................................................2211.0010001000
.............GGTCCGATTCTGAAGTTAATCCCGA.............................................................................................................................................................2511.0010001000
.............GGTCCGATTCTGAAGTTAATCCCGATA...........................................................................................................................................................2711.0010001000
G---TAATCCTGCGGTCCGATTCTGAAGT......................................................................................................................................................................2611.0010001000
.................CGATTCTGAAGTTAATCCCGATA...........................................................................................................................................................2311.0010100000
....................................................................................................TTGTGCTGACT-TT----GA----------G-TTCCCT--TCTAT..................................................2721.0020002000
...........................................................................................................................................................TCCGATGGACAGTCAGCCA.....................1921.0020002000
G---TAATCCTGCGGTCCGATTCTGA.........................................................................................................................................................................2311.0010100000
.....................................................................................................................................................................AGTCAGCCAATGCCGAGGGTC.........2121.0020101000
.....................................................................................................................................................................AGTCAGCCAATGCCGAGG............1821.0020200000
G---TAATCCTGCGGTCCGATT.............................................................................................................................................................................1911.0010001000
...........................GTTAATCCCGATAGTTTC......................................................................................................................................................1811.0010001000
...............................................................................................................................................................ATGGACAGTCAGCCAATGCCGAG.............2321.0020002000
..........................................................................................................................................................TTCCGATGGACAGTCAGCCA.....................2021.0020002000
..................................................................................................................................................................GACAGTCAGCCAATGCCGAGG............2121.0020200000
..................................................................................................................................................................GACAGTCAGCCAATGCCGAGC............2120.5010100000
.........................................................................................................................................................CTTCCGATGGACAGTCAGCCAAT...................2320.5010001000
........................................................................................................................................................ACTTCCGATGGACAGTCAGC.......................2020.5010001000
.........................................................................................................................................................CTTCCGATGGACAGTCAGCCAATGCC................2620.5010100000
.........................................................................................................................................................CTTCCGATGGACAGTCAGCCAATGC.................2520.5010100000
....................................................................................................TTGTGCTGACT-TT----GA----------G-TTCCCT--TC.....................................................2420.5010001000
.............................................................................................................................................................................AATGCCGAGGGTCATCTGAATA2220.5010100000
..............................................................................................................................................................GATGGACAGTCAGCCAATGCCGAGGGTC.........2820.5010100000
....................................................................................................................................................................CAGTCAGCCAATGCCGAGGGTCAT.......2420.5010100000
.................................................................................................................................................................GGACAGTCAGCCAATGCCGAGG............2220.5010100000
.................................................................................................................................................CTGGGAGACTTCCGATGGA...............................1920.5010001000
........................................................................................................................................................................CAGCCAATGCCGAGGGTCAT.......2020.5010100000
..............................................................................................................................................................GATGGACAGTCAGCCAATGCCGAG.............2420.5010100000
.................................................................................................................................................CTGGGAGACTTCCGATGGAC..............................2020.5010001000
...................................................................................................................................................................ACAGTCAGCCAATGCCGAGGGTC.........2320.5010100000
...........................................................................................................................................................TCCGATGGACAGTCAGCCAATGCC................2420.5010100000
........................................................................................................................................................................CAGCCAATGCCGAGGGTC.........1820.5010100000
..........................................................................GA-CCAA-A--AAGGA--------TGTTGTGC.........................................................................................2020.5010100000
..........................................................................................................................................................TTCCGATGGACAGTCAGCCAAT...................2220.5010001000
.....................................................................................................................................................GAGACTTCCGATGGACAG............................1820.5010100000
.............................................................................................................................................................................AATGCCGAGGGTCATCTGAAT.2120.5010001000
......................................................................................................GTGCTGACT-TT----GA----------G-TTCCCT--TCTAG..................................................2520.5011000000
...................................................................................................................................................................ACAGTCAGCCAATGCCGAGGGC..........2220.5010100000
...............................................................................................................................................AGCTGGGAGACTTCCGATGG................................2020.5010001000
.......................................................................................................................................................GACTTCCGATGGACAGTCAGC.......................2120.5010100000
..................................................................................................................................................TGGGAGACTTCCGATGGACAGT...........................2220.5010100000
.............................................................................................................................................................CGATGGACAGTCAGCCAA....................1820.5010001000
................................................................................................................................................................................GCCGAGGGTCATCTGAATA1920.5010001000
..............................................................................................................................................................................ATGCCGAGGGTCATCTGA...1820.5011000000
....................................................................................................TTGTGCTGACT-TT----GA----------G-TTCCCT--TCTA...................................................2620.5010001000
.........................................................................................................................................................CTTCCGATGGACAGTCAGC.......................1920.5010100000
............................................................................................................................................................CCGATGGACAGTCAGCCAATGCCGAGG............2720.5010100000
............................................................................................................................................................................CAATGCCGAGGGTCATCTGA...2020.5010001000
............................................................................................................................................................CCGATGGACAGTCAGCCAATGCC................2320.5010100000
..........................................................................................................................................................TTCCGATGGACAGTCAGCCAA....................2120.5010001000
..............................................................................................................................................................................ATGCCGAGGGTCATCTGAATA2120.5010001000
.....................................................................................................................................................................AGTCAGCCAATGCCGAGGGC..........2030.3310100000
droYak3
C---AAATCCTGCGGTCCGAGTCTGATGTTGGACCCGATAGCTTCAAATACGAGTAAGTTGACTGTGAGAT-ATGA-CCCA-A--AGGGA--------TGCCTAACTGACT-TT----GA----------C-TTCCTT--CCCAGCTGGGAGACTTCCGATGGACAGGCTGCTCAAGCTGAGGGTCATCTGAACASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................CTGGGAGACTTCCGATGGACAGGC..........................2422.00400310000000
......................CTGATGTTGGACCCGATAGC.........................................................................................................................................................2021.00200110000000
........CCTGCGGTCCGAGTCTGATGTTG....................................................................................................................................................................2321.00200200000000
.....................TCTGATGTTGGACCCGATAGC.........................................................................................................................................................2121.00200110000000
...................................................................................................GCCTAACTGACT-TT----GA----------C-TTCCTT--CCC....................................................2630.67200200000000
....................................................................................................CCTAACTGACT-TT----GA----------C-TTCCTT--CCC....................................................2530.67200200000000
........................GATGTTGGACCCGATAGCTTC......................................................................................................................................................2130.67200200000000
.........................ATGTTGGACCCGATAGCTT.......................................................................................................................................................1930.67200110000000
.....................TCTGATGTTGGACCCGATAG..........................................................................................................................................................2020.50100100000000
..................GAGTCTGATGTTGGACCCGATA...........................................................................................................................................................2220.50100100000000
..................................................................................................................................................................GACAGGCTGCTCAAGCTGAGGGT..........2320.50100100000000
.....AATCCTGCGGTCCGAGTCTG..........................................................................................................................................................................2020.50100100000000
.......................................................................................................................................................GACTTCCGATGGACAGGC..........................1820.50100100000000
................CCGAGTCTGATGTTGGAC.................................................................................................................................................................1820.50100100000000
.................CGAGTCTGATGTTGGACCCGAC............................................................................................................................................................2220.50100100000000
......................CTGATGTTGGACCCGATAGCTT.......................................................................................................................................................2220.50100100000000
.............................................................................................................................................................CGATGGACAGGCTGCTCC....................1820.50100010000000
.....................................................................................................................................................................AGGCTGCTCAAGCTGAGGGT..........2020.50101000000000
.....AATCCTGCGGTCCGAGTCTGAT........................................................................................................................................................................2220.50100100000000
.........CTGCGGTCCGAGTCTGAT........................................................................................................................................................................1820.50100100000000
......................................................................................................................................................AGACTTCCGATGGACAGGCTGCT......................2320.50100100000000
........................................................................................................................................................ACTTCCGATGGACAGGCTGCT......................2120.50100100000000
.......TCCTGCGGTCCGAGT.............................................................................................................................................................................1520.50100000000001
..........................................................................................................................................................TTCCGATGGACAGGCTGCTC.....................2020.50100100000000
..................GAGTCTGATGTTGGACCC...............................................................................................................................................................1820.50100100000000
.................CGAGTCTGATGTTGGACCCGAT............................................................................................................................................................2220.50100100000000
.......................................................................................................................................................GACTTCCGATGGACAGGCT.........................1920.50100010000000
.........CTGCGGTCCGAGTCTGATGTTG....................................................................................................................................................................2220.50100010000000
................................................................................................................................................................TGGACAGGCTGCTCAAGCTGAGGGTC.........2620.50100100000000
...........GCGGTCCGAGTCTGATGTTGGAC.................................................................................................................................................................2320.50100100000000
.......................................................................................................................................................................GCTGCTCAAGCTGAGGGTCATCTG....2420.50100100000000
.....................................................................................................................................................................AGGCTGCTCAAGCTGAGGGTC.........2120.50100010000000
................................................................................................................................................................TGGACAGGCTGCTCAAGCTGAGGGC..........2520.50100100000000
......................CTGATGTTGGACCCGATAGCTTC......................................................................................................................................................2320.50100100000000
...............TCCGAGTCTGATGTTGGACCC...............................................................................................................................................................2120.50100100000000
........................GATGTTGGACCCGATAGCTTCAAAT..................................................................................................................................................2530.33100100000000
.............................................................................................................................................................................CAAGCTGAGGGTCATCTGA...1930.33100100000000
...................................................................................................................................................GGGAGACTTCCGATGGACAGG...........................2130.33100100000000
.....................................................................................................CTAACTGACT-TT----GA----------C-TTCCTT--CC.....................................................2330.33100100000000
..........................TGTTGGACCCGATAGCTTC......................................................................................................................................................1930.33100100000000
..............................................................................................................................................................GATGGACAGGCTGCTCAA...................1830.33100010000000
........................GATGTTGGACCCGATAGCTT.......................................................................................................................................................2030.33100100000000
..........................................................................................................................................................................GCTCAAGCTGAGGGTCATCTGAAC.2430.33100100000000
....................................GATAGCTTCAAATACGACC............................................................................................................................................1930.33100100000000
........................GATGTTGGACCCGATAGCTTCA.....................................................................................................................................................2230.33100100000000
........................GATGTTGGACCCGATAGC.........................................................................................................................................................1830.33100100000000
.....................................................................................................................................................GAGACTTCCGATGGACAGG...........................1930.33100100000000
droSec2
G---AAATCCTGCGCAGTAATTCCGACGTTGGATCCGAATCATTCAAATACGAGTAAGTTGCCTATCAGAA-ATGA-CACA-A--GAGGA--------TACCTAGTTGACG-CT----GA----------C-TTCCTT--CTTAGGTTTGAAATTACCGATGGACAGGCCGCTCAAGCCGAAGGTCAGCTGAAGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................GTAATTCCGACGTTGGATCCGAAT...........................................................................................................................................................2421.0020020
.............GCAGTAATTCCGACGTTG....................................................................................................................................................................1821.0020011
..........TGCGCAGTAATTCCGACGTTGGAT.................................................................................................................................................................2420.5010010
..........................................................................................................................................................TACCGATGGACAGGCCGCTCAAG..................2320.5010010
...................ATTCCGACGTTGGATCCG..............................................................................................................................................................1820.5010010
...............................................................................................................................................................................AGCCGAAGGTCAGCTGAAG.1920.5010100
........................................................................................................................................................................CCGCTCAAGCCGAAGGTCA........1920.5010010
.......................................................................................................................................................AATTACCGATGGACAGGC..........................1820.5010010
.............................................................................................................................................................................CAAGCCGAAGGTCAGCTGA...1920.5010001
...................................................................................................................................................TTGAAATTACCGATGGACAGGCC.........................2320.5010010
.........................................................................................................................................................TTACCGATGGACAGGCCGCTC.....................2120.5010010
..............................................................................................................................................................GATGGACAGGCCGCTCAA...................1820.5010010
.......................................................................................................................................................AATTACCGATGGACAGGCCGCTCA....................2420.5010010
.........................................................................................................................................................TTACCGATGGACAGGCCGC.......................1920.5010010
.................................................................................................................................................GTTTGAAATTACCGATGGACAGG...........................2320.5010010
..........................................................................................................TGACG-CT----GA----------C-TTCCTT--CTT....................................................1920.5010010
.....AATCCTGCGCAGTAATTCCGACGTTGG...................................................................................................................................................................2720.5010010
droSim2
G---AAATCGTGCGCAGTAATTCCGACGTTGGAGCCGAATCATTCAAATACGAGTAAGTTGCCTATCAGAA-ATGA-CCCA-A--AAGGA--------TACCTAGTTGACA-CT----GA----------C-TTCCTT--CTTAGCTGGGAAATCTCCGATGGACAGGCCGCTGAAGCCGAAGGTAAGCTGAATASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................GTAATTCCGACGTTGGAGCC...............................................................................................................................................................20112.0012001200000000000000
................GTAATTCCGACGTTGGAGCCGAATC..........................................................................................................................................................2517.00700700000000000000
...............AGTAATTCCGACGTTGGAGC................................................................................................................................................................2016.00600600000000000000
..................AATTCCGACGTTGGAGCCGAAT...........................................................................................................................................................2216.00600600000000000000
...............AGTAATTCCGACGTTGGAGCCGA.............................................................................................................................................................2315.00500500000000000000
...............AGTAATTCCGACGTTGGAGCC...............................................................................................................................................................2115.00500500000000000000
..............................................................................................................................................................GATGGACAGGCCGCTGAAGC.................2025.0010001000000000000000
...............AGTAATTCCGACGTTGGAGCCGAATC..........................................................................................................................................................2615.00500500000000000000
..................AATTCCGACGTTGGAGCC...............................................................................................................................................................1814.00400400000000000000
................GTAATTCCGACGTTGGAGCCGA.............................................................................................................................................................2214.00400400000000000000
.............GCAGTAATTCCGACGTTGGAGCC...............................................................................................................................................................2313.00300300000000000000
G---AAATCGTGCGCAGTAATTCCGAC........................................................................................................................................................................2412.00200200000000000000
...................ATTCCGACGTTGGAGCCGAATC..........................................................................................................................................................2212.00200200000000000000
..................AATTCCGACGTTGGAGCCGAATC..........................................................................................................................................................2312.00200200000000000000
.....................................................................................................................................................GAAATCTCCGATGGACAGGCC.........................2112.00200200000000000000
................GTAATTCCGACGTTGGAGC................................................................................................................................................................1912.00200200000000000000
.......................................................................................................................................................AATCTCCGATGGACAGGCCGCTGAAGC.................2712.00200200000000000000
..............................................................................................................................................................GATGGACAGGCCGCTGAAG..................1921.50300200000000100000
.........GTGCGCAGTAATTCCGACGTTGGAGC................................................................................................................................................................2611.00100100000000000000
...............AGTAATTCCGACGTTGGAGCCGG.............................................................................................................................................................2311.00100100000000000000
................GTAATTCCGACGTTGGAGCCC..............................................................................................................................................................2111.00100100000000000000
......................................................................................................................................................................GGCCGCTGAAGCCGAAGGTAAGCTGAAT.2821.00200200000000000000
........................................................................................................................................................ATCTCCGATGGACAGGCCG........................1911.00100100000000000000
.............GCAGTAATTCCGACGTTGGAGCCGA.............................................................................................................................................................2511.00100000000000100000
...........................GTTGGAGCCGAATCATTC......................................................................................................................................................1811.00100100000000000000
...............AGTAATTCCGACGTTGGAGCCG..............................................................................................................................................................2211.00100100000000000000
.............................................................................................................................................................CGATGGACAGGCCGCTGAAGCC................2221.00200200000000000000
...............AGTAATTCCGACGTTGGAGCCGAAT...........................................................................................................................................................2511.00100100000000000000
....................TTCCGACGTTGGAGCCGAAT...........................................................................................................................................................2011.00100100000000000000
...................ATTCCGACGTTGGAGCCG..............................................................................................................................................................1811.00100100000000000000
...................................................................................................................................................GGGAAATCTCCGATGGACAGGCC.........................2311.00100100000000000000
................GTAATTCCGACGTTGGAGCCGAAT...........................................................................................................................................................2411.00100100000000000000
...........................GTTGGAGCCGAATCATTCAAATACGAC.............................................................................................................................................2711.00100100000000000000
...............AGTAATTCCGACGTTGGAGG................................................................................................................................................................2011.00100100000000000000
...........GCGCAGTAATTCCGACGTTGGA..................................................................................................................................................................2211.00100000000000100000
........................................................................................................................................................ATCTCCGATGGACAGGCCGCTGAAGC.................2611.00100100000000000000
....................................................................................................................................TTCCTT--CTTAGCTGGGAAATCTCCGAT..................................2711.00100000000000010000
..................AATTCCGACGTTGGAGCCG..............................................................................................................................................................1911.00100100000000000000
...................................................................................................................................................GGGAAATCTCCGATGGACAGGCCGC.......................2511.00100000000000100000
....................TTCCGACGTTGGAGCCGAATCATTC......................................................................................................................................................2511.00100100000000000000
....................................................................................................................................................GGAAATCTCCGATGGACAGGCC.........................2211.00100100000000000000
..............................................................................................................................................................GATGGACAGGCCGCTGAAGCCG...............2220.50100100000000000000
..........................................................................................................................................................CTCCGATGGACAGGCCGC.......................1820.50100100000000000000
...........................................................................................................................................................TCCGATGGACAGGCCGCTGAAGC.................2320.50100100000000000000
...............................................................................................................................................................ATGGACAGGCCGCTGAAGCCGAAG............2420.50100100000000000000
..........................................................................................................................................................CTCCGATGGACAGGCCGCTGAAGC.................2420.50100100000000000000
.........................................................................................................................................................................CGCTGAAGCCGAAGGTAAG.......1920.50100100000000000000
.............................................................................................................................................................CGATGGACAGGCCGCTGAAGCCGA..............2420.50100000000000100000
..........................................................................................................................................................CTCCGATGGACAGGCCGCC......................1920.50100100000000000000
dm3
A---CAATCGTGCGCTCTGAATCCGACGTTGGACCCGAAAGCTTCAAATACGAGTAAGTTGCCTATGAGAA-ATGA-CCCA-A--AAGGA--------TACCTAGCTGACA-CT----GA----------C-TTCCTT--CTTAGCTGGGAAACCTCCGATGGACAGGCTGCTCAAGCTGTAGGTCAGCTGAACGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................CTCCGATGGACAGGCTGCTC.....................2032.3370000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000100500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................GAAACCTCCGATGGACAGGCT.........................2131.3340000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000001000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CGACGTTGGACCCGAAAGC.........................................................................................................................................................1931.3340000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................GATGGACAGGCTGCTCAA...................1831.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000011010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................AGGCTGCTCAAGCTGTAGGTCA........2231.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GCGCTCTGAATCCGACGTTGGACCC...............................................................................................................................................................2531.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CAATCGTGCGCTCTGAATCC...........................................................................................................................................................................2030.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................GCTCAAGCTGTAGGTCAG.......1830.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000
...........................GTTGGACCCGAAAGCTTC......................................................................................................................................................1830.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000
............................TTGGACCCGAAAGCTTCAAAT..................................................................................................................................................2130.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................AACCTCCGATGGACAGGCTG........................2030.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.........................................................................................................................................................................TGCTCAAGCTGTAGGTCAGCT.....2130.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................GGAAACCTCCGATGGACAGGG..........................2130.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................AACCTCCGATGGACAGGCT.........................1930.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................GCTCAAGCTGTAGGTCAGCTGAA..2330.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................TGCTCAAGCTGTAGGTCA........1830.6720000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................GGAAACCTCCGATGGACAGGCT.........................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GCGCTCTGAATCCGACGTTGG...................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................AATACGAGTAAGTTGCCTA..................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...........GCGCTCTGAATCCGACGTTG....................................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................GACCCGAAAGCTTCAAATACGA..............................................................................................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................GCTGCTCAAGCTGTAGGTCA........2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.......................................................................................................................................................AACCTCCGATGGACAGGG..........................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................GAAACCTCCGATGGACAGGCTGCTC.....................2530.3310000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................ACCTCCGATGGACAGGCTGCTC.....................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................CTGCTCAAGCTGTAGGTCAGCT.....2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..........TGCGCTCTGAATCCGACGTTGGAC.................................................................................................................................................................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................TT--CTTAGCTGGGAAACCTCCGATGGA...............................2630.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........GTGCGCTCTGAATCCGACGT......................................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................ATCCGACGTTGGACCCGAA............................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..............CTCTGAATCCGACGTTGGACCCGA.............................................................................................................................................................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................CTGGGAAACCTCCGATGGACAGGC..........................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TGCGCTCTGAATCCGACG.......................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................TAGCTGGGAAACCTCCGATGGACAG............................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................TGCTCAAGCTGTAGGTCAGC......2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................CTGAATCCGACGTTGGACC................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..................GAATCCGACGTTGGACCCGAA............................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................AACCTCCGATGGACAGGCTGCT......................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................................................................................................................................................................................GCTGTAGGTCAGCTGAAC.1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................TTGGACCCGAAAGCTTCAAATACG...............................................................................................................................................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................GGACAGGCTGCTCAAGCTGTAGGT..........2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................AGGCTGCTCAAGCTGTAGGTCG........2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................CCGATGGACAGGCTGCTCAAG..................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................CTGGGAAACCTCCGATGGACAGGCT.........................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
.........GTGCGCTCTGAATCCGACGTTGGACCCG..............................................................................................................................................................2830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
............CGCTCTGAATCCGACGTTGGAC.................................................................................................................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
............CGCTCTGAATCCGACGTT.....................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CTGAATCCGACGTTGGACCC...............................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GCTCTGAATCCGACGTTG....................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................GGAAACCTCCGATGGACAGGGC.........................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CGACGTTGGACCCGAAAGCT........................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................ATCCGACGTTGGACCCGAAAG..........................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GCTCTGAATCCGACGTTGGACC................................................................................................................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............CTCTGAATCCGACGTTGGACC................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........................................................................................................................................................ACCTCCGATGGACAGGCTGCTCAA...................2430.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................CTGAATCCGACGTTGGAC.................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...................................................................................................................................................GGGAAACCTCCGATGGACAGGCTGCTC.....................2730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................TGCTCAAGCTGTAGGTCACG......2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.........GTGCGCTCTGAATCCGAC........................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................GATGGACAGGCTGCTCAAG..................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
..............................................................................................................................................................GATGGACAGGCTGCTCAAGCT................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................TAAGTTGCCTATGAGAA-ATGA-CCCA-.................................................................................................................2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................CCGACGTTGGACCCGAAAGC.........................................................................................................................................................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
......................................................................................................................................................AAACCTCCGATGGACAGGCT.........................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................GGAAACCTCCGATGGACAGGCTG........................2330.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........CGTGCGCTCTGAATCCGAC........................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........GTGCGCTCTGAATCCGACGTTG....................................................................................................................................................................2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................GGACAGGCTGCTCAAGCTGTAGGTC.........2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................TGGGAAACCTCCGATGGACAG............................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......ATCGTGCGCTCTGAATCC...........................................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................AGGCTGCTCAAGCTGTAGGT..........2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
........................GACGTTGGACCCGAAAGC.........................................................................................................................................................1830.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................ACCTCCGATGGACAGGCTGC.......................2030.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
....................................................................................................CCTAGCTGACA-CT----GA----------C-TTCCTT--CTTAG..................................................2730.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................ATGGACAGGCTGCTCAAGCTGTAGG...........2530.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.......................................................................................................................................................................GCTGCTCAAGCTGTAGGTCAGC......2230.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.....................................................................................................................................................GAAACCTCCGATGGACAGGGC.........................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................CAAGCTGTAGGTCAGCTGTTA.21110.0910000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
droEug1
GTTCAAATCCTGAAGTCGGAATCCGATGTTGGACCCGAGAGCTTCTCTTACGGGTAAGTTAATTGAGAGAG-CTGT-CTGA-A--AAGGA--------TTCCAAGCTGACG-TT----GA----------C-CTTCTT--AATAGCTGGGCGACTAGCGATGGACAGACTGCTGAGGCCGCTGGTAAGGTGGAGASizeHit CountTotal NormTotal
No Reads
droBia1
C---AAATCTTGCGATCGGAATCCGACGTTGGACCCGAGAGCTTCAAATACGAGTAAGTAGATTG--GCAG-CTGC-CCCA-A--AGGGA--------TGCCTAACTAATG-CT----GA----------C-TTTCGT--AACAGCTGGGAGACTAGCGATGGTCAGGCAGCTCAGGCCCAAGGTGTGCTGAAGASizeHit CountTotal NormTotal
No Reads
droTak1
C---AAATCCTGCGATCGGAATCCGATGTTGGACCCGAGAGCTTCAAATACGAGTAAGTTGATT--GAGAG-CTGC-TTCA-T--AAGGA--------TGACTAACTTACT-CCTC-CGA----------C-TTCCTT--CTCAGCTGGGAGACTAGCGATGGTCAGGCTGCTAATGCCGCAGGTGAGCTGAAGASizeHit CountTotal NormTotal
No Reads
droEle1
-----AATCCTGCGATCGGAATCCGATGTTGGACCCGAAAGCTTCAAATACGAGTAAGTTGATT--GAGAG-CTGC-TTAA-A--AAGGA--------TACCAAACTGACT-TT----GC----------C-TTCATT--ATTAGCTGGGAGACTAGCGATGGCCAGTCGGCTCAGGCCTCGGGTCAGCTGAACASizeHit CountTotal NormTotal
No Reads
droRho1
C---AAATCCTGCGATCGGAATCCGATGTTGGACCTGAGAGCTTCAAATACGAGTGAGTTATTTA--AGAG-CTGC-TTCA-A--AAGGA--------TGACTAACTGAGT-TT----GA----------C-TTCATA--ATTAGCTGGGAGACTAGCGATGGCCAGGCGGCTCAAGCCGCGGGACTGCTGAAGASizeHit CountTotal NormTotal
No Reads
droFic1
G---AGATCGTGAGGCAAGCCTCCGATGTCGGACCCGAGAACTTCTCTTACGCGTAAGTTACC---GAGAG-CT-C-TTCC-A--AAGGATA------CAAAT-TCTGACT-CCTACTT-------------CTCATCTTCTCAGCTGGGAGACCAGCGATGGCCAGAAGGCTGATGCCGCTGGTGAGCTGAAGASizeHit CountTotal NormTotal
No Reads
droKik1
C---AGATCCTCCGTTCGGAGTCCGATGTTGGACCCGAGAGCTTCAAATACGAGTAAGTAAACT--GAGAA-CTGA-TCCAGC--AAGGA--------TAAACAACTGACT-CTCC-TCCA---------C-TTCCTT--GTCAGCTGGGAGACTAGCGATGGCCAGGCTGCTCAGGCAGCGGGACAGCTGAAGASizeHit CountTotal NormTotal
No Reads
droAna3
A---CGATCCTGCGGTCGGAGTCTGACGTCGGACCCGAGAGCTTCAAATACGGGTATGTTATAAAAGTGAC-C--AACGCC-AAAAAGGA--------CCAGTTCCTAATC-CCT---GT----------C-TTTCTCCATTTAGCTGGGAGACCAGCGATGGTCAGTCCGCTCAGGCTGACGGACACCTGAACASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....GATCCTGCGGTCGGAGTCTGAC........................................................................................................................................................................2235.33160142000
.................GGAGTCTGACGTCGGACCCGAGAGC.........................................................................................................................................................2523.507070000
....................GTCTGACGTCGGACCCGAGAGC.........................................................................................................................................................2223.507070000
......................CTGACGTCGGACCCGAGAGC.........................................................................................................................................................2023.006051000
................CGGAGTCTGACGTCGGACCCGAGAGC.........................................................................................................................................................2622.004040000
....CGATCCTGCGGTCGGAGTC............................................................................................................................................................................1911.001010000
................................................................................................................................................................TGGTCAGTCCGCTCAGGCT................1921.002011000
....CGATCCTGCGGTCGGAGTCTGAC........................................................................................................................................................................2311.001001000
......................CTGACGTCGGACCCGAGAGCTTCA.....................................................................................................................................................2411.001010000
.............GGTCGGAGTCTGACGTCGGACCCGAGAGC.........................................................................................................................................................2921.002020000
....CGATCCTGCGGTCGGAGTCTGACGTCGG...................................................................................................................................................................2811.001001000
..........................................................................................................................................................................GCTCAGGCTGACGGACACCT.....2021.002011000
..............GTCGGAGTCTGACGTCGGACCCGAGAGC.........................................................................................................................................................2821.002020000
.........................................................................................................................................................................CGCTCAGGCTGACGGACACCT.....2121.002020000
................CGGAGTCTGACGTCGGACCC...............................................................................................................................................................2020.501010000
....................GTCTGACGTCGGACCCGAGAG..........................................................................................................................................................2120.501010000
..........................................................................................................................................................................GCTCAGGCTGACGGACACCTGA...2220.501010000
.................GGAGTCTGACGTCGGACCCGAGA...........................................................................................................................................................2320.501010000
..................GAGTCTGACGTCGGACCCGAGAGC.........................................................................................................................................................2420.501010000
................................................................................................................................................GCTGGGAGACCAGCGATGGTCA.............................2220.501010000
..............................................................................................................................................................................AGGCTGACGGACACCTGAA..1920.501010000
.............................................................................................................................................................CGATGGTCAGTCCGCTCAGGCT................2220.501010000
..............GTCGGAGTCTGACGTCGGACCC...............................................................................................................................................................2220.501010000
..............................................................................................................................................................GATGGTCAGTCCGCTCAGGCT................2120.501010000
..............................................................................................................................................................GATGGTCAGTCCGCTCAGGCC................2120.501010000
.................................................................................................................................................................GGTCAGTCCGCTCAGGCTGACGGACACC......2820.501010000
....................GTCTGACGTCGGACCCGAGAGCTT.......................................................................................................................................................2420.501010000
.....GATCCTGCGGTCGGAGTCTGACGTCG....................................................................................................................................................................2620.501001000
..............GTCGGAGTCTGACGTCGGACCCGAGAGCT........................................................................................................................................................2920.501010000
...........GCGGTCGGAGTCTGACGTCGGA..................................................................................................................................................................2220.501010000
......................CTGACGTCGGACCCGAGAGCTTC......................................................................................................................................................2320.501010000
.................................................................................................................................................CTGGGAGACCAGCGATGGTCAGT...........................2320.501010000
.........................................................................................................................................................................CGCTCAGGCTGACGGACACC......2020.501010000
....................................................................................................................................................................CAGTCCGCTCAGGCTGACGGACACCTGAA..2920.501010000
................CGGAGTCTGACGTCGGACCCGAGA...........................................................................................................................................................2420.501010000
..........................................................................................................................................................................GCTCAGGCTGACGGACACCTGAAC.2420.501010000
.................GGAGTCTGACGTCGGACCCGAGAGCTTC......................................................................................................................................................2820.501010000
....................GTCTGACGTCGGACCCGA.............................................................................................................................................................1820.501010000
........................................................................................................................................................................CCGCTCAGGCTGACGGACACCTG....2320.501010000
......ATCCTGCGGTCGGAGTCTGACGTCG....................................................................................................................................................................2520.501001000
..............................................................................................................................................................GATGGTCAGTCCGCTCAGGCTGAC.............2420.501010000
...........................................................................................................................................................AGCGATGGTCAGTCCGCTCAGGCTGAC.............2720.501010000
............................................................................................................................................................GCGATGGTCAGTCCGCTCAGGCT................2320.501010000
.................................................................................................................................................................GGTCAGTCCGCTCAGGCTGACGGACACCT.....2920.501010000
......ATCCTGCGGTCGGAGTCTGAC........................................................................................................................................................................2130.331001000
.......TCCTGCGGTCGGAGTCTGAC........................................................................................................................................................................2030.331001000
.....GATCCTGCGGTCGGAGTCTGACGT......................................................................................................................................................................2430.331010000
.....GATCCTGCGGTCGGAGTCTGAA........................................................................................................................................................................2240.251001000
.....GATCCTGCGGTCGGAGTC............................................................................................................................................................................1840.251010000
droBip1
C---AGATCCTGAGGTCGGAGTCTGATGTCGGACCTGAGAGCTTCAAATACGAGTAAGATAAAAG-GACAA-TTAC-TTAC-AAATAGGA--------CAAAT-ACTTATTTCCT---GC----------CCTTCTCTTAACTAGCTGGGAGACCAGCGATGGTCAGGCTGCTCAGGCTGCAGGACAGCTGAAGASizeHit CountTotal NormTotal
No Reads
dp5
A---CCATCCTCCGCTCTGAGTCGGATGTTGGACCCGAAAACTTCAGCTATGCGTAAGTCCTTAA-TACAA-ATCA-ACAT-C--AAGGA--------TCAGC-TCTAACT-AT----GA----------C-TCAATTTGGATAGATTCGAGACCAGCGACGGAACTGCCGCCCAGGAATCGGGAGTCCTGAAGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
..................GAGTCGGATGTTGGACCC...............................................................................................................................................................1820.5010010000000
...........................................................................................................................................................AGCGACGGAACTGCCGCCCAGGAATC..............2620.5010000100000
...........................GTTGGACCCGAAAACTTCAGC...................................................................................................................................................2120.5010010000000
............CGCTCTGAGTCGGATGTTGGACC................................................................................................................................................................2320.5010000100000
...........CCGCTCTGAGTCGGATGTTGGACCCGAA............................................................................................................................................................2820.5010010000000
..............CTCTGAGTCGGATGTTGGACCCGA.............................................................................................................................................................2420.5010000100000
droPer2
A---CCATCCTCCGCTCTGAGTCGGATGTTGGACCCGAAAACTTCAGCTATGCGTAAGTCCTTAA-TACAA-ATCA-ACAT-C--AAGGA--------TCAGC-TCTAACT-AT----GA----------C-TCAATTTGGATAGATTCGAGACCAGCGACGGAACTGCCGCCCAGGAATCGGGAGTCCTGAAGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................GATGTTGGACCCGAAAACTTC......................................................................................................................................................2122.004400000
........CCTCCGCTCTGAGTCGGATGTTGGACCC...............................................................................................................................................................2821.503300000
............CGCTCTGAGTCGGATGTTGGACCCGG.............................................................................................................................................................2621.503300000
A---CCATCCTCCGCTCTGAGTCGGAT........................................................................................................................................................................2421.002200000
...........CCGCTCTGAGTCGGATGTTGGACCCGG.............................................................................................................................................................2721.002200000
...........CCGCTCTGAGTCGGATGTTGGACCC...............................................................................................................................................................2521.002200000
....................GTCGGATGTTGGACCCGAAAACTTC......................................................................................................................................................2521.002200000
...............TCTGAGTCGGATGTTGGACC................................................................................................................................................................2021.002200000
..............................................................................................................................................................GACGGAACTGCCGCCCAG...................1821.002200000
..........TCCGCTCTGAGTCGGATGTTGGACCC...............................................................................................................................................................2621.002200000
............CGCTCTGAGTCGGATGTTT....................................................................................................................................................................1920.501001000
............CGCTCTGAGTCGGATGTTGGACCCGAAA...........................................................................................................................................................2820.501100000
...........CCGCTCTGAGTCGGATGTTGGACCCGA.............................................................................................................................................................2720.501001000
.......................................................................................................................................................GACCAGCGACGGAACTGCC.........................1920.501100000
.........................ATGTTGGACCCGAAAACTTCAGC...................................................................................................................................................2320.501100000
.............GCTCTGAGTCGGATGTTGGG..................................................................................................................................................................2020.501100000
............................................................................................................ACT-AT----GA----------C-TCAATTTGGATAG..................................................2120.501100000
............CGCTCTGAGTCGGATGTTGGACCCGAA............................................................................................................................................................2720.501100000
........................GATGTTGGACCCGAAAACTTCA.....................................................................................................................................................2220.501100000
......................................................................................................C-TCTAACT-AT----GA----------C-TCAATTTGGATAG..................................................2620.501100000
..........................................................................CA-ACAT-C--AAGGA--------TCAGC-TCT........................................................................................2020.501100000
.............GCTCTGAGTCGGATGTTGGA..................................................................................................................................................................2020.501100000
.............GCTCTGAGTCGGATGTTG....................................................................................................................................................................1820.501001000
................CTGAGTCGGATGTTGGACCCGA.............................................................................................................................................................2220.501100000
........CCTCCGCTCTGAGTCGGAT........................................................................................................................................................................1920.501100000
...........................................................................................................................................................AGCGACGGAACTGCCGCCCAGGA.................2320.501100000
...............................................................................................................................................................ACGGAACTGCCGCCCAGGAATC..............2220.501100000
..........................................................................................................................................................CAGCGACGGAACTGCCGCCC.....................2020.501100000
.................................................................................................................................................ATTCGAGACCAGCGACGGAACTGCC.........................2520.501100000
..............................................................................................................................................................GACGGAACTGCCGCCCAGGG.................2020.501100000
................CTGAGTCGGATGTTGGACCCGAAA...........................................................................................................................................................2420.501100000
...................................................................................................................................................................AACTGCCGCCCAGGAATCGGGAGT........2420.501001000
.......TCCTCCGCTCTGAGTCGG..........................................................................................................................................................................1820.501100000
...............................GACCCGAAAACTTCAGCT..................................................................................................................................................1820.501001000
...........................GTTGGACCCGAAAACTTC......................................................................................................................................................1820.501100000
.........CTCCGCTCTGAGTCGGAT........................................................................................................................................................................1820.501100000
..................................................................................................................................................................GAACTGCCGCCCAGGAATCGGGA..........2320.501001000
...........CCGCTCTGAGTCGGATGTTGGACCCGAA............................................................................................................................................................2820.501100000
droWil2
G---AGGTCCTTCGCTCCGAATTTGATGTTGGACCTGACAGCTTCAAATATGCGTGAGTGACTAA--AGAT-TTTA-TTCC-T--GTGGAT-------TATCCTTCTGATC-CTTA-TCAA--------TTCTTTTTTTATGTAGTTATGAGACCTCTGATGGTATCAACTCTGAAGCTGAGGGACATCTGAACASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
G---GAGTAGTGCGTCAAGAATCAGATGTTAGTCCAACTGGCTTCAAATATGCGTAAGTTTTCAC--AGTC-TCCAC-A-------GTCA--TCTCGTCATCTCGCTGATC-CTT---TA----------ATTTCTCTACTGCAGCCTGGAGCAGACTGATGGTAGCAAGGCTGAGGCCGAGGGTCAGCTGAAGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
....................................................................................................................................................................AGCAAGGCTGAGGCCGAGGGTC.........2212.002000100000000000000000000000000000000000000000000000000000001000
....................................................................................................................................................................AGCAAGGCTGAGGCCGAGGGTCAGCT.....2611.001000000000000000000000000000000000000000000000000000000000001000
...............CAAGAATCAGATGTTAGTCC................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
........................GATGTTAGTCCAACTGGCTTC......................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................AGACTGATGGTAGCAAGGCTGAGGC.................2511.001000100000000000000000000000000000000000000000000000000000000000
.............GTCAAGAATCAGATGTTAGTC.................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000001000
...........GCGTCAAGAATCAGATGTTAGTC.................................................................................................................................................................2311.001000100000000000000000000000000000000000000000000000000000000000
................AAGAATCAGATGTTAGTCCAACTGGCTT.......................................................................................................................................................2811.001000100000000000000000000000000000000000000000000000000000000000
.................AGAATCAGATGTTAGTCCAACTGGCTT.......................................................................................................................................................2711.001000100000000000000000000000000000000000000000000000000000000000
.........GTGCGTCAAGAATCAGATGTT.....................................................................................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................ATGGTAGCAAGGCTGAC...................1711.001000000000000000000000000000000000000000000000000000000000000001
...................AATCAGATGTTAGTCCAACTGGCT........................................................................................................................................................2411.001000000000000000000000000000000000000000000100000000000000000000
droMoj3
C---AGATTTTGAGGTCGGAGTCGGATGTTGGACCCGAAAACTTCAATTATGCGTAAGTGTTCAT-C-AAT-ACCAT-A--GT--TGATA--------TTATTTACTAATC-CTTT-TTA----------T-TTCCTTTCTGCAGTTTTGAGACATCCGATGGTACTGCAGCCCAAGCTCAGGGCCAGCTGAATASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........GAGGTCGGAGTCGGATGTTGGACCC...............................................................................................................................................................2511.001000010
droGri2
G---AAATTGTGCGACACGATTCTGAGGTCGGGCCCGAAGGCTACAAATTTGCGTAAGTAATTAA-C-ATTTAGAG-AGA-GT--TACTA--------TAATTTTCTCATA-CGTT-TGTTTTTTTCAACTACTACTTACTTCAGTGTGGAGACTTCCGATGGTACCAGCAAACACGAAGAGGGTCACCTTAAGGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 10:52 PM