ID:

der_730

 Coordinate:

scaffold_4784:5315585-5315679 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-18.4 -18.3 -18.3 -18.2

Flybase annnotation

exon [dere_GLEANR_15172:8]; CDS [Dere\GG15062-cds]; exon [dere_GLEANR_15172:9]; CDS [Dere\GG15062-cds]; intron [Dere\GG15062-in]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------------------------------------------##################################################
GCATCGTTAAGCTGGAGACCATCAAGAAGTCCTTGGAAGTCGAAGTCAAGGTGGGTGCTTTGGGATATAGATTGGCTTCTATATTTGTATATTTTATTACCTATCTGCTACTATACGACTCTACCAACTTCTGCAATCCACCCAGAACTTGTCCATCCGCTTGGAGGAGGTCGAGCTGAACGCCGTCGCCGGCAG
**************************************************.((((.......((((.((((((((.........(((((((....................))))))).....))))..))))..)))).)))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total M055
female body
 V107
male body		 M057
embryo
 V040
embryo
 V108
head
.............................................................................................................................AACTTCTGCAATCCACCCAGTT................................................ 22 2 1 12.00 12 9 1 0 1 1
.............................................................................................................................AACTTCTGCAATCCACCCAGT................................................. 21 1 1 2.00 2 1 0 0 0 1
.............................................................................................................................AACTTCTGCAATCCACCCAGTA................................................ 22 1 1 2.00 2 2 0 0 0 0
.............................................................................................................................AACTTCTGCAATCCACCCAG.................................................. 20 0 1 2.00 2 2 0 0 0 0
..................................................................................................................................................ACTTGTCCATCCGCTTGGAGGAGGT........................ 25 0 1 1.00 1 0 1 0 0 0
.............................................................................................................................AACTTCTGCAATCCACCCAGCA................................................ 22 1 1 1.00 1 1 0 0 0 0
.........................................................................................................................TACCAACTTCTGCAATCCACC..................................................... 21 0 1 1.00 1 1 0 0 0 0
................................TTGGAAGTCGAAGTCAAGA................................................................................................................................................ 19 1 1 1.00 1 0 1 0 0 0
.....................................................................................................................................................TGTCCATCCGCTTGGAGGAGGTCGAGCT.................. 28 0 1 1.00 1 0 1 0 0 0
..................................................................................................................................................ACTTGTCCATCCGCTTGGAGGAGGG........................ 25 1 1 1.00 1 0 1 0 0 0
...........................................................................................................................................................................CGAGCTGAACGCCGTCGCCGGCA. 23 0 1 1.00 1 1 0 0 0 0
............................................................................................................................CAACTTCTGCAATCCACCCAGT................................................. 22 1 1 1.00 1 0 0 1 0 0
.........................GAAGTCCTTGGAAGTCGAAG...................................................................................................................................................... 20 0 1 1.00 1 0 1 0 0 0
.............................................................................................................................AACTTCTGCAATCCACCCAGA................................................. 21 0 1 1.00 1 1 0 0 0 0
GCATCGTTAAGCTGGAGA................................................................................................................................................................................. 18 0 1 1.00 1 0 0 0 1 0
..........................AAGTCCTTGGAAGTCGAAGTCAAGA................................................................................................................................................ 25 1 1 1.00 1 0 1 0 0 0
..............................................................................................................................................................GCTTGGAGGAGGTCGAGCTGAACGCC........... 26 0 1 1.00 1 0 1 0 0 0
.....GTTAAGCTGGAGACCATCAAGAAGTCCT.................................................................................................................................................................. 28 0 1 1.00 1 0 0 1 0 0
.........................................................................................................................TACCAACTTCTGCAATCCACCT.................................................... 22 1 1 1.00 1 1 0 0 0 0
..................................................GGGGGTGCTTTGGGATATAGATTGGCTT..................................................................................................................... 28 1 1 1.00 1 0 0 1 0 0
............TGGAGACCATCAAGAAGTC.................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0
.........AGCTGGAGACCATCAAGAAGTCCT.................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0
..ATCGTTAAGCTGGAGACCA.............................................................................................................................................................................. 19 0 1 1.00 1 0 1 0 0 0
..................................................GTGGGTGCTTTGGGATATAGATTGG........................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0
............................................................................................................................................................CCGCTTGGAGGAGGTCGAGCC.................. 21 1 1 1.00 1 0 0 1 0 0
..................................................GTGGGTGCTTTGGGATATAG............................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0
..............................................................................................................................ACTTCTGCAATCCACCCAGAA................................................ 21 0 1 1.00 1 1 0 0 0 0
...........CTGGAGACCATCAAGAAGT..................................................................................................................................................................... 19 0 1 1.00 1 0 0 0 1 0
GCATCGTTAAGCTGTAGA................................................................................................................................................................................. 18 1 1 1.00 1 0 0 0 1 0
..................................GGAAGTCGAAGGCAAGCTGCGT........................................................................................................................................... 22 3 2 1.00 2 0 2 0 0 0
..................................................GTGGGTGCTTTGGGATATAGA............................................................................................................................ 21 0 1 1.00 1 0 0 0 0 1
.............................................................................................................................................CAAGAACTTGTCCATCCGC................................... 19 1 1 1.00 1 0 0 1 0 0
...............................................................................................................................CTTCTGCAATCCACCCAGTT................................................ 20 2 2 0.50 1 1 0 0 0 0
.............................................................................................................................ATCTTCTGCAATCCACCCAGTT................................................ 22 3 2 0.50 1 0 0 1 0 0
...................................GAAGTCGAAGGCAAGCTGCGT........................................................................................................................................... 21 3 4 0.25 1 1 0 0 0 0
.................................................................................................................................................................GGGACGAGGTCGAGCTGA................ 18 2 8 0.13 1 1 0 0 0 0

Anti-sense strand reads

CGTAGCAATTCGACCTCTGGTAGTTCTTCAGGAACCTTCAGCTTCAGTTCCACCCACGAAACCCTATATCTAACCGAAGATATAAACATATAAAATAATGGATAGACGATGATATGCTGAGATGGTTGAAGACGTTAGGTGGGTCTTGAACAGGTAGGCGAACCTCCTCCAGCTCGACTTGCGGCAGCGGCCGTC
**************************************************.((((.......((((.((((((((.........(((((((....................))))))).....))))..))))..)))).)))).************************************************** 		Read size # Mismatch Hit Count Total Norm Total V107
male body
.............................................................................................................................................................................TCGATTTGAGGCAGCGGCT... 19 3 10 0.10 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4784:5315535-5315729 + der_730 GCATCGT-TAAGCTGGAGACCATCAAGAAGTCCTTGGAAGTCGAAGTCAAGGTGGGTGC-----------TTTGGGA--T-------------AT------------------AG---ATTGG-----------C-----TTCT--ATATTTGTAT----------ATTTTATTACCTATCTGCTACTATACGACTC----------TACCAACTTCT--------GCAATC---C--ACCCAGAACTTGTCCATCCGCTTGGAGGAGGTCGAGCTGAACGCCGTCGCCGGCAG
droYak3 3L:3183095-3183304 + GCATCGT-GAAGCTGGAGACCATCAAGAAGTCCTTGGAAGTCGAAGTCAAGGTGCGTATCTGGG-----TTTTTGGC--T-------------ATC-------ACTAA------------CTT-----------T-----CACTGGG----T-TACATTTGCTTCTATTCTACTACCTATCTGGTGCTATATGACTC----------TACCCATTTT---------GTAATCC--G--CTCCAGAACTTGTCCATCCGCTTGGAGGAGGTCGAGCTGAACGCCGTCGCCGGCAG
droSec2 scaffold_0:1004910-1005087 - GCATCGTTTAAGCTGGAGACCATCAAGAAGTCCTTGGAAGTCGAAGTCAAGGTGCGTGTTTGGG-----TTT-AGGA--T--------------------------------------------------------------------------AA----------AATTTACTACGTATCTGGTACTATATGACTC-----------ACGAACTTTG--------GCTATCT--C--CCCCAGAACTTGT-CATCCGCTTGGAGGAGGTCGAGCTGAGCGCGGTCGCAGGCGG
droSim2 3l:8516693-8516871 - dsi_13307 GCATCGT-TAAGCTGGAGACCATCAAGAAGTCCTTGGAAGTCGAAGTCAAGGTGGGTGTTTGGG-----TTTTGGGA--T--------------------------------------------------------------------------AA----------AATTTACTACGTATCTGGTACTATATGAGTC----------CACGAACTTT---------GCTATCT--C--CCCCAGAACTTGTCCATCCGCTTGGAGGAGGTCGAGCTGAACGCCGTCGCCGGCAG
dm3 chr3L:8727181-8727389 - GCATCGT-TAAGCTGGAGACCATCAAGAAGTCCTTGGAAGTCGAAGTCAAGGTGGGTGTTTGGG-----TTTTGGGA--C-------------ATCTA-TCTAACTAA------------TAT---T-------T-----CATAGGG----A-TAA----------AACTTACTACCTATCTGGTACTATATGACTC----------AACGAACCTT---------GCAATCTCTC--CCGCAGAACTTGTCCATCCGCTTGGAGGAGGTCGAGCTGAACGCCGTCGCCGGCAG
droEug1 scf7180000408961:359232-359331 + ATGCCCA-GACCCAGGAGAAATTGAGGAAGGCCCTCGAGCAGCAGATCAAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTGCAGGTCCGTCTTGACGAGGCCGAGGCCAACGCCCTCAAGGGAGG
droBia1 scf7180000301468:954202-954301 + ATGCCCA-GACCCAGGAGAAATTGAGGAAGGCCCTCGAGCAGCAGATCAAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACTGCAGGTCCGTTTGGACGAGGCCGAGGCCAACGCCCTCAAGGGAGG
droTak1 scf7180000415914:532873-532972 + ATGCCCA-GACCCAGGAGAAATTGAGGAAGGCCCTCGAGCAGCAGATCAAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTGCAGGTCCGTCTCGACGAGGCCGAGGCCAATGCCCTCAAGGGTGG
droEle1 scf7180000490579:556560-556659 - ATGCCCA-GACCCAGGAGAAGCTGAGGAAGGCCCTCGAGCAGCAGATCAAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTGCAGGTCCGTTTGGACGAGGCCGAGGCCAACGCCCTTAAGGGAGG
droRho1 scf7180000780103:196198-196297 - ATGCCCA-GACCCAGGAGAAATTGAGGAAGGCCCTCGAGCAGCAGATCAAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTGCAGGTCCGTTTGGACGAGGCCGAGGCCAACGCCCTCAAGGGAGG
droFic1 scf7180000454078:713310-713409 + ATGCCCA-GACCCAGGAGAAGTTGAGGAAGGCCCTCGAGCAGCAGATCAAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTGCAGGTCCGTCTGGACGAGGCCGAGGCCAACGCCCTCAAGGGTGG
droKik1 scf7180000302474:239666-239865 + GCATCGT-GAAGCTGGAGACCATCAAGAAGTCCTTGGAAGTCGAAGTCAAGGTACCAA----GT------------C--A-------------AACAATTCT----AAATTATAC---ATTAC------------AACA---------------------CTTTCCCATTTCTTATCCATTTAATATCAT-----------TTATTCTCC-------GTTTAATCCCAAATCC--C--CTGTAGAACTTGTCCATCCGCTTGGAGGAGGTCGAGCTGAACGCCGTCGCCGGCAG
droAna3 scaffold_13337:7913296-7913450 + GCATTGT-CAAGCTGGAGACCATCAAGAAGTCTTTGGAAGTCGAAGTCAAGGTGAGATA--AT--C-----------------------AGAAAAATA--------------TGTAGTATTTCACAGCTAATCC--------------------------------------------------------------------------------------------TTTGTC---C--GTCCAGAACTTGTCCATCCGCTTGGAGGAGGTCGAGCTGAACGCCGTTGCCGGCAG
droBip1 scf7180000396541:69603-69757 + GCATTGT-CAAGCTGGAGACCATCAAGAAGTCTTTGGAAGTCGAAGTCAAGGTAAGCTT--AT--G-----------------------AGAAATCTA--------------TGTAGAGTTACCCACTTAATCC--------------------------------------------------------------------------------------------GTTGTC---C--GTCTAGAACTTGTCCATCCGCTTGGAGGAGGTCGAGCTGAACGCCGTTGCCGGCAG
dp5 XR_group8:8863429-8863601 + GCATTGT-CAAGCTCGAGACCATCAAGAAGTCGTTGGAAGTCGAAGTCAAGGTAAGCGT--GTA-----CTTTGGGA--CTATC-------------------------TTGGAC---ATTCC------------AACATTAC--------------------------T--------------AA-----------TCGTTTAT-GTGT-------GTTTAAT-------T---C--GATTAGAACTTGTCCATTCGTCTGGAAGAGGTTGAGCTGAATGCCGTTGCCGGCAG
droPer2 scaffold_50:342698-342870 - GCATTGT-CAAGCTCGAGACCATCAAGAAGTCTTTGGAAGTCGAAGTCAAGGTAAGCGT--GTA-----CTTTGGGA--CTATC-------------------------TTGGAC---ATTCC------------AACATTAC--------------------------T--------------TA-----------TCGTTTAT-GTGT-------GTTTGAT-------T---C--GATTAGAACTTGTCCATTCGTCTGGAAGAGGTTGAGCTGAATGCCGTTGCCGGCAG
droWil2 scf2_1100000004511:8131054-8131226 + GCATTGT-TAAGCTGGAAACCATCAAGAAGTCTTTGGAAGTCGAAGTCAAGGTAAGTTT--ACC-----TTA-CACACAACATTC----------------------------ACTGTATCTC------------AATCTCA----------------------------------------------------TTCTCCTTTTT-CTCT-------TTCTCGC-------C---C--TGTTAGAACTTGTCCATTCGCCTGGAGGAGGTTGAGCTGAATGCCGTTGCTGGTAG
droVir3 scaffold_13049:6388714-6388887 - dvi_18646 GCAGCAT-CAAGCTGGAGACCATCAAGAAGTCTTTGGAAGTCGAAGTCAAGGTAAGCGAC--AA-----CT-------------CACTGCGAGATCAATGCA----AAAGTAGATAATATGT---------------------------------------------------------------------TGATAC----------CATGCACATT-------------TC---CATGCACAGAACTTGTCCATTCGCCTGGAGGAAGTGGAGTTGAACGCCGTTGCCGGTAG
droMoj3 scaffold_6680:4709353-4709519 - GCTGCGT-CAAGCTGGAGACCATCAAGAAGTCTTTGGAAGTCGAAGTCAAGGTAGGCGCC-AGACGAAAAC-----------TC-------------------------TTAAAT---ATTCT---C-------T-----TAC--------------------------------------------TATAT----------------ATGTATATC---------GTTATCTTCC--GCACAGAACTTGTCCATTCGCCTGGAGGAAGTTGAGCTGAACGCCGTTGCCGGTAG
droGri2 scaffold_15110:6353759-6353923 + GCATTGT-CAAGCTGGAGACCATCAAGAAGTCATTGGAAGTCGAAGTCAAGGTATGT--CCAGA-----TCTCTGAT--C----------------------AATTAA------------TCT---C-------T-----TAT-AGA----T-TAA-------------------------------------ACTA----------CACCC--------------ATTATC---CATCCATAGAACTTGTCCATTCGCTTGGAGGAAGTGGAGCTGAACGCTGTTGCCGGTAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
GCATCGT-TAAGCTGGAGACCATCAAGAAGTCCTTGGAAGTCGAAGTCAAGGTGGGTGC-----------TTTGGGA--T-------------AT------------------AG---ATTGG-----------C-----TTCT--ATATTTGTAT----------ATTTTATTACCTATCTGCTACTATACGACTC----------TACCAACTTCT--------GCAATC---C--ACCCAGAACTTGTCCATCCGCTTGGAGGAGGTCGAGCTGAACGCCGTCGCCGGCAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................................................................AACTTCT--------GCAATC---C--ACCCAGTT................................................22112.00129001110
...................................................................................................................................................................................................................AACTTCT--------GCAATC---C--ACCCAGT.................................................2112.0021000010
...................................................................................................................................................................................................................AACTTCT--------GCAATC---C--ACCCAG..................................................2012.0022000000
.....................................................................................................................................................................................................................................................ACTTGTCCATCCGCTTGGAGGAGGT........................2511.0010000100
...............................................................................................................................................................................................................TACCAACTTCT--------GCAATC---C--ACC.....................................................2111.0011000000
.................................TTGGAAGTCGAAGTCAAGA..................................................................................................................................................................................................................................................1911.0010000100
........................................................................................................................................................................................................................................................TGTCCATCCGCTTGGAGGAGGTCGAGCT..................2811.0010000100
.....................................................................................................................................................................................................................................................ACTTGTCCATCCGCTTGGAGGAGGG........................2511.0010000100
..............................................................................................................................................................................................................................................................................CGAGCTGAACGCCGTCGCCGGCA.2311.0011000000
..................................................................................................................................................................................................................CAACTTCT--------GCAATC---C--ACCCAGT.................................................2211.0010100000
..........................GAAGTCCTTGGAAGTCGAAG........................................................................................................................................................................................................................................................2011.0010000100
...................................................................................................................................................................................................................AACTTCT--------GCAATC---C--ACCCAGA.................................................2111.0011000000
GCATCGT-TAAGCTGGAGA...................................................................................................................................................................................................................................................................................1811.0010001000
...........................AAGTCCTTGGAAGTCGAAGTCAAGA..................................................................................................................................................................................................................................................2511.0010000100
.................................................................................................................................................................................................................................................................GCTTGGAGGAGGTCGAGCTGAACGCC...........2611.0010000100
.....GT-TAAGCTGGAGACCATCAAGAAGTCCT....................................................................................................................................................................................................................................................................2811.0010100000
...............................................................................................................................................................................................................TACCAACTTCT--------GCAATC---C--ACCT....................................................2211.0011000000
.............TGGAGACCATCAAGAAGTC......................................................................................................................................................................................................................................................................1911.0010100000
..........AGCTGGAGACCATCAAGAAGTCCT....................................................................................................................................................................................................................................................................2411.0010000100
..ATCGT-TAAGCTGGAGACCA................................................................................................................................................................................................................................................................................1911.0010000100
...................................................GTGGGTGC-----------TTTGGGA--T-------------AT------------------AG---ATTGG-----------................................................................................................................................................................2511.0010000100
...............................................................................................................................................................................................................................................................CCGCTTGGAGGAGGTCGAGCC..................2111.0010100000
...................................................GTGGGTGC-----------TTTGGGA--T-------------AT------------------AG---................................................................................................................................................................................2011.0010000100
....................................................................................................................................................................................................................ACTTCT--------GCAATC---C--ACCCAGAA................................................2111.0011000000
............CTGGAGACCATCAAGAAGT.......................................................................................................................................................................................................................................................................1911.0010001000
...................................................GTGGGTGC-----------TTTGGGA--T-------------AT------------------AG---A...............................................................................................................................................................................2111.0010000010
.....................................................................................................................................................................................................................CTTCT--------GCAATC---C--ACCCAGTT................................................2020.5011000000
droYak3
GCATCGT-GAAGCTGGAGACCATCAAGAAGTCCTTGGAAGTCGAAGTCAAGGTGCGTATCTGGG-----TTTTTGGC--T-------------ATC-------ACTAA------------CTT-----------T-----CACTGGG----T-TACATTTGCTTCTATTCTACTACCTATCTGGTGCTATATGACTC----------TACCCATTTT---------GTAATCC--G--CTCCAGAACTTGTCCATCCGCTTGGAGGAGGTCGAGCTGAACGCCGTCGCCGGCAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................GACCATCAAGAAGTCCTTGGAAGT.............................................................................................................................................................................................................................................................24115.0015000000000015
.....................................................................................................................................................................................................................................................ACTTGTCCATCCGCTTGGAGGAGGTCGAGCT..................31110.0010000000000010
........................................................................................................................................................................................................................................................TGTCCATCCGCTTGGAGGAGGTCG......................2419.00900000000009
.............................GTCCTTGGAAGTCGAAGTCAAGA..................................................................................................................................................................................................................................................2312.00202000000000
.........................................................................................................................................................................................................................................................GTCCATCCGCTTGGAGGAGGTCGAGCT..................2711.00100100000000
....................................................................................................................................................................................................................................................................TGGAGGAGGTCGAGCTGAACGCCGTCGCC.....2911.00110000000000
.....GT-GAAGCTGGAGACCATCAAG...........................................................................................................................................................................................................................................................................2111.00101000000000
...............................................................................................................................................................................................................................................................CCGCTTGGAGGAGGTCGAGCT..................2111.00100000010000
.........................................................................................................................................................................................................................................................GTCCATCCGCTTGGAGGAGG.........................2011.00101000000000
........................................................................................................................................................................................................................................................................GGAGGTCGAGCTGAACGCCGTCGCC.....2511.00101000000000
.....GT-GAAGCTGGAGACCATCA.............................................................................................................................................................................................................................................................................1911.00101000000000
..................................................................................................................................................................................................................................................................CTTGGAGGAGGTCGAGCTGAACGCC...........2511.00100010000000
.............................................................................................................................................................................................................................................................ATCCGCTTGGAGGAGGTCG......................1911.00101000000000
.................................................................................................................................................................................................................................................................GCTTGGAGGAGGTCGAGCTG.................2011.00101000000000
........GAAGCTGGAGACCATCAAGAA.........................................................................................................................................................................................................................................................................2111.00101000000000
...TCGT-GAAGCTGGAGACCATCAAG...........................................................................................................................................................................................................................................................................2311.00101000000000
..............................................................................................................................................................................................................................................................TCCGCTTGGAGGAGGTCGAGC...................2111.00101000000000
...........................................................................................................................................................................................................................................................CCATCCGCTTGGAGGAGGTCGAGC...................2411.00101000000000
........................................................................................................................................................................................................................................................TGTCCATCCGCTTGGAGGAGGT........................2211.00101000000000
.........................AGAAGTCCTTGGAAGTCGAAGTCAAGA..................................................................................................................................................................................................................................................2711.00101000000000
............................................................................................................................................................................................................................................................................GTCGAGCTGAACGCCGTCGCCGGCA.2511.00100100000000
...............................CCTTGGAAGTCGAAGTCAAG...................................................................................................................................................................................................................................................2011.00101000000000
............................................................................................................................................................................................................................................................................GTCGAGCTGAACGCCGTCGCC.....2111.00100100000000
droSec2
GCATCGTTTAAGCTGGAGACCATCAAGAAGTCCTTGGAAGTCGAAGTCAAGGTGCGTGTTTGGG-----TTT-AGGA--T--------------------------------------------------------------------------AA----------AATTTACTACGTATCTGGTACTATATGACTC-----------ACGAACTTTG--------GCTATCT--C--CCCCAGAACTTGT-CATCCGCTTGGAGGAGGTCGAGCTGAGCGCGGTCGCAGGCGGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
............................AGTCCTTGGAAGTCGAAGTCA.....................................................................................................................................................................................................................................................2111.0011000
.............................GTCCTTGGAAGTCGAAGTCAAGA..................................................................................................................................................................................................................................................2311.0010010
........................AAGAAGTCCTTGGAAGTCGAAGT.......................................................................................................................................................................................................................................................2311.0010010
...............GAGACCATCAAGAAGTCCTTGGAAGT.............................................................................................................................................................................................................................................................2611.0010001
...........................AAGTCCTTGGAAGTCGAAGTCAAGAA.................................................................................................................................................................................................................................................2611.0010100
.....................ATCAAGAAGTCCTTGGAAGTCGAAGTC......................................................................................................................................................................................................................................................2711.0010100
............................AGTCCTTGGAAGTCGAAGTCAAGA..................................................................................................................................................................................................................................................2411.0010010
.......TTAAGCTGGAGACCATCAAGA..........................................................................................................................................................................................................................................................................2111.0010010
.....................ATCAAGAAGTCCTTGGAAGTCG...........................................................................................................................................................................................................................................................2211.0011000
droSim2
GCATCGT-TAAGCTGGAGACCATCAAGAAGTCCTTGGAAGTCGAAGTCAAGGTGGGTGTTTGGG-----TTTTGGGA--T--------------------------------------------------------------------------AA----------AATTTACTACGTATCTGGTACTATATGAGTC----------CACGAACTTT---------GCTATCT--C--CCCCAGAACTTGTCCATCCGCTTGGAGGAGGTCGAGCTGAACGCCGTCGCCGGCAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..............................................................................................................................................................................................................................................................................CGAGCTGAACGCCGTCGCC.....1923.00600600000000000000
..............................................................................................................................................................................................ATGAGTC----------CACGAACTTT---------GCTATCT--C--C.......................................................2611.00100100000000000000
........................AAGAAGTCCTTGGAAGTCGAAG........................................................................................................................................................................................................................................................2221.00200100000000001000
GCATCGT-TAAGCTGGAGACC.................................................................................................................................................................................................................................................................................2011.00100100000000000000
................................................................................................................................................................................................................................................................................AGCTGAACGCCGTCGCCGGCA.2111.00100100000000000000
...........................................................................................................................................................................................................................................................................GGTCGAGCTGAACGCCGTC........1921.00200200000000000000
.CATCGT-TAAGCTGGAGACC.................................................................................................................................................................................................................................................................................1911.00110000000000000000
..............................................................................................................................................................................................................................................................................CGAGCTGAACGCCGTCGCCGGCG.2311.00100100000000000000
.........................................................................................................................................................................................................................................................................GAGGTCGAGCTGAACGCC...........1821.00200200000000000000
............................................................................................................................................................................................................................................................................GTCGAGCTGAACGCCGTCGCC.....2120.50100100000000000000
........................................................................................................................................................................................................................................................TGTCCATCCGCTTGGAGGAGGTCGAGCT..................2820.50100100000000000000
.................................................................................................................................................................................................................................................................GCTTGGAGGAGGTCGAGCTGAACGCC...........2620.50110000000000000000
......................................................................................................................................................................................................................................................CTTGTCCATCCGCTTGGAGGAGGTCGA.....................2720.50100010000000000000
........................................................................................................................................................................................................................................................................GGAGGTCGAGCTGAACG.............1720.50100000000001000000
......................................................................................................................................................................................................................................................................GAGGAGGTCGAGCTGAACGCCGTCGCC.....2720.50101000000000000000
dm3
GCATCGT-TAAGCTGGAGACCATCAAGAAGTCCTTGGAAGTCGAAGTCAAGGTGGGTGTTTGGG-----TTTTGGGA--C-------------ATCTA-TCTAACTAA------------TAT---T-------T-----CATAGGG----A-TAA----------AACTTACTACCTATCTGGTACTATATGACTC----------AACGAACCTT---------GCAATCTCTC--CCGCAGAACTTGTCCATCCGCTTGGAGGAGGTCGAGCTGAACGCCGTCGCCGGCAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....GT-TAAGCTGGAGACCATCAAG...........................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000300000000000000000000000000000000000000000000000000000000
...........................AAGTCCTTGGAAGTCGAA.........................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................ATCCGCTTGGAGGAGGTCGAGCT..................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................GCTTGGAGGAGGTCGAGC...................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000100000
.........................AGAAGTCCTTGGAAGTCG...........................................................................................................................................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.............................GTCCTTGGAAGTCGAAGTCAAGAA.................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AGTCCTTGGAAGTCGAAGTCAAGA..................................................................................................................................................................................................................................................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
..............................................................................................................................................................................................................................................................................CGAGCTGAACGCCGTCGCC.....1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ATCAAGAAGTCCTTGGAAGTCGAAGTC......................................................................................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................GTCGAGCTGAACGCCGTCGCC.....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TTGGAAGTCGAAGTCAAGGTGGGT.............................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
.............................GTCCTTGGAAGTCGAAGTCAAGA..................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................CTTGTCCATCCGCTTGGAGGAGGTC.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...TCGT-TAAGCTGGAGACCATCA.............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CATCGT-TAAGCTGGAGACCATCA.............................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................CGCTTGGAGGAGGTCGAG....................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................AGCTGAACGCCGTCGCCGGCA.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................TTGTCCATCCGCTTGGAGGAGGTCG......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................CGAGCTGAACGCCGTCGCCGGC..2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................GTGGGTGTTTGGG-----TTTTGGGA--C-------------.........................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AGTCCTTGGAAGTCGAAGTC......................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
..................................................................................................................................................................................................................................................AGAACTTGTCCATCCGCTTGGAGGAG..........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................GAACTTGTCCATCCGCTTGGAGGAGGT........................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................GGAGGTCGAGCTGAACGC............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................TTGGAAGTCGAAGTCAAG...................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AGAAGTCCTTGGAAGTCGAAGTCAAGA..................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................CATCAAGAAGTCCTTGGAAGTC............................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................TGGAGGAGGTCGAGCTGAAC..............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CATCGT-TAAGCTGGAGACC.................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GAAGTCCTTGGAAGTCGAAGTC......................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................GAGGTCGAGCTGAACGCCTC.........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AAGCTGGAGACCATCAAGA..........................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GT-TAAGCTGGAGACCAT...............................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..ATCGT-TAAGCTGGAGACCATCA.............................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................TTGTCCATCCGCTTGGAGGAGGTT.......................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................ATCCGCTTGGAGGAGGTCG......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................ACTTGTCCATCCGCTTGGAGGAGGT........................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................ATCAAGAAGTCCTTGGAAGTCGAATC.......................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GCTGGAGACCATCAAGAAG........................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................AGTCCTTGGAAGTCGAAGTCA.....................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................CTTGGAAGTCGAAGTCAAG...................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.....GT-TAAGCTGGAGACCATCA.............................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................AGAAGTCCTTGGAAGTCGAAGTC......................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................GAAGTCCTTGGAAGTCGAA.........................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....CGT-TAAGCTGGAGACCATCAAG...........................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................AGGTCGAGCTGAACGCCGTCGCCGG...2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................AGGAGGTCGAGCTGAACGCC...........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................CTTGTCCATCCGCTTGGAGGAGGT........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GT-TAAGCTGGAGACCATC..............................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................AGGAGGTCGAGCTGAACGCCGT.........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AAGAAGTCCTTGGAAGTCGAAGTC......................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................GGAGGTCGAGCTGAACGCCGTCG.......2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TGGAAGTCGAAGTCAAGA..................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........AAGCTGGAGACCATCAAGAAGTCCT....................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...TCGT-TAAGCTGGAGACCATC..............................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................................................................................................................................................................................GGTCGAGCTGAACGCCGTCGCC.....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................AAGAAGTCCTTGGAAGTCGAAGTCAAGA..................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................................................................................................................................................................TGGAGGAGGTCGAGCTGAACGATC..........2420.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................CATAGGG----A-TAA----------AACTTAGA........................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
..................................TGGAAGTCGAAGTCAAGAA.................................................................................................................................................................................................................................................1930.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
............................................................................................................................................CATAGGG----A-TAA----------AACTTATA........................................................................................................................1950.2010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
droEug1
ATGCCCA-GACCCAGGAGAAATTGAGGAAGGCCCTCGAGCAGCAGATCAAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTGCAGGTCCGTCTTGACGAGGCCGAGGCCAACGCCCTCAAGGGAGGSizeHit CountTotal NormTotal
No Reads
droBia1
ATGCCCA-GACCCAGGAGAAATTGAGGAAGGCCCTCGAGCAGCAGATCAAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AACTGCAGGTCCGTTTGGACGAGGCCGAGGCCAACGCCCTCAAGGGAGGSizeHit CountTotal NormTotal
No Reads
droTak1
ATGCCCA-GACCCAGGAGAAATTGAGGAAGGCCCTCGAGCAGCAGATCAAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTGCAGGTCCGTCTCGACGAGGCCGAGGCCAATGCCCTCAAGGGTGGSizeHit CountTotal NormTotal
No Reads
droEle1
ATGCCCA-GACCCAGGAGAAGCTGAGGAAGGCCCTCGAGCAGCAGATCAAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTGCAGGTCCGTTTGGACGAGGCCGAGGCCAACGCCCTTAAGGGAGGSizeHit CountTotal NormTotal
No Reads
droRho1
ATGCCCA-GACCCAGGAGAAATTGAGGAAGGCCCTCGAGCAGCAGATCAAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTGCAGGTCCGTTTGGACGAGGCCGAGGCCAACGCCCTCAAGGGAGGSizeHit CountTotal NormTotal
No Reads
droFic1
ATGCCCA-GACCCAGGAGAAGTTGAGGAAGGCCCTCGAGCAGCAGATCAAGG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGCTGCAGGTCCGTCTGGACGAGGCCGAGGCCAACGCCCTCAAGGGTGGSizeHit CountTotal NormTotal
No Reads
droKik1
GCATCGT-GAAGCTGGAGACCATCAAGAAGTCCTTGGAAGTCGAAGTCAAGGTACCAA----GT------------C--A-------------AACAATTCT----AAATTATAC---ATTAC------------AACA---------------------CTTTCCCATTTCTTATCCATTTAATATCAT-----------TTATTCTCC-------GTTTAATCCCAAATCC--C--CTGTAGAACTTGTCCATCCGCTTGGAGGAGGTCGAGCTGAACGCCGTCGCCGGCAGSizeHit CountTotal NormTotal
No Reads
droAna3
GCATTGT-CAAGCTGGAGACCATCAAGAAGTCTTTGGAAGTCGAAGTCAAGGTGAGATA--AT--C-----------------------AGAAAAATA--------------TGTAGTATTTCACAGCTAATCC--------------------------------------------------------------------------------------------TTTGTC---C--GTCCAGAACTTGTCCATCCGCTTGGAGGAGGTCGAGCTGAACGCCGTTGCCGGCAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...TTGT-CAAGCTGGAGACCATCAAG...........................................................................................................................................................................................................................................................................2312.002000002
................................TTTGGAAGTCGAAGTCAAGA..................................................................................................................................................................................................................................................2012.002000002
...............................................................................................................................................................................................................................................................CCGCTTGGAGGAGGTCGAGCT..................2111.001100000
....................................................................................................................................................................................................................................................................TGGAGGAGGTCGAGCTGAACG.............2111.001100000
...............................................................................................................................................................................................................................................................................GAGCTGAACGCCGTTGCCGGCA.2211.001001000
.........................................................................................................................................................................................................................................................................GAGGTCGAGCTGAACGCCGTTGCC.....2411.001100000
........................................................................................................................................................................................................................................................TGTCCATCCGCTTGGAGGAGGTCGAGCT..................2811.001100000
...................................................................................................................................................................................................................................................................TTGGAGGAGGTCGAGCTGAA...............2011.001100000
............................................................................................................................................................................................................................................................CATCCGCTTGGAGGAGGTCGAGCTG.................2511.001010000
...........................................................................................................................................................................................................................................................................GGTCGAGCTGAACGCCGTTGCCGGC..2511.001100000
.....GT-CAAGCTGGAGACCATCAA............................................................................................................................................................................................................................................................................2011.001100000
...................CCATCAAGAAGTCTTTGGAAG..............................................................................................................................................................................................................................................................2111.001001000
GCATTGT-CAAGCTGGAGACCATCAAGA..........................................................................................................................................................................................................................................................................2711.001010000
..........................................................................................................................................................................................................................................................................AGGTCGAGCTGAACGCCGTTGCC.....2311.001100000
..ATTGT-CAAGCTGGAGACCATC..............................................................................................................................................................................................................................................................................2111.001001000
........................AAGAAGTCTTTGGAAGTC............................................................................................................................................................................................................................................................1811.001010000
.........................AGAAGTCTTTGGAAGTCGAAGT.......................................................................................................................................................................................................................................................2211.001000001
...........................................................................................................................................................................................................................................................................GGTCGAGCTGAACGCCGTTGCCGGCA.2611.001010000
......................................................................................................................................................................................................................................................................GAGGAGGTCGAGCTGAACGC............2011.001000100
..............................................................................................................................................................................................................................................................................CGAGCTGAACGCCGTTGCCGGC..2211.001010000
....TGT-CAAGCTGGAGACCATCAA............................................................................................................................................................................................................................................................................2111.001100000
.................GACCATCAAGAAGTCTTTGGAAGTCG...........................................................................................................................................................................................................................................................2611.001010000
..................................................................................................................................................................................................................................................AGAACTTGTCCATCCGCTT.................................1911.001001000
GCATTGT-CAAGCTGGAGACCATC..............................................................................................................................................................................................................................................................................2311.001100000
..............................................................................................................................................................................................................................................................TCCGCTTGGAGGAGGTCG......................1811.001100000
....................CATCAAGAAGTCTTTGGAAGT.............................................................................................................................................................................................................................................................2111.001001000
........................................................................................................................................................................................................................................................TGTCCATCCGCTTGGAGGAGGTCGAGC...................2711.001000001
.......................................................................................................................................................................................................................................................TTGTCCATCCGCTTGGAGGAGGTCGA.....................2611.001010000
..............................................................................................................................................................................................................................................................TCCGCTTGGAGGAGGTCGAGC...................2111.001000010
droBip1
GCATTGT-CAAGCTGGAGACCATCAAGAAGTCTTTGGAAGTCGAAGTCAAGGTAAGCTT--AT--G-----------------------AGAAATCTA--------------TGTAGAGTTACCCACTTAATCC--------------------------------------------------------------------------------------------GTTGTC---C--GTCTAGAACTTGTCCATCCGCTTGGAGGAGGTCGAGCTGAACGCCGTTGCCGGCAGSizeHit CountTotal NormTotal
No Reads
dp5
GCATTGT-CAAGCTCGAGACCATCAAGAAGTCGTTGGAAGTCGAAGTCAAGGTAAGCGT--GTA-----CTTTGGGA--CTATC-------------------------TTGGAC---ATTCC------------AACATTAC--------------------------T--------------AA-----------TCGTTTAT-GTGT-------GTTTAAT-------T---C--GATTAGAACTTGTCCATTCGTCTGGAAGAGGTTGAGCTGAATGCCGTTGCCGGCAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.....................................................................................................................................................................................................................................................................GGAAGAGGTTGAGCTGAAT..............1912.0020200000000
..ATTGT-CAAGCTCGAGACCAT...............................................................................................................................................................................................................................................................................2011.0010100000000
.....................................................................................................................................................................................................................................................................GGAAGAGGTTGAGCTGAATGCCGTTGCC.....2811.0010010000000
.............TCGAGACCATCAAGAAGTC......................................................................................................................................................................................................................................................................1911.0010100000000
.........................AGAAGTCGTTGGAAGTCGA..........................................................................................................................................................................................................................................................1911.0010000000001
.............................................................................................................................................................................................................................................................ATTCGTCTGGAAGAGGTTGAGCTGA................2511.0010000000001
............................................................................................................................................................................................................................................................................GTTGAGCTGAATGCCGTTG.......1911.0010000010000
..............CGAGACCATCAAGAAGTCGTT...................................................................................................................................................................................................................................................................2111.0010100000000
.................................................................................................................................................................................................................................................................GTCTGGAAGAGGTTGAGCTGAAT..............2311.0010010000000
.............................................................................................................................................................................................................................................................ATTCGTCTGGAAGAGGTTGAGCTGAAT..............2711.0010000000001
...........................................................................................................................................................................................................................................................................GGTTGAGCTGAATGCCGTTGCC.....2211.0010100000000
..........................GAAGTCGTTGGAAGTCGAA.........................................................................................................................................................................................................................................................1911.0010100000000
.................GACCATCAAGAAGTCGTTG..................................................................................................................................................................................................................................................................1911.0010100000000
.............................................................................................................................................................................................................................................................................TTGAGCTGAATGCCGTTGCC.....2011.0010100000000
................................................................................................................................................................................................................................................................................AGCTGAATGCCGTTGCCGGC..2011.0010100000000
...................................................................................................................................................................................................................................................................CTGGAAGAGGTTGAGCTGAAT..............2111.0010000000001
......................................................................................................................................................................................................................................................CTTGTCCATTCGTCTGGAAGAGGT........................2411.0010000010000
.........................................................................................................................................................................................................................................................................GAGGTTGAGCTGAATGCCGTTGCC.....2411.0010100000000
...................................................................................................................................................................................................................................................GAACTTGTCCATTCGTCTG................................1911.0010100000000
....................................................................................................................................................................................................................................................................TGGAAGAGGTTGAGCTGAATGCC...........2311.0010100000000
.....................ATCAAGAAGTCGTTGGAAGTC............................................................................................................................................................................................................................................................2111.0010010000000
droPer2
GCATTGT-CAAGCTCGAGACCATCAAGAAGTCTTTGGAAGTCGAAGTCAAGGTAAGCGT--GTA-----CTTTGGGA--CTATC-------------------------TTGGAC---ATTCC------------AACATTAC--------------------------T--------------TA-----------TCGTTTAT-GTGT-------GTTTGAT-------T---C--GATTAGAACTTGTCCATTCGTCTGGAAGAGGTTGAGCTGAATGCCGTTGCCGGCAGSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
............................................................................................................................................................................................................................................................................GTTGAGCTGAATGCCGTTGCC.....2114.004400000
.....................................................................................................................................................................................................................................................ACTTGTCCATTCGTCTGGA..............................1914.004400000
....................................................................................................................................................................................................................................................AACTTGTCCATTCGTCTG................................1814.004400000
............................................................................................................................................................................................................................................................CATTCGTCTGGAAGAGGTT.......................1912.002200000
....................CATCAAGAAGTCTTTGGAAGTC............................................................................................................................................................................................................................................................2212.002200000
............................................................................................................................................................................................................................................................................GTTGAGCTGAATGCCGTTGCCGGCA.2511.001100000
.........................................................................................................................................................................................................................................................GTCCATTCGTCTGGAAGAGGTTGAGCT..................2711.001100000
.....................................................................................................................................................................................................................................................ACTTGTCCATTCGTCTGGG..............................1911.001100000
..................................................................................................................................................................................................................................................AGAACTTGTCCATTCGTCTGG...............................2111.001001000
..................................................................................................................................................................................................................................................AGAACTTGTCCATTCGTCTGGAAGAGGT........................2811.001000001
.........................................................................................................................................................................................................................................................................GAGGTTGAGCTGAATGCCGTTGCC.....2411.001100000
........................AAGAAGTCTTTGGAAGTCGAAGTC......................................................................................................................................................................................................................................................2411.001000001
droWil2
GCATTGT-TAAGCTGGAAACCATCAAGAAGTCTTTGGAAGTCGAAGTCAAGGTAAGTTT--ACC-----TTA-CACACAACATTC----------------------------ACTGTATCTC------------AATCTCA----------------------------------------------------TTCTCCTTTTT-CTCT-------TTCTCGC-------C---C--TGTTAGAACTTGTCCATTCGCCTGGAGGAGGTTGAGCTGAATGCCGTTGCTGGTAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..ATTGT-TAAGCTGGAAACC.................................................................................................................................................................................................................................................................................1813.00330000
.............................GTCTTTGGAAGTCGAAGTC......................................................................................................................................................................................................................................................1912.00220000
......................................................................................................................................................................................................................................................................GAGGAGGTTGAGCTGAATGCC...........2112.00220000
....................................................................................................................................................................................................................................................AACTTGTCCATTCGCCTGGAGG............................2212.00220000
..........................................................................................................................................................................................................TTT-CTCT-------TTCTCGC-------C---C--TGTTAG..................................................2211.00100010
..............................................................................................................................................................................................................................................................................TGAGCTGAATGCCGTTGCT.....1911.00100010
......................TCAAGAAGTCTTTGGAAGTCGAAGTC......................................................................................................................................................................................................................................................2611.00110000
......T-TAAGCTGGAAACCATCAAGA..........................................................................................................................................................................................................................................................................2111.00100100
GCATTGT-TAAGCTGGAAACCATCAAG...........................................................................................................................................................................................................................................................................2611.00100010
.....................................................................................................................................................................................................................................................................GGAGGAGGTTGAGCTGAATGC............2111.00110000
.................AACCATCAAGAAGTCTTTGGA................................................................................................................................................................................................................................................................2111.00100010
...................................................................................................................................................................................................................................................................CTGGAGGAGGTTGAGCTGAATGCC...........2411.00110000
..............................................................................................................................................................................................................................................................TTCGCCTGGAGGAGGTTGAGCTG.................2311.00101000
................AAACCATCAAGAAGTCTTTGGA................................................................................................................................................................................................................................................................2211.00100010
........................AAGAAGTCTTTGGAAGTCGAAGT.......................................................................................................................................................................................................................................................2311.00100100
..................................................................................................................................................................................................................................................AGAACTTGTCCATTCGCCTG................................2011.00101000
....................CATCAAGAAGTCTTTGGA................................................................................................................................................................................................................................................................1811.00100010
..............................................................................................................................................................................................................................................................................TGAGCTGAATGCCGTTGCTGGT..2211.00100010
....................CATCAAGAAGTCTTTGGAAG..............................................................................................................................................................................................................................................................2011.00110000
.............................................................................................................................................................................................................................................................................TTGAGCTGAATGCCGTTGC......1911.00100010
........................AAGAAGTCTTTGGAAGTCGAAGTC......................................................................................................................................................................................................................................................2411.00110000
.........AAGCTGGAAACCATCAAGAAGTCT.....................................................................................................................................................................................................................................................................2411.00110000
...........................................................................................................................................................................................................................................................CCATTCGCCTGGAGGAGGTTGAGC...................2411.00100010
......................................................................................................................................................................................................................................................CTTGTCCATTCGCCTGGAGGA...........................2111.00100010
....................CATCAAGAAGTCTTTGGAAGT.............................................................................................................................................................................................................................................................2111.00100010
...........................AAGTCTTTGGAAGTCGAAGTCAAGAAC................................................................................................................................................................................................................................................2711.00110000
.....................ATCAAGAAGTCTTTGGAAGTC............................................................................................................................................................................................................................................................2111.00110000
......................................................................................................................................................................................................................................................................GAGGAGGTTGAGCTGAATGCCGTTGCT.....2711.00100010
....................CATCAAGAAGTCTTTGGAAGTC............................................................................................................................................................................................................................................................2211.00100010
...................................................................................................................................................................................................................................................GAACTTGTCCATTCGCCTGGAGGAG..........................2511.00110000
.CATTGT-TAAGCTGGAAAC..................................................................................................................................................................................................................................................................................1811.00100010
..ATTGT-TAAGCTGGAAACCATCAAGAA.........................................................................................................................................................................................................................................................................2611.00100010
............................................................................................................................................................................................................................................................................GTTGAGCTGAATGCCGTTGCT.....2111.00110000
..............GGAAACCATCAAGAAGTCTTTGGA................................................................................................................................................................................................................................................................2411.00101000
....TGT-TAAGCTGGAAACCATCAAG...........................................................................................................................................................................................................................................................................2211.00110000
.................AACCATCAAGAAGTCTTTGGAAGTCGAA.........................................................................................................................................................................................................................................................2811.00100010
........TAAGCTGGAAACCATCAAGAAGTCTTTG..................................................................................................................................................................................................................................................................2811.00100100
............................................................................................................................................................................................................................................................................GTTGAGCTGAATGCCGTTGCTGGTA.2511.00100010
droVir3
GCAGCAT-CAAGCTGGAGACCATCAAGAAGTCTTTGGAAGTCGAAGTCAAGGTAAGCGAC--AA-----CT-------------CACTGCGAGATCAATGCA----AAAGTAGATAATATGT---------------------------------------------------------------------TGATAC----------CATGCACATT-------------TC---CATGCACAGAACTTGTCCATTCGCCTGGAGGAAGTGGAGTTGAACGCCGTTGCCGGTAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.................GACCATCAAGAAGTCTTTGGA................................................................................................................................................................................................................................................................2114.004000100000000000003000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................TTGTCCATTCGCCTGGAGGAAGTGGA.....................2612.002000000000000000011000000000000000000000000000000000000000000000
.................GACCATCAAGAAGTCTTTGGAA...............................................................................................................................................................................................................................................................2212.002000000000000000010100000000000000000000000000000000000000000000
......T-CAAGCTGGAGACCATCAAG...........................................................................................................................................................................................................................................................................2012.002002000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................GGAGGAAGTGGAGTTGAACGCCGT.........2412.002020000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................TGGAGTTGAACGCCGTTGCCGGTA.2411.001000000000000000001000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................TTCGCCTGGAGGAAGTGGAG....................2011.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................CTTGTCCATTCGCCTGGAG.............................1911.001000000000000000000000000000000010000000000000000000000000000000
................................................................................................................................................................................................................................................................................AGTTGAACGCCGTTGCCGGT..2011.001000000000000000000000000000000000000000000000000000000000001000
.........................................................................................................................................................................................................................................................................GAAGTGGAGTTGAACGCCGTTGCC.....2411.001001000000000000000000000000000000000000000000000000000000000000
.....................ATCAAGAAGTCTTTGGAA...............................................................................................................................................................................................................................................................1811.001000000000000000000010000000000000000000000000000000000000000000
....CAT-CAAGCTGGAGACCATCAAGA..........................................................................................................................................................................................................................................................................2311.001010000000000000000000000000000000000000000000000000000000000000
........................AAGAAGTCTTTGGAAGTCGAAG........................................................................................................................................................................................................................................................2211.001000000000000000100000000000000000000000000000000000000000000000
..............GGAGACCATCAAGAAGTCTTTGGAAGT.............................................................................................................................................................................................................................................................2711.001000000000000000100000000000000000000000000000000000000000000000
..............GGAGACCATCAAGAAGTC......................................................................................................................................................................................................................................................................1811.001000000000000001000000000000000000000000000000000000000000000000
.........................AGAAGTCTTTGGAAGTCGAAGTC......................................................................................................................................................................................................................................................2311.001010000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................GAGTTGAACGCCGTTGCCGGTA.2211.001000100000000000000000000000000000000000000000000000000000000000
...........................AAGTCTTTGGAAGTCGAAGTCAAGA..................................................................................................................................................................................................................................................2511.001000000000100000000000000000000000000000000000000000000000000000
.........................AGAAGTCTTTGGAAGTCG...........................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000100
..............................................................................................................................................................................................................................................................TTCGCCTGGAGGAAGTGGAGC...................2111.001000000000000001000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................AGAACTTGTCCATTCGCCTGGAGGAAG.........................2711.001000000000000000000100000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................TTCGCCTGGAGGAAGTGGAGTT..................2211.001000000000000000000000000000000000000000000000000000000000000100
.........................................................................................................................................................................................................................................................GTCCATTCGCCTGGAGGAAGTGGAGT...................2611.001000001000000000000000000000000000000000000000000000000000000000
.................GACCATCAAGAAGTCTTTGGAAGT.............................................................................................................................................................................................................................................................2411.001000000000000000010000000000000000000000000000000000000000000000
...........................AAGTCTTTGGAAGTCGAAGTC......................................................................................................................................................................................................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
.....AT-CAAGCTGGAGACC.................................................................................................................................................................................................................................................................................1511.001000000000000000000000000000000000000000000100000000000000000000
....................................................................................................................................................................................................................................................AACTTGTCCATTCGCCTGGA..............................2011.001000000000000000000000000000000000000000000000000000000000001000
.......................................................................................................................................................................................................................................................................AGGAAGTGGAGTTGAACGCCGTTGCC.....2611.001000000000000000001000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................ATTCGCCTGGAGGAAGTG.......................1811.001000000000000000010000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................CATTCGCCTGGAGGAAGT........................1811.001000000000000000001000000000000000000000000000000000000000000000
..............................TCTTTGGAAGTCGAAGTC......................................................................................................................................................................................................................................................1811.001010000000000000000000000000000000000000000000000000000000000000
.....................ATCAAGAAGTCTTTGGAAGTCGAAGTC......................................................................................................................................................................................................................................................2711.001100000000000000000000000000000000000000000000000000000000000000
.....................ATCAAGAAGTCTTTGGAAGT.............................................................................................................................................................................................................................................................2011.001000000000000001000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................GAGGAAGTGGAGTTGAACGCCGTT........2411.001000000000000000001000000000000000000000000000000000000000000000
.........................AGAAGTCTTTGGAAGTCGAA.........................................................................................................................................................................................................................................................2011.001000000000000000000000010000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................CATTCGCCTGGAGGAAGTGGAGTT..................2411.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................AGAACTTGTCCATTCGCCTGGAG.............................2311.001000000000000000000000000000000000000000000000000000000000000100
.........................AGAAGTCTTTGGAAGTCGAAGTCAAG...................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
GCAGCAT-CAAGCTGGAGACC.................................................................................................................................................................................................................................................................................2011.001000100000000000000000000000000000000000000000000000000000000000
..............GGAGACCATCAAGAAGTCTTTGGAAG..............................................................................................................................................................................................................................................................2611.001000000000000000001000000000000000000000000000000000000000000000
.................GACCATCAAGAAGTCTTTGGAAGTC............................................................................................................................................................................................................................................................2511.001000000000000001000000000000000000000000000000000000000000000000
.....AT-CAAGCTGGAGACCATCAAGAAGTC......................................................................................................................................................................................................................................................................2611.001000000000000001000000000000000000000000000000000000000000000000
droMoj3
GCTGCGT-CAAGCTGGAGACCATCAAGAAGTCTTTGGAAGTCGAAGTCAAGGTAGGCGCC-AGACGAAAAC-----------TC-------------------------TTAAAT---ATTCT---C-------T-----TAC--------------------------------------------TATAT----------------ATGTATATC---------GTTATCTTCC--GCACAGAACTTGTCCATTCGCCTGGAGGAAGTTGAGCTGAACGCCGTTGCCGGTAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................................................................................................................................................GTCCATTCGCCTGGAGGAAGT........................2111.001100000
.....GT-CAAGCTGGAGACCATCAAGAAGTC......................................................................................................................................................................................................................................................................2611.001100000
...........................AAGTCTTTGGAAGTCGAAG........................................................................................................................................................................................................................................................1911.001100000
............................................................................................................................................................................................................................................................................GTTGAGCTGAACGCCGTTGCCGGTA.2511.001000001
.................................................................................................................................................................................................................................................................GCCTGGAGGAAGTTGAGCT..................1911.001000001
................................TTTGGAAGTCGAAGTCAAGA..................................................................................................................................................................................................................................................2011.001100000
........................................................................................................................................................................................................................................................TGTCCATTCGCCTGGAGGAAGT........................2211.001100000
.........................................................................................................................................................................................................................................................................GAAGTTGAGCTGAACGCCGT.........2011.001100000
...............GAGACCATCAAGAAGTCTTTGGA................................................................................................................................................................................................................................................................2311.001100000
.................GACCATCAAGAAGTCTTTGGAAGTC............................................................................................................................................................................................................................................................2511.001100000
.....................ATCAAGAAGTCTTTGGAAGT.............................................................................................................................................................................................................................................................2011.001100000
.........................................................................................................................................................................................................................................................................GAAGTTGAGCTGAACGCCGTT........2111.001000001
.....................................................................................................................................................................................................................................................................GGAGGAAGTTGAGCTGAAC..............1911.001000001
............................AGTCTTTGGAAGTCGAAGTCAAGA..................................................................................................................................................................................................................................................2411.001100000
..............................................................................................................................................................................................................................................................TTCGCCTGGAGGAAGTTGAGCTGAACG.............2711.001100000
........CAAGCTGGAGACCATCAAGA..........................................................................................................................................................................................................................................................................2011.001000001
.................................TTGGAAGTCGAAGTCAAG...................................................................................................................................................................................................................................................1811.001100000
........................................................................................................................................................................................................................................................TGTCCATTCGCCTGGAGGAAGTA.......................2311.001000001
........................................................................................................................................................................................................................................................TGTCCATTCGCCTGGAGGAAGTTGAGCT..................2811.001000010
.........AAGCTGGAGACCATCAAGAAGTC......................................................................................................................................................................................................................................................................2311.001100000
droGri2
GCATTGT-CAAGCTGGAGACCATCAAGAAGTCATTGGAAGTCGAAGTCAAGGTATGT--CCAGA-----TCTCTGAT--C----------------------AATTAA------------TCT---C-------T-----TAT-AGA----T-TAA-------------------------------------ACTA----------CACCC--------------ATTATC---CATCCATAGAACTTGTCCATTCGCTTGGAGGAAGTGGAGCTGAACGCTGTTGCCGGTAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...........................................................................................................................................................................................................................................................CCATTCGCTTGGAGGAAGTGGAGCT..................2511.00101
......................TCAAGAAGTCATTGGAAGTCGAAGTC......................................................................................................................................................................................................................................................2620.50110
......................TCAAGAAGTCATTGGAAGTCG...........................................................................................................................................................................................................................................................2120.50110
.........................AGAAGTCATTGGAAGTCGAAGTC......................................................................................................................................................................................................................................................2320.50101

Generated: 05/17/2015 at 10:47 PM