ID:

der_708

 Coordinate:

scaffold_4784:3434476-3434644 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-24.8 -24.7 -24.7

Flybase annnotation

exon [dere_GLEANR_15053:6]; CDS [Dere\GG14930-cds]; CDS [Dere\GG14930-cds]; exon [dere_GLEANR_15053:5]; intron [Dere\GG14930-in]

No Repeatable elements found

Sense Strand Reads

##################################################-------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
GCCCCAGAGTCCCGACAGCAGTCCAGTTGTGCCAAATGTGCCCACAAATGGTAGGTGTAGGGTGTTTGTAAATTACTACCGTCTGCTTACTACTCATCCGCTGACCGTACTAATTTTTCCTCTCTTCTTTTGATTTTTGTGTTAACTCAACTAAATACAAAACACCAAAACACCGAACCTCCGAACAACCCAATCCAACCCAACCAACCCATAACCCAGTTGGTCGCTCGACTACCAAAAAGGAGCAGCGCTCGGATAACAATCTCTAC
**************************************************...(((...(((((((((.((((((.(((.(((.((.............)).))).))).))))))...........(((((..(((((((((..........)))))))))...)))))...........))))).))))......)))...................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M055
female body
 V107
male body		 V108
head
 V040
embryo
 M057
embryo
..................................................GTAGGTGTAGGGTGTTTGTAAATTAC................................................................................................................................................................................................. 26 0 1 1.00 1 0 1 0 0 0
.......................................................................................................................................................................................................................AATGTTGGTCGCTCGACTACC................................. 21 3 1 1.00 1 1 0 0 0 0
...CCAGAGTCCCGACAGCAGT....................................................................................................................................................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0
.................................................................................................................................................................................................TCCAACACAACCAACCCCTGAC...................................................... 22 3 2 0.50 1 0 0 0 1 0
........................................................................................................................................................AAATACAACACCCAAAAACACC............................................................................................... 22 3 8 0.13 1 0 0 0 0 1

Anti-sense strand reads

CGGGGTCTCAGGGCTGTCGTCAGGTCAACACGGTTTACACGGGTGTTTACCATCCACATCCCACAAACATTTAATGATGGCAGACGAATGATGAGTAGGCGACTGGCATGATTAAAAAGGAGAGAAGAAAACTAAAAACACAATTGAGTTGATTTATGTTTTGTGGTTTTGTGGCTTGGAGGCTTGTTGGGTTAGGTTGGGTTGGTTGGGTATTGGGTCAACCAGCGAGCTGATGGTTTTTCCTCGTCGCGAGCCTATTGTTAGAGATG
**************************************************...(((...(((((((((.((((((.(((.(((.((.............)).))).))).))))))...........(((((..(((((((((..........)))))))))...)))))...........))))).))))......)))...................************************************************** 		Read size # Mismatch Hit Count Total Norm Total M055
female body
 V040
embryo
 V108
head
 V107
male body		 V060
head
..................................................................................................................................................................................................GGTTGGGTTGGTTGGGTGT........................................................ 19 1 1 1.00 1 1 0 0 0 0
.......................................................................................................GGGCATGGTTAAACAGGAGAG................................................................................................................................................. 21 3 2 0.50 1 1 0 0 0 0
..........................................................................................................CATGGTTAAACAGGAGAGATG.............................................................................................................................................. 21 3 2 0.50 1 1 0 0 0 0
...................................................................................................................................................................TGGTTTTATCGCTTGGACGC...................................................................................... 20 3 3 0.33 1 0 1 0 0 0
.........................................................................................................GCATGGTTAAACAGGAGAGAT............................................................................................................................................... 21 3 3 0.33 1 1 0 0 0 0
................................................................................................................TAAAAAGGAGAGAATGAAATTA....................................................................................................................................... 22 3 6 0.17 1 0 0 1 0 0
...........................................................................................................................................................................................GGGGTTAGGTCGGGTTGGT............................................................... 19 2 10 0.10 1 0 1 0 0 0
..............................................................................................................................................................................................................TGGGTTTTGGGTCAAACA............................................. 18 2 10 0.10 1 0 1 0 0 0
.........................................................................................................................................................................................ATTGGGTTAGGTTTGGTTGTTT.............................................................. 22 3 12 0.08 1 0 0 0 0 1
........................................................................................................................AGAGAAGAAAACAAAGAACA................................................................................................................................. 20 2 12 0.08 1 0 0 0 1 0
.........................................GGTGTTAACCTTCCACAT.................................................................................................................................................................................................................. 18 2 14 0.07 1 1 0 0 0 0
...................................................................................................................................................................................................................................AGGGGATGGTTGTTCCTCG....................... 19 3 20 0.05 1 0 0 0 1 0
.................................................................................................................................................................................................AGGTTTGGTTGATTGGGTAG........................................................ 20 3 20 0.05 1 0 0 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4784:3434426-3434694 + der_708 GCCCCAGAGTCC------------CGACAGCAGTCCAGTTGTGCCAAATGTGC---CCACAAATGGTAGGTGT-AG--GGTG---TT-TGTAA--------ATT--AC--------TACC-G------------TCT----GCTTACT----------------------------ACTCATCC-GCTG-------------------------------ACCGTACTAATTT-------------T------------TC--C----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-TACA--AAACACCA-----------------------------------------------AAACACCGAACCTCCGA-ACAACCCA-ATCCAACCCAACCAAC--CCA---------TA---ACCCAGTTGGTCGCTCGACTACCAAAAAGGAGCAGCGCTCGGATAACAATCTCTAC
droYak3 3L:8513123-8513400 - GCCCCAGAGTCC------------CGACAGCAGTCCCGTTGTGCCAAATGTGC---CCTCAAATGGTAGGTGC-TG--GGTG---TT-TGAAA--------ATC--AC--------AACCTT------------TCT----GCTTACT----------------------------ACTCATCC-GCTG-------------------------------ACCGTACTAATCT-------------T------------TC--C----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-TACA--AAACACCAA-------------------------------------C-ACAC-AAAAACACCGAAACTCCGA-ACAACCCA-ATCCAATCCAACCAACCCCAA--------------ACCCAGTTGGTCGCTCGACTACCAAAAAGGAGCAGCGCTCGGATAACAATCTCTAC
droSec2 scaffold_0:219240-219497 - dse_385 GCCCCAGAGTCC------------CGACAGCAGTCCCGTTGTGCCAAATGTGC---CCACAAATGGTAGGTAT-AGTTGGTGT--TT-TAAGA--------ATA--AC--------TACC-G------------TCT----GCTTACT----------------------------ACTCATCC-GCTG-------------------------------ACCGTACTAATTT-------------T------------TC--C----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-TACA--AA-------------------------------------------------------ACACCGAAACTCCGA-ACAACCCA-ATCCAAAC-------T-CCCA---------TA---CCCCAGTTGGTCGCTCGACTACCAAAAAGGAGCAGCGGTCGGACAACAATCTCTAC
droSim2 3l:7742701-7742958 - dsi_12766 GCCTCAGAGTCC------------CGACAGCAGTCCCGTTGTGCCAAATGTGC---CCACAAATGGTAGGTGT-AGTTGGTGT--TT-TAAGA--------ATA--AC--------TACC-G------------TCT----GCTTACT----------------------------ACTCATCC-GCTG-------------------------------ACCGTACTAATTT-------------T------------TC--C----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-TACA--AA-------------------------------------------------------ACACCGAAACTCCGA-ACAACCCA-ATCCAAAC-------T-CCCA---------TA---CCCCAGTTGGTCGCTCGACTACCAAAAAGGAGCAGCGCTCGGATAACAATCTCTAC
dm3 chr3L:7925193-7925450 - GCCCCAGAGTCC------------CGACAGCAGTCCCGTTGTGCCAAATGTGC---CCACAAATGGTAGGTGC-AGTTGGCGT--TT-TAAGA--------ATA--AC--------TACC-A------------TCT----GCTTACT----------------------------ACTCATCC-GCTG-------------------------------ACCGTACTAATTT-------------T------------TC--C----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-TACA--AA-------------------------------------------------------ACACCGAAACTCCGA-ACAACCCA-ATCCAAAC-------T-CCCA---------TA---CCCCAGTTGGTCGCTCGACTACCAAAAAGGAGCAGCGCTCGGATAACAATCTCTAC
droEug1 scf7180000409524:720385-720642 + ACCCCAAAGTCC------------AGACAGTAGTCCAGTTGTGCCAAATGTGC---CCACAAATGGTATGTTC-AG--GG-GT--CT-CGACG--------ACC--AT--------ATT-CC------------TTT----ACTTACT----------------------------ACTGAACC-GCTT-------------------------------ACCATACTAATGT-------------T------------TC--C----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-CAAA--AA----CA-----------------------------------------------AAACACCGAAACTTCGA-ACAACCCA-ATCCAAAT-------TCCCCA--------------TCCCAGTTGGTCGTTCGACCACCAAAAAGGAGCAGCGCTCAGATAACAATCTCTAC
droBia1 scf7180000302428:3020061-3020326 - GCCCCAGAGCCC------------CGACAGCAGTCCCGTTGTGCCAAATGTGC---CCACAAATGGTAGGTGC-AG--GG-AT--TC-CGAGG--------ATCCAAC--------ATG-CC------------TAT----GCTCACT----------------------------ACTCAAGC-GCTC-------------------------------ACCGTACTAATGT-------------T------------TC--C----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-AACA--AA--------------------------------------------C-AAACAAAAAACACCGAAACTCCGA-ACCACCCA-ATCCAAAT-------CCCCCA--------------ACCCAGTTGGTCGTTCGACCACCAAAAAGGAGCAGCGCTCGGATAACAATCTCTAC
droTak1 scf7180000415352:257369-257624 - GCCCCAGAGCCC------------CGACAGCAGTCCCGTTGTGCCAAATGTGC---CCACAAATGGTAGGTGC-TG--GG-AT--TT-CAAGG--------AAC--AC--------ATC-CC------------TCG----GCTTTCT----------------------------ACTCAACT-GCTC-------------------------------ACCGTACTAATGT-------------T------------TC--C----------TCTC-----TTC---TCTT------------GATTTTT--GTGTTAACTCAACTAAA-CAAA--AA----C-------------------------------------------------AACACCGAAACTCCGA-ACCACCCA-ACCCAAAT-------CCCCGA--------------TCCCAGTTGGTCGTTCGACCACCAAAAAGGAGCAGCGCTCGGATAACAATCTCTAC
droEle1 scf7180000490993:1969132-1969382 + GCCCCAAAGTCC------------CGACAGCAGTCCCGTCGTGCCAAATGTGC---CCACAAATGGTAGGTGC-AG--GG-AT--TT-GATGG--------ATC--ACACACACACACA-CC------------TCT----GCTAGCT----------------------------ACTCAACC-GCTT-------------------------------ACCGTACTAATGT-------------T------------TCCTC----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-CCAA----------------------------------------------------------------------CCGA-ACAACCCC-ATCCAAAA-------TCCCCA--------------TCCCAGTTGGTCGCTCGACCACCAAGAAGGAGCAGCGCTCGGATAACAATCTCTAC
droRho1 scf7180000779160:13566-13819 + GCCCCAGAGCCC------------CGACAGCAGTCCCGTTGTGCCAAACGTGC---CCACAAATGGTAGGTGC-AG--GG-AT--TG-GAAGG--------AAC--AC--------TTT-CC------------TCT----GCTTACC----------------------------ACTCAACC-GCTT-------------------------------ACCGTACTAATGT-------------T------------TC--C----------ACTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-CCAA--AA-------------------------------------------------------ACACCGAAACACCGA-ACAACCCC-ATCCAAAT-------CTCCCA--------------TCCCAGTTGGTCGCTCGACCACCAAGAAGGAACAGCGCTCGGATAACAATCTCTAC
droFic1 scf7180000454065:241897-242141 - GCCCCAAAGTCC------------CGACAGCAGTCCCGTTGTGCCAAATGTGC---CCTCAAATGGTAGGTGC-AG--GA-AT--CT-CAAGG--------ATC--TC--------AAT-CC------------TCT----GGTTACT----------------------------ACTCAACC-GCTC-------------------------------ACCGTACTAATGT-------------T------------TC--C----------GCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-ACA---AA--------------------------------------------C-AA------------------ACGA-ACAACCCA-ATCCAAAA-------CCCCCA--------------TCCCAGTTGGTCGTTCGACCACCAAAAAGGAGCAGCGCTCGGATAACAATCTCTAC
droKik1 scf7180000302274:257045-257305 - GCCCCAAAGCCC------------CGACAGCAGTCCAATTGTGCCAAATGTGC---CCGCAAATGGTATGTGC-AG--AG-AT--CG-CAGGG--------AAT--TT--------ATG-CC------------TTT----GCTTACTTTACAT----------------------TCTTAACC-GCTT-------------------------------ACCATACTAATTTC------------T------------TT--C----------ACTT-----TTC---TTTT------------GATTTTTGTGTGTTAACTCGACTAAA-AACA--A--------------------------------------------------------ACTCTGC--CACCGA-ACAACCCAAATCCAAAT-------TCCCCA--------------ACCCAGTTGGTCGTTCGACCACCAAAAAGGAGCAGCGCTCGGATAACAATCTTTAC
droAna3 scaffold_13337:16094539-16094792 + dan_2667 GCCCCAGAGCCC------------CGAC---AGTCCTGTTGTGCCAAATGTGC---CCGCTAATGGTAGGTGA-CA--GT-GT--CC-TGTAG--------ATG--AT--------ATT-TC------------TCT----GCCTTCT----------------------------ACTGAACCAACTC-------------------------------ACCGTACTAATGT-------------T------------TC--C-----TTT--TCTC-----TAT---TTTT------------GATTTTT--GTGTTAACTTGACTAAAATCCA--CA---------------------------------------------------------ACCGAAACTCCAAAACATCCCG-ATCCAAAA-------C-CCCA--------------TCCCAGTTGGTCGATCGACCACCAAGAAGGAGCAAAGGTCGGACAACAACCTCTAC
droBip1 scf7180000396589:340267-340522 - GCCCCAGAGCCC------------CGAC---AGTCCTGTTGTGCCAAATGTGC---CCGCTAATGGTAGGTGCCAG--GGTCC--TT-TGGGG--------ATT--AT----------T-TT------------TAT----GCTTCTT----------------------------ACTGATCC-ACTC-------------------------------ACCGTACTAATGT-------------T------------TC--C-----TTC--TCTC-TA--TTT---TTTT------------GATTTTT--GTGTTAACTCGACTAAA-TCCA-----------------------------------------------------------ACACCGAAACTCCGCCACAACCCA-ATCCAAAA-------ACCCCA---------T----TCCCAGTTGGTCGATCGACCACCAAGAAGGAGCAGAGGTCGGACAACAATCTCTAT
dp5 XR_group8:1565456-1565730 + GCCCCAGAGTCCCCC---------CGACACCAGTCCCGTTGTGCCAAACGTGCCTCCCGCAAATGGTAGGTTC-GG--GT-GCCTTTGGGAGGCCCAAAAGATT-AT------------C-T------------TC-----------C----ACTCT----------------GCCACTCA-----CAC-------------------------------ACCGTACTAATGT-------------G------------TC--T----ACTTCTTGCTCTC--TTTTGTTTTT------------GATTTGT--GTGTTAACTCGACTAAA-ACCTCGAC--------------------------------------------C-AAACCCCAAACACTG----------------------------------CCCCCAACCTTTGCGTC---CGTCAGTTGGTCGCTCGACCACCAAAAAGGAGCAGCGCTCGGACAATAATCTCTAC
droPer2 scaffold_24:1487935-1488209 - GCCCCAGAGTCCCCC---------CGACACCAGTCCCGTTGTGCCAAACGTGCCTCCCGCAAATGGTAGGTTC-GG--GT-GCCTTTGGGAGGCCCAAAAGATT-AT------------C-T------------TC-----------C----ACTCT----------------GCCACTCA-----CAC-------------------------------ACCGTACTAATGT-------------G------------TC--T----ACTTCTTGCTCTC--TTTTGTTTTT------------GATTTGT--GTGTTAACTCGACTAAA-ACCTCGAC--------------------------------------------C-AAACCCCAAACACTG----------------------------------CCCCCAACCTTTGCGTC---CGTCAGTTGGTCGCTCGACCACCAAAAAGGAGCAGCGCTCGGACAATAATCTCTAC
droWil2 scf2_1100000004768:2702561-2702888 - GCCAAACAGTCCGCTCAATGATGATGACAGTAGTCCCATTGTGCCAAATGTAC---CCGCAAATGGTAAGCAG-AA--GA-AT--A--------------------TC--------ATCC-A-------------------------------TTCTTATTTTCATCCTGCCCGCCACACATCC-ATTTTAGTTAAACCTGATATCCACTTTTTAGTTGCACTTTACTAATCTCAATCTCTAATCTCTCTCTCTCTCTCTT--T----ACTTCCCCCCTTT--TTTTTTTTTTGGTTATGCTCTTG-CGTGT--GTGCTAACTCTAATA-----CT--AAAAATCA-----------------------------------------------AATCA---------------------------------------CCTG---------TCTTGTACCAGTTGGTCGTTCCACTACCAAAAAGGAGCAACGCACGGATAATAATCTATAC
droVir3 scaffold_13049:20742925-20743197 - dvi_20826 GCCGCAGAGTCC------------AGATATGAGTCCCGTTGTGCCAAATGTGC---CCGCAAATGGTAGGTGG-AG--GC-GT--CT------------------------------ACC-ATCTGGCTGAACCT---TTAG----CT--------------------------------AACC-TGCA-------------------------------ACTCTACTAATTT-------------T------------CC--AACAAATTTTCTACT-----TTC---TTTT------------G-TGTTT--GTGTTAACTTCACTAAA-AAAA--AAA-ACCAAACAAAAACAAAACGAACCCGCCAATA----CATAAA-ATA--------------------------AACCCG-A---------------ACCAA--------------TCCAAGTTGGTCGTTCGACCACCAAAAAGGAACAGCGCTCGGACAATAATCTATAC
droMoj3 scaffold_6680:8452264-8452513 - GCCGCAGAGTCC------------CGACATAAGTCCCGTTGTGCCAAATGTGC---CCGCAAATGGTAGGTGG-AG--GC-GT--CT------------------------------ACC-AAATGGCTGAACCT---TTAG----CT--------------------------------AACC-TGCA-------------------------------ACTGTACTAATTT-------------T------------CC--A----ATATTCTATTTTCTTTTG---TGTT------------TGTGTTT--GTGTTAACTTCACTAAA-AACG--AA-----------------------TCC----ATA----TATAAA------------ACA--------------AAACCCA-A---------------CCCCA--------------ACCCAGTTGGTCGTTCGACCACCAAGAAGGAGCAACGCTCGGACAACAATCTGTAC
droGri2 scaffold_15110:11787535-11787815 + GCCACAGAGTCC------------AGACATGAGTCCCGTTGTGCCAAATGTGC---CCGCAAATGGTAAGTGA-TG--GG----------AGG--------CTC--TT---------ACC-AACTGGCTGCTCCTCTTTTAG----CT----------------------------AACCTACT-GCAA-------------------------------CTCGTACTAATTT-------------T------------CC--A---AATTTTCTACT-----TTC---TTTT------------G-TGTTT--GTGTTAACTTAACTAAA-CAAA--AAA-CCGTAACGAAACCAACCCAAAAAATTCAATACAAATATAAAAATA--------------------------A---------------------AACCAA--------------TCCCAGTTGGTCGTTCGACTACCAAAAAGGAGCACCGCTCGGACAATAATCTCTAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
GCCCCAGAGTCC------------CGACAGCAGTCCAGTTGTGCCAAATGTGC---CCACAAATGGTAGGTGT-AG--GGTG---TT-TGTAA--------ATT--AC--------TACC-G------------TCT----GCTTACT----------------------------ACTCATCC-GCTG-------------------------------ACCGTACTAATTT-------------T------------TC--C----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-TACA--AAACACCA-----------------------------------------------AAACACCGAACCTCCGA-ACAACCCA-ATCCAACCCAACCAAC--CCA---------TA---ACCCAGTTGGTCGCTCGACTACCAAAAAGGAGCAGCGCTCGGATAACAATCTCTACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.................................................................GTAGGTGT-AG--GGTG---TT-TGTAA--------ATT--AC--------...........................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000100
...CCAGAGTCC------------CGACAGCAGT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000010
droYak3
GCCCCAGAGTCC------------CGACAGCAGTCCCGTTGTGCCAAATGTGC---CCTCAAATGGTAGGTGC-TG--GGTG---TT-TGAAA--------ATC--AC--------AACCTT------------TCT----GCTTACT----------------------------ACTCATCC-GCTG-------------------------------ACCGTACTAATCT-------------T------------TC--C----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-TACA--AAACACCAA-------------------------------------C-ACAC-AAAAACACCGAAACTCCGA-ACAACCCA-ATCCAATCCAACCAACCCCAA--------------ACCCAGTTGGTCGCTCGACTACCAAAAAGGAGCAGCGCTCGGATAACAATCTCTACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
GCCCCAGAGTCC------------CGACAGC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00101000000000
............................AGCAGTCCCGTTGTGCCAAATGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100001000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAGCAGCGCTCGGATAAC.........2211.00100100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGCAGCGCTCGGATAACAATCT....2511.00100000010000
droSec2
GCCCCAGAGTCC------------CGACAGCAGTCCCGTTGTGCCAAATGTGC---CCACAAATGGTAGGTAT-AGTTGGTGT--TT-TAAGA--------ATA--AC--------TACC-G------------TCT----GCTTACT----------------------------ACTCATCC-GCTG-------------------------------ACCGTACTAATTT-------------T------------TC--C----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-TACA--AA-------------------------------------------------------ACACCGAAACTCCGA-ACAACCCA-ATCCAAAC-------T-CCCA---------TA---CCCCAGTTGGTCGCTCGACTACCAAAAAGGAGCAGCGGTCGGACAACAATCTCTACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCAAAAAGGAGCAGCGGTCGG..............2411.0010100
.............................GCAGTCCCGTTGTGCCAAATGTGC---CC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
...................................CCGTTGTGCCAAATGTGC---CCACAAATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGGAGCAGCGGTCGGACA...........2111.0010100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCAAAAAGGAGCAGC....................1811.0010010
droSim2
GCCTCAGAGTCC------------CGACAGCAGTCCCGTTGTGCCAAATGTGC---CCACAAATGGTAGGTGT-AGTTGGTGT--TT-TAAGA--------ATA--AC--------TACC-G------------TCT----GCTTACT----------------------------ACTCATCC-GCTG-------------------------------ACCGTACTAATTT-------------T------------TC--C----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-TACA--AA-------------------------------------------------------ACACCGAAACTCCGA-ACAACCCA-ATCCAAAC-------T-CCCA---------TA---CCCCAGTTGGTCGCTCGACTACCAAAAAGGAGCAGCGCTCGGATAACAATCTCTACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................AGA--------ATA--AC--------TACC-G------------TCT----GC................................................................................................................................................................................................................................................................................................................................................................................1811.00110000000000000000
....................................CGTTGTGCCAAATGTGC---CCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000100000
............................................................................................................................................................................................................................................................................................................................................................................................................CACCGAAACTCCGA-ACAACCC.............................................................................................2111.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGTCGCTCGACTACC.................................1811.00100100000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGGAGCAGCGCTCGGATAAC.........2311.00100010000000000000
.....AGAGTCC------------CGACAGCAGTCCCGTTGTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100010000000000000
..................................................................................................................................................................................................................................................................................................TTT------------GATTTTT--GTGTT................................................................................................................................................................................................1560.33200000000020000000
dm3
GCCCCAGAGTCC------------CGACAGCAGTCCCGTTGTGCCAAATGTGC---CCACAAATGGTAGGTGC-AGTTGGCGT--TT-TAAGA--------ATA--AC--------TACC-A------------TCT----GCTTACT----------------------------ACTCATCC-GCTG-------------------------------ACCGTACTAATTT-------------T------------TC--C----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-TACA--AA-------------------------------------------------------ACACCGAAACTCCGA-ACAACCCA-ATCCAAAC-------T-CCCA---------TA---CCCCAGTTGGTCGCTCGACTACCAAAAAGGAGCAGCGCTCGGATAACAATCTCTACSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..................................................................TAGGTGC-AGTTGGCGT--TT-TAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000100
................................................................GGTAGGTGC-AGTTGGCGT--TT-T......................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..................................................................................................................................................CT----------------------------ACTCATCC-GCTG-------------------------------ACCGTA.............................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA---CCCCAGTTGGTCGCTCGACTACC.................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................CTTACT----------------------------ACTCATCC-GCTG-------------------------------ACCGT..............................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAAAAAGGAGCAGCGCTCGGA.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................TACC-A------------TCT----GCTTACT----------------------------ACTCATCC-GCT...................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAAAAAGGAGCAGCGCT.................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
................................GTCCCGTTGTGCCAAATGTGC---AA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CAGTCCCGTTGTGCCAAATGTGC---CCACAAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAGGAGCAGCGCTCGGATA...........2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CCGTTGTGCCAAATGTGC---C......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACTACCAAAAAGGAGCAGCGCTCGGA.............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGCTCGACTACCAAAAAG...........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACTACCAAAAAGGAGCAGCGCTCGGA.............2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCGCTCGGATAACAATCTCTAC2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................CAGTCCCGTTGTGCCAAATGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................CCGTTGTGCCAAATGTGC---CC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TAGGTGC-AGTTGGCGT--TT-TAAGA--------..........................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGACTACCAAAAAGGAGCAGCGCTCGG..............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................GCCAAATGTGC---CCACAAATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................TAGGTGC-AGTTGGCGT--TT-T......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
...............................................................................GCGT--TT-TAAGA--------ATA--AC--------TACC-A------------TCT----GC................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TA--AC--------TACC-A------------TCT----GCTTACT----------------------------AC.............................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................GTAGGTGC-AGTTGGCGT--TT-TAAGA--------ATA--.....................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................CA-ATCCAAAC-------T-CCCA---------TA---CCCCA...................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCGCTCGGATAACAATCTCTA.2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAAAAAGGAGCAGCGCTC................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTACCAAAAAGGAGCAGC....................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................................................AGGTGC-AGTTGGCGT--TT-TA.....................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
..................................CCCGTTGTGCCAAATGTGC---.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTACCAAAAAGGAGCAGCGCTCGGA.............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
..........................................................................................................AC--------TACC-A------------TCT----GCTTACT----------------------------ACT............................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................GGTGC-AGTTGGCGT--TT-TA.....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
.......AGTCC------------CGACAGCAGTCCCGTTGTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCAAAAAGGAGCAGCGCTCGGATAAC.........2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCAAAAAGGAGCAGCGCTCGG..............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................AGTCCCGTTGTGCCAAATGTGC---CCAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................A-ATCCAAAC-------T-CCCA---------TA---CCCCAGTTG...............................................2511.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................TA--AC--------TACC-A------------TCT----GCTTACT----------------------------ACT............................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................TTACT----------------------------ACTCATCC-GCTG-------------------------------ACCG...............................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGCAGCGCTCGGATAACAATCTC...2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................GTAGGTGC-AGTTGGCGT--TT-TA.....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
........................................................................C-AGTTGGCGT--TT-TAAGA--------AGT--.....................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
ACCCCAAAGTCC------------AGACAGTAGTCCAGTTGTGCCAAATGTGC---CCACAAATGGTATGTTC-AG--GG-GT--CT-CGACG--------ACC--AT--------ATT-CC------------TTT----ACTTACT----------------------------ACTGAACC-GCTT-------------------------------ACCATACTAATGT-------------T------------TC--C----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-CAAA--AA----CA-----------------------------------------------AAACACCGAAACTTCGA-ACAACCCA-ATCCAAAT-------TCCCCA--------------TCCCAGTTGGTCGTTCGACCACCAAAAAGGAGCAGCGCTCAGATAACAATCTCTACSizeHit CountTotal NormTotal
No Reads
droBia1
GCCCCAGAGCCC------------CGACAGCAGTCCCGTTGTGCCAAATGTGC---CCACAAATGGTAGGTGC-AG--GG-AT--TC-CGAGG--------ATCCAAC--------ATG-CC------------TAT----GCTCACT----------------------------ACTCAAGC-GCTC-------------------------------ACCGTACTAATGT-------------T------------TC--C----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-AACA--AA--------------------------------------------C-AAACAAAAAACACCGAAACTCCGA-ACCACCCA-ATCCAAAT-------CCCCCA--------------ACCCAGTTGGTCGTTCGACCACCAAAAAGGAGCAGCGCTCGGATAACAATCTCTACSizeHit CountTotal NormTotal
No Reads
droTak1
GCCCCAGAGCCC------------CGACAGCAGTCCCGTTGTGCCAAATGTGC---CCACAAATGGTAGGTGC-TG--GG-AT--TT-CAAGG--------AAC--AC--------ATC-CC------------TCG----GCTTTCT----------------------------ACTCAACT-GCTC-------------------------------ACCGTACTAATGT-------------T------------TC--C----------TCTC-----TTC---TCTT------------GATTTTT--GTGTTAACTCAACTAAA-CAAA--AA----C-------------------------------------------------AACACCGAAACTCCGA-ACCACCCA-ACCCAAAT-------CCCCGA--------------TCCCAGTTGGTCGTTCGACCACCAAAAAGGAGCAGCGCTCGGATAACAATCTCTACSizeHit CountTotal NormTotal
No Reads
droEle1
GCCCCAAAGTCC------------CGACAGCAGTCCCGTCGTGCCAAATGTGC---CCACAAATGGTAGGTGC-AG--GG-AT--TT-GATGG--------ATC--ACACACACACACA-CC------------TCT----GCTAGCT----------------------------ACTCAACC-GCTT-------------------------------ACCGTACTAATGT-------------T------------TCCTC----------TCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-CCAA----------------------------------------------------------------------CCGA-ACAACCCC-ATCCAAAA-------TCCCCA--------------TCCCAGTTGGTCGCTCGACCACCAAGAAGGAGCAGCGCTCGGATAACAATCTCTACSizeHit CountTotal NormTotal
No Reads
droRho1
GCCCCAGAGCCC------------CGACAGCAGTCCCGTTGTGCCAAACGTGC---CCACAAATGGTAGGTGC-AG--GG-AT--TG-GAAGG--------AAC--AC--------TTT-CC------------TCT----GCTTACC----------------------------ACTCAACC-GCTT-------------------------------ACCGTACTAATGT-------------T------------TC--C----------ACTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-CCAA--AA-------------------------------------------------------ACACCGAAACACCGA-ACAACCCC-ATCCAAAT-------CTCCCA--------------TCCCAGTTGGTCGCTCGACCACCAAGAAGGAACAGCGCTCGGATAACAATCTCTACSizeHit CountTotal NormTotal
No Reads
droFic1
GCCCCAAAGTCC------------CGACAGCAGTCCCGTTGTGCCAAATGTGC---CCTCAAATGGTAGGTGC-AG--GA-AT--CT-CAAGG--------ATC--TC--------AAT-CC------------TCT----GGTTACT----------------------------ACTCAACC-GCTC-------------------------------ACCGTACTAATGT-------------T------------TC--C----------GCTC-----TTC---TTTT------------GATTTTT--GTGTTAACTCAACTAAA-ACA---AA--------------------------------------------C-AA------------------ACGA-ACAACCCA-ATCCAAAA-------CCCCCA--------------TCCCAGTTGGTCGTTCGACCACCAAAAAGGAGCAGCGCTCGGATAACAATCTCTACSizeHit CountTotal NormTotal
No Reads
droKik1
GCCCCAAAGCCC------------CGACAGCAGTCCAATTGTGCCAAATGTGC---CCGCAAATGGTATGTGC-AG--AG-AT--CG-CAGGG--------AAT--TT--------ATG-CC------------TTT----GCTTACTTTACAT----------------------TCTTAACC-GCTT-------------------------------ACCATACTAATTTC------------T------------TT--C----------ACTT-----TTC---TTTT------------GATTTTTGTGTGTTAACTCGACTAAA-AACA--A--------------------------------------------------------ACTCTGC--CACCGA-ACAACCCAAATCCAAAT-------TCCCCA--------------ACCCAGTTGGTCGTTCGACCACCAAAAAGGAGCAGCGCTCGGATAACAATCTTTACSizeHit CountTotal NormTotal
No Reads
droAna3
GCCCCAGAGCCC------------CGAC---AGTCCTGTTGTGCCAAATGTGC---CCGCTAATGGTAGGTGA-CA--GT-GT--CC-TGTAG--------ATG--AT--------ATT-TC------------TCT----GCCTTCT----------------------------ACTGAACCAACTC-------------------------------ACCGTACTAATGT-------------T------------TC--C-----TTT--TCTC-----TAT---TTTT------------GATTTTT--GTGTTAACTTGACTAAAATCCA--CA---------------------------------------------------------ACCGAAACTCCAAAACATCCCG-ATCCAAAA-------C-CCCA--------------TCCCAGTTGGTCGATCGACCACCAAGAAGGAGCAAAGGTCGGACAACAACCTCTACSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................GTAGGTGA-CA--GT-GT--CC-TGTAG--------AT........................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
.........................GAC---AGTCCTGTTGTGCCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
......................................TTGTGCCAAATGTGC---CCGCTAATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001100000
.................................................................GTAGGTGA-CA--GT-GT--CC-TGTAG--------ATG--.....................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGATCGACCACCAAGAAGGAGC.......................2211.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGACCACCAAGAAGG..........................1811.001100000
.................................................................................................................................................TCT----------------------------ACTGAACCAACTC-------------------------------ACCGTAA............................................................................................................................................................................................................................................................................................2311.001000001
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCACCAAGAAGGAGCAAAGGTCGGA.............2511.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGATCGACCACCAAGAA............................1911.001100000
................................GTCCTGTTGTGCCAAATGTGC---CC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCGACCACCAAGAAGGAG........................2011.001100000
droBip1
GCCCCAGAGCCC------------CGAC---AGTCCTGTTGTGCCAAATGTGC---CCGCTAATGGTAGGTGCCAG--GGTCC--TT-TGGGG--------ATT--AT----------T-TT------------TAT----GCTTCTT----------------------------ACTGATCC-ACTC-------------------------------ACCGTACTAATGT-------------T------------TC--C-----TTC--TCTC-TA--TTT---TTTT------------GATTTTT--GTGTTAACTCGACTAAA-TCCA-----------------------------------------------------------ACACCGAAACTCCGCCACAACCCA-ATCCAAAA-------ACCCCA---------T----TCCCAGTTGGTCGATCGACCACCAAGAAGGAGCAGAGGTCGGACAACAATCTCTATSizeHit CountTotal NormTotal
No Reads
dp5
GCCCCAGAGTCCCCC---------CGACACCAGTCCCGTTGTGCCAAACGTGCCTCCCGCAAATGGTAGGTTC-GG--GT-GCCTTTGGGAGGCCCAAAAGATT-AT------------C-T------------TC-----------C----ACTCT----------------GCCACTCA-----CAC-------------------------------ACCGTACTAATGT-------------G------------TC--T----ACTTCTTGCTCTC--TTTTGTTTTT------------GATTTGT--GTGTTAACTCGACTAAA-ACCTCGAC--------------------------------------------C-AAACCCCAAACACTG----------------------------------CCCCCAACCTTTGCGTC---CGTCAGTTGGTCGCTCGACCACCAAAAAGGAGCAGCGCTCGGACAATAATCTCTACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
........GTCCCCC---------CGACACCAGTCCCGTTGTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
droPer2
GCCCCAGAGTCCCCC---------CGACACCAGTCCCGTTGTGCCAAACGTGCCTCCCGCAAATGGTAGGTTC-GG--GT-GCCTTTGGGAGGCCCAAAAGATT-AT------------C-T------------TC-----------C----ACTCT----------------GCCACTCA-----CAC-------------------------------ACCGTACTAATGT-------------G------------TC--T----ACTTCTTGCTCTC--TTTTGTTTTT------------GATTTGT--GTGTTAACTCGACTAAA-ACCTCGAC--------------------------------------------C-AAACCCCAAACACTG----------------------------------CCCCCAACCTTTGCGTC---CGTCAGTTGGTCGCTCGACCACCAAAAAGGAGCAGCGCTCGGACAATAATCTCTACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGCTCGGACAATAATCTCTAC2312.002200000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAAAAAGGAGCAGCGCTCGGACA...........2612.002200000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCGCTCGGACAATAATCTCT..2211.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTCGACCACCAAAAAGG..........................1911.001001000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAGCGCTCGGACAATAATCTCT..2411.001000010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACCACCAAAAAGGAGCAGCGCTCGGACA...........2911.001100000
droWil2
GCCAAACAGTCCGCTCAATGATGATGACAGTAGTCCCATTGTGCCAAATGTAC---CCGCAAATGGTAAGCAG-AA--GA-AT--A--------------------TC--------ATCC-A-------------------------------TTCTTATTTTCATCCTGCCCGCCACACATCC-ATTTTAGTTAAACCTGATATCCACTTTTTAGTTGCACTTTACTAATCTCAATCTCTAATCTCTCTCTCTCTCTCTT--T----ACTTCCCCCCTTT--TTTTTTTTTTGGTTATGCTCTTG-CGTGT--GTGCTAACTCTAATA-----CT--AAAAATCA-----------------------------------------------AATCA---------------------------------------CCTG---------TCTTGTACCAGTTGGTCGTTCCACTACCAAAAAGGAGCAACGCACGGATAATAATCTATACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCAAAAAGGAGCAACGCACGGAT............2611.00100100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCACTACCAAAAAGGAGCAACGCACG...............2711.00100100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCACTACCAAAAAGGAG........................2011.00100010
.CCAAACAGTCCGCTCAATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAGCAACGCACGGATAATAAT......2511.00100010
......................GATGACAGTAGTCCCATTGTGCC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGTCGTTCCACTACC.................................1811.00110000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGCACGGATAATAATCT....1911.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCAAAAAGGAGCAACGCACGG..............2411.00100010
droVir3
GCCGCAGAGTCC------------AGATATGAGTCCCGTTGTGCCAAATGTGC---CCGCAAATGGTAGGTGG-AG--GC-GT--CT------------------------------ACC-ATCTGGCTGAACCT---TTAG----CT--------------------------------AACC-TGCA-------------------------------ACTCTACTAATTT-------------T------------CC--AACAAATTTTCTACT-----TTC---TTTT------------G-TGTTT--GTGTTAACTTCACTAAA-AAAA--AAA-ACCAAACAAAAACAAAACGAACCCGCCAATA----CATAAA-ATA--------------------------AACCCG-A---------------ACCAA--------------TCCAAGTTGGTCGTTCGACCACCAAAAAGGAACAGCGCTCGGACAATAATCTATACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..........CC------------AGATATGAGTCCCGTTGTGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2212.002000100000001000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAGGAACAGCGCTCGGACA...........2112.002000002000000000000000000000000000000000000000000000000000000000
.................................................................GTAGGTGG-AG--GC-GT--CT------------------------------ACC-AC....................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGACCACCAAAAAGGAACAGCGCTCGG..............2811.001000001000000000000000000000000000000000000000000000000000000000
..CGCAGAGTCC------------AGATATGAGTCCCGTT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000001000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAAGGAACAGCGCTCG...............1911.001000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCGCTCGGACAATAA.......1911.001010000000000000000000000000000000000000000000000000000000000000
..CGCAGAGTCC------------AGATATGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000001000000000000000000000000000000000000000000000000000
............................ATGAGTCCCGTTGTGCCAAATGTGC---.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000000000000000000000000000000000100000000000000000000000000000
.....................................................................................................................ACC-ATCTGGCTGAACCT---TTAG----CT--------------------------------AACC-TGC...................................................................................................................................................................................................................................................................................................................................3011.001000000000000000000000000000000000000000000000000000000000010000
..........CC------------AGATATGAGTCCCGTTGTGCCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000010000000000000000000000000000000000
.....................................GTTGTGCCAAATGTGC---CCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
...........................TATGAGTCCCGTTGTGCCAAATGTGC---.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAACAGCGCTCGGAC............1911.001000000000000000000000000000000000100000000000000000000000000000
.......AGTCC------------AGATATGAGTCCCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000010000000000000000000000000000000000
............................ATGAGTCCCGTTGTGCCAAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000010000000000000000000000000000000000000000
........GTCC------------AGATATGAGTCCCGT........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000000000000100000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAAAGGAACAGCGCTCGGA.............2111.001000000000000000000000000000000000000000000000000000000000000010
.................................................................GTAGGTGG-AG--GC-GT--CT------------------------------ACC-C.....................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000001000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAACAGCGCTCGGACA...........2011.001000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................................................................................................................TTC---TTTT------------G-TGTTT--GTGTTC...............................................................................................................................................................................................1950.201000000000000000000000000000000000000000000000000000000000000001
droMoj3
GCCGCAGAGTCC------------CGACATAAGTCCCGTTGTGCCAAATGTGC---CCGCAAATGGTAGGTGG-AG--GC-GT--CT------------------------------ACC-AAATGGCTGAACCT---TTAG----CT--------------------------------AACC-TGCA-------------------------------ACTGTACTAATTT-------------T------------CC--A----ATATTCTATTTTCTTTTG---TGTT------------TGTGTTT--GTGTTAACTTCACTAAA-AACG--AA-----------------------TCC----ATA----TATAAA------------ACA--------------AAACCCA-A---------------CCCCA--------------ACCCAGTTGGTCGTTCGACCACCAAGAAGGAGCAACGCTCGGACAACAATCTGTACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGCAACGCTCGGACAAC.........1911.001000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGCAACGCTCGGACAAC.........2011.001000010
...............................AGTCCCGTTGTGCCAAATGTGC---CCGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.001100000
..CGCAGAGTCC------------CGACATAAGTCCC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
.............................TAAGTCCCGTTGTGCCAAATGTGC---CCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.001000001
............................ATAAGTCCCGTTGTGCCAAATGTGC---CCGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.001000001
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACGCTCGGACAACAAT......2011.001100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTCGACCACCAAGAAGGAGCAACGCT.................2811.001100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCAAGAAGGAGCAACGCT.................2011.001000001
droGri2
GCCACAGAGTCC------------AGACATGAGTCCCGTTGTGCCAAATGTGC---CCGCAAATGGTAAGTGA-TG--GG----------AGG--------CTC--TT---------ACC-AACTGGCTGCTCCTCTTTTAG----CT----------------------------AACCTACT-GCAA-------------------------------CTCGTACTAATTT-------------T------------CC--A---AATTTTCTACT-----TTC---TTTT------------G-TGTTT--GTGTTAACTTAACTAAA-CAAA--AAA-CCGTAACGAAACCAACCCAAAAAATTCAATACAAATATAAAAATA--------------------------A---------------------AACCAA--------------TCCCAGTTGGTCGTTCGACTACCAAAAAGGAGCACCGCTCGGACAATAATCTCTACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCGCTCGGACAATAATCT....2111.00110

Generated: 05/17/2015 at 10:45 PM