ID:

der_7

 Coordinate:

scaffold_4820:6627843-6627910 +

 Confidence:

Known Ortholog

 Class:

Canonical miRNA

 Genomic Locale:

antisense_to_intron

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-39.1 -38.8 -38.7

Flybase annnotation

Antisense to intron [Dere\GG11413-in]; utr3 [utr3_minus_8785]

No Repeatable elements found

Sense Strand Reads

CTGAAAAGGATATATACCATGTATACCATGAAATCGGACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGAGCGGCGGTCAGGAAAAAAGCGAGAAAAA

***********************************.((((((((.((.((.((.(((((((((.((((((((((((((.......))))))..)))))))))).))))))).)).)).)).))))))))...************************************ 		Read size # Mismatch Hit Count Total Norm Total V108

head

 V107

male body		 M057

embryo

 V060

head

 M055

female body

 V040

embryo
..................................................ATATTGTCCTGTCACAGCAGT................................................................................................. 21 0 1 70255.00 70255 47732 11250 2267 6048 1827 1131
..................................................ATATTGTCCTGTCACAGCAGTA................................................................................................ 22 0 1 17908.00 17908 6632 376 6249 559 1369 2723
..................................................ATATTGTCCTGTCACAGCAG.................................................................................................. 20 0 1 7295.00 7295 5704 399 44 599 536 13
..................................................ATATTGTCCTGTCACAGCA................................................................................................... 19 0 1 5197.00 5197 4913 30 4 219 28 3
..................................................ATATTGTCCTGTCACAGCAGTAA............................................................................................... 23 1 1 1938.00 1938 1625 91 14 86 95 27
..................................................ATATTGTCCTGTCACAGCAGTT................................................................................................ 22 1 1 1772.00 1772 1460 120 5 128 44 15
..................................................AGATTGTCCTGTCACAGCAGTA................................................................................................ 22 1 1 987.00 987 0 2 979 0 4 2
..................................................ATATTGTCCTGTCACAGCAGC................................................................................................. 21 1 1 551.00 551 98 9 415 22 1 6
..................................................AGATTGTCCTGTCACAGCAGT................................................................................................. 21 1 1 423.00 423 3 51 362 2 5 0
..................................................ATATTGTCATGTCACAGCAGT................................................................................................. 21 1 1 374.00 374 352 9 3 4 5 1
..................................................ATATTGTCCTGTCACATCAGT................................................................................................. 21 1 1 326.00 326 245 4 2 53 0 22
..................................................ATATTGTCCTGTAACAGCAGT................................................................................................. 21 1 1 295.00 295 281 1 8 5 0 0
..................................................ATATTGTACTGTCACAGCAGT................................................................................................. 21 1 1 287.00 287 269 3 5 3 6 1
...................................................TATTGTCCTGTCACAGCAGT................................................................................................. 20 0 1 263.00 263 108 11 7 12 124 1
...................................................TATTGTCCTGTCACAGCAGTA................................................................................................ 21 0 1 220.00 220 94 1 18 4 94 9
..................................................ATATTGTCCTGTCACAGCAGTAT............................................................................................... 23 0 1 216.00 216 110 3 13 12 75 3
..................................................ATATTGTCCTGTCACAGAAGT................................................................................................. 21 1 1 212.00 212 190 1 1 9 10 1
..................................................ATATTGTCCTGTCACAGCAGA................................................................................................. 21 1 1 180.00 180 153 8 0 16 1 2
..................................................ATATTTTCCTGTCACAGCAGT................................................................................................. 21 1 1 167.00 167 138 6 12 3 4 4
..................................................ATATTGTCCTTTCACAGCAGT................................................................................................. 21 1 1 163.00 163 129 4 0 22 0 8
..................................................ATATTGTCCTGTCACAGCCGT................................................................................................. 21 1 1 146.00 146 54 2 0 73 0 17
..................................................ATATTGTCCTGTCACAGCATT................................................................................................. 21 1 1 143.00 143 107 0 0 28 3 5
..................................................ATATTGTCCTGTCAAAGCAGT................................................................................................. 21 1 1 139.00 139 121 1 7 9 0 1
...............................................................................................CTGCTGGGTCGGGGCATTAACA................................................... 22 0 1 124.00 124 46 3 22 23 14 16
..................................................ATATTGTCCTGTCACATCAGTA................................................................................................ 22 1 1 113.00 113 41 2 3 5 2 60
..................................................ATATTGTCCTGCCACAGCAGT................................................................................................. 21 1 1 110.00 110 77 10 4 14 3 2
..................................................ATATTGTCCTGTCACAGCAGTAAA.............................................................................................. 24 2 1 107.00 107 94 4 0 4 4 1
..................................................ATATTGTCCTGTCACAGCAGTC................................................................................................ 22 1 1 106.00 106 35 13 31 15 3 9
..................................................ATATTGTCCCGTCACAGCAGT................................................................................................. 21 1 1 94.00 94 78 9 1 4 2 0
....................................................ATTGTCCTGTCACAGCAGT................................................................................................. 19 0 1 90.00 90 56 14 3 6 10 1
..................................................ATATTGTCCTGTCACAGCGGT................................................................................................. 21 1 1 89.00 89 52 5 3 27 2 0
..................................................ATATTGCCCTGTCACAGCAGT................................................................................................. 21 1 1 88.00 88 65 12 1 5 2 3
..................................................ATATTGTCCTGTCACCGCAGT................................................................................................. 21 1 1 86.00 86 52 4 0 29 0 1
..................................................ATACTGTCCTGTCACAGCAGTA................................................................................................ 22 1 1 84.00 84 9 0 68 0 1 6
..................................................ATCTTGTCCTGTCACAGCAGT................................................................................................. 21 1 1 84.00 84 63 9 4 7 0 1
..................................................ATATTGTCCTGTCACAGCAGG................................................................................................. 21 1 1 82.00 82 30 3 9 13 24 3
..................................................ATATTGTCCTGTCACAGCAGGA................................................................................................ 22 1 1 80.00 80 4 0 31 1 24 20
..................................................ACATTGTCCTGTCACAGCAGT................................................................................................. 21 1 1 80.00 80 59 6 6 6 1 2
..................................................ATATTGTCCTGTCACAGCAGTGT............................................................................................... 23 1 1 78.00 78 56 11 0 11 0 0
..................................................ATATTGTCCTGTCGCAGCAGT................................................................................................. 21 1 1 72.00 72 58 6 1 6 0 1
..................................................ATATTGTCCTGTTACAGCAGT................................................................................................. 21 1 1 70.00 70 45 10 3 12 0 0
..................................................ATAGTGTCCTGTCACAGCAGTA................................................................................................ 22 1 1 70.00 70 7 1 61 0 0 1
..................................................ATATTGTCCTGTCATAGCAGT................................................................................................. 21 1 1 68.00 68 46 8 2 5 5 2
..................................................ATATTGTCCTGTCACAGCAGTG................................................................................................ 22 1 1 67.00 67 43 0 2 4 8 10
..................................................ATACTGTCCTGTCACAGCAGT................................................................................................. 21 1 1 66.00 66 35 2 24 3 0 2
..................................................ATGTTGTCCTGTCACAGCAGT................................................................................................. 21 1 1 66.00 66 54 7 1 4 0 0
..................................................ATATTTTCCTGTCACAGCAGTA................................................................................................ 22 1 1 65.00 65 20 2 28 1 3 11
..................................................ATATTGTCCTGTCACACCAGT................................................................................................. 21 1 1 65.00 65 46 6 0 8 2 3
..................................................ATATTGTCCTGTCACAGC.................................................................................................... 18 0 1 64.00 64 60 0 1 1 2 0
..................................................TTATTGTCCTGTCACAGCAGT................................................................................................. 21 1 1 64.00 64 32 1 23 1 5 2
..................................................GTATTGTCCTGTCACAGCAGT................................................................................................. 21 1 1 63.00 63 51 6 1 4 1 0
..................................................ATATTGTACTGTCACAGCAGTA................................................................................................ 22 1 1 62.00 62 30 0 28 1 1 2
..................................................AGATTGTCCTGTCACAGCAGC................................................................................................. 21 2 1 62.00 62 0 0 62 0 0 0
..................................................ATATTGTCCTGTAACAGCAGTA................................................................................................ 22 1 1 61.00 61 37 0 23 1 0 0
..................................................TTATTGTCCTGTCACAGCAGTA................................................................................................ 22 1 1 61.00 61 5 0 53 0 3 0
..................................................ATATTGTCATGTCACAGCAGTA................................................................................................ 22 1 1 61.00 61 44 0 9 1 6 1
..................................................ATAGTGTCCTGTCACAGCAGT................................................................................................. 21 1 1 59.00 59 24 0 25 7 1 2
..................................................ATATCGTCCTGTCACAGCAGT................................................................................................. 21 1 1 55.00 55 41 7 0 2 4 1
..................................................ATATTGTCCTGTCACGGCAGT................................................................................................. 21 1 1 54.00 54 38 6 1 6 1 2
..................................................ATATTGTCCTGTCCCAGCAGT................................................................................................. 21 1 1 53.00 53 34 0 0 18 0 1
.................................................CATATTGTCCTGTCACAGCAGT................................................................................................. 22 1 1 53.00 53 31 1 14 5 2 0
..................................................ATAATGTCCTGTCACAGCAGTA................................................................................................ 22 1 1 51.00 51 4 0 44 0 1 2
..................................................ATATTGTCCTGTCACAGTAGT................................................................................................. 21 1 1 51.00 51 38 4 3 5 1 0
..................................................ATATTGTCCTGTCACAGCAGTAG............................................................................................... 23 1 1 50.00 50 42 1 0 1 6 0
..................................................ATATTGTTCTGTCACAGCAGT................................................................................................. 21 1 1 49.00 49 30 9 1 6 1 2
..................................................ATATTGTCCTGTCACAGCACT................................................................................................. 21 1 1 49.00 49 29 3 1 4 0 12
..................................................ATATTCTCCTGTCACAGCAGT................................................................................................. 21 1 1 48.00 48 32 8 0 6 1 1
..................................................ATATTGTCCTGTCACATCAG.................................................................................................. 20 1 1 47.00 47 38 0 0 7 1 1
..................................................ATATTGTCCTGTCACAGCAGTAC............................................................................................... 23 1 1 46.00 46 30 0 2 5 6 3
..................................................ATAATGTCCTGTCACAGCAGT................................................................................................. 21 1 1 45.00 45 24 5 12 4 0 0
..................................................ATATTATCCTGTCACAGCAGT................................................................................................. 21 1 1 44.00 44 32 3 2 5 0 2
..................................................ATATTGTCCTATCACAGCAGT................................................................................................. 21 1 1 44.00 44 26 7 2 9 0 0
..................................................ATATTGTCCTGTCAAAGCAGTA................................................................................................ 22 1 1 44.00 44 20 0 19 1 0 4
..................................................ATATTGTCTTGTCACAGCAGT................................................................................................. 21 1 1 44.00 44 24 7 3 10 0 0
...................................................TATTGTCCTGTCACAGCAG.................................................................................................. 19 0 1 44.00 44 5 0 0 0 39 0
..................................................ATATTGTCCTGTCACAGCATTA................................................................................................ 22 1 1 44.00 44 18 0 5 2 5 14
....................................................ATTGTCCTGTCACAGCAGTA................................................................................................ 20 0 1 44.00 44 25 0 14 0 5 0
..................................................ATATTGTCCTGTCACAGCAGTTT............................................................................................... 23 1 1 43.00 43 25 3 0 3 12 0
..................................................ATATTGTCCTCTCACAGCAGT................................................................................................. 21 1 1 43.00 43 36 0 0 5 1 1
..................................................ATATTGTCCTGTCACAACAGT................................................................................................. 21 1 1 43.00 43 30 3 1 7 0 2
..................................................ATATTGTCCTGTCACAGCAT.................................................................................................. 20 1 1 43.00 43 36 0 0 7 0 0
..................................................ATTTTGTCCTGTCACAGCAGT................................................................................................. 21 1 1 40.00 40 36 2 0 1 1 0
..................................................ATATTGTCCTTTCACAGCAGTA................................................................................................ 22 1 1 39.00 39 17 1 1 3 0 17
..................................................ATATTGTCCTGTCACAGCAGTGA............................................................................................... 23 2 1 37.00 37 32 2 0 0 3 0
..................................................ACATTGTCCTGTCACAGCAGTA................................................................................................ 22 1 1 37.00 37 10 2 20 0 1 4
..................................................ATATTGTCCTGTCACATCA................................................................................................... 19 1 1 37.00 37 34 0 0 3 0 0
..................................................ATATTGTCCTGCCACAGCAGTA................................................................................................ 22 1 1 37.00 37 14 1 14 1 1 6
..................................................ATATTGTCATGTCACAGCA................................................................................................... 19 1 1 36.00 36 35 0 0 1 0 0
...............................................................................................CTGCTGGGTCGGGGCATTAAC.................................................... 21 0 1 33.00 33 9 1 16 1 1 5
..................................................CTATTGTCCTGTCACAGCAGT................................................................................................. 21 1 1 33.00 33 25 2 0 4 0 2
..................................................ATATTGTACTGTCACAGCAG.................................................................................................. 20 1 1 33.00 33 30 0 0 0 3 0
..................................................ATATTGTCATGTCACAGCAG.................................................................................................. 20 1 1 31.00 31 29 1 0 0 1 0
..................................................ATATTGGCCTGTCACAGCAGT................................................................................................. 21 1 1 31.00 31 4 2 3 9 0 13
..................................................ATATTGTCCTGTCACAGCAGTTG............................................................................................... 23 2 1 30.00 30 24 1 0 3 2 0
..................................................ATATTGTCCTGTCACAGCCGTA................................................................................................ 22 1 1 30.00 30 6 0 1 4 0 19
..................................................ATATTGTCCTGTCACAGCAGCA................................................................................................ 22 1 1 29.00 29 9 0 0 1 1 18
..................................................ATATTGTCCTGTCACTGCAGT................................................................................................. 21 1 1 28.00 28 17 0 3 5 3 0
..................................................ATATTGTACTGTCACAGCA................................................................................................... 19 1 1 28.00 28 28 0 0 0 0 0
..................................................ATATTGGCCTGTCACAGCAGTA................................................................................................ 22 1 1 27.00 27 1 1 10 3 0 12
..................................................ATATTGTCCTTTCACAGCA................................................................................................... 19 1 1 27.00 27 26 0 0 1 0 0
.................................................CATATTGTCCTGTCACAGCAGTA................................................................................................ 23 1 1 27.00 27 8 0 16 0 2 1
..................................................ATATTGTCCTGTCACAGAAGTA................................................................................................ 22 1 1 27.00 27 22 0 0 1 4 0
..................................................ATCTTGTCCTGTCACAGCAGTA................................................................................................ 22 1 1 27.00 27 6 0 19 0 0 2
..................................................ATATTGTCCTGTCACCGCAGTA................................................................................................ 22 1 1 25.00 25 10 0 0 1 0 14
..................................................ATATTGTCCTGTAACAGCAG.................................................................................................. 20 1 1 23.00 23 23 0 0 0 0 0
..................................................ATATTGTCCTGACACAGCAGT................................................................................................. 21 1 1 22.00 22 12 2 1 5 1 1
..................................................ATATTGTCCCGTCACAGCAGTA................................................................................................ 22 1 1 22.00 22 12 0 9 0 0 1
..................................................ATATTGTCCTGTAACAGCA................................................................................................... 19 1 1 21.00 21 21 0 0 0 0 0
..................................................ATATTGACCTGTCACAGCAGT................................................................................................. 21 1 1 20.00 20 10 3 0 3 3 1
..................................................ATATTGTCCTGTCACAGAAG.................................................................................................. 20 1 1 20.00 20 20 0 0 0 0 0
..................................................ATATTGTCCTGTCACAGCAAT................................................................................................. 21 1 1 20.00 20 12 1 0 4 1 2
..................................................ATATTTTCCTGTCACAGCAG.................................................................................................. 20 1 1 20.00 20 19 0 0 0 1 0
..................................................ATATTGTCCTGTCACAGCTGT................................................................................................. 21 1 1 20.00 20 9 1 2 7 0 1
..................................................ATATTGTCCTGTCACAGCAGTCA............................................................................................... 23 2 1 19.00 19 16 1 0 2 0 0
..................................................ATATTGTCCTGTCACAGCAA.................................................................................................. 20 1 1 19.00 19 17 0 0 2 0 0
..................................................ATATTGTCATGTCACAGCAGTAA............................................................................................... 23 2 1 19.00 19 19 0 0 0 0 0
..................................................ATATTCTCCTGTCACAGCAGTA................................................................................................ 22 1 1 19.00 19 10 0 1 1 0 7
..................................................ATATTGTCCTTTCACAGCAG.................................................................................................. 20 1 1 19.00 19 16 0 0 3 0 0
..................................................ATATTGCCCTGTCACAGCAGTA................................................................................................ 22 1 1 19.00 19 8 0 5 0 2 4
..................................................ATATTGTCCTGTCACACCAGTA................................................................................................ 22 1 1 18.00 18 8 0 3 0 0 7
..................................................ATATTGTCCTGCCACAGCAG.................................................................................................. 20 1 1 18.00 18 14 1 0 2 1 0
..................................................ATATTGTCCTGTCACAGCACTA................................................................................................ 22 1 1 18.00 18 3 0 0 2 0 13
........................................................................TTGTAACACTATATTATAGCTTA......................................................................... 23 0 1 18.00 18 11 0 0 0 0 7
..................................................ATCTTGTCCTGTCACAGCAG.................................................................................................. 20 1 1 18.00 18 18 0 0 0 0 0
..................................................ATATTGTCCTGGCACAGCAGT................................................................................................. 21 1 1 17.00 17 3 2 1 5 4 2
..................................................ATATTGTCCTGTCACTGCAGTA................................................................................................ 22 1 1 17.00 17 0 1 12 0 3 1
..................................................ATATTGTCCTGTCGCAGCAGTA................................................................................................ 22 1 1 17.00 17 10 1 3 1 0 2
..................................................ATATTGTCCAGTCACAGCAGT................................................................................................. 21 1 1 17.00 17 12 1 1 2 1 0
..................................................TGATTGTCCTGTCACAGCAGTA................................................................................................ 22 2 1 16.00 16 0 0 16 0 0 0
..................................................ATATTGTCCTGTCACAGAA................................................................................................... 19 1 1 16.00 16 15 0 0 1 0 0
..................................................ATATTGTCCTGTCAAAGCA................................................................................................... 19 1 1 16.00 16 15 0 0 1 0 0
..................................................ATATTGTCCTCTCACAGCAGTA................................................................................................ 22 1 1 16.00 16 3 0 3 0 0 10
..................................................ATATTGTCCTGTTACAGCAGTA................................................................................................ 22 1 1 16.00 16 4 0 6 0 1 5
..................................................ATATTGTCCTGTCACGGCAGTA................................................................................................ 22 1 1 15.00 15 6 0 5 0 3 1
..................................................ATATTGTCCTGTCACAACAGTA................................................................................................ 22 1 1 15.00 15 2 0 3 1 1 8
..................................................ATATTGTCCTGTCACAGCGGTA................................................................................................ 22 1 1 15.00 15 9 0 2 1 0 3
..................................................ATATTGTCCTGTCACAGCAGTCG............................................................................................... 23 2 1 15.00 15 11 3 0 1 0 0
..................................................ATATTGACCTGTCACAGCAGTA................................................................................................ 22 1 1 15.00 15 2 0 1 0 5 7
..................................................ATATTGTCCTGTCACAGCAGTCT............................................................................................... 23 1 1 15.00 15 10 2 0 1 2 0
..................................................ATATTGTCCTGTCACAGCAGTTA............................................................................................... 23 2 1 15.00 15 7 3 0 2 3 0
..................................................ATATTGTCTTGTCACAGCAGTA................................................................................................ 22 1 1 15.00 15 4 0 5 1 1 4
..................................................ATATTGTCCTGTCTCAGCAGT................................................................................................. 21 1 1 15.00 15 12 2 0 1 0 0
..................................................ATATTGTCATGTCACAGCAGTT................................................................................................ 22 2 1 14.00 14 14 0 0 0 0 0
..................................................ATGTTGTCCTGTCACAGCAGTA................................................................................................ 22 1 1 14.00 14 10 0 0 0 1 3
..................................................ATATTGTCCCGTCACAGCA................................................................................................... 19 1 1 14.00 14 14 0 0 0 0 0
..................................................ATATTTTCCTGTCACAGCA................................................................................................... 19 1 1 14.00 14 13 0 0 1 0 0
..................................................ATATTGTCCTGTCACAGCCG.................................................................................................. 20 1 1 14.00 14 5 0 0 9 0 0
..................................................ATATTGTCCTGTCACAGCAGTTAA.............................................................................................. 24 3 1 13.00 13 12 1 0 0 0 0
..................................................ATATTGTCCTGTCAAAGCAG.................................................................................................. 20 1 1 13.00 13 11 0 0 1 1 0
..................................................ATATTGTCCTATCACAGCAGTA................................................................................................ 22 1 1 13.00 13 5 0 3 1 2 2
..................................................ATATTATCCTGTCACAGCAGTA................................................................................................ 22 1 1 13.00 13 5 0 1 2 0 5
..................................................ATATTGTCCTGTCACAGCAATA................................................................................................ 22 1 1 13.00 13 4 0 1 1 2 5
..................................................ATATTGTCCTGTCACAGTAGTA................................................................................................ 22 1 1 13.00 13 6 0 2 0 1 4
..................................................AGAGTGTCCTGTCACAGCAGTA................................................................................................ 22 2 1 12.00 12 0 0 11 0 0 1
...................................................TATTGTCCTGTCACAGCAGTT................................................................................................ 21 1 1 12.00 12 10 0 0 1 1 0
..................................................ATATTGTCCTGCCACAGCA................................................................................................... 19 1 1 12.00 12 11 0 0 0 1 0
..................................................ATATTGTCCTGTCACAGGAGT................................................................................................. 21 1 1 12.00 12 9 0 0 3 0 0
..................................................ATATTGTCCTGTCACAACAG.................................................................................................. 20 1 1 12.00 12 10 0 0 2 0 0
..................................................ATATTGTCCTGTCACAGAAGTAA............................................................................................... 23 2 1 12.00 12 12 0 0 0 0 0
...................................................ATTTGTCCTGTCACAGCAGT................................................................................................. 20 2 1 12.00 12 9 2 1 0 0 0
..................................................ATATTGTCCTGTCACATCAGTT................................................................................................ 22 2 1 12.00 12 9 0 0 2 0 1
..................................................AGACTGTCCTGTCACAGCAGTA................................................................................................ 22 2 1 12.00 12 0 0 12 0 0 0
..................................................ATATTGTCCTGTCACATCATT................................................................................................. 21 2 1 11.00 11 0 0 0 9 1 1
.....................................................................................................................TTGTTGAGCGTCATTAGCAACA............................. 22 1 1 11.00 11 7 2 0 2 0 0
..................................................ATATTGTCCTGTCACATCAGTAA............................................................................................... 23 2 1 11.00 11 11 0 0 0 0 0
..................................................ATATCGTCCTGTCACAGCAG.................................................................................................. 20 1 1 11.00 11 10 0 0 0 1 0
..................................................ATATTGTCCTGTCAGAGCAGT................................................................................................. 21 1 1 11.00 11 6 2 0 3 0 0
..................................................ATATTGTCCTGTGACAGCAGT................................................................................................. 21 1 1 11.00 11 8 0 1 2 0 0
....................................................ATTGTCCTGTCACAGCAG.................................................................................................. 18 0 1 11.00 11 4 1 0 0 6 0
..................................................ATATTGTACTGTCACAGCAGTT................................................................................................ 22 2 1 11.00 11 11 0 0 0 0 0
..................................................ATATTGCCCTGTCACAGCA................................................................................................... 19 1 1 11.00 11 11 0 0 0 0 0
..................................................AAATTGTCCTGTCACAGCAGT................................................................................................. 21 1 1 10.00 10 3 0 5 0 2 0
..................................................ATATTGTCCTGTAACAGCAGTAA............................................................................................... 23 2 1 10.00 10 10 0 0 0 0 0
..................................................ATATTGTCCTGTCATAGCAG.................................................................................................. 20 1 1 10.00 10 10 0 0 0 0 0
..................................................ATATTGTTCTGTCACAGCAGTA................................................................................................ 22 1 1 10.00 10 4 0 5 1 0 0
..................................................AAATTGTCCTGTCACAGCAGTA................................................................................................ 22 1 1 10.00 10 1 0 7 0 1 1
..................................................ATATCGTCCTGTCACAGCAGTA................................................................................................ 22 1 1 10.00 10 6 0 0 0 1 3
..................................................ATATTGTCCTGTCACAGCTGTA................................................................................................ 22 1 1 10.00 10 5 0 1 2 0 2
...................................................TATTGTCCTGTCACAGCAGTAT............................................................................................... 22 0 1 10.00 10 1 0 0 0 9 0
..................................................ATATTGTCCTGTCACAGCAGAA................................................................................................ 22 1 1 10.00 10 6 0 0 0 1 3
..................................................ATATTGTCCGGTCACAGCAGT................................................................................................. 21 1 1 10.00 10 2 1 2 4 1 0
..................................................ATATTGTCCCGTCACAGCAG.................................................................................................. 20 1 1 10.00 10 6 2 0 1 1 0
..................................................ATATTGTCCTGTCCCAGCAGTA................................................................................................ 22 1 1 10.00 10 5 0 2 1 0 2
..................................................ATATTTTCCTGTCACAGCAGTAA............................................................................................... 23 2 1 10.00 10 8 1 1 0 0 0
..................................................ATATTGTCCTTTCACAGCAGTAA............................................................................................... 23 2 1 9.00 9 7 0 0 0 1 1
...................................................TATTGTCCTGTCACAGCA................................................................................................... 18 0 1 9.00 9 5 0 0 0 4 0
..................................................ATATTGTCCTGTCACAGCG................................................................................................... 19 1 1 9.00 9 9 0 0 0 0 0
..................................................ATATTGTCCTATCACAGCAG.................................................................................................. 20 1 1 9.00 9 8 0 0 0 1 0
..................................................ATATTGTCCTGTCCCAGCAG.................................................................................................. 20 1 1 9.00 9 6 0 0 3 0 0
..................................................GTATTGTCCTGTCACAGCAGTA................................................................................................ 22 1 1 9.00 9 5 0 1 0 0 3
..................................................ATATTGTCCTGTCACAGCAC.................................................................................................. 20 1 1 9.00 9 7 0 1 1 0 0
..................................................ATATTGTCCTGTCATAGCAGTA................................................................................................ 22 1 1 9.00 9 5 0 0 1 1 2
..................................................ATTTTGTCCTGTCACAGCAGTA................................................................................................ 22 1 1 9.00 9 6 0 1 0 1 1
.................................................CATATTGTCCTGTCACAGCAG.................................................................................................. 21 1 1 8.00 8 7 0 0 0 1 0
..................................................ATATTGTCCTGTAACAGCAGTT................................................................................................ 22 2 1 8.00 8 7 0 0 0 0 1
..................................................ATATTGTCCTGTCACAGT.................................................................................................... 18 1 1 8.00 8 8 0 0 0 0 0
..................................................ATATTGTGCTGTCACAGCAGT................................................................................................. 21 1 1 8.00 8 5 2 0 0 0 1
..................................................AGACTGTCCTGTCACAGCAGT................................................................................................. 21 2 1 8.00 8 0 0 7 1 0 0
..................................................ATAATGTCCTGTCACAGCA................................................................................................... 19 1 1 7.00 7 7 0 0 0 0 0
..................................................ATACTGTCCTGTCACAGCAG.................................................................................................. 20 1 1 7.00 7 5 1 1 0 0 0
..................................................ATATTGTCGTGTCACAGCAGT................................................................................................. 21 1 1 7.00 7 6 0 0 1 0 0
..................................................ATATTGTCCTGTCACAGCAGTGC............................................................................................... 23 2 1 7.00 7 5 0 0 1 1 0
.....................................................................................................................TTGTTGAGCGTCATTAGCAACG............................. 22 0 1 7.00 7 7 0 0 0 0 0
..................................................ATATTGTCCTGTCACACCAG.................................................................................................. 20 1 1 7.00 7 6 0 0 1 0 0
..................................................ATATTGTCCAGTCACAGCAGTA................................................................................................ 22 1 1 7.00 7 3 0 2 1 0 1
..................................................ATAGTGTCCTGTCACAGCA................................................................................................... 19 1 1 7.00 7 7 0 0 0 0 0
..................................................ATATTGTCCTGTCACAGCGG.................................................................................................. 20 1 1 7.00 7 7 0 0 0 0 0
..................................................ATATTGCCCTGTCACAGCAG.................................................................................................. 20 1 1 7.00 7 7 0 0 0 0 0
..................................................ATATTGTCCTGTCACATCATTA................................................................................................ 22 2 1 7.00 7 0 0 0 3 0 4
..................................................ATATTGTCCTGTCACATCAGTC................................................................................................ 22 2 1 7.00 7 0 0 4 1 0 2
..................................................ATATTGTCCTGGCACAGCAGTA................................................................................................ 22 1 1 7.00 7 2 0 0 0 0 5
..................................................TGATTGTCCTGTCACAGCAGT................................................................................................. 21 2 1 7.00 7 0 0 7 0 0 0
..................................................ACATTGTCCTGTCACAGCAG.................................................................................................. 20 1 1 7.00 7 7 0 0 0 0 0
....................................................ATATTCCTGTCACAGCAGT................................................................................................. 19 2 3 7.00 21 19 2 0 0 0 0
...................................................ATATGTCCTGTCACAGCAGT................................................................................................. 20 3 2 6.50 13 12 1 0 0 0 0
..................................................AGATTGTACTGTCACAGCAGTA................................................................................................ 22 2 2 6.50 13 0 0 13 0 0 0
..................................................ATATTGTACTGTCACAGCAGTAA............................................................................................... 23 2 1 6.00 6 6 0 0 0 0 0
..................................................ATATTGTTCTGTCACAGCA................................................................................................... 19 1 1 6.00 6 5 0 0 1 0 0
..................................................ATATTTTCCTGTCACATCAGT................................................................................................. 21 2 1 6.00 6 3 0 0 1 0 2
..................................................ATATTGTCCTGTCACAGTAG.................................................................................................. 20 1 1 6.00 6 4 1 0 1 0 0
..................................................ACATTGTCCTGTCACAGCA................................................................................................... 19 1 1 6.00 6 5 0 0 1 0 0
..................................................ATATTGTCCTGTCACAGCATTT................................................................................................ 22 2 1 6.00 6 6 0 0 0 0 0
..................................................AGATTGTCCTGTCACAGCAGGA................................................................................................ 22 2 1 6.00 6 0 0 6 0 0 0
..................................................ATATTCTCCTGTCACAGCAG.................................................................................................. 20 1 1 6.00 6 5 1 0 0 0 0
..................................................ATATTGTCCCCTCACAGCAGT................................................................................................. 21 2 1 6.00 6 4 2 0 0 0 0
..................................................ATATCGTCCTGTCACAGCA................................................................................................... 19 1 1 6.00 6 6 0 0 0 0 0
..................................................ATGTTGTCCTGTCACAGCAGTT................................................................................................ 22 2 1 6.00 6 6 0 0 0 0 0
..................................................ATATTGTCCTGTCACAGCAGTTC............................................................................................... 23 2 1 6.00 6 4 0 0 2 0 0
..................................................ATACTGTCCTGTCACAGCA................................................................................................... 19 1 1 6.00 6 5 0 0 1 0 0
..................................................ATATTGTCCTGTCACAGCAGTGG............................................................................................... 23 2 1 6.00 6 6 0 0 0 0 0
..................................................ATATTATCCTGTCACAGCAG.................................................................................................. 20 1 1 6.00 6 4 0 0 2 0 0
..................................................ATTTTGTCCTGTCACAGCAG.................................................................................................. 20 1 1 6.00 6 6 0 0 0 0 0
..................................................ATATTGTCCTGTTACAGCA................................................................................................... 19 1 1 6.00 6 6 0 0 0 0 0
.....................................................TTGTCCTGTCACAGCAGT................................................................................................. 18 0 1 6.00 6 2 0 0 2 2 0
..................................................ATATTGTCCTGTCGCAGCAG.................................................................................................. 20 1 1 6.00 6 4 1 0 1 0 0
...................................................TATTGTCCTGTCACAGCAGTAA............................................................................................... 22 1 1 6.00 6 2 1 0 0 3 0
....................................................ATAGTCCTGTCACAGCAGT................................................................................................. 19 1 1 5.00 5 2 1 1 0 1 0
..................................................ATATTGTCCTGTCACACCA................................................................................................... 19 1 1 5.00 5 5 0 0 0 0 0
..................................................ATATTGTACTGTCACATCAGT................................................................................................. 21 2 1 5.00 5 1 0 2 1 0 1
.....................................................TTGTCCTGTCACAGCAGTA................................................................................................ 19 0 1 5.00 5 2 0 2 0 0 1
..................................................ATATTGTCCTGTCACAGTA................................................................................................... 19 1 1 5.00 5 4 0 0 1 0 0
..................................................AGATTGTCCTGTCACAGCAGTC................................................................................................ 22 2 1 5.00 5 0 0 5 0 0 0
..................................................ATATTGTCCTGTCACAGCAGTAAT.............................................................................................. 24 1 1 5.00 5 3 0 1 1 0 0
.....................................................ATGTCCTGTCACAGCAGT................................................................................................. 18 1 1 5.00 5 5 0 0 0 0 0
..................................................ATATTGTCCTGTCACGGCAG.................................................................................................. 20 1 1 5.00 5 3 0 0 2 0 0
..................................................ATATTGTCCTGTCACAGCAGTTGA.............................................................................................. 24 3 1 5.00 5 5 0 0 0 0 0
..................................................ATATTGGCCTGTCACAGCA................................................................................................... 19 1 1 5.00 5 2 0 0 3 0 0
..................................................ATCTTGTCCTGTCACAGCA................................................................................................... 19 1 1 5.00 5 5 0 0 0 0 0
..................................................ATGTTGTCCTGTCACAGCAG.................................................................................................. 20 1 1 5.00 5 5 0 0 0 0 0
..................................................ATATTGTCCTGTCACAGCATTC................................................................................................ 22 2 1 5.00 5 0 0 4 1 0 0
..................................................ATATTGTCCTGTCACAGCAGCAA............................................................................................... 23 2 1 5.00 5 5 0 0 0 0 0
..................................................ATATTGTCCTGTCGCAGCAGTAA............................................................................................... 23 2 1 5.00 5 5 0 0 0 0 0
..................................................ATATTGTCCTGACACAGCAGTA................................................................................................ 22 1 1 5.00 5 3 0 0 0 1 1
..................................................ATATTGTCATGTCACAGAAGT................................................................................................. 21 2 1 5.00 5 5 0 0 0 0 0
.............................................................................................TACTGCTGGGTCGGGGCATTAAC.................................................... 23 0 1 5.00 5 4 0 0 0 0 1
..................................................ATATTGTCCTGTCACGGCAGTT................................................................................................ 22 2 1 5.00 5 4 0 0 0 1 0
..................................................ATATAGTCCTGTCACAGCAGT................................................................................................. 21 1 1 5.00 5 4 0 1 0 0 0
..................................................ATATTGTCCTGTCACAGAAGTT................................................................................................ 22 2 1 5.00 5 5 0 0 0 0 0
..................................................ATATTGTCCTGTCACAGCAGTTGT.............................................................................................. 24 2 1 5.00 5 3 1 0 0 1 0
..................................................ATATTGTCCTGTCACCGCA................................................................................................... 19 1 1 5.00 5 5 0 0 0 0 0
..................................................AGAATGTCCTGTCACAGCAGTA................................................................................................ 22 2 1 5.00 5 0 0 5 0 0 0
..................................................AGCTTGTCCTGTCACAGCAGTA................................................................................................ 22 2 2 4.50 9 0 0 9 0 0 0
..................................................ATATTGTCCTGTCACAGCCGC................................................................................................. 21 2 1 4.00 4 1 0 0 2 0 1
..................................................ATATTGTCCTGTCACCGCAG.................................................................................................. 20 1 1 4.00 4 4 0 0 0 0 0
..................................................CTATTGTCCTGTCACAGCAGTA................................................................................................ 22 1 1 4.00 4 3 0 0 0 0 1
..................................................ATATTGTCCTGTCACGGCA................................................................................................... 19 1 2 4.00 8 7 0 0 1 0 0
..................................................ATAGTGTCCTGTCACAGCAG.................................................................................................. 20 1 1 4.00 4 4 0 0 0 0 0
..................................................ATATGGTCCTGTCACAGCAGTA................................................................................................ 22 1 1 4.00 4 2 0 2 0 0 0
..................................................CTATTGTCCTGTCACAGCAG.................................................................................................. 20 1 1 4.00 4 2 0 0 1 0 1
..................................................ATATTCTCCTGTCACAGCA................................................................................................... 19 1 1 4.00 4 4 0 0 0 0 0
..................................................AGATTGTCCTGCCACAGCAGTA................................................................................................ 22 2 1 4.00 4 0 0 4 0 0 0
..................................................ATGTTGTCCTGTCACAGCA................................................................................................... 19 1 1 4.00 4 4 0 0 0 0 0
..................................................ATATTGTCCTGTCACCGCAGTT................................................................................................ 22 2 1 4.00 4 1 1 0 1 0 1
..................................................AGATTGTCCTGTCAAAGCAGTA................................................................................................ 22 2 1 4.00 4 0 0 4 0 0 0
..................................................ATATGGTCCTGTCACAGCAGT................................................................................................. 21 1 1 4.00 4 3 0 0 1 0 0
..................................................AGATTGTCCTGTCAAAGCAGT................................................................................................. 21 2 1 4.00 4 0 0 4 0 0 0
..................................................ATATTGTCCTGTCACCGCCGT................................................................................................. 21 2 1 4.00 4 1 0 0 3 0 0
..................................................ATATTGTAATGTCACAGCAGTA................................................................................................ 22 2 1 4.00 4 0 0 4 0 0 0
..................................................ATATTGTCCTGTCACCGCAGTAA............................................................................................... 23 2 1 4.00 4 4 0 0 0 0 0
..................................................ATATTGTCCTGTTACAGCAGTAA............................................................................................... 23 2 1 4.00 4 4 0 0 0 0 0
..................................................ATATTGTCCGGTCACAGCAGTA................................................................................................ 22 1 1 4.00 4 2 0 1 0 1 0
..................................................AGATTGGCCTGTCACAGCAGT................................................................................................. 21 2 1 4.00 4 0 0 1 2 0 1
..................................................ATATTGTCCCGTCACAGCAGTT................................................................................................ 22 2 1 4.00 4 4 0 0 0 0 0
....................................................ATTGTCCTGTCACAGCAGTAA............................................................................................... 21 1 1 4.00 4 4 0 0 0 0 0
..................................................ATATTGTCCTGTCACAGGAGTA................................................................................................ 22 1 1 4.00 4 0 0 0 0 2 2
..................................................TTATTGTCCTGTCACAGCAG.................................................................................................. 20 1 1 4.00 4 1 0 0 0 3 0
..................................................ATATTGTCCTGTCACAGCATA................................................................................................. 21 2 1 4.00 4 3 0 0 0 1 0
..................................................GTATTGTCCTGTCACAGCAG.................................................................................................. 20 1 1 4.00 4 4 0 0 0 0 0
..................................................ATATTGTCCTGTCACAGCAGCT................................................................................................ 22 2 1 4.00 4 4 0 0 0 0 0
..................................................ATATTTTCCTGTCACAGCAGTT................................................................................................ 22 2 1 4.00 4 4 0 0 0 0 0
.....................................................................................................................TTGTTGAGCGTCATTAGCT................................ 19 1 1 4.00 4 3 0 0 1 0 0
..................................................ATATTGTCCTGTCACAGCAGTTGC.............................................................................................. 24 3 1 4.00 4 3 0 0 1 0 0
...................................................TATTGTCATGTCACAGCAGT................................................................................................. 20 1 1 4.00 4 2 0 0 0 2 0
..................................................ATATTGTCCTGTCACAGCAGTAAAA............................................................................................. 25 3 1 4.00 4 3 0 0 0 1 0
..................................................ATATTGTCCTGTTACATCAGT................................................................................................. 21 2 1 4.00 4 1 0 0 3 0 0
..................................................ATATTGTCCTGTTACAGCAG.................................................................................................. 20 1 1 4.00 4 3 0 0 1 0 0
..................................................ATCTTGTCCTGTCACAGCAGTT................................................................................................ 22 2 1 4.00 4 4 0 0 0 0 0
..................................................ATATTGTCCTGCCACAGCAGTAA............................................................................................... 23 2 1 4.00 4 3 1 0 0 0 0
..................................................ATATTGTCCTTTCACATCAGTA................................................................................................ 22 2 1 4.00 4 0 0 0 2 0 2
.................................................ATCATTGTCCTGTCACAGCAGT................................................................................................. 22 3 1 4.00 4 3 1 0 0 0 0
..................................................AGATTGTCCTGTCACAGCTGT................................................................................................. 21 2 1 4.00 4 0 0 2 1 0 1

Anti-sense strand reads

GACTTTTCCTATATATGGTACATATGGTACTTTAGCCTGCGAACGGTAACTATAACAGGACAGTGTCGTCATAACATTGTGATATAATATCGAATGACGACCCAGCCCCGTAATTGTAACAACTCGCAGTAATCGTTGCTCGCCGCCAGTCCTTTTTTCGCTCTTTTT

************************************.((((((((.((.((.((.(((((((((.((((((((((((((.......))))))..)))))))))).))))))).)).)).)).))))))))...*********************************** 		Read size # Mismatch Hit Count Total Norm Total V107

male body
............................................................................................................CGTAATTGTAACAACTCGCAGTAA.................................... 24 0 1 1.00 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Type Alignment
droEre2 scaffold_4820:6627793-6627960 + der_7 confident CTGA-------------A----AAGGATATATAC---C---A-----------------TGTATA---------------CCATGAAA-------------TCG-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------G----------------------------CGGCGGTCAG-GAAA-AAA----------------------------------------GC--G--------AGAAAAA
droYak3 3R:25064531-25064685 + dya_5 confident CTAA-------------A----AAGGATATT----------------------------------------------------CGAAT-------------TGG-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------G----------------------------AGGCGGCCAG-GAAAAAAG----------------------------------------GC--G--------AGAAAAA
droSec2 scaffold_13:202488-202653 - dse_8 confident TTGA-------------A----AAGGATATATGC-------A-----------------TATATA---------------CCATGAAA-------------TCG-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------G----------------------------CGGCGGACAG-GAAA--AC----------------------------------------CT--G--------AGAAAAA
droSim2 3r:20926949-20927114 - dsi-mir-1000 Known_mirbase CTGA-------------A----AAGGATATATAC-------A-----------------TATATA---------------CCGTGAAA-------------TCG-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTTACACTATAT--TATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------G----------------------------CGGCGGACAG-GAAA--AC----------------------------------------CT--G--------AGAAAAA
dm3 chr3R:21414550-21414715 - dme-mir-1000 Known_mirbase CTAA-------------A----AAGGATATATAC-------A-----------------TATATA---------------CCATGAAA-------------TCG-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------G----------------------------CGGCGGACAG-GAAA--AC----------------------------------------CT--G--------AGAAAAA
droEug1 scf7180000409798:1136832-1136999 + CGGA-------------A----AAGGATATATAT-------A-----------------TATATG---------------CCACAAAA-------------TCG-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAATACTATATCTTATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------G----------------------------TGGCGGCAAG-GAAA--AC----------------------------------------CC--G--------AGGAAAA
droBia1 scf7180000302136:2260800-2260973 - TCCA-------------A----GA-GATAGATCC---CAGAA-----------------TACAT----------------CCATCGAA-------------TCG-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAC--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------GAGG-----------------CGG-----CGGCGGCAAG-GAAA--AC----------------------------------------CC--G--------AGGAAAA
droTak1 scf7180000415257:294594-294768 - CGAA-------------A--AAGAGGATATATAC-GCC---A-----------------TGTACA------------------CAAAA-------------TCG-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------GAGG-----------------CGG-----CGGCGGCAAG-GAAA--ACC---------------------------------------CC--G--------AGGAAAA
droEle1 scf7180000491280:3122803-3122964 - TTTA-------------T----ATATATATATAT-A-T---ATG---------------TATACA---------------CTACGAAA-------------TCG-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTTTATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------G---------------------------------------GAAA--AC----------------------------------------CC--G--------AGGAAAA
droRho1 scf7180000779501:511368-511525 + CGAA-------------A----AAGGATATAT--------------------------------G---------------TCACGAAA-------------TCG-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------G----------------------------AGGCGGCCAG-GAAA--AG----------------------------------------CC--G--------ACGAAAA
droFic1 scf7180000454055:1331146-1331308 - CCAA-------------A----TCGGATATAT--------------------------------T---------------CCATGGAA-------------TCG-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGAAA-ACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------CAGG-----------------CGG-----CGGCGGCAAG-GAAA--AG----------------------------------------CC--G--------AGGAAAA
droKik1 scf7180000302639:1623480-1623639 + CCAT-------------A-----AGGATATATC-----------------------------------------------GCG-CAAA-------------TCG-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------G----------------------------CAGCG------GAAA--ACT---------------------------------------CC--GAAACTCAAAGGAAAA
droAna3 scaffold_13340:3670400-3670564 - dan_4 confident AAGAAAAACAGGACTATA----AAGGATATATGGTGTC---A-----------------TAT-----------------------------------------A-GACGCTTGCCGATGATATTGTCCTGTCACAGCAGTATTGTAATTCTATACTATATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------G----------------------------G-------AG-GAAA--AG----------------------------------------TC--A--------AGGAAAA
droBip1 scf7180000396712:682178-682340 + ATGAAAAACTGGACTATA----AAGGATATAC-------------------------------------------------CGTCATA-------------T-A-GACGCTTGCCGATGATATTGTCCTGTCACAGCAGTATTGTAATTCTATACTATATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------G----------------------------G-------AG-GAAA--AG----------------------------------------TC--A--------AGGAAAA
dp5 2:21158110-21158322 - dps-mir-1000 Known_mirbase GCAT-------------A--TAGAAGATA----C-------A-----------------TATATATCGAATTAC-ATACGGCGTCGGATCGGAGCAGATGAGAG-GGCGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAAC--TTAAT--TATAGCCTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGCCATTGGCAACAA--------AGAGAAGGAGAAGCTACAAAGCTACAAAGCTAC-----G-GAAA-AAT----------------------------------------GC--T--------ACAGAAA
droPer2 scaffold_3:3932616-3932811 - dpe_6 confident GCAT-------------A--TAGAAGATA----C-------A-----------------TATATATCGAATTAC-ATACGGCGTCGGATCGGAGCAGATGAGAG-GGCGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAAC--TTAAT--TATAGCCTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGCCATTGGCAACAA--------AGAG-----------------CTACAAAGCTAC-----G-GAAA-AAT----------------------------------------GC--T--------ACAGAAA
droWil2 scf2_1100000004943:14638691-14638875 + dwi_7 confident CTGC-------------T----------AT--CC-------A-----------------TCTA-------------------AC--AA-------------AAG-AGAGCTTGCCAGTGATATTGTCCTGTCACAGCAGTATAGTAACA-TAT-T--CATTTCGTACTGCTGAGCCGGGGCATTAACATTGTTGAGCGTCTGTGGCAACGA--------G----------------------------CGGA---------AA--ACTCTACTTCTGATGATGATAATAATGATTCAAGTCAAAAGGGAACG-------AAAAAAAA
droVir3 scaffold_12855:6810243-6810429 - dvi-mir-1000 Known_mirbase ATAA-------------A----CTGCATATATTT---G---ATATATACAGGCGGCATATATGTGTCTGATTGTGATATATCGTC-GA-------------TCGTTGCGCTTGCCAGTGATATTGTCCTGTCACAGCAGTATTGTAC-GTTAAGC--AATTG-GTACTGCTGAGCCGGGGCATTAACATTGTTGAGCGTCGTTAGCAACCA--------A-----------------------------------------AA--A-----------------------------------------GCCAG-------AAAAGCCA
droMoj3 scaffold_6540:25791507-25791660 + dmo_3 confident CTGA-------------TTGGATTGGATAT--CC-------A-----------------TCTAT-------------------C--AATCAACGCGTCTATTAT-AGCGCTTGCCAGTGATATTGTCCTGTCACAGCAGTATTGTAAA-TTAAGC--AATTG-GTACTGCTGAGCCGGGGCATTAACATTGTTGAGCGTCGTTAGCAACCA--------G----------------------------------------------------------------------------------------------------AAGAAAT
droGri2 scaffold_14906:2964677-2964837 - dgr_8 confident G------------------------GATATATAT-------A-----------------TATATA------------------TTTAA-------------TCGTTGCGCTTGCCAGTGATATTGTCCTGTCACAGCAGTATTGTTAA-TTAAGC--AATTG-GTACTGCTGAGCCGGGGCATTAACATTGTTGAGCGTTGCTAGCAACTAAAAAGCGAG----------------------------CAGCGAGCAGCGAGA--AG----------------------------------------CA--G--------AG---AA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
CTGA-------------A----AAGGATATATAC---C---A-----------------TGTATA---------------CCATGAAA-------------TCG-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------G----------------------------CGGCGGTCAG-GAAA-AAA----------------------------------------GC--G--------AGAAAAASizeHit CountTotal NormTotalM055

Female-body		M057

Embryo		V060

Head		V040

Embryo		V107

Male-body		V108

Head		GSM1528801

follicle cells
.......................................................................................................................ATATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................21170255.0070255182722676048113111250477320
.......................................................................................................................ATATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................22117908.001790813696249559272337666320
.......................................................................................................................ATATTGTCCTGTCACAGCAG............................................................................................................................................................................................2017295.007295536445991339957040
.......................................................................................................................ATATTGTCCTGTCACAGCA.............................................................................................................................................................................................1915197.00519728421933049130
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAA.........................................................................................................................................................................................2311938.001938951486279116250
.......................................................................................................................ATATTGTCCTGTCACAGCAGTT..........................................................................................................................................................................................2211772.0017724451281512014600
.......................................................................................................................ATATTGTCCTGTCACAGCAGC...........................................................................................................................................................................................211551.0055114152269980
........................................................................................................................TATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................201263.002631247121111080
........................................................................................................................TATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................211220.002209418491940
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAT.........................................................................................................................................................................................231216.00216751312331100
.......................................................................................................................ATATTGTCCTGTCACAGCAGA...........................................................................................................................................................................................211180.001801016281530
......................................................................................................................................................................CTGCTGGGTCGGGGCATTAACA...........................................................................................................................................221124.00124142223163460
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAAA........................................................................................................................................................................................241107.0010740414940
.......................................................................................................................ATATTGTCCTGTCACAGCAGTC..........................................................................................................................................................................................221106.0010633115913350
.........................................................................................................................ATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................19190.00901036114560
.......................................................................................................................ATATTGTCCTGTCACAGCAGG...........................................................................................................................................................................................21182.00822491333300
.......................................................................................................................ATATTGTCCTGTCACAGCAGTG..........................................................................................................................................................................................22167.0067824100430
.......................................................................................................................ATATTGTCCTGTCACAGC..............................................................................................................................................................................................18164.006421100600
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAG.........................................................................................................................................................................................23150.005060101420
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAC.........................................................................................................................................................................................23146.004662530300
........................................................................................................................TATTGTCCTGTCACAGCAG............................................................................................................................................................................................19144.004439000050
.........................................................................................................................ATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................20144.0044514000250
.......................................................................................................................ATATTGTCCTGTCACAGCAT............................................................................................................................................................................................20143.004300700360
.......................................................................................................................ATATTGTCCTGTCACAGCAGTGA.........................................................................................................................................................................................23137.003730002320
......................................................................................................................................................................CTGCTGGGTCGGGGCATTAAC............................................................................................................................................21133.003311615190
.......................................................................................................................ATATTGTCCTGTCACAGCAGTTG.........................................................................................................................................................................................23130.003020301240
.......................................................................................................................ATATTGTCCTGTCACAGCAGTCA.........................................................................................................................................................................................23119.001900201160
.......................................................................................................................ATATTGTCCTGTCACAGCAA............................................................................................................................................................................................20119.001900200170
.............................................................................................................................................TTGTAACACTATAT--TATAGCTTA.................................................................................................................................................................23118.001800070110
.......................................................................................................................ATATTGTCCTGTCACAGCAGTCG.........................................................................................................................................................................................23115.001500103110
.......................................................................................................................ATATTGTCCTGTCACAGCAGTTA.........................................................................................................................................................................................23115.00153020370
.......................................................................................................................ATATTGTCCTGTCACAGCAGTTAA........................................................................................................................................................................................24113.001300001120
........................................................................................................................TATTGTCCTGTCACAGCAGTT..........................................................................................................................................................................................21112.001210100100
............................................................................................................................................................................................TTGTTGAGCGTCATTAGCAACA.....................................................................................................................22111.00110020270
.........................................................................................................................ATTGTCCTGTCACAGCAG............................................................................................................................................................................................18111.00116000140
........................................................................................................................TATTGTCCTGTCACAGCAGTAT.........................................................................................................................................................................................22110.00109000010
........................................................................................................................TATTGTCCTGTCACAGCA.............................................................................................................................................................................................1819.0094000050
.......................................................................................................................ATATTGTCCTGTCACAGCG.............................................................................................................................................................................................1919.0090000090
.......................................................................................................................ATATTGTCCTGTCACAGCAC............................................................................................................................................................................................2019.0090110070
.......................................................................................................................ATATTGTCCTGTCACAGT..............................................................................................................................................................................................1818.0080000080
.......................................................................................................................ATATTGTCCTGTCACAGCAGTGC.........................................................................................................................................................................................2317.0071010050
............................................................................................................................................................................................TTGTTGAGCGTCATTAGCAACG.....................................................................................................................2217.0070000070
.......................................................................................................................ATATTGTCCTGTCACAGCAGTTC.........................................................................................................................................................................................2316.0060020040
.......................................................................................................................ATATTGTCCTGTCACAGCAGTGG.........................................................................................................................................................................................2316.0060000060
..........................................................................................................................TTGTCCTGTCACAGCAGT...........................................................................................................................................................................................1816.0062020020
........................................................................................................................TATTGTCCTGTCACAGCAGTAA.........................................................................................................................................................................................2216.0063000120
..........................................................................................................................TTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................1915.0050201020
.......................................................................................................................ATATTGTCCTGTCACAGCAGTTGA........................................................................................................................................................................................2415.0050000050
....................................................................................................................................................................TACTGCTGGGTCGGGGCATTAAC............................................................................................................................................2315.0050001040
.........................................................................................................................ATTGTCCTGTCACAGCAGTAA.........................................................................................................................................................................................2114.0040000040
.......................................................................................................................ATATTGTCCTGTCACAGCATA...........................................................................................................................................................................................2114.0041000030
.......................................................................................................................ATATTGTCCTGTCACAGCAGCT..........................................................................................................................................................................................2214.0040000040
............................................................................................................................................................................................TTGTTGAGCGTCATTAGCT........................................................................................................................1914.0040010030
.......................................................................................................................ATATTGTCCTGTCACAGCAGTTGC........................................................................................................................................................................................2414.0040010030
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAAAA.......................................................................................................................................................................................2514.0041000030
droYak3
CTAA-------------A----AAGGATATT----------------------------------------------------CGAAT-------------TGG-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------G----------------------------AGGCGGCCAG-GAAAAAAG----------------------------------------GC--G--------AGAAAAASizeHit CountTotal NormTotalM026

Head		M043

Female-body		M056

Embryo		V046

Embryo		V052

Head		V058

Head		V120

Male-body		SRR1275488

Male larvae		SRR1275486

Male prepupae		SRR1275484

Male prepupae		GSM1528802

follicle cells
.......................................................................................................................ATATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................21148530.0048530144111801208912174802513911594250
.......................................................................................................................ATATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................22120973.0020973977624129133804111514703492250
.......................................................................................................................ATATTGTCCTGTCACAGCAG............................................................................................................................................................................................2017246.0072462818474571017892068241050
.......................................................................................................................ATATTGTCCTGTCACAGCAGTT..........................................................................................................................................................................................2211269.001269173181846971970000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAA.........................................................................................................................................................................................231693.00693554142126433230000
.......................................................................................................................ATATTGTCCTGTCACAGCAGC...........................................................................................................................................................................................211683.00683170029203618410000
.......................................................................................................................ATATTGTCCTGTCACAGCA.............................................................................................................................................................................................191677.0067760220221737330000
.......................................................................................................................ATATTGTCCTGTCACAGCAGG...........................................................................................................................................................................................211351.003511670646610710000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTC..........................................................................................................................................................................................221169.00169636612305200000
......................................................................................................................................................................CTGCTGGGTCGGGGCATTAACA...........................................................................................................................................221164.0016422784352602060
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAT.........................................................................................................................................................................................231145.001452246214232810000
......................................................................................................................................................................CTGCTGGGTCGGGGCATTAAC............................................................................................................................................211129.0012960108131100000
........................................................................................................................TATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................201107.0010707740121400000
.......................................................................................................................ATATTGTCCTGTCACAGCAGA...........................................................................................................................................................................................211107.001074411207700000
.......................................................................................................................ATATTGTCCTGTCACAGCAC............................................................................................................................................................................................20185.0085760201600000
........................................................................................................................TATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................21179.00791432352500000
.......................................................................................................................ATATTGTCCTGTCACAGC..............................................................................................................................................................................................18175.0075603503400000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTCA.........................................................................................................................................................................................23148.00480100242030000
.......................................................................................................................ATATTGTCCTGTCACAGCAT............................................................................................................................................................................................20145.00452000103300000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTG..........................................................................................................................................................................................22143.00437241181100000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAAA........................................................................................................................................................................................24138.00383400111910000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAC.........................................................................................................................................................................................23134.00343512131000000
........................................................................................................................TATTGTCCTGTCACAGCAG............................................................................................................................................................................................19133.0033230001000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAG.........................................................................................................................................................................................23126.0026270141200000
.........................................................................................................................ATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................19126.0026112106510000
............................................................................................................................................................................................TTGTTGAGCGTCATTAGCAAC......................................................................................................................21125.0025200300200000
.........................................................................................................................ATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................20125.0025041911000000
.......................................................................................................................ATATTGTCCTGTCACAGCAA............................................................................................................................................................................................20121.0021012061200000
.............................................................................................................................................TTGTAACACTATAT--TATAGCTTA.................................................................................................................................................................23118.0018004120200000
.......................................................................................................................ATATTGTCCTGTCACAGCAGCT..........................................................................................................................................................................................22116.0016000151000000
.......................................................................................................................ATATTGTCCTGTCACAGCC.............................................................................................................................................................................................19115.0015100021200000
............................................................................................................................................................................................TTGTTGAGCGTCATTAGC.........................................................................................................................18113.0013100101100000
.......................................................................................................................ATATTGTCCTGTCACAGCAGGT..........................................................................................................................................................................................22111.001100004700000
......................................................................................................................................................................CTGCTGGGTCGGGGCATTAA.............................................................................................................................................20110.001000810000010
......................................................................................................................................................................CTGCTGGGTCGGGGCATT...............................................................................................................................................18110.001050201200000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTGA.........................................................................................................................................................................................23110.001032011300000
.......................................................................................................................ATATTGTCCTGTCACAGCATC...........................................................................................................................................................................................2119.00900000900000
.........................................................................................................................ATTGTCCTGTCACAGCAG............................................................................................................................................................................................1818.00805001010010
.......................................................................................................................ATATTGTCCTGTCACAGCAGTTA.........................................................................................................................................................................................2318.00800007100000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTTC.........................................................................................................................................................................................2318.00810004300000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTTG.........................................................................................................................................................................................2318.00811003300000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTCC.........................................................................................................................................................................................2317.00700001600000
......................................................................................................................................................................CTGCTGGGTCGGGGCATTA..............................................................................................................................................1917.00700601000000
.......................................................................................................................ATATTGTCCTGTCACAGCATG...........................................................................................................................................................................................2117.00700003400000
......................................................................................................................................................................CTGCTGGGTCGGGGCATTAACT...........................................................................................................................................2217.00700700000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTTAA........................................................................................................................................................................................2416.00600002400000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTCG.........................................................................................................................................................................................2316.00601004100000
droSec2
TTGA-------------A----AAGGATATATGC-------A-----------------TATATA---------------CCATGAAA-------------TCG-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------G----------------------------CGGCGGACAG-GAAA--AC----------------------------------------CT--G--------AGAAAAASizeHit CountTotal NormTotalM054

Female-body		V113

Male-body		V114

Embryo		V115

Head
.......................................................................................................................ATATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................21145317.00453178114696604533765
.......................................................................................................................ATATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................22110064.001006442013659063602
.......................................................................................................................ATATTGTCCTGTCACAGCAG............................................................................................................................................................................................2015979.005979351204755349
.......................................................................................................................ATATTGTCCTGTCACAGCA.............................................................................................................................................................................................1913172.003172230193130
.......................................................................................................................ATATTGTCCTGTCACAGCAGTT..........................................................................................................................................................................................2211908.0019083377191779
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAA.........................................................................................................................................................................................231480.00480311597337
.......................................................................................................................ATATTGTCCTGTCACAGCAGA...........................................................................................................................................................................................211401.004014121384
........................................................................................................................TATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................201389.00389732934253
........................................................................................................................TATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................211209.0020940850111
......................................................................................................................................................................CTGCTGGGTCGGGGCATTAACA...........................................................................................................................................221179.001790615914
.......................................................................................................................ATATTGTCCTGTCACAGCAGC...........................................................................................................................................................................................21183.008305870
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAT.........................................................................................................................................................................................23164.0064240832
.........................................................................................................................ATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................19157.0057512427
........................................................................................................................TATTGTCCTGTCACAGCAG............................................................................................................................................................................................19147.0047200027
.........................................................................................................................ATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................20146.004621358
.......................................................................................................................ATATTGTCCTGTCACAGCAGTC..........................................................................................................................................................................................22136.003607524
.......................................................................................................................ATATTGTCCTGTCACAGC..............................................................................................................................................................................................18136.003640131
........................................................................................................................TATTGTCCTGTCACAGCAGTT..........................................................................................................................................................................................21128.002800028
.......................................................................................................................ATATTGTCCTGTCACAGCAGG...........................................................................................................................................................................................21128.0028120214
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAAA........................................................................................................................................................................................24127.002703024
.......................................................................................................................ATATTGTCCTGTCACAGCAA............................................................................................................................................................................................20122.002210021
.......................................................................................................................ATATTGTCCTGTCACAGCAGTG..........................................................................................................................................................................................22116.001600124
......................................................................................................................................................................CTGCTGGGTCGGGGCATTAAC............................................................................................................................................21115.001500132
.......................................................................................................................ATATTGTCCTGTCACAGT..............................................................................................................................................................................................18110.001000010
.......................................................................................................................ATATTGTCCTGTCACAGCAT............................................................................................................................................................................................2019.0092106
........................................................................................................................TATTGTCCTGTCACAGCAGTAA.........................................................................................................................................................................................2218.0082006
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAC.........................................................................................................................................................................................2318.0082015
......................................................................................................................................................................CTGCTGGGTCGGGGCATTA..............................................................................................................................................1918.0081061
........................................................................................................................TATTGTCCTGTCACAGCA.............................................................................................................................................................................................1817.0072014
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAG.........................................................................................................................................................................................2317.0071015
.......................................................................................................................ATATTGTCCTGTCACAGCATA...........................................................................................................................................................................................2116.0063012
........................................................................................................................TATTGTCCTGTCACAGCAGTAT.........................................................................................................................................................................................2216.0064020
.............................................................................................................................................TTGTAACACTATAT--TATAGTTTA.................................................................................................................................................................2315.0050041
.......................................................................................................................ATATTGTCCTGTCACAGCT.............................................................................................................................................................................................1924.5090009
......................................................................................................................................................................CTGCTGGGTCGGGGCATTT..............................................................................................................................................1914.0040004
..........................................................................................................................TTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................1914.0041012
.......................................................................................................................ATATTGTCCTGTCACAGCAGTTA.........................................................................................................................................................................................2314.0043001
.........................................................................................................................ATTGTCCTGTCACAGCAG............................................................................................................................................................................................1814.0042002
.......................................................................................................................ATATTGTCCTGTCACAGCAGTGG.........................................................................................................................................................................................2314.0041003
..........................................................................................................................TTGTCCTGTCACAGCAGT...........................................................................................................................................................................................1814.0041003
......................................................................................................................................................................CTGCTGGGTCGGGGCATT...............................................................................................................................................1814.0040022
.......................................................................................................................ATATTGTCCTGTCACAGCG.............................................................................................................................................................................................1914.0040004
.......................................................................................................................ATATTGTCCTGTCACAGCAGTCG.........................................................................................................................................................................................2313.0030102
.......................................................................................................................ATATTGTCCTGTCACAGCAGAT..........................................................................................................................................................................................2213.0030003
..........................................................................................................................TTGTCCTGTCACAGCAGTAA.........................................................................................................................................................................................2013.0031002
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAGA........................................................................................................................................................................................2413.0031011
.......................................................................................................................ATATTGTCCTGTCACAGCAGTCA.........................................................................................................................................................................................2313.0030003
.......................................................................................................................ATATTGTCCTGTCACAGCAC............................................................................................................................................................................................2013.0031002
.......................................................................................................................ATATTGTCCTGTCACAGCATC...........................................................................................................................................................................................2112.0020002
......................................................................................................................................................................CTGCTGGGTCGGGGCATTAACAA..........................................................................................................................................2312.0020011
.........................................................................................................................ATTGTCCTGTCACAGCAGTT..........................................................................................................................................................................................2012.0020002
.......................................................................................................................ATATTGTCCTGTCACAGCAGCT..........................................................................................................................................................................................2212.0020002
......................................................................................................................................................................CTGCTGGGTCGGGGCATTAACT...........................................................................................................................................2212.0020011
.......................................................................................................................ATATTGTCCTGTCACAGCAGTTAA........................................................................................................................................................................................2412.0020002
.......................................................................................................................ATATTGTCCTGTCACAGCGTA...........................................................................................................................................................................................2112.0020020
.......................................................................................................................ATATTGTCCTGTCACAGCAGTTG.........................................................................................................................................................................................2312.0020002
........................................................................................................................TATTGTCCTGTCACAGCAGA...........................................................................................................................................................................................2012.0021001
...........................................................................................................................TGTCCTGTCACAGCAGTA..........................................................................................................................................................................................1812.0020011
.......................................................................................................................ATATTGTCCTGTCACAGCTA............................................................................................................................................................................................2022.0040022
droSim2
CTGA-------------A----AAGGATATATAC-------A-----------------TATATA---------------CCGTGAAA-------------TCG-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTTACACTATAT--TATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------G----------------------------CGGCGGACAG-GAAA--AC----------------------------------------CT--G--------AGAAAAASizeHit CountTotal NormTotalM023

Head		M024

Male-body		M025

Embryo		M053

Female-body		O001

Testis		O002

Head		SRR553485

Ovary		SRR553486

Ovary		SRR553487

Ovary		SRR553488

Ovary		SRR618934

Ovary		V044

Embryo		SRR902008

Ovary		SRR902009

Testis		SRR1275487

Male larvae		SRR1275485

Male prepupae		SRR1275483

Male prepupae
.......................................................................................................................ATATTGTCCTGTCACAGCAG............................................................................................................................................................................................20120599.0020599177873353033750203001161902001000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................22113350.0013350288059151870533017435886304451903002
.......................................................................................................................ATATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................2119946.009946439010622486302345977475754142110100
.......................................................................................................................ATATTGTCCTGTCACAGCA.............................................................................................................................................................................................1913715.00371549562483311500361000000
.......................................................................................................................ATATTGTCCTGTCACAGC..............................................................................................................................................................................................1812697.00269747196046216300010100000
.......................................................................................................................ATATTGTCCTGTCACAGCAGC...........................................................................................................................................................................................211489.00489458101910000100000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGG...........................................................................................................................................................................................211447.00447388163520001000500000
.......................................................................................................................ATATTGTCCTGTCACAGCAC............................................................................................................................................................................................201359.003593522500000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAT.........................................................................................................................................................................................231308.0030813200528500100200000
......................................................................................................................................................................CTGCTGGGTCGGGGCATTAACA...........................................................................................................................................221187.0018717074108003008201100
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAA.........................................................................................................................................................................................231168.00168190050000464215401000
......................................................................................................................................................................CTGCTGGGTCGGGGCATTAAC............................................................................................................................................211101.0010113161007000101800000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTT..........................................................................................................................................................................................22191.00916922200000101500000
.........................................................................................................................ATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................20142.0042001103700000300000
........................................................................................................................TATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................21130.0030302601000410400000
.........................................................................................................................ATTGTCCTGTCACAGCAG............................................................................................................................................................................................18129.0029700002200000000000
........................................................................................................................TATTGTCCTGTCACAGCAG............................................................................................................................................................................................19128.0028171041500000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTG..........................................................................................................................................................................................22128.0028190300000000600000
........................................................................................................................TATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................20123.002330160500340100000
......................................................................................................................................................................CTGCTGGGTCGGGGCATT...............................................................................................................................................18122.0022122400400000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTC..........................................................................................................................................................................................22120.002091000000100900000
.......................................................................................................................ATATTGTCCTGTCACAGCAGA...........................................................................................................................................................................................21117.0017131000000010200000
........................................................................................................................TATTGTCCTGTCACAGCA.............................................................................................................................................................................................18115.0015000011400000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAAA........................................................................................................................................................................................24114.001420100000640100000
.........................................................................................................................ATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................19113.0013000001100100100000
.......................................................................................................................ATATTGTCCTGTCACAGCG.............................................................................................................................................................................................19113.0013130000000000000000
............................................................................................................................................................................................TTGTTGAGCGTCATTAGC.........................................................................................................................18111.001180300000000000000
............................................................................................................................................................................................TTGTTGAGCGTCATTAGCAAC......................................................................................................................21111.001180300000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTATT........................................................................................................................................................................................24110.0010000001000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCT.............................................................................................................................................................................................1929.5019190000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAA............................................................................................................................................................................................2019.00980100000000000000
........................................................................................................................TATTGTCCTGTCACAGCAGTAT.........................................................................................................................................................................................2217.00700000600000100000
......................................................................................................................................................................CTGCTGGGTCGGGGCATTAA.............................................................................................................................................2016.00601500000000000000
......................................................................................................................................................................CTGCTGGGTCGGGGCATTA..............................................................................................................................................1916.00610100400000000000
.......................................................................................................................ATATTGTCCTGTCACAGCC.............................................................................................................................................................................................1915.00550000000000000000
..........................................................................................................................TTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................1915.00500000100010300000
.............................................................................................................................................TTGTTACACTATAT--TATAGTTTA.................................................................................................................................................................2314.00400100000000300000
......................................................................................................................................................................CTGCTGGGTCGGGGCATA...............................................................................................................................................1814.00440000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCTT............................................................................................................................................................................................2024.00880000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAC.........................................................................................................................................................................................2314.00420010000000100000
.........................................................................................................................ATTGTCCTGTCACAGCAGTAT.........................................................................................................................................................................................2113.00300000300000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTCA.........................................................................................................................................................................................2313.00300000000000300000
............................................................................................................................................................................................TTGTTGAGCGTCATTAGCAACG.....................................................................................................................2213.00330000000000000000
.........................................................................................................................................................................CTGGGTCGGGGCATTAACA...........................................................................................................................................1913.00320100000000000000
............................................................................................................................................................................................TTGTTGAGCGTCATTAGCA........................................................................................................................1913.00330000000000000000
.......................................................................................................................ATATTGTCCTGTCACA................................................................................................................................................................................................1613.00300000000120000000
.......................................................................................................................ATATTGTCCTGTCACAGG..............................................................................................................................................................................................1813.00330000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGCT..........................................................................................................................................................................................2212.00200000000000200000
.........................................................................................................................................................................CTGGGTCGGGGCATTAAC............................................................................................................................................1812.00201100000000000000
..........................................................................................................................TTGTCCTGTCACAGCAGTAT.........................................................................................................................................................................................2012.00200000200000000000
.......................................................................................................................ATATTGTCCTGTCACAGCATA...........................................................................................................................................................................................2112.00200000000200000000
..........................................................................................................................TTGTCCTGTCACAGCAGTAA.........................................................................................................................................................................................2012.00220000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAAG...........................................................................................................................................................................................2112.00220000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTGG.........................................................................................................................................................................................2312.00220000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGT..............................................................................................................................................................................................1812.00220000000000000000
......................................................................................................................................................................CTGCTGGGTCGGGGCATTAACG...........................................................................................................................................2212.00200200000000000000
..........................................................................................................................TTGTCCTGTCACAGCAGT...........................................................................................................................................................................................1811.00100000100000000000
.........................................................................................................................ATTGTCCTGTCACAGCAGTATTG.......................................................................................................................................................................................2311.00100000100000000000
............................................................................................................................................................................................TTGTTGAGCGTCATTAGCAACA.....................................................................................................................2211.00100100000000000000
............................................................................................................................................................................................TTGTTGAGCGTCATTAGCG........................................................................................................................1911.00110000000000000000
....................................................................................................................................................................TACTGCTGGGTCGGGGCATT...............................................................................................................................................2011.00110000000000000000
........................................................................................................................TATTGTCCTGTCACAGCAC............................................................................................................................................................................................1911.00110000000000000000
..............................................................................................................................................................................................................AACGA--------G----------------------------CGGCGGACAG-GAAA--AC----------------------------------------CT--G--------A......2611.00100000000000100000
dm3
CTAA-------------A----AAGGATATATAC-------A-----------------TATATA---------------CCATGAAA-------------TCG-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGTTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------G----------------------------CGGCGGACAG-GAAA--AC----------------------------------------CT--G--------AGAAAAASizeHit CountTotal NormTotalGSM154618

Ovary		GSM154620

Ovary		GSM154621

Ovary		GSM154622

Ovary		GSM180328

Head		GSM180329

Mixed-body		GSM180330

Embryo		GSM180331

Embryo		GSM180332

Embryo		GSM180333

Embryo		GSM180334

Larvae		GSM180335

Disc		GSM180336

Pupae		GSM180337

S2		GSM239041

Head		GSM239050

Head		GSM239051

S2		GSM239052

S2		GSM246084

Head		GSM266765

S2		GSM280082

Ovary		GSM280083

Ovary		GSM280084

Ovary		GSM280085

Testis		GSM280086

Ovary		GSM280087

S2-NP		GSM280088

S2-NP		GSM312995

Head		GSM313160

Head		GSM313161

Head		GSM313162

Head		GSM313163

Head		GSM313164

Head		GSM313165

Head		GSM343287

Embryo		GSM379050

Ovary		GSM379051

Ovary		GSM379052

Ovary		GSM379053

Ovary		GSM379054

Ovary		GSM379055

Ovary		GSM379056

Ovary		GSM379057

Ovary		GSM379058

Ovary		GSM379059

Ovary		GSM379060

Ovary		GSM379061

Ovary		GSM379062

Ovary		GSM379063

Ovary		GSM379064

Ovary		GSM379065

Ovary		GSM379066

Ovary		GSM379067

Ovary		GSM424739

S2		GSM424740

S2		GSM424741

S2		GSM467729

Female-body		GSM467730

Female-body		GSM467731

Female-body		M002

CS		M003

Male-body		M004

Male-body		M005

ML-DmD32		M006

ML-DmD32		M029

OSC		M030

OSC		M031

OSC		M032

S2-R+		M033

S2-R+		M034

S2-R+		M035

S2-R+		M036

S2-R+		M037

S2-R+		M038

S2-R+		M039

S2-R+		M048

S2-R+		OSS2

OSS		OSS6

OSS		OSS7

OSS		OSS8

OSS		S1

Head		S10

Embryo		S11

Embryo		S12

Embryo		S13

Embryo		S14

Embryo		S15

S2-GMR		S16

Kc		S17

Larvae		S18

Larvae		S19

Pupae		S2

Head		S20

Pupae		S21

Disc		S22

Head		S23

Female-body		S24

Male-body		S25

Larvae		S26

Larvae		S27

Pupae		S28

Pupae		S29

Head		S3

Male-body		S30

S2-GMR		S31

S2		S32

S2		S33

Kc		S34

Kc		S35

Kc		S4

Female-body		S5

Disc		S6

Embryo		S7

Embryo		S8

S2		S9

Embryo		SRR001337

Head		SRR001338

Head		SRR001339

Head		SRR001340

Head		SRR001341

Head		SRR001342

Head		SRR001343

Head		SRR001344

Head		SRR001345

Head		SRR001346

Head		SRR001347

Head		SRR001348

Head		SRR001349

Head		SRR001664

Head		SRR010951

Ovary		SRR010952

Ovary		SRR010953

Ovary		SRR010954

Ovary		SRR010955

Ovary		SRR010956

Ovary		SRR010957

Ovary		SRR010958

Ovary		SRR010959

Ovary		SRR010960

Ovary		SRR014268

Embryo		SRR014269

Embryo		SRR014270

Embryo		SRR014271

Embryo		SRR014272

Embryo		SRR014273

Ovary		SRR014274

Ovary		SRR014275

Ovary		SRR014276

Ovary		SRR014277

Ovary		SRR014278

Ovary		SRR014279

Ovary		SRR014280

Ovary		SRR014281

Ovary		SRR014282

Ovary		SRR023197

S2		SRR023399

S2		SRR023400

S2		SRR023402

S2		SRR023407

S2		SRR029028

S2		SRR029029

S2		SRR029030

S2		SRR029031

S2		SRR029032

S2		SRR029033

S2		SRR029608

Head		SRR029633

Head		SRR030145

gb3		SRR031692

Head		SRR031693

Head		SRR031694

Head		SRR031696

Head		SRR031697

Head		SRR031698

Head		SRR031699

Head		SRR031700

Head		SRR031701

Head		SRR031702

Head		SRR031703

Head		SRR031704

Head		SRR032092

S2		SRR032093

S2		SRR032094

S2		SRR032095

S2-NP		SRR032096

S2-NP		SRR032152

Head		SRR060643

Testis		SRR060644

Ovary		SRR060645

Testis		SRR060646

Ovary		SRR060647

Ovary		SRR060648

Ovary		SRR060649

Ovary		SRR060650

Testis		SRR060651

Ovary		SRR060652

Testis		SRR060653

Ovary		SRR065151

Ovary		SRR065152

Ovary		SRR065153

Ovary		SRR065154

Ovary		SRR065155

Ovary		SRR065800

Ovary		SRR065801

Ovary		SRR065802

Ovary		SRR065803

Ovary		SRR065804

Ovary		SRR065805

Ovary		SRR065806

Ovary		SRR065807

Ovary		SRR097865

S2-NP		SRR097866

S2-NP		SRR097867

S2-NP		SRR298536

Ovary		SRR298537

Ovary		SRR298711

Ovary		SRR298712

Ovary		SRR317110

Ovary		SRR317111

Ovary		SRR317112

Ovary		SRR317113

Ovary		SRR317114

Ovary		SRR317115

Ovary		SRR317116

Ovary		SRR317117

Ovary		SRR341115

S2		SRR341116

S2		SRR341117

S2		SRR341118

S2		SRR351332

Mixed-body		SRR351333

Mixed-body		T004

OSC		T005

CME-L1		V001

Embryo		V002

Embryo		V003

S2		V006

Female-body		V007

Head		V008

S2		V009

CME-L1		V010

ML-DmD20-C5		V011

Sg4		V012

Male-body		V013

Head		V014

DTT		V015

DreRFHV		V018

Kc167		V019

GM2		V020

S2-R+		V021

ML-DmD21		V022

ML-DmD32		V023

Head		V024

Kc167		V025

S2-R+		V026

1182-2H		V027

ML-DmD21		V028

CME-W1-Cl.8+		V029

ML-DmD9		V030

ML-DmD8		V031

GM2		V032

S1		V033

CME-W1-Cl.8+		V034

ML-DmD16-C3		V035

ML-DmD32		V036

ML-DmD20-C5		V037

S2		V038

S2		V063

Ovary		V0632

Ovary		V064

Ovary		V0642

Ovary		V065

Ovary		V0652

Ovary		V066

Ovary		V0662

Ovary		V067

S2-NP		V073

mbn2		V074

S3		V075

ML-DmBG1-C1		V076

ML-DmBG3-C2		V077

Head		V078

Head		V079

Head		V080

Head		V081

Embryo		V082

Embryo		V083

Male-body		V084

Female-body		V085

CME-W2		V086

Female-body		V088

Ovary		V0882

Ovary		V089

Ovary		V0892

Ovary		V090

Male-body		V091

fGS/OSS		V092

Male-body		V093

Male-body		V094

S2-R+		V095

S2-R+		V096

Ovary		V097

Ovary		V098

Ovary		V125

ML-DmD9		V126

CME-L1		V127

G2		V128

S3		V129

ML-DmBG1-C1		V130

ML-DmBG3-C2		V131

ML-DmD16-C3		V132

ML-DmD32		V133

Sg4		V134

ML-DmD8		V135

CME-W2		V136

Male-body		V137

Head		V138

Male-body		V139

Female-body		V140

Female-body		V141

Female-body		V142

Female-body		V144

OSC		V145

S2		V146

S1		V147

1182-2H		V148

mbn2		GSM1528798

follicle cells
.......................................................................................................................ATATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................211490974.0049097400009330001543650635062100024003183310326653896236283100321112221080684500000432023000000000000000000001143908210031719164518482801126331096469611926701191173127228610342841178039971123465795957429168231854547519150000000000178493074382372503000004050781062413496076431053936567332297591111514203128131866805604311524730132617000240158000000240003002152633833627372817171428102014200027872387310687932311561434173815111950281052638906534212851826249692977130200697322206133741243683052180350455509858518274125165664432011452932135922911604132960134113211824082151674101639413411875077431756811833139812592751724110
.......................................................................................................................ATATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................221128301.001283010000301021728750601211016900100000576280144132854247645500100011017114322100003716220000000000000000000004531221528950456442771922639925810511817941367234122011801553675249685240317021491092313534626143775091254982739147300000000001910624211311041000000000000006791837605031142063827194929159535693109226736414315115701020114128610400040700000000000000000021187032495039242861465628984500142512350226679231068531007163170011438822032460161416101339172121310112861129589720842822525218101074701267127937961617528906100131002818687638833823225830
.......................................................................................................................ATATTGTCCTGTCACAGCAG............................................................................................................................................................................................20179086.0079086000016100010500120017400001010218381588138211112000000000000001000000543000000000000000000000503023004133638013165111900247071003145194737017914214120117883133862075380283314410000000000102000000000000000000000004244564702012127110219825719222766157212602208003004695303000020100000000000000000000143821121200214001810013412133101235712600302400013091000445010500010000000000020332203936457780761631827137120234101671620023526512001010004143027514303525113210
.......................................................................................................................ATATTGTCCTGTCACAGCA.............................................................................................................................................................................................19114360.00143600000000000000002010000000010212161871591100000000000000000000001230000000000000000000001000000200040120120000160000700010000121701473190084331144138520000000000000000000000000000000000002837740211535018218201164312349357000002151010000000000000000000000000010000000010000100073023721230047319703530000018020000100021000000002000000102651509995173602157030000380182900000300000000002308883425021000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAA.........................................................................................................................................................................................23112209.001220900001000001040000010000030000000000000000000000000000000000000000000000000000000081066001842830524483171071728110026713182222441502881439035191094546525600000000000030000000100000000000000010281620082731254941226679998522103000000864308000000700000001000000000110033232246000284002521011301001743106600000440000010000100100900110000001121277136242631411900010034028370000017000000000014650100000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTT..........................................................................................................................................................................................2219984.00998400001000000000100400000000000000000000000000000000000000000000000000000000000000800200011200800600000023000115120100004155422240353914354503949000000000010100000004000000000200000347628026020140259111955754151238120000057900300000000000000000000000001011220000110002100810291578000961920831000066200027010010000020000001000354954759611081153480101008807281000017720000000001394120102712000110
.......................................................................................................................ATATTGTCCTGTCACAGCAGG...........................................................................................................................................................................................2116173.00617300000000000000000000000000000000000000000000000010000000000000000000000000000000000000001000001000010300004010000000831706360263143200000000000000000000000000000000000012910808700848016050579981180000013500000000000000000000000000000000000000000000000670349100015170110000017100021000000000000000000000366714079922131814517061001125112894000002000000000012200001000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTATC........................................................................................................................................................................................2413787.003787000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000000000000000000000000000000000000000000000000000024121373000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGC...........................................................................................................................................................................................2112745.002745000000000001000001000000000000000000000000000000000000000000000000000000000000002000000000031040000003000130000000001361604090172810000000000000200000100000000000000000138162091002122016190243015000002020000000000000000000000000000000000000000000010011102272000162206000001000000200000000013000000000011842642152092544619031200177087820000060000000000210063223000000
......................................................................................................................................................................CTGCTGGGTCGGGGCATTAACA...........................................................................................................................................2212492.0024920000100368030000001000000000110000000000000000000000000000000000000000000000000001098270770115229522050300142917400014217221285556350138160501103086000000000001426000000000000000000000089920322024295151232054150000083000000000000000000000000000000010000014200000006158001000041203000001100004000000000000000000000007577406521022393010000001611000002001000000028344702000100
.......................................................................................................................ATATTGTCCTGTCACAGCAGA...........................................................................................................................................................................................2112423.0024230000300000020000000000000000000000000000000000000000000000000000000000000000000040000001000800400000022000100000000014110110729150540000000000000000000000000000000000006111204032133822111381332113100008800100000000000000000000000000000000000000207300210737200015730500000100000000000000000100000000001160248254165296201000061043530000060000000000227031331000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAT.........................................................................................................................................................................................2312176.00217600002000000000000000000000004212617401000000000000000000000017811000000000000000000000000000070004031003000353000016170300010404010237011010110000000000000000000000000000000000001622520931048203313741363205200000221000000000000000000000000000000000100000000037140043037000011140400000000000000000000000000000000007810170321000000003400000000000000000611000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGATC.........................................................................................................................................................................................2311658.00165800000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001159499000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTC..........................................................................................................................................................................................2211146.00114600000000000000000000000000000000000000000000000000000000000000000000000000000000000110000000021000001100002010000101217252080451615916575000000000000000000000000000000000000936204773612191301133000000330000000000000000000000000000000000000000000300041022110001512050000030000010000000000100030000000282331661125201000010084000002000000000024250021000000
........................................................................................................................TATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................201851.0085100002000000100100300000000001249470000000000000000000000000000000000000000000000003000000400040580000101010001231120100039130901531301831927000000000000000000000000000000000000458203000860463282224000002500000000000000000000000000000000010000000000000020020000240100000300000000000001000000000100002514102601010000006019000000000000000025641110000000
........................................................................................................................TATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................211754.00754000010000001002000000000000137244236000000000000000000000000000000000000000000000000000100014203302310100110000020360600000154010216661102101300000000000000000000000000000000000021640302015164624468152211600000270000000000000000000000000000000000000000000200014001000011010000000000020000000000000000000000241201000000001000000001000000000001510000000000
.........................................................................................................................ATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................191731.00731000000000000000000000000000006679211000000000000000000000000000000000000000000000000000000002000400000170000100000000000010000010110000000000000000000020000000000000009380361031076760242281000002600000000000000000000000000000000000000000000000750010000020000000100000000000000100000000000002018304506630000007041000000000000000002431001000000
.......................................................................................................................ATATTGTCCTGTCACAGC..............................................................................................................................................................................................181667.00667000000000000000101000000000165118859000000000000000000000000000000000000000000000010000000001001100000000000401000004065030021031501001100000000000000000000000000000000371056268128692963828000002400000000000000000000000000000000000000000000000200210000014000000000000010001000000000000000000212746731201000000000000000000000000000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAAA........................................................................................................................................................................................241599.0059900002000000300000000000000000000000000000000000000000000000000000000000000000000000000000000026010000130001800010000010101080170104200000000000000000000000000000000000064830360017360310500991100000380000000100000000000000000000000100000010000100010002000050020000020000000000000000100000000000310990011000000100200000000000000000000000000000
......................................................................................................................................................................CTGCTGGGTCGGGGCATTAAC............................................................................................................................................211455.004550000200011021000000000000002500000000000000000000000000001000000000000000000000012231400100020610000151900018650271022000002021201023000000000011190000000000000000000000059043244035321500000170000000000000000000000000000000100000010000000018140010000000000000400001000000000000000000000002514953740200000000040000000000000000102031020000000
.......................................................................................................................ATATTGTCCTGTCACAGCAT............................................................................................................................................................................................201454.004540000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000010000000001124710000000000000000000000000000000000000405901600320401318000000100000000000000000000000000000000000000000000000000033000041910000001000000000000000000000000000020211010500100000002021000000000000000002201100000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTG..........................................................................................................................................................................................221432.00432000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000010100000000100100001001013600034170403300000000000000000000000000000000000036570313371527355254840000035000000000000000000000000000000000000000000000003000100004703000001000000001000000000000000000027680000000000000100000000000000000600000000000
.........................................................................................................................ATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................201368.003680000000000001000000000000009300000000000000000000000000000100000000000000000000010003000000000000000000000500010000000000012010020000000000000000000000000000000000001527027119563265142632900000010000000000000000000000000000000000000000000000004100100001201000001000000000000000000000000000013140200000000000000000000000000000100000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAA............................................................................................................................................................................................201335.0033500000000010000000000000000000000000000000000000000000000000000000000000000000000200000000004000000000100002000000000141000200040560000000000000000000000000000000000001963016011717022026000000210000000000000000000000000000000010000000000040000013000041802000000000000000000000000000000000011683500000000001000000000000000000011400000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAG.........................................................................................................................................................................................231319.003190000100000000000010000000000000000000000000000000000000000000000000000000000000010000000001000100000010000000000000011000115010040000000000000000000000000000000000002947015011333144020123100000350000000000000000000000000000000000000000000000001011000013020000010000000000000000000000000000410120100000000000300000000000000000301100000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAC.........................................................................................................................................................................................231298.002980000100000000000000000000000000000000000000000000000000000000000000000000000000010001000000000001001000000530010000035201001218175000000000000000000000000000000000000195601410212114051120000001000000000000000000000000000000000000110000003114000000300003201000000000000000000000010000000000021080020000000100000000000000000000300000000000
........................................................................................................................TATTGTCCTGTCACAGCAG............................................................................................................................................................................................191224.00224000000000000001001000000000000151501000000000000000000000000000000000000000000000000001000000102400000000000301000004023200013207161000000000000000000000000000000000000014360110002212004000000002000000000000000000000000000000000000000000000000000000000200000000000001000000000000000000000011230000000000000000000000000000000000000000000
.............................................................................................................................................TTGTAACACTATAT--TATAGTTTA.................................................................................................................................................................231186.00186000000000000000000000000000115011310000000000000000000000000000000000000000000000000002000000000200000090000000000100021010045010110000000000000000000000000000000000002518080101701161188000000000000000000000000000000000000000000000000000004000000001000000000000000000000000000000000000000015700010000000000000100000000000100000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTCA.........................................................................................................................................................................................231180.001800000000001000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000100000000000000043200001301801125000000000000000000000000000000000000111801100220000000000002000000000000000000000000000000000000000000000000000400001201000000000000000000000000000000000036160000000000000000000000000000000300000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTTA.........................................................................................................................................................................................231170.00170000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100030000000001000000000000003000010005014000000000000000000000000000000000000153801400470401502110000013000000000000000000000000000000000000000000000000000010001000000001000000000000000000000000000011850000000000000000000000000000000100000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAC............................................................................................................................................................................................201152.00152000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000008000010001211011000000000000000000000000000000000000212107000400030200000070000000000000000000000000000000000000000000000000000000001010000000000000000000000000000000000343190000000000101000000000000000000900000000000
.......................................................................................................................ATATTGTCCTGTCACAGCC.............................................................................................................................................................................................191143.001430000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000100000000000000000000318120400000504800000000000000000000000000000000000086031000000302000000000000000000000000000000000000000000000000000000000027000001601000000000000000000000000000000000013191000000000001100000000000000000300000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGGT..........................................................................................................................................................................................221128.001280000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010010000000000000000000000000000000000006503000400028037000000500000000000000000000000000000000000000000000000000000000110100000000000000000000000000000000001013840000000000000000000000000000000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCATG...........................................................................................................................................................................................211124.001240000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000020520000000000000000000000000000000000001490200100000010000000000000000000000000000000000000000000000000000000000110001001000001000000000000000000000000000081682101073000000501300000000000000000000000000000
droEug1
CGGA-------------A----AAGGATATATAT-------A-----------------TATATG---------------CCACAAAA-------------TCG-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAATACTATATCTTATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------G----------------------------TGGCGGCAAG-GAAA--AC----------------------------------------CC--G--------AGGAAAASizeHit CountTotal NormTotal
No Reads
droBia1
TCCA-------------A----GA-GATAGATCC---CAGAA-----------------TACAT----------------CCATCGAA-------------TCG-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAC--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------GAGG-----------------CGG-----CGGCGGCAAG-GAAA--AC----------------------------------------CC--G--------AGGAAAASizeHit CountTotal NormTotal
No Reads
droTak1
CGAA-------------A--AAGAGGATATATAC-GCC---A-----------------TGTACA------------------CAAAA-------------TCG-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------GAGG-----------------CGG-----CGGCGGCAAG-GAAA--ACC---------------------------------------CC--G--------AGGAAAASizeHit CountTotal NormTotal
No Reads
droEle1
TTTA-------------T----ATATATATATAT-A-T---ATG---------------TATACA---------------CTACGAAA-------------TCG-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATATTTTATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------G---------------------------------------GAAA--AC----------------------------------------CC--G--------AGGAAAASizeHit CountTotal NormTotal
No Reads
droRho1
CGAA-------------A----AAGGATATAT--------------------------------G---------------TCACGAAA-------------TCG-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------G----------------------------AGGCGGCCAG-GAAA--AG----------------------------------------CC--G--------ACGAAAASizeHit CountTotal NormTotal
No Reads
droFic1
CCAA-------------A----TCGGATATAT--------------------------------T---------------CCATGGAA-------------TCG-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGAAA-ACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------CAGG-----------------CGG-----CGGCGGCAAG-GAAA--AG----------------------------------------CC--G--------AGGAAAASizeHit CountTotal NormTotal
No Reads
droKik1
CCAT-------------A-----AGGATATATC-----------------------------------------------GCG-CAAA-------------TCG-GACGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAACACTATAT--TATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------G----------------------------CAGCG------GAAA--ACT---------------------------------------CC--GAAACTCAAAGGAAAASizeHit CountTotal NormTotal
No Reads
droAna3
AAGAAAAACAGGACTATA----AAGGATATATGGTGTC---A-----------------TAT-----------------------------------------A-GACGCTTGCCGATGATATTGTCCTGTCACAGCAGTATTGTAATTCTATACTATATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------G----------------------------G-------AG-GAAA--AG----------------------------------------TC--A--------AGGAAAASizeHit CountTotal NormTotalM044

Female-body		M058

Embryo		V039

Embryo		V055

Head		V105

Male-body		V106

Head
.......................................................................................................................ATATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................21155950.0055950246296523115698240834186
.......................................................................................................................ATATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................22111821.0011821124519633851264666898
.......................................................................................................................ATATTGTCCTGTCACAGCAG............................................................................................................................................................................................2018774.00877412233681987525468
.......................................................................................................................ATATTGTCCTGTCACAGCAGTT..........................................................................................................................................................................................2215797.00579714321973584620
.......................................................................................................................ATATTGTCCTGTCACAGCA.............................................................................................................................................................................................1912164.0021641103147541571
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAA.........................................................................................................................................................................................2311244.0012448111132307902
.......................................................................................................................ATATTGTCCTGTCACAGCAGA...........................................................................................................................................................................................211791.0079120018838644
.......................................................................................................................ATATTGTCCTGTCACAGCAGC...........................................................................................................................................................................................211477.004773218113910106
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAT.........................................................................................................................................................................................231278.0027811070270134
.......................................................................................................................ATATTGTCCTGTCACAGCAGTGA.........................................................................................................................................................................................231234.00234120062214
........................................................................................................................TATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................201219.002191722014229
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAG.........................................................................................................................................................................................231171.001713600215109
.......................................................................................................................ATATTGTCCTGTCACAGCAT............................................................................................................................................................................................201146.00146800153120
.......................................................................................................................ATATTGTCCTGTCACAGCAGTTG.........................................................................................................................................................................................231142.00142250044271
........................................................................................................................TATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................211111.0011183612019
.......................................................................................................................ATATTGTCCTGTCACAGCAGG...........................................................................................................................................................................................211104.0010423167922
........................................................................................................................TATTGTCCTGTCACAGCAG............................................................................................................................................................................................19190.00908000505
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAAA........................................................................................................................................................................................24189.008986313059
.......................................................................................................................ATATTGTCCTGTCACAGCAGTGG.........................................................................................................................................................................................23184.00847008069
.......................................................................................................................ATATTGTCCTGTCACAGCAGTG..........................................................................................................................................................................................22183.0083140116151
.......................................................................................................................ATATTGTCCTGTCACAGCAGTTA.........................................................................................................................................................................................23177.007790020345
......................................................................................................................................................................CTGCTGGGTCGGGGCATTAACA...........................................................................................................................................22148.004862452110
.......................................................................................................................ATATTGTCCTGTCACAGC..............................................................................................................................................................................................18145.004563118017
.......................................................................................................................ATATTGTCCTGTCACAGCAGTC..........................................................................................................................................................................................22145.004527023112
.......................................................................................................................ATATTGTCCTGTCACAGCAGAT..........................................................................................................................................................................................22144.00440006137
.........................................................................................................................ATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................19144.004411104127
.......................................................................................................................ATATTGTCCTGTCACAGCAGTTGA........................................................................................................................................................................................24137.00373003031
.......................................................................................................................ATATTGTCCTGTCACAGCAA............................................................................................................................................................................................20134.003430016114
......................................................................................................................................................................CTGCTGGGTCGGGGCATTAAC............................................................................................................................................21133.00331224105
.......................................................................................................................ATATTGTCCTGTCACAGCAGTTAG........................................................................................................................................................................................24129.00294003121
.........................................................................................................................ATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................20128.00287130008
.......................................................................................................................ATATTGTCCTGTCACAGCAGCT..........................................................................................................................................................................................22123.00230007016
.......................................................................................................................ATATTGTCCTGTCACAGCAGTCG.........................................................................................................................................................................................23121.00211005114
.......................................................................................................................ATATTGTCCTGTCACAGCAGTTAA........................................................................................................................................................................................24121.00211002018
.......................................................................................................................ATATTGTCCTGTCACAGCT.............................................................................................................................................................................................19220.504130122015
.......................................................................................................................ATATTGTCCTGTCACAGCAGTCA.........................................................................................................................................................................................23116.0016200806
........................................................................................................................TATTGTCCTGTCACAGCAGTAT.........................................................................................................................................................................................22115.00151201002
.........................................................................................................................ATTGTCCTGTCACAGCAG............................................................................................................................................................................................18114.0014700007
.......................................................................................................................ATATTGTCCTGTCACAGCAC............................................................................................................................................................................................20114.0014020606
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAC.........................................................................................................................................................................................23113.0013430402
.......................................................................................................................ATATTGTCCTGTCACAGCAGTTGG........................................................................................................................................................................................24111.0011300008
.......................................................................................................................ATATTGTCCTGTCACAGCATG...........................................................................................................................................................................................21110.00100001000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAGA........................................................................................................................................................................................2419.009200106
........................................................................................................................TATTGTCCTGTCACAGCAGTAA.........................................................................................................................................................................................2219.009800001
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAAGT.......................................................................................................................................................................................2518.008100214
.......................................................................................................................ATATTGTCCTGTCACAGCAGAG..........................................................................................................................................................................................2218.008100403
.......................................................................................................................ATATTGTCCTGTCACAGCAGGT..........................................................................................................................................................................................2217.007000502
.......................................................................................................................ATATTGTCCTGTCACAGCAGTGAA........................................................................................................................................................................................2417.007200005
.........................................................................................................................ATTGTCCTGTCACAGCAGTT..........................................................................................................................................................................................2017.007100204
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAAG........................................................................................................................................................................................2417.007201112
.......................................................................................................................ATATTGTCCTGTCACAGCAGTGC.........................................................................................................................................................................................2316.006000105
.......................................................................................................................ATATTGTCCTGTCACAGCAGTTC.........................................................................................................................................................................................2316.006000402
..........................................................................................................................TTGTCCTGTCACAGCAGT...........................................................................................................................................................................................1816.006310101
.............................................................................................................................................TTGTAATTCTATACTATATAGCTTA.................................................................................................................................................................2516.006012003
.......................................................................................................................ATATTGTCCTGTCACAGCATA...........................................................................................................................................................................................2116.006000303
.......................................................................................................................ATATTGTCCTGTCACAGCC.............................................................................................................................................................................................1916.006000600
droBip1
ATGAAAAACTGGACTATA----AAGGATATAC-------------------------------------------------CGTCATA-------------T-A-GACGCTTGCCGATGATATTGTCCTGTCACAGCAGTATTGTAATTCTATACTATATAGCTTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGTCATTAGCAACGA--------G----------------------------G-------AG-GAAA--AG----------------------------------------TC--A--------AGGAAAASizeHit CountTotal NormTotal
No Reads
dp5
GCAT-------------A--TAGAAGATA----C-------A-----------------TATATATCGAATTAC-ATACGGCGTCGGATCGGAGCAGATGAGAG-GGCGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAAC--TTAAT--TATAGCCTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGCCATTGGCAACAA--------AGAGAAGGAGAAGCTACAAAGCTACAAAGCTAC-----G-GAAA-AAT----------------------------------------GC--T--------ACAGAAASizeHit CountTotal NormTotalM022

Male-body		M040

Female-body		M059

Embryo		M062

Head		V043

Embryo		V051

Head		V112

Male-body		SRR902010

Ovary		SRR902011

Testis		SRR902012

CNS imaginal disc
.......................................................................................................................ATATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................21124735.00247357198221736583205510327150600102
.......................................................................................................................ATATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................22124714.00247148160295153928820110938610280
.......................................................................................................................ATATTGTCCTGTCACAGCAG............................................................................................................................................................................................2012833.0028338104861583201029380046
.......................................................................................................................ATATTGTCCTGTCACAGCAGC...........................................................................................................................................................................................2111600.0016000346510875373000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTT..........................................................................................................................................................................................221850.008500123103256028739006
.......................................................................................................................ATATTGTCCTGTCACAGCA.............................................................................................................................................................................................191533.0053317017893682004
......................................................................................................................................................................CTGCTGGGTCGGGGCATTAACA...........................................................................................................................................221343.003430165169525400146
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAA.........................................................................................................................................................................................231276.002760501139511162007
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAT.........................................................................................................................................................................................231263.00263086371198110002
........................................................................................................................TATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................201196.001960139437582001
........................................................................................................................TATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................211173.00173011823181120001
......................................................................................................................................................................CTGCTGGGTCGGGGCATTAAC............................................................................................................................................211139.001390154325920045
.......................................................................................................................ATATTGTCCTGTCACAGCAGTC..........................................................................................................................................................................................221116.0011602344620131000
........................................................................................................................TATTGTCCTGTCACAGCAG............................................................................................................................................................................................191102.00102010001000001
.......................................................................................................................ATATTGTCCTGTCACAGC..............................................................................................................................................................................................18190.009017273000007
.......................................................................................................................ATATTGTCCTGTCACAGCAGG...........................................................................................................................................................................................21169.006901102114221000
.........................................................................................................................ATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................19158.0058023431000000
.........................................................................................................................ATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................20154.0054092516301000
.......................................................................................................................ATATTGTCCTGTCACAGCAGA...........................................................................................................................................................................................21145.0045043102241001
.......................................................................................................................ATATTGTCCTGTCACAGCAGTG..........................................................................................................................................................................................22135.003500522620000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAC.........................................................................................................................................................................................23119.00190277300000
.............................................................................................................................................TTGTAAC--TTAAT--TATAGCCTA.................................................................................................................................................................21119.00190071911000
........................................................................................................................TATTGTCCTGTCACAGCAGTAT.........................................................................................................................................................................................22115.00150820040001
..........................................................................................................................TTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................19113.00130533200000
.....................................................................................................................................................................ACTGCTGGGTCGGGGCATTAAC............................................................................................................................................22113.00130050230003
........................................................................................................................TATTGTCCTGTCACAGCAGTT..........................................................................................................................................................................................21111.00110801011000
.......................................................................................................................ATATTGTCCTGTCACAGCTT............................................................................................................................................................................................20210.00200509051000
.........................................................................................................................ATTGTCCTGTCACAGCAGC...........................................................................................................................................................................................1918.0080008000000
........................................................................................................................TATTGTCCTGTCACAGCA.............................................................................................................................................................................................1818.0080701000000
.......................................................................................................................ATATTGTCCTGTCACAGCG.............................................................................................................................................................................................1918.0080004040000
.......................................................................................................................ATATTGTCCTGTCACAGCAGCT..........................................................................................................................................................................................2218.0080000710000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAG.........................................................................................................................................................................................2318.0080501010001
.......................................................................................................................ATATTGTCCTGTCACAGCT.............................................................................................................................................................................................1927.50150505050000
.......................................................................................................................ATATTGTCCTGTCACAGCAA............................................................................................................................................................................................2017.0070101040001
.......................................................................................................................ATATTGTCCTGTCACAGCAT............................................................................................................................................................................................2017.0070004030000
.........................................................................................................................ATTGTCCTGTCACAGCAG............................................................................................................................................................................................1817.0070313000000
......................................................................................................................................................................CTGCTGGGTCGGGGCATTA..............................................................................................................................................1917.0070000340000
..........................................................................................................................TTGTCCTGTCACAGCAGT...........................................................................................................................................................................................1817.0070401101000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAAA........................................................................................................................................................................................2416.0060200031000
.........................................................................................................................ATTGTCCTGTCACAGCAGTATT........................................................................................................................................................................................2216.0060023010000
.......................................................................................................................ATATTGTCCTGTCACAGCAC............................................................................................................................................................................................2015.0050005000000
......................................................................................................................................................................CTGCTGGGTCGGGGCATTT..............................................................................................................................................1915.0050100031000
.......................................................................................................................ATATTGTCCTGTCACAGCAGGT..........................................................................................................................................................................................2215.0050001400000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTATT........................................................................................................................................................................................2415.0050112100000
.......................................................................................................................ATATTGTCCTGTCACAGCATA...........................................................................................................................................................................................2115.0050004010000
.......................................................................................................................ATATTGTCCTGTCACAGCATC...........................................................................................................................................................................................2115.0050012020000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTTG.........................................................................................................................................................................................2314.0040101010001
.......................................................................................................................ATATTGTCCTGTCACAGCAAC...........................................................................................................................................................................................2114.0040004000000
......................................................................................................................GATATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................2214.0040400000000
.......................................................................................................................ATATTGTCCTGTCACA................................................................................................................................................................................................1614.0040000000004
......................................................................................................................................................................CTGCTGGGTCGGGGCATTAA.............................................................................................................................................2013.0030010100001
droPer2
GCAT-------------A--TAGAAGATA----C-------A-----------------TATATATCGAATTAC-ATACGGCGTCGGATCGGAGCAGATGAGAG-GGCGCTTGCCATTGATATTGTCCTGTCACAGCAGTATTGTAAC--TTAAT--TATAGCCTACTGCTGGGTCGGGGCATTAACATTGTTGAGCGCCATTGGCAACAA--------AGAG-----------------CTACAAAGCTAC-----G-GAAA-AAT----------------------------------------GC--T--------ACAGAAASizeHit CountTotal NormTotalM021

Embryo		M042

Female-body		V042

Embryo		V050

Head		V057

Head		V111

Male-body
.......................................................................................................................ATATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................21154875.0054875745134201250240531835
.......................................................................................................................ATATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................2214888.00488826529811691050206937
.......................................................................................................................ATATTGTCCTGTCACAGCAG............................................................................................................................................................................................2014244.00424478188121162279212
.......................................................................................................................ATATTGTCCTGTCACAGCAGTT..........................................................................................................................................................................................2211699.0016990266304134320
.......................................................................................................................ATATTGTCCTGTCACAGCA.............................................................................................................................................................................................191914.0091401643475452
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAA.........................................................................................................................................................................................231452.00452019141472684
.......................................................................................................................ATATTGTCCTGTCACAGCAGC...........................................................................................................................................................................................211418.00418500643472
.......................................................................................................................ATATTGTCCTGTCACAGCAGG...........................................................................................................................................................................................211227.002271201281860
.......................................................................................................................ATATTGTCCTGTCACAGCAGA...........................................................................................................................................................................................211157.00157010391161
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAT.........................................................................................................................................................................................231120.00120026225670
.......................................................................................................................ATATTGTCCTGTCACAGCAGTC..........................................................................................................................................................................................22193.009301415730
........................................................................................................................TATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................20161.006103406210
......................................................................................................................................................................CTGCTGGGTCGGGGCATTAACA...........................................................................................................................................22155.0055120152611
.......................................................................................................................ATATTGTCCTGTCACAGCAT............................................................................................................................................................................................20132.00320005270
........................................................................................................................TATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................21128.00280211240
.......................................................................................................................ATATTGTCCTGTCACAGCAC............................................................................................................................................................................................20121.00211008120
........................................................................................................................TATTGTCCTGTCACAGCAG............................................................................................................................................................................................19119.00190170020
.......................................................................................................................ATATTGTCCTGTCACAGC..............................................................................................................................................................................................18119.00191402120
.......................................................................................................................ATATTGTCCTGTCACAGCATG...........................................................................................................................................................................................21117.00170002150
.......................................................................................................................ATATTGTCCTGTCACAGCAGTTA.........................................................................................................................................................................................23116.00160302110
.........................................................................................................................ATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................19113.0013000580
.......................................................................................................................ATATTGTCCTGTCACAGCATC...........................................................................................................................................................................................21113.00130003100
.......................................................................................................................ATATTGTCCTGTCACAGCAGTG..........................................................................................................................................................................................22113.0013011380
.......................................................................................................................ATATTGTCCTGTCACAGCAA............................................................................................................................................................................................20112.0012010290
.......................................................................................................................ATATTGTCCTGTCACAGCT.............................................................................................................................................................................................19212.00240002220
......................................................................................................................................................................CTGCTGGGTCGGGGCATT...............................................................................................................................................18110.0010410050
.......................................................................................................................ATATTGTCCTGTCACAGCAGCT..........................................................................................................................................................................................22110.0010000280
......................................................................................................................................................................CTGCTGGGTCGGGGCATTAAC............................................................................................................................................2119.009503100
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAAA........................................................................................................................................................................................2419.009000270
.......................................................................................................................ATATTGTCCTGTCACAGCAGTCA.........................................................................................................................................................................................2319.009000270
.......................................................................................................................ATATTGTCCTGTCACAGCAGGT..........................................................................................................................................................................................2218.008000170
........................................................................................................................TATTGTCCTGTCACAGCAGTT..........................................................................................................................................................................................2118.008030230
.........................................................................................................................ATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................2017.007041020
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAC.........................................................................................................................................................................................2317.007010240
......................................................................................................................................................................CTGCTGGGTCGGGGCATTT..............................................................................................................................................1917.007000160
.....................................................................................................................................................................ACTGCTGGGTCGGGGCATTAAC............................................................................................................................................2216.006101220
........................................................................................................................TATTGTCCTGTCACAGCAGTAT.........................................................................................................................................................................................2216.006050010
.......................................................................................................................ATATTGTCCTGTCACAGCTT............................................................................................................................................................................................2036.00180005130
..........................................................................................................................TTGTCCTGTCACAGCAGT...........................................................................................................................................................................................1816.006010230
.......................................................................................................................ATATTGTCCTGTCACAGCAGCC..........................................................................................................................................................................................2216.006000060
droWil2
CTGC-------------T----------AT--CC-------A-----------------TCTA-------------------AC--AA-------------AAG-AGAGCTTGCCAGTGATATTGTCCTGTCACAGCAGTATAGTAACA-TAT-T--CATTTCGTACTGCTGAGCCGGGGCATTAACATTGTTGAGCGTCTGTGGCAACGA--------G----------------------------CGGA---------AA--ACTCTACTTCTGATGATGATAATAATGATTCAAGTCAAAAGGGAACG-------AAAAAAAASizeHit CountTotal NormTotalM020

Head		M045

Female-body		V117

Male-body		V118

Embryo		V119

Head
.......................................................................................................................ATATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................21193112.00931124343114816611791868042
.......................................................................................................................ATATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................22154414.00544143931886433599213562
.......................................................................................................................ATATTGTCCTGTCACAGCAG............................................................................................................................................................................................20118088.00180889449567413607671
.......................................................................................................................ATATTGTCCTGTCACAGCA.............................................................................................................................................................................................1914262.004262247514383922
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAA.........................................................................................................................................................................................2311526.00152622293700772
.......................................................................................................................ATATTGTCCTGTCACAGCAGTT..........................................................................................................................................................................................2211162.00116235157361069
.............................................................................................................................................TAGTAACA-TAT-T--CATTTCGTA.................................................................................................................................................................211626.006261411041272
.......................................................................................................................ATATTGTCCTGTCACAGCAGC...........................................................................................................................................................................................211486.004863101335137
......................................................................................................................................................................CTGCTGAGCCGGGGCATTAACA...........................................................................................................................................221414.00414778129830
.......................................................................................................................ATATTGTCCTGTCACAGCAGG...........................................................................................................................................................................................211399.0039936002631
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAT.........................................................................................................................................................................................231318.003183559163160
.......................................................................................................................ATATTGTCCTGTCACAGCAGA...........................................................................................................................................................................................211272.002723025262
.......................................................................................................................ATATTGTCCTGTCACAGC..............................................................................................................................................................................................181225.0022520300616
........................................................................................................................TATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................201178.001785763589
........................................................................................................................TATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................211175.0017536614362
.......................................................................................................................ATATTGTCCTGTCACAGCAC............................................................................................................................................................................................201152.001521440008
.........................................................................................................................ATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................19194.00940731074
........................................................................................................................TATTGTCCTGTCACAGCAG............................................................................................................................................................................................19168.006810460012
.........................................................................................................................ATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................20165.00650303428
............................................................................................................................................................................................TTGTTGAGCGTCTGTGGCAACGA--------G----------------------------...............................................................................24158.0058520015
......................................................................................................................................................................CTGCTGAGCCGGGGCATTAAC............................................................................................................................................21152.00521040335
.......................................................................................................................ATATTGTCCTGTCACAGCAGTC..........................................................................................................................................................................................22137.00372101816
.......................................................................................................................ATATTGTCCTGTCACAGCAGTG..........................................................................................................................................................................................22135.00351000178
.......................................................................................................................ATATTGTCCTGTCACAGCAA............................................................................................................................................................................................20130.0030410025
............................................................................................................................................................................................TTGTTGAGCGTCTGTGGCAACGA--------G----------------------------C..............................................................................25129.0029221042
..............................................................A-------------------AC--AA-------------AAG-AGAGCTTGCCAGTG................................................................................................................................................................................................................22125.00250011212
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAG.........................................................................................................................................................................................23125.0025430414
............................................................................................................................................................................................TTGTTGAGCGTCTGTGGCAACGA--------G----------------------------A..............................................................................25122.0022220000
.....................................................................................................................................................................ACTGCTGAGCCGGGGCATTAAC............................................................................................................................................22121.0021141042
............................................................................................................................................................................................TTGTTGAGCGTCTGTGGCAACGA--------............................................................................................................23120.0020200000
.......................................................................................................................ATATTGTCCTGTCACAGCT.............................................................................................................................................................................................19116.001670009
.........................................................................................................................ATTGTCCTGTCACAGCAG............................................................................................................................................................................................18115.001524009
........................................................................................................................TATTGTCCTGTCACAGCAGTAT.........................................................................................................................................................................................22115.001514055
..................................................................................AC--AA-------------AAG-AGAGCTTGCCAGTG................................................................................................................................................................................................................21114.0014000212
.......................................................................................................................ATATTGTCCTGTCACAGCAT............................................................................................................................................................................................20113.0013100111
......................................................................................................................................................................CTGCTGAGCCGGGGCATT...............................................................................................................................................18113.0013130000
............................................................................................................................................................................................TTGTTGAGCGTCTGTGGCAACGA--------G----------------------------CGG............................................................................27113.001350080
.......................................................................................................................ATATTGTCCTGTCACAGCG.............................................................................................................................................................................................19112.001280004
..........................................................................................................................TTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................19110.001011026
.......................................................................................A-------------AAG-AGAGCTTGCCAGTG................................................................................................................................................................................................................1819.00900036
..................................................................................................................................................................CGTACTGCTGAGCCGGGGCATT...............................................................................................................................................2219.00980010
.......................................................................................................................ATATTGTCCTGTCACAGCC.............................................................................................................................................................................................1919.00930006
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAC.........................................................................................................................................................................................2318.00830005
................................................................................................................................................TAACA-TAT-T--CATTTCGTA.................................................................................................................................................................1818.00850030
.......................................................................................................................ATATTGTCCTGTCACAGCATA...........................................................................................................................................................................................2117.00700061
......................................................................................................................................................................CTGCTGAGCCGGGGCATTAA.............................................................................................................................................2017.00700070
............................................................................................................................................................................................TTGTTGAGCGTCTGTGGCAAC......................................................................................................................2117.00770000
........................................................................................................................TATTGTCCTGTCACAGCAGTT..........................................................................................................................................................................................2117.00700007
.........................................................................................................................ATTGTCCTGTCACAGCAGTATA........................................................................................................................................................................................2216.00600033
.........................................................................................................................ATTGTCCTGTCACAGCAGTAT.........................................................................................................................................................................................2116.00601014
.......................................................................................................................ATATTGTCCTGTCACAGT..............................................................................................................................................................................................1816.00600024
........................................................................................................................TATTGTCCTGTCACAGCA.............................................................................................................................................................................................1816.00605001
............................................................................................................................................................................................TTGTTGAGCGTCTGTGGCAACGA--------G----------------------------AA.............................................................................2615.00550000
........................................................................................................................TATTGTCCTGTCACAGCAGTAA.........................................................................................................................................................................................2215.00503002
............................................................................................................................................................................................TTGTTGAGCGTCTGTGGCAACGA--------G----------------------------CGGA---------..................................................................2815.00550000
..............................................................................................................................................AGTAACA-TAT-T--CATTTCGTA.................................................................................................................................................................2015.00501040
......................................................................................................................................................................CTGCTGAGCCGGGGCATTA..............................................................................................................................................1915.00530011
...................................................................................C--AA-------------AAG-AGAGCTTGCCAGTG................................................................................................................................................................................................................2015.00500005
.......................................................................................................................ATATTGTCCTGTCACAGCAGTGA.........................................................................................................................................................................................2315.00511003
..............................................................................................................................................................ATTTCGTACTGCTGAGCCGGGGCATT...............................................................................................................................................2615.00550000
.........................................................................................................................ATTGTCCTGTCACAGCAGTAA.........................................................................................................................................................................................2114.00401021
..................................................................................................................................................................CGTACTGCTGAGCCGGGGCATTAAC............................................................................................................................................2514.00440000
................................................................................................................................................TAACA-TAT-T--CATTTCGTACTGCTGAGCC.......................................................................................................................................................2814.00440000
..........................................................................................................................TTGTCCTGTCACAGCAGT...........................................................................................................................................................................................1814.00411002
.......................................................................................................................................................................TGCTGAGCCGGGGCATTAACA...........................................................................................................................................2114.00412010
....................................................................................................................................................................TACTGCTGAGCCGGGGCATT...............................................................................................................................................2014.00440000
............................................................................................................................................................................................TTGTTGAGCGTCTGTGGCAACGA--------G----------------------------AAA............................................................................2713.00330000
...................................................................................................................................................................GTACTGCTGAGCCGGGGCATTA..............................................................................................................................................2213.00320010
............................................................................................................................................................................................TTGTTGAGCGTCTGTGGCAACGA--------G----------------------------CAA............................................................................2713.00330000
.............................................................................................................................................TAGTAACA-TAT-T--CATTTCGT..................................................................................................................................................................2013.00330000
............................................................................................................................................................................................TTGTTGAGCGTCTGTGGCAACGA--------G----------------------------G..............................................................................2513.00330000
droVir3
ATAA-------------A----CTGCATATATTT---G---ATATATACAGGCGGCATATATGTGTCTGATTGTGATATATCGTC-GA-------------TCGTTGCGCTTGCCAGTGATATTGTCCTGTCACAGCAGTATTGTAC-GTTAAGC--AATTG-GTACTGCTGAGCCGGGGCATTAACATTGTTGAGCGTCGTTAGCAACCA--------A-----------------------------------------AA--A-----------------------------------------GCCAG-------AAAAGCCASizeHit CountTotal NormTotalM027

Male-body		M028

Head		M047

Female-body		M061

Embryo		SRR060654

Ovary		SRR060655

Testis		SRR060656

Ovary		SRR060657

Testis		SRR060658

Ovary		SRR060659

Testis		SRR060660

Ovary		SRR060661

Embryo		SRR060662

Embryo		SRR060663

Embryo		SRR060664

Male-body		SRR060665

Female-body		SRR060666

Male-body		SRR060667

Female-body		SRR060668

Male-body		SRR060669

Female-body		SRR060670

Testis		SRR060671

Male-body		SRR060672

Female-body		SRR060673

Ovary		SRR060674

Ovary		SRR060675

Ovary		SRR060676

Ovary		SRR060677

Ovary		SRR060678

Testis		SRR060679

Testis		SRR060680

Testis		SRR060681

Testis		SRR060682

Embryo		SRR060683

Testis		SRR060684

Embryo		SRR060685

Embryo		SRR060686

Embryo		SRR060687

Embryo		SRR060688

Ovary		SRR060689

Testis		SRR1106712

embryo_0-2h		SRR1106713

embryo_0-2h		SRR1106714

embryo_2-4h		SRR1106715

embryo_4-6h		SRR1106716

embryo_4-6h		SRR1106717

embryo_6-8h		SRR1106718

embryo_6-8h		SRR1106719

embryo_8-10h		SRR1106720

embryo_8-10h		SRR1106721

embryo_10-12h		SRR1106722

embryo_10-12h		SRR1106723

embryo_12-14h		SRR1106724

embryo_12-14h		SRR1106725

embryo_14-16h		SRR1106726

embryo_14-16h		SRR1106727

larvae		SRR1106728

larvae		SRR1106729

mixed whole adult body		SRR1106730

embryo_16-30h		V047

Embryo		V053

Head		V116

Male-body		GSM1528803

follicle cells		SRR2096013

Ovary_Strain_9_oxidized		SRR2096014

Ovary_Strain_160_oxidized		SRR2096026

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096038

embryo_0-2h from 14 day old Strain 9 mothers		SRR2096050

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096055

Ovary_Min_43		SRR2096056

Ovary_Min_46		SRR2096057

Ovary_Min_50		SRR2096058

Ovary_Min_98		SRR2096059

Ovary_Min_164		SRR2096060

Ovary_Min_193		SRR2096061

embryo_0-2h from 14 day old Strain 160 mothers		SRR2096072

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096079

embryo_0-2h from 15to16 day old dysgenic mothers		SRR2096080

embryo_0-2h from 15to16 day old nondysgenic mothers		SRR2096081

embryo_0-2h from 15to16 day old nondysgenic mothers
.......................................................................................................................ATATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................21141284.00412848876711161205030011200045712689115427843496132972646327950234232111811210192131100001017413710124620142885134301394002031274176001202
.......................................................................................................................ATATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................22115885.00158858544254629120200000000189396458413498994371860148603203137514000008001400060685680161811691351465749652112858012003130323510000
.......................................................................................................................ATATTGTCCTGTCACAGCAG............................................................................................................................................................................................2018105.008105305269595039000000000021919461108185671113350010001313011000000000000023052320171372547630001004138233000100
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAA.........................................................................................................................................................................................2311810.00181002371001000000004271819628412888012525400110310300201200000000000000000001012144303000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTT..........................................................................................................................................................................................2211688.0016884979600000000001621157714117067011820711000300000000000000000000000000000284843300000001000000000
.......................................................................................................................ATATTGTCCTGTCACAGCA.............................................................................................................................................................................................1911001.00100141114510000000000503718204121043360000010000000000000000000000000000012563300000004000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAT.........................................................................................................................................................................................231749.0074902461900000000001467735934842076132000002020000000000000000000000000003422000000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGC...........................................................................................................................................................................................211498.00498783220400000000003522410220000000000000000000000000000000000005168800000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGG...........................................................................................................................................................................................211170.0017013103260000000000040031002000000000000000000000000000000100000332000000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGC..............................................................................................................................................................................................181141.00141974420000000000433241038000000000000000000000000000000000122017000000002000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGA...........................................................................................................................................................................................211141.00141011200000000000781631030000000000000000000000000000000000000092700000000000000000
........................................................................................................................TATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................201111.00111008120000000000341310003000000000000000000000000000000000000012100000000000000000
......................................................................................................................................................................CTGCTGAGCCGGGGCATTAACA...........................................................................................................................................22198.0098054150000000000621571043000000000000010000000000141322000009812000000000000001100
.......................................................................................................................ATATTGTCCTGTCACAGCAGTC..........................................................................................................................................................................................22188.00880101300000000001223863022000000000000000000000000000001000002725100000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAC............................................................................................................................................................................................20187.0087563000000000000000000001000000000000000000000000000000000000018000000000000000000
........................................................................................................................TATTGTCCTGTCACAGCAG............................................................................................................................................................................................19179.007907710000000000001000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................TTGTAC-GTTAAGC--AATTG-GTA.................................................................................................................................................................21171.00710002600000000001111010020000000000000000000000000412110010011160000000100000000000
............................................................................................................................................................................................TTGTTGAGCGTCGTTAGCAACC.....................................................................................................................22167.006705900000000000000010000100000000000000000000000000010000001200000010000000010000
........................................................................................................................TATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................21160.006000404000000000050210001300000000000000000000000000000000000103000000000000000000
............................................................................................................................................................................................TTGTTGAGCGTCGTTAGCAAC......................................................................................................................21153.005314000000000000040001102200000000000000000000000000000000000001000000000000010000
.........................................................................................................................ATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................19147.004700160000000000043052103300000000000000000000000000000000000008200000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAAA........................................................................................................................................................................................24146.0046001000000000001630111103400000000000001000000000000000000000004001000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAG.........................................................................................................................................................................................23139.00390020000000000055270303900000000000000000000000000000000000003000000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTG..........................................................................................................................................................................................22135.00352652000000000030112000300000000000000000000000000000000000037000000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAA............................................................................................................................................................................................20131.003101100000000000112203051000000000000000000000000000000000000014000000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTTA.........................................................................................................................................................................................23129.00290020000000000052364000400000000000000000000000000000000000003000000000000000000
.........................................................................................................................ATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................20121.00210029000001000022020001100000000000000000000000000000000000001000000000000000000
......................................................................................................................................................................CTGCTGAGCCGGGGCATTAAC............................................................................................................................................21116.00160102000000000010001100000000000000000000000000001001101000312000000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAT............................................................................................................................................................................................20116.001601100000000000100000001000000000000000000000000000000000000010200000000000000000
..................................................................................GTC-GA-------------TCGTTGCGCTTGCCAGTG................................................................................................................................................................................................................23113.00130700000000000020000000000000000000000000000000000000000000111100000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAC.........................................................................................................................................................................................23112.00120013000000000020000101000000100000000000000000000000000000111000000000000000000
..........................................................................................................................TTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................19112.00120050000000000010030100000000000000000000000000000000000000002000000000000000000
.........................................................................................................................ATTGTCCTGTCACAGCAG............................................................................................................................................................................................18112.001210100000000000000000000100000000000000000000000000000000000000000000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCACC...........................................................................................................................................................................................21111.001100000000000000000000000000000000000000000000000000000000000011000000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCT.............................................................................................................................................................................................19111.00112310000000000000000000000000000000000000000000000000000000005000000000000000000
........................................................................................................................TATTGTCCTGTCACAGCAGTAT.........................................................................................................................................................................................22110.00100050000000000001020000100000000000000100000000000000000000000000000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGCT..........................................................................................................................................................................................22110.00100000000000000000000000200000000000000000000000000000000000008000000000000000000
.........................................................................................................................ATTGTCCTGTCACAGCAGTAT.........................................................................................................................................................................................2119.0090010000000000001002200200000000000000000000000000000000000001000000000000000000
.............................................................................................................................................TTGTAC-GTTAAGC--AATTG-GT..................................................................................................................................................................2019.0090010000000000000001000000000000000000000000000000000000000106000000000000000000
.....................................................................................................................................................................ACTGCTGAGCCGGGGCATTAAC............................................................................................................................................2219.0090113000000000011000100000000000000000000000000000000000000001000000000000000000
........................................................................................................................TATTGTCCTGTCACAGCAGTT..........................................................................................................................................................................................2118.0080060000000000000000000000000000000000000000000000000000000001100000000000000000
.......................................................................................A-------------TCGTTGCGCTTGCCAGTG................................................................................................................................................................................................................1918.0080010000000000000010000000000011200000000000000000000000000002000000000000000000
..........................................................................................................................TTGTCCTGTCACAGCAGT...........................................................................................................................................................................................1818.0080030000000000012110000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................TTGTTGAGCGTCGTTAGCAACCA--------............................................................................................................2317.0070101000000000001001003000000000000000000000000000000000000000000000000000000000
........................................................................................................................TATTGTCCTGTCACAGCA.............................................................................................................................................................................................1816.0060060000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCC.............................................................................................................................................................................................1916.0060100000000000000010001000000000000000000000000000000000000003000000000000000000
....................................................................................................................................................................TACTGCTGAGCCGGGGCATT...............................................................................................................................................2016.0061000000000000010001000100000000000000000000000000000000000001100000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCATC...........................................................................................................................................................................................2115.0050000000000000000000000000000000000000000000000000000000000005000000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTTG.........................................................................................................................................................................................2315.0050000000000000000100000100000000000000000000000000000000000002100000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTATT........................................................................................................................................................................................2415.0050000000000000010111100000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................TACTGCTGAGCCGGGGCATTAAC............................................................................................................................................2314.0040100000000000000001001000000000000000000000000000000000000100000000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCG.............................................................................................................................................................................................1914.0041100000000000000000000000000000000000000000000000000000000011000000000000000000
......................................................................................................................................................................CTGCTGAGCCGGGGCATTT..............................................................................................................................................1914.0040000000000000010000000000000000000000000000000000000000000003000000000000000000
......................................................................................................................................................................CTGCTGAGCCGGGGCATT...............................................................................................................................................1814.0040211000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................TC-GA-------------TCGTTGCGCTTGCCAGTG................................................................................................................................................................................................................2214.0040000000000000000001000000000000000000000000000000000000000003000000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCAGTCA.........................................................................................................................................................................................2314.0040000000000000000000100100000000000000000000000000000000000002000000000000000000
...........................................................................................................................TGTCCTGTCACAGCAGTA..........................................................................................................................................................................................1814.0040000000000000000000101100000000000000000000000000000000000010000000000000000000
............................................................................................................................................................................................TTGTTGAGCGTCGTTAGC.........................................................................................................................1814.0040200000000000000001000000000000000000000000000000000000000100000000000000000000
.......................................................................................................................ATATTGTCCTGTCACAGCATA...........................................................................................................................................................................................2113.0030000000000000010000000000000000000000000000000000000000000002000000000000000000
droMoj3
CTGA-------------TTGGATTGGATAT--CC-------A-----------------TCTAT-------------------C--AATCAACGCGTCTATTAT-AGCGCTTGCCAGTGATATTGTCCTGTCACAGCAGTATTGTAAA-TTAAGC--AATTG-GTACTGCTGAGCCGGGGCATTAACATTGTTGAGCGTCGTTAGCAACCA--------G----------------------------------------------------------------------------------------------------AAGAAATSizeHit CountTotal NormTotalM046

Female-body		V041

Embryo		V049

Head		V056

Head		M060

Embryo		V110

Male-body
.......................................................................................................................ATATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................221159680.001596801570745713711732147406144
.......................................................................................................................ATATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................21174825.0074825264514301924326365216523490
.......................................................................................................................ATATTGTCCTGTCACAGCAG............................................................................................................................................................................................2018361.00836112251930123479523103
.......................................................................................................................ATATTGTCCTGTCACAGCAGC...........................................................................................................................................................................................2114145.004145264715139372
.......................................................................................................................ATATTGTCCTGTCACAGCAGTT..........................................................................................................................................................................................2213541.0035412444812171746163123
.......................................................................................................................ATATTGTCCTGTCACAGCA.............................................................................................................................................................................................1911337.0013375745207311510
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAA.........................................................................................................................................................................................231759.00759755916024021114
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAT.........................................................................................................................................................................................231741.007411531056714492
.........................................................................................................................ATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................201723.0072362007150
.......................................................................................................................ATATTGTCCTGTCACAGCAGTC..........................................................................................................................................................................................221702.0070212139376040
......................................................................................................................................................................CTGCTGAGCCGGGGCATTAACA...........................................................................................................................................221637.0063749913175022
........................................................................................................................TATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................211619.00619993335110
........................................................................................................................TATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................201279.002791931411682
.......................................................................................................................ATATTGTCCTGTCACAGCAGG...........................................................................................................................................................................................211238.00238407780752
.............................................................................................................................................TTGTAAA-TTAAGC--AATTG-GTA.................................................................................................................................................................211206.00206015001910
......................................................................................................................................................................CTGCTGAGCCGGGGCATTAAC............................................................................................................................................211189.0018927141741
.......................................................................................................................ATATTGTCCTGTCACAGCAGA...........................................................................................................................................................................................211139.0013963457771
.........................................................................................................................ATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................191116.0011617053847
.......................................................................................................................ATATTGTCCTGTCACAGCAGTG..........................................................................................................................................................................................221106.001065937820
........................................................................................................................TATTGTCCTGTCACAGCAG............................................................................................................................................................................................191104.0010410300100
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAC.........................................................................................................................................................................................23188.00884038730
..........................................................................................................................TTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................19172.00722110680
.......................................................................................................................ATATTGTCCTGTCACAGCAT............................................................................................................................................................................................20145.004530212010
.......................................................................................................................ATATTGTCCTGTCACAGC..............................................................................................................................................................................................18143.0043401112160
.......................................................................................................................ATATTGTCCTGTCACAGCAGGC..........................................................................................................................................................................................22138.00380110360
.......................................................................................................................ATATTGTCCTGTCACAGCAGCT..........................................................................................................................................................................................22128.00280871120
........................................................................................................................TATTGTCCTGTCACAGCAGTT..........................................................................................................................................................................................21125.00252300200
.......................................................................................................................ATATTGTCCTGTCACAGCAC............................................................................................................................................................................................20124.00240019140
.......................................................................................................................ATATTGTCCTGTCACAGCAGTTG.........................................................................................................................................................................................23124.00244051311
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAG.........................................................................................................................................................................................23123.0023812750
.......................................................................................................................ATATTGTCCTGTCACAGCAGTTA.........................................................................................................................................................................................23122.0022517810
.......................................................................................................................ATATTGTCCTGTCACAGCATA...........................................................................................................................................................................................21119.00190031150
.....................................................................................................................................................................ACTGCTGAGCCGGGGCATTAAC............................................................................................................................................22119.00191100161
...........................................................................................................................TGTCCTGTCACAGCAGTA..........................................................................................................................................................................................18118.00180100170
.......................................................................................................................ATATTGTCCTGTCACAGCAA............................................................................................................................................................................................20118.00183031011
.........................................................................................................................ATTGTCCTGTCACAGCAG............................................................................................................................................................................................18118.00181201230
..........................................................................................................................TTGTCCTGTCACAGCAGT...........................................................................................................................................................................................18118.00186001110
........................................................................................................................TATTGTCCTGTCACAGCAGTAA.........................................................................................................................................................................................22117.00171500020
........................................................................................................................TATTGTCCTGTCACAGCAGC...........................................................................................................................................................................................20117.00171000160
.......................................................................................................................ATATTGTCCTGTCACAGCT.............................................................................................................................................................................................19117.00170021500
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAAA........................................................................................................................................................................................24115.0015417210
.......................................................................................................................ATATTGTCCTGTCACAGCAGTATT........................................................................................................................................................................................24115.0015400650
.......................................................................................................................ATATTGTCCTGTCACAGCAGGT..........................................................................................................................................................................................22115.0015018510
......................................................................................................................................................................CTGCTGAGCCGGGGCATTAA.............................................................................................................................................20113.0013032080
......................................................................................................................................................................CTGCTGAGCCGGGGCATTAACAA..........................................................................................................................................23112.00120100110
.......................................................................................................................ATATTGTCCTGTCACAGCTA............................................................................................................................................................................................20112.00120000120
droGri2
G------------------------GATATATAT-------A-----------------TATATA------------------TTTAA-------------TCGTTGCGCTTGCCAGTGATATTGTCCTGTCACAGCAGTATTGTTAA-TTAAGC--AATTG-GTACTGCTGAGCCGGGGCATTAACATTGTTGAGCGTTGCTAGCAACTAAAAAGCGAG----------------------------CAGCGAGCAGCGAGA--AG----------------------------------------CA--G--------AG---AASizeHit CountTotal NormTotalM041

Female-body		V109

Male-body
.......................................................................................................................ATATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................211731.00731371360
.......................................................................................................................ATATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................221240.0024022911
.......................................................................................................................ATATTGTCCTGTCACAGCAG............................................................................................................................................................................................20190.0090864
........................................................................................................................TATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................20126.0026260
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAT.........................................................................................................................................................................................23124.0024240
........................................................................................................................TATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................21118.0018180
.......................................................................................................................ATATTGTCCTGTCACAGCAGTT..........................................................................................................................................................................................22116.0016151
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAA.........................................................................................................................................................................................23112.0012102
........................................................................................................................TATTGTCCTGTCACAGCAG............................................................................................................................................................................................19110.0010100
.......................................................................................................................ATATTGTCCTGTCACAGCA.............................................................................................................................................................................................1917.00770
..........................................................................................................................TTGTCCTGTCACAGCAGT...........................................................................................................................................................................................1813.00330
..........................................................................................................................TTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................1913.00330
......................................................................................................................................................................CTGCTGAGCCGGGGCATTAACA...........................................................................................................................................2212.00211
.........................................................................................................................ATTGTCCTGTCACAGCAGT...........................................................................................................................................................................................1912.00220
........................................................................................................................TATTGTCCTGTCACAGCAGTAA.........................................................................................................................................................................................2212.00220
.......................................................................................................................ATATTGTCCTGTCACAGC..............................................................................................................................................................................................1812.00220
.....................................................................................TAA-------------TCGTTGCGCTTGCCAGTG................................................................................................................................................................................................................2111.00110
........................................................................................................................TATTGTCCTGTCACAGCAGTAAA........................................................................................................................................................................................2311.00110
........................................................................................................................TATTGTCCTGTCACAGCAGTT..........................................................................................................................................................................................2111.00110
........................................................................................................................TATTGTCCTGTCACAGCAGTAT.........................................................................................................................................................................................2211.00110
.........................................................................................................................ATTGTCCTGTCACAGCAGTT..........................................................................................................................................................................................2011.00110
.....................................................................................................................................................................ACTGCTGAGCCGGGGCATTAAC............................................................................................................................................2211.00110
.......................................................................................................................ATATTGTCCTGTCACAGCAGTAAA........................................................................................................................................................................................2411.00110
.......................................................................................................................ATATTGTCCTGTCACAGCAGA...........................................................................................................................................................................................2111.00101
.......................................................................................................................ATATTGTCCTGTCACAGCAGG...........................................................................................................................................................................................2111.00101
........................................................................................................................TATTGTCCTGTCACAGCA.............................................................................................................................................................................................1811.00110
......................................................................................................................GATATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................2311.00110
.........................................................................................................................ATTGTCCTGTCACAGCAGTA..........................................................................................................................................................................................2011.00110
......................................................................................................................................................................CTGCTGAGCCGGGGCATTAAC............................................................................................................................................2111.00110
.........................................................................................................................ATTGTCCTGTCACAGCAG............................................................................................................................................................................................1811.00110
.......................................................................................................................ATATTGTCCTGTCACAGCTA............................................................................................................................................................................................2020.50101

Generated: 10/20/2015 at 10:16 PM