ID:

der_690

 Coordinate:

scaffold_4784:1553197-1553347 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-2.2 -2.2 -2.0

Flybase annnotation

exon [dere_GLEANR_14937:1]; CDS [Dere\GG14802-cds]; intron [Dere\GG14802-in]

No Repeatable elements found

Sense Strand Reads

-------------------------------###################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
AAACAAAGATTTTATTATACTGTATGCAACAATGGCAGCCGCTGATCTAGGTTCCCCACTCAAGCGGTCTTCAAGCTAGATTCCCCTCGGCATTTATTTACGTGTTTATTTCCGTTTCGCTCAAAGATACCAAAAACCAAGTTTTTCCCTCTTTTATTTTGATTTCCCCTTTTGACAACCTTTTTTGTGATAAGCTCTCGTCGTGCTTCTATTTACTTCTGTTTGTAAATGTTTAAACCAATTGTATAAAA
************************************************************************************************..........................(((((....((((((...))))))...)))))...............********************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M055
female body
 GSM1528801
follicle cells		 V107
male body		 V108
head
 V040
embryo
................................................................................................................................................TTCCCTCTTTTATTTTGATTTCCCC.................................................................................. 25 0 1 3.00 3 0 3 0 0 0
.....................................................................................................................CGCTCAAAGATACCAAAAACCAAGTTT........................................................................................................... 27 0 1 2.00 2 1 0 0 1 0
..................................................................................................................................................................TTTCCCCTTTTGACAACC....................................................................... 18 0 1 1.00 1 0 0 0 1 0
..........................................TGATCTAGGTTCCCCACTCAAGCGGTC...................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
................................................................................................TTTACGTGTTTATTTCCGTTTCGCTC................................................................................................................................. 26 0 1 1.00 1 0 0 1 0 0
.......................................................................................................................................................................................................................CTTCTGTTTGTCAATGTTTA................ 20 1 1 1.00 1 0 0 1 0 0
.............................................................................AGATTCCCCTCGGCATTTATTTACGT.................................................................................................................................................... 26 0 1 1.00 1 0 0 1 0 0
................................................................................TTCCCCTCGGCATTTATTTACGT.................................................................................................................................................... 23 0 1 1.00 1 1 0 0 0 0
............................ACAATGGCAGCCGCTGATC............................................................................................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0
...........................AACAATGGCAGCCGCTGATCTAGGTT...................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................................................................TTTTGACAACCTTTTTTGTG.............................................................. 20 0 1 1.00 1 1 0 0 0 0
....................................................................CTTCAAGCTAGACTCCCCTCACC................................................................................................................................................................ 23 3 1 1.00 1 0 0 0 0 1
........................................................................................................................................................................................TTGTGATAAGCTCTCGTCGTGC............................................. 22 0 1 1.00 1 0 0 0 0 1
.......................................................................................................GTTTATTTCCGTTTCGCTCAAAGA............................................................................................................................ 24 0 1 1.00 1 0 0 1 0 0
.......GATTTTATTATACTGTATGC................................................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0
...............................................TAGGTTCCCCACTCAAGCGGTCTTCAAGC............................................................................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................TCCCCTTTTGACAACCTTTT................................................................... 20 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................TTCCCTCTTTTATTTTGCTTTCCCC.................................................................................. 25 1 1 1.00 1 0 1 0 0 0
...............................................................................................................................................................TGATTTCCCCTTTTGACAACCTTTTTTG................................................................ 28 0 1 1.00 1 1 0 0 0 0
.......................ATGCAACAATGGCAGCCGCTGATCTA.......................................................................................................................................................................................................... 26 0 1 1.00 1 0 0 0 1 0
..............TTATACTGTATGCAACAATGGCAGCCGC................................................................................................................................................................................................................. 28 0 1 1.00 1 1 0 0 0 0
......................................................CCCACTCAAGCGGTCTTCAAGCTAGATTC........................................................................................................................................................................ 29 0 1 1.00 1 0 1 0 0 0
...............TATACTGTATGCAACAATGGCAGCCGC................................................................................................................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................TTTGACAACCTTTTTTGTGATAAGCTCT..................................................... 28 0 1 1.00 1 1 0 0 0 0
............TATTATACTGTATGCAACAATGGCAGC.................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0
...........TTATTATACTGTATGCAACAATGGCA...................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
....................TGTATGCAACAATGGCAGCCGCTGATC............................................................................................................................................................................................................ 27 0 1 1.00 1 1 0 0 0 0
...................................................................................................................TTCGCTCAAAGATACCAAAAACCAAGT............................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................................................................TAAGCTCTCGTCGTGCTTCTATTTA.................................... 25 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................TTACCTCTTTTATTTTGATTTCCCC.................................................................................. 25 1 1 1.00 1 0 1 0 0 0
......................................................CCCACTCAAGCGGTCTTCAAGCTAGAA.......................................................................................................................................................................... 27 1 1 1.00 1 1 0 0 0 0
.......................ATGCAACAATGGCAGCCGCT................................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0
.......................................................................................................................................................................................TTTGTGATAAGCTCTCGTCGTGCTTC.......................................... 26 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................................TTTTCCCTCTTTTATTTTGAT........................................................................................ 21 0 1 1.00 1 1 0 0 0 0

Anti-sense strand reads

TTTGTTTCTAAAATAATATGACATACGTTGTTACCGTCGGCGACTAGATCCAAGGGGTGAGTTCGCCAGAAGTTCGATCTAAGGGGAGCCGTAAATAAATGCACAAATAAAGGCAAAGCGAGTTTCTATGGTTTTTGGTTCAAAAAGGGAGAAAATAAAACTAAAGGGGAAAACTGTTGGAAAAAACACTATTCGAGAGCAGCACGAAGATAAATGAAGACAAACATTTACAAATTTGGTTAACATATTTT
**********************************************************************************..........................(((((....((((((...))))))...)))))...............************************************************************************************************ 		Read size # Mismatch Hit Count Total Norm Total M057
embryo
 M055
female body
 V108
head
.................................................................................................................................................................................TGAAAAAAAGACTATTCGA....................................................... 19 2 6 5.67 34 34 0 0
.................................................................................................................................................................................TGAAAAAAAGACTATTCG........................................................ 18 2 20 0.80 16 16 0 0
.................................................................................................................................................................................TGAAAAAAAGACTATTCGAGC..................................................... 21 3 6 0.33 2 2 0 0
.............................................................................................................................................AAAAAGGGAGAAAACAAA............................................................................................ 18 1 10 0.10 1 0 1 0
..............................................................................................................AGGTAAAGCGAGTTTCAATA......................................................................................................................... 20 3 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4784:1553147-1553397 + der_690 AAACAAA-GATTTTATTA---------TACTGTATGCAACAATGGCAGCCGCTGA-TC--TAG---GTTCCC------C-AC------TCA--AGCGG--TCTTCAAGCTAG--ATT-C-CCCT----CGGCATTTA--TTTACGTGTTTATTTCCGTTT-CGCTCA---AAGATACCAAAAA---------------------CCAAGTTT-TT------------CCC-------------------------------------------------------------------------------------------TCTTTTATTTTGATTT-CC----C--CTTTTGACAAC-CT--TTTTTGTGATAAGCTC-TCGTCGTGCTT---------------CT-ATTTACTTCT-------------GTTTGTAAATGTTT--------AAA-C--------CAATTGTATAAA---A
droYak3 3L:1524706-1524951 + dya_663 AAACCAA-GATTTTATTA---------TACTGTATGCAACAATGGCAGCCGCCGA-TT--TAG---GTCCCC------C-AC------TCG--AGCGG--TCTTCAAGCTAG--ATT-C-CCCT----CAGCATTTA--TTTACGT----GTTTCCGTTT-CGCTCA---AAGATACCAAAAA---------------------CCAAGTTT-TT------------CCT-------------------------------------------------------------------------------------------TCTTTTACTTTGATTT-CC----C--CTTTTGACAAC-CC-TTTTTTGTGATAAGCTC-TCGTCGTGCTT---------------CT-ATTTACTTCT-------------GTTTGTAAATGTTT--------AAA-C--------CAATTGTATGA-----
droSec2 scaffold_2:1600931-1601176 + AAACAAA-GATTTTATTT---------TACTGTATGCAACAATGGCAGTCGCTGA-AC--AGG---ATTTCC------C-AT------TCA--AGCGG--TCTTCAAGCTAG--ATT-C--CCT----CAGCATTTA--TTTACGT----GTTTCCGTTT-CGCTCA---AAGATACCAAAAA---------------------CTAAGTTT-TT------------CCA-------------------------------------------------------------------------------------------TCTTTTATTTTGATTT-AA----C--CTTTTGACCAC-CT--TTTTTGTGATAAGCTC-TCGTCGTGCTT---------------CT-ATTTACTTCT-------------GTTTGTAAATGTTT--------AAA-C--------CAATTGTATAAA---A
droSim2 3l:1484586-1484831 + AAACAAA-GATTTTATTA---------TACTGTATGCAACAATGGCAGTCGCTGA-AC--AGG---ATTTCC------C-AT------TCA--AGCGG--TCTTCAAGCTAG--AT--C-CCCT----CAGCATTTA--TTTACGT----GTTTCCGTTT-CGCTCA---AAGATACCAAAAA---------------------CTAAGTTT-TT------------CCA-------------------------------------------------------------------------------------------TCTTTTATTTTGATTT-CC----C--CTTTTGACCAC-CT--TTTTTGTGATAAGCTC-TCGTCGTGCTT---------------CT-ATTTACTTCT-------------GTTTGTAAATGTTT--------AAA-C--------CAATTGTATAAA---A
dm3 chr3L:1574447-1574692 + AAACAAA-GATTTTATTA---------TACTGTATGCAACAATGGCAGTCGCTGA-AC--AGG---ATTCCC------C-AT------TCA--AGCGA--TCTTCAAGCTAG--TTT-C-CCCT----CAGCATTTA--TTTACGT----GTTTCCGTTT-CGCTCA---AAGATACCAAAAA---------------------CGAAGTTT-TT------------CCT-------------------------------------------------------------------------------------------TCTTTTATTTTGATTT-CC----C--CTTTTGACCAC-CC---TTTTGTGATAAGCTC-TCGTCGTCCTT---------------CT-ATTTACTTCT-------------GTTTGTAAATGTTT--------AAA-C--------CAATTGTATAAA---A
droEug1 scf7180000409007:391243-391496 + AAACAAA-GATTTTATTA---------TACTATATGCAAAATCGGCCACTGCTGAACC--TAG---GTTCTGTAACTTT-GT------TCA--AGCAG--TCTTCAAGTTAG--TTT-C--CCT----CAGCATTTA--TTTACGT----ATTTCCGTTT-CGCTCA---AAGATACCAAAAAA--------------------CAAAGTTT-TT------------CCT-------------------------------------------------------------------------------------------TCTTTTG-----ATTT-TGATTCC--CTATTGACAAC-CT-TTTTTTGTGATAAGCTC-TCGTCGTGCTT---------------CT-ATTTACTTCT-------------GTTTGTAAATGTTT--------AAA-C--------CAATTGTATAAA---A
droBia1 scf7180000300910:1687969-1688183 + AAACAAA-GATTTTATTA---------TACTGTACGCAAC-----------------------------------------------------AGCAG--TCTTCAAGTTAG--ATT-C-CCCT----CAGCATTTA--CTTACGT----ATTTTCGTTT-CGCTCA---AAGATACCAAAAA---------------------CCAAGTTTTTT------------CCT-------------------------------------------------------------------------------------------TCTCTTATTTTGATTT-C-----C--CTTTTGACCAC-AT--TTTTTGTGATAAGCTC-TCGTCGTGCTT---------------CT-ATTTACTTCT-------------GTTTGTAAATGTTT--------AAA-C--------CAATTGTATAAA---A
droTak1 scf7180000415095:223589-223836 - AAACAAA-GATTTTATTACCT-----GTACTGTATGCAA---------------------TAG---ATTCTC------T-AT------TCA--AGCGG--TCTTCAAGTTAG--ATT-CCCCCT----CAGCATTTA--TTTACGT----ATTTCCGTTT-CGCTCA---AAGATACCAAAAAAA-------------------CAAAGTTT-TT------------CTT-------------------------------------------------------------------------------------------TCTTTTATTTTGATTT-CC----CCCGTTTTGACAACATTTTTTTTTGTGATAAGCTC-TCGTCGTGCTT---------------CT-ATTTACTTCT-------------GTTTGTAAATGTTTAAA-CTTTAAA-C--------CAATTGTATAAA---A
droEle1 scf7180000491249:4015740-4015993 - AAACAAA-GATTTTATTA---------TACTGTATACAATATCGGTAGCTGCTGCAAC--TAG---ATTCTT------C-GT------TCAACAGCAG--TCTTCAAGTTAG--ATT-C-GCCT----CAGCATTTA--TTTACGT----ATTTCCGGTT-CGCTCA---AAGATACCAAAAAA--------------------CTAAGTTT-TT------------CTT-------------------------------------------------------------------------------------------TATTTTCTTTTGATTT-TTCTTC-----CCTGACAAA-CTTTTTTTTGTGATAAGCTC-TCGTCGTGCTT---------------CT-ATTTACTTCT-------------GTTTGTAAATGTTT--------AAA-T--------CCATTGTATAAA---A
droRho1 scf7180000776850:380556-380804 - AAACAAA-GATTTTATTA---------TACTGTATACAATATCGGCAGCTGCTAA-AC--TAG---GTTCTT------G-GT------TCG--AGCGG--TATTCAAGTTAG--ATT-C-CCTT----CAGCATTTA--TTTACGT----ATTTCCGTTT-CGCTCA---AAGATACCAAAAA---------------------CAATGTTT-TT------------CTT-------------------------------------------------------------------------------------------TATTTTCTTTTAATTT-GC----C--CCTTTGACAAC-CTTTTTTTTGTGATAAGCTC-TCGTCGTGCTT---------------CT-AATTACTTCT-------------GTTTGTAAATGTTT--------AAA-C--------CAATTGTATAAA---A
droFic1 scf7180000454113:509524-509773 - AAACAAA-GATTTTATTA---------CACTGTATGCAACA---GCAGCAGCTGA-ACTATAGATGAT---T------A-GT------TC---GGCAG--TCTTCAAGATAG--ATT-C-CCCT----CAGCATTTA--TTTACGT----ATTTCCGTTT-CGCTCA---AAGATACCAAAAAA--------------------CATAGTTT--T------------CTT-------------------------------------------------------------------------------------------TCATTTATTTTGGTTTGCC----CCCCTTTTGACCAC-CT-TCTTTTGTGATAAGCTC-TCGTCGTGCTTT--------------CT-ATTTACTTCT-------------GTTTGTAAATGTTT--------AAA-C--------CAATTGTATAAA---A
droKik1 scf7180000302510:927468-927699 - AAACAAA-GATTTTATTA---------TACTCTACGCAGT---------C---------------------------------------C---GGAAGTTTCCTCAAGTTAT--ATT-C-CCTT----CAGCATTTA--TTTACTC----GTTTCCGTTT-CGCTCAAAAAAGGTACCAAAAAAA---------G---------CAAAGTTT-AA------------TTT-------------------------------------------------------------------------------------------TCTTTTGTTTTGATTT-CT----C--C-TTTGACCCG-CTCTTTTTTGTGATAAGCTC-TCGTCGTGCTT---------------CT-ATTTACTTCT-------------GTTTGTAAATGTT-AAA-CCTTAAA-C--------CAATTGTATAAA---A
droAna3 scaffold_13337:12444173-12444437 + AAACAAA-GATTTTATTA---------AACTGTAT----------------------C--TAG---ATTCAT------TTTT------TTG--AGCAG--ATTTCAAGTTAGTAACTCCCCCTT----CAGCATTTAATTTTACGT----ATTTCCGTTTCCGCTCA---AAGATACCAAAATA---------------------AATGATT--A------------TTTTCTTTTATGATTATTAATTATTATTATTTTTTTTTTTGAGAAA--AAGAAA----------------------------------------------------------C----C--TGTTTGATC---CT-TCTTTTGTGATAAGCTC-TCGTCGTGCTT---------------CT-ATATATTTCC-------------GTTTGTAAATGTTT-------TAAT-C--------CAATTGTATAAA---A
droBip1 scf7180000396589:1543529-1543785 - AAACAAA-GATTTTATTA---------AATTGTATG------------TCGGAGA-AG--TAG---ATTTCA------T-TT------TTT--ATCAG--CCTTCAAGTTAGTAATTTCCTCTT----CAGCATTTA--TTTACGT----AATTCCGTTT-CGCTCA---AAGATACCAAAAAAAATAAACAAAAT----AAAACAAAGTTT-TC------------TTT-----TATGAA------------------TTTTTTTTGAGAAAAAAATAAA----------------------------------------------------------C----C---------CCTT-C--TTTTTTGTGATAAGCTCCTTGTCGTGCTT---------------CT-AT----TTCC-------------GTTTGTAAATGTTT--------AAT-C--------CAATTGTAAAAA---A
dp5 XR_group6:6343943-6344221 - AAACAAATGATTTTATTACATATATGGTATTGTAT--------GGCAG------------TAG---ATTCCG------TTTTCCCAACCCA--ACCCC--AACTCAAACCCG--AAC-C-CCTTCAGGCAGCATTTA--CT----------------TTT-CGCTCAA--AAGATACCAAAAAAAA-AA-----GCAAAAACCCCAGAGTTT-TCTTTTAGTTTCCCTTTG-------------------------------TTTT---------------CCCCTCCCTTTTGTGATAGACCTCAAACCC-------------------------------------------------------------TAAGCTC-TTGTCGTGCTTTCGTCTATATATTTC-GTG------TTT-------------CTTTGTAAATGTTTAAATCTTTAAATC--------AAATTGTATAAA---A
droPer2 scaffold_82:254361-254636 + AAACAAATGATTTTATTACATATATTGTATTGTAT--------GGCAG------------TAG---ATTCCG------TTTTCCCAACCCA--ACCCC--AACCCCAACTCG--AAC-C-CCTTCAGGCAGCATTTA--CT----------------TTT-CGCTCAA--AAGATACCAAAAAAA---------GCAAAAACCCCAGAGTTT-TCTTTTAGTTTCTCTTTG-------------------------------TTTT---------------CCCCTCCCTTTTGTGATAGACCTCAAACCC-------------------------------------------------------------TAAGCTC-TTGTCGTGCTTTCGTCTATATATTTC-GTG------TTT-------------CTTTGTAAATGTTTAAATCTTTAAATC--------AAATTGTATAAA---A
droWil2 scf2_1100000004729:47461-47591 - CAAA-------TTTAT-------------------------------------------------------------------------------------------CCT-------------------------------------------------------------------------------------------------AGTTT-CATTTTACTTACTTTTTTC--CCATAAA------------------TTGTTT----------------------------------------------------------------------------------------------TT-TTTTTTGTGATAGGCTC-T---CGTGCTT---------------TT-ATTT---TTT-------------CTTTGTAAATGTTT-----TCTAAAAAAAAAAGTATATATGTATAAATTGA
droMoj3 scaffold_6680:10712465-10712571 + TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT----------------------------------------------------GATTTTCTTTTGTGATAGA-CTCAAATCGAAAGCTCTTG---------------------------------------------------------C-TTTTTATGTTT---------------CTTATTTTTTTTT----TATAAAACCTTTTGTAAATGTTT--------AAA-C--------GAATTGTATAAA---C
droGri2 scaffold_15110:20648053-20648203 - -------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-AGCTCA---AAGATACCAAAAAA---------------------AAAACAT-TC------------TTTGC------------------------------TTTT---------------TGATTTCCTTTTGTGATAG-CCTCAAATCGAAAGCTCGTG---------------------------------------C-TTT-------TAA------------GTTCGCGTGCAT-------AT-GTTTT--TTTCTTTGATTAA--CTTTTGTAAATGTTT--------AAA-C--------AAATTGTATAAA---A

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
AAACAAA-GATTTTATTA---------TACTGTATGCAACAATGGCAGCCGCTGA-TC--TAG---GTTCCC------C-AC------TCA--AGCGG--TCTTCAAGCTAG--ATT-C-CCCT----CGGCATTTA--TTTACGTGTTTATTTCCGTTT-CGCTCA---AAGATACCAAAAA---------------------CCAAGTTT-TT------------CCC-------------------------------------------------------------------------------------------TCTTTTATTTTGATTT-CC----C--CTTTTGACAAC-CT--TTTTTGTGATAAGCTC-TCGTCGTGCTT---------------CT-ATTTACTTCT-------------GTTTGTAAATGTTT--------AAA-C--------CAATTGTATAAA---ASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.....................................................................................................................................................................................................................TT------------CCC-------------------------------------------------------------------------------------------TCTTTTATTTTGATTT-CC----C--C.......................................................................................................................................2513.0030000003
.................................................................................................................................................................CGCTCA---AAGATACCAAAAA---------------------CCAAGTTT-..............................................................................................................................................................................................................................................................................2712.0021000010
..............................................................................................................................................................................................................................................................................................................................................TTT-CC----C--CTTTTGACAAC-C...........................................................................................................................1811.0010000010
....................................................TGA-TC--TAG---GTTCCC------C-AC------TCA--AGCGG--TC.............................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
...........................................................................................................................................TTTACGTGTTTATTTCCGTTT-CGCTC.............................................................................................................................................................................................................................................................................................................................2611.0010000100
..............................................................................................................AG--ATT-C-CCCT----CGGCATTTA--TTTACGT.................................................................................................................................................................................................................................................................................................................................................2611.0010000100
...................................................................................................................TT-C-CCCT----CGGCATTTA--TTTACGT.................................................................................................................................................................................................................................................................................................................................................2311.0011000000
......................................ACAATGGCAGCCGCTGA-TC--.......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0011000000
.....................................AACAATGGCAGCCGCTGA-TC--TAG---GTT..............................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
............................................................................................................................................................................................................................................................................................................................................................TTTTGACAAC-CT--TTTTTGTG................................................................................................................2011.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................TTGTGATAAGCTC-TCGTCGTGC..............................................................................................2211.0010001000
..................................................................................................................................................GTTTATTTCCGTTT-CGCTCA---AAGA.....................................................................................................................................................................................................................................................................................................................2411.0010000100
........GATTTTATTA---------TACTGTATGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
............................................................TAG---GTTCCC------C-AC------TCA--AGCGG--TCTTCAAGC......................................................................................................................................................................................................................................................................................................................................................................................2911.0011000000
................................................................................................................................................................................................................................................................................................................................................T-CC----C--CTTTTGACAAC-CT--TTT.....................................................................................................................2011.0011000000
...........................................................................................................................................................................................................................................................................................................................................TGATTT-CC----C--CTTTTGACAAC-CT--TTTTTG..................................................................................................................2811.0011000000
.................................ATGCAACAATGGCAGCCGCTGA-TC--TA.....................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000010
...............TTA---------TACTGTATGCAACAATGGCAGCCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0011000000
......................................................................CC------C-AC------TCA--AGCGG--TCTTCAAGCTAG--ATT-C-...........................................................................................................................................................................................................................................................................................................................................................................2911.0010000001
................TA---------TACTGTATGCAACAATGGCAGCCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
.............................................................................................................................................................................................................................................................................................................................................................TTTGACAAC-CT--TTTTTGTGATAAGCTC-T......................................................................................................2811.0011000000
.............TATTA---------TACTGTATGCAACAATGGCAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
............TTATTA---------TACTGTATGCAACAATGGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
..............................TGTATGCAACAATGGCAGCCGCTGA-TC--.......................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
..............................................................................................................................................................TT-CGCTCA---AAGATACCAAAAA---------------------CCAAGT.................................................................................................................................................................................................................................................................................2711.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................TAAGCTC-TCGTCGTGCTT---------------CT-ATTTA.....................................................................2511.0011000000
......................................................................CC------C-AC------TCA--AGCGG--TCTTCAAGCTAG--AA...............................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
.................................ATGCAACAATGGCAGCCGCT..............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................TTTGTGATAAGCTC-TCGTCGTGCTT---------------C............................................................................2611.0011000000
..................................................................................................................................................................................................................TT-TT------------CCC-------------------------------------------------------------------------------------------TCTTTTATTTTGAT....................................................................................................................................................2111.0011000000
droYak3
AAACCAA-GATTTTATTA---------TACTGTATGCAACAATGGCAGCCGCCGA-TT--TAG---GTCCCC------C-AC------TCG--AGCGG--TCTTCAAGCTAG--ATT-C-CCCT----CAGCATTTA--TTTACGT----GTTTCCGTTT-CGCTCA---AAGATACCAAAAA---------------------CCAAGTTT-TT------------CCT-------------------------------------------------------------------------------------------TCTTTTACTTTGATTT-CC----C--CTTTTGACAAC-CC-TTTTTTGTGATAAGCTC-TCGTCGTGCTT---------------CT-ATTTACTTCT-------------GTTTGTAAATGTTT--------AAA-C--------CAATTGTATGA-----SizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
......................................................................................................................................................................................................................................................................................................................................................................................AGCTC-TCGTCGTGCTT---------------CT-..........................................................................1812.00220000000000
.....................................................GA-TT--TAG---GTCCCC------C-AC------TCG--AGCGG--T..............................................................................................................................................................................................................................................................................................................................................................................................2512.00201000010000
......................................................................................................................................................GTTTCCGTTT-CGCTCA---AAG......................................................................................................................................................................................................................................................................................................................1912.00211000000000
.....................................................GA-TT--TAG---GTCCCC------C-AC------TCG--AGC...................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
............................ACTGTATGCAACAATGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000
..........................................................................................................................................................................................................................................................................................................................................................................................C-TCGTCGTGCTT---------------CT-ATTTACTTCT-------------...................................................2411.00110000000000
..................................................................................................................................................................................................................................................................................................................................................................................GATAAGCTC-TCGTCGTGCTT---------------C............................................................................2111.00100000010000
.....................................................................................................................................................................CA---AAGATACCAAAAA---------------------CCAAGTT................................................................................................................................................................................................................................................................................2211.00101000000000
.............................................................................................................................................................................ATACCAAAAA---------------------CCAAGTTT-TT------------CCT-------------------------------------------------------------------------------------------T.................................................................................................................................................................2411.00101000000000
...............................................................................................................................................................................ACCAAAAA---------------------CCAAGTTT-TT------------C...............................................................................................................................................................................................................................................................1911.00101000000000
......................................................................................................................................................GTTTCCGTTT-CGCTCA---AAGAT....................................................................................................................................................................................................................................................................................................................2111.00100100000000
......................................................................................................................................TTA--TTTACGT----GTTTCCGTTT-CGCT..............................................................................................................................................................................................................................................................................................................................2411.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................GATAAGCTC-TCGTCGTGCTT---------------CT-AT........................................................................2411.00100000010000
................................................................................................GG--TCTTCAAGCTAG--ATT-C-CCCT----C..................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
.................................................................................................................................................................CGCTCA---AAGATACCAAAAA---------------------CCAAGTTT-..............................................................................................................................................................................................................................................................................2711.00100100000000
...............................................................................................................................................................................................................................................................................................................................................................................TGTGATAAGCTC-TCGTCGTGCTT---------------C............................................................................2411.00101000000000
............................................................................................................................................TTACGT----GTTTCCGTTT-CGCT..............................................................................................................................................................................................................................................................................................................................2011.00101000000000
..ACCAA-GATTTTATTA---------TACTGTATGCAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00110000000000
.....................................................GA-TT--TAG---GTCCCC------C-AC------TCG--AGCGG--TCTT...........................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
..................................................................................................................................................................................................................................................................................................................................CTTTTACTTTGATTT-CC----C--CTTTT...................................................................................................................................2311.00101000000000
.....................................................................................................................................................................................................................TT------------CCT-------------------------------------------------------------------------------------------TCTTTTACTTTGATTT-CC----C--C.......................................................................................................................................2511.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................T-ATTTACTTCT-------------GTTTGTAAAT.........................................2111.00101000000000
................TA---------TACTGTATGCAACAATGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.........................................................................................................AAGCTAG--ATT-C-CCCT----CAGCAT.............................................................................................................................................................................................................................................................................................................................................................2111.00101000000000
.................A---------TACTGTATGCAACAATGGCAGCCGCCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000
............................................................................................................................................................................................................................................................................................................................................................TTTTGACAAC-CC-TTTTTTGTGATAAGC..........................................................................................................2711.00101000000000
.......................................................................................................................................................TTTCCGTTT-CGCTCA---AAG......................................................................................................................................................................................................................................................................................................................1811.00101000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TC-TCGTCGTGCTT---------------CT-ATTTACTTCT-------------GTTT...............................................2911.00101000000000
.................................................................................................G--TCTTCAAGCTAG--ATT-C-CCCT----CA.................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000
...............................................................................................................................................................................................................................................................................................................................................................................TGTGATAAGCTC-TCGTCGTGCTT---------------.............................................................................2311.00100000010000
droSec2
AAACAAA-GATTTTATTT---------TACTGTATGCAACAATGGCAGTCGCTGA-AC--AGG---ATTTCC------C-AT------TCA--AGCGG--TCTTCAAGCTAG--ATT-C--CCT----CAGCATTTA--TTTACGT----GTTTCCGTTT-CGCTCA---AAGATACCAAAAA---------------------CTAAGTTT-TT------------CCA-------------------------------------------------------------------------------------------TCTTTTATTTTGATTT-AA----C--CTTTTGACCAC-CT--TTTTTGTGATAAGCTC-TCGTCGTGCTT---------------CT-ATTTACTTCT-------------GTTTGTAAATGTTT--------AAA-C--------CAATTGTATAAA---ASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................ATGCAACAATGGCAGTCGCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2112.0020020
..............................................................G---ATTTCC------C-AT------TCA--AGCGG--TC.............................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
.....................................AACAATGGCAGTCGCTGA-AC--AGG---.................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100
.........................................................................................CA--AGCGG--TCTTCAAGCTAG--ATT-C--..........................................................................................................................................................................................................................................................................................................................................................................2311.0010100
AAACAAA-GATTTTATTT---------TACT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010010
.....................................................GA-AC--AGG---ATTTCC------C-AT------TCA--AGCGG--T..............................................................................................................................................................................................................................................................................................................................................................................................2511.0010100
........................................................................................................................................................TTCCGTTT-CGCTCA---AAGATACCAAA..............................................................................................................................................................................................................................................................................................................2511.0011000
.........................................ATGGCAGTCGCTGA-AC--AGG---.................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
...............................GTATGCAACAATGGCAGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
......................................................A-AC--AGG---ATTTCC------C-AT------TCA--AGCGG--T..............................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
......................................................................................................TTCAAGCTAG--ATT-C--CCT----CA.................................................................................................................................................................................................................................................................................................................................................................1911.0010010
...................................GCAACAATGGCAGTCGCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010
...........................TACTGTATGCAACAATGGCAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000
..............................................................G---ATTTCC------C-AT------TCA--AGCGG--TCTT...........................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
.....................................................................TCC------C-AT------TCA--AGCGG--TCTTCAAGCTAG--A................................................................................................................................................................................................................................................................................................................................................................................2711.0011000
...................................................................................................................................CATTTA--TTTACGT----GTTTCCGTTT-CGCTC.............................................................................................................................................................................................................................................................................................................................2811.0011000
...............................................................................................................................................................................................................................................................................................................................................................TGACCAC-CT--TTTTTGTGATAAGCTC-.......................................................................................................2511.0011000
.................................................................................................................................................................................................................................................................................................................................................................................TGATAAGCTC-TCGTCGTGCTT---------------CT-AT........................................................................2511.0010001
droSim2
AAACAAA-GATTTTATTA---------TACTGTATGCAACAATGGCAGTCGCTGA-AC--AGG---ATTTCC------C-AT------TCA--AGCGG--TCTTCAAGCTAG--AT--C-CCCT----CAGCATTTA--TTTACGT----GTTTCCGTTT-CGCTCA---AAGATACCAAAAA---------------------CTAAGTTT-TT------------CCA-------------------------------------------------------------------------------------------TCTTTTATTTTGATTT-CC----C--CTTTTGACCAC-CT--TTTTTGTGATAAGCTC-TCGTCGTGCTT---------------CT-ATTTACTTCT-------------GTTTGTAAATGTTT--------AAA-C--------CAATTGTATAAA---ASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........................................................................................................................................................................................................................................................................................................................................................................T--TTTTTGTGATAAGCTC-TCGTCGTGC..............................................................................................26140.00400000001919001001000
............................................................................................................................................................................................................................................................................................................................................................................TTTTGTGATAAGCTC-TCGTCGTGC..............................................................................................24113.001300000075001000000
..........TTTTATTA---------TACTGTATGCAACAATGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................27111.001100000055000010000
..................................TGCAACAATGGCAGTCGCTGA-AC--AGG---A................................................................................................................................................................................................................................................................................................................................................................................................................................2718.00800010042000010000
..................................TGCAACAATGGCAGTCGCTGA-AC--AGG---AT...............................................................................................................................................................................................................................................................................................................................................................................................................................2815.00500000032000000000
..........TTTTATTA---------TACTGTATGCAACAATGGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2815.00500000021000011000
.....................................................................TCC------C-AT------TCA--AGCGG--TCTTCAAGCTAG--A................................................................................................................................................................................................................................................................................................................................................................................2715.00500000050000000000
..............................................................................................................................................................................................................................................................................................................................................................................TTGTGATAAGCTC-TCGTCGTGCTT---------------C............................................................................2515.00500000040010000000
.............................................................................................................................................................................................................................................................................................................................................................................TTTGTGATAAGCTC-TCGTCGT................................................................................................2114.00401001000000002000
............................................................................................................................................................................................................................................................................................................................................................................TTTTGTGATAAGCTC-TCGTCGTG...............................................................................................2314.00400000040000000000
...........................................................................................................................................................................................................................................................................................................................................................................TTTTTGTGATAAGCTC-TCGTCGTGC..............................................................................................2514.00400000031000000000
........................................................................................................................................................................................................................................................................................................................................................................T--TTTTTGTGATAAGCTC-TCGTCGTG...............................................................................................2514.00400000012100000000
.........ATTTTATTA---------TACTGTATGCAACAATGGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2913.00300000030000000000
......................................ACAATGGCAGTCGCTGA-AC--AGG---ATT..............................................................................................................................................................................................................................................................................................................................................................................................................................2513.00300000010100010000
.................A---------TACTGTATGCAACAATGGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.00301200000000000000
......................................ACAATGGCAGTCGCTGA-AC--AGG---AT...............................................................................................................................................................................................................................................................................................................................................................................................................................2413.00300000020000010000
..........TTTTATTA---------TACTGTATGCAACAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2413.00300100011000000000
..........TTTTATTA---------TACTGTATGCAACAATGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00300000021000000000
...........TTTATTA---------TACTGTATGCAACAATGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2613.00300010020000000000
...................................................................................................................................................................................................................................................................................................................................................................CAC-CT--TTTTTGTGATAAGCTC-TCGTCGTGC..............................................................................................3012.00200000020000000000
.......................................................................................................................................................................................................................................................................................................................................................................CT--TTTTTGTGATAAGCTC-TCGTCGTGC..............................................................................................2712.00200000011000000000
...............................................GTCGCTGA-AC--AGG---ATTTCC------C-...................................................................................................................................................................................................................................................................................................................................................................................................................2012.00202000000000000000
................................................................................................................................................................................................................................................................................................................................................................................GTGATAAGCTC-TCGTCGTGCTT---------------C............................................................................2312.00202000000000000000
.............TATTA---------TACTGTATGCAACAATGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00200000010010000000
..............................................................................................................................................................................................................................................................................................................................................TTT-CC----C--CTTTTGACCAC-CT--TT......................................................................................................................2112.00200002000000000000
.....................................................................................................................................................................................................................................................................................................................................................................C-CT--TTTTTGTGATAAGCTC-TCGTCGTGC..............................................................................................2812.00200000011000000000
..............................................................................................................................................................................................................................................................................................................................................................TTGACCAC-CT--TTTTTGTGATA.............................................................................................................2112.00200002000000000000
..............................TGTATGCAACAATGGCAGTCGCTGA-AC--A......................................................................................................................................................................................................................................................................................................................................................................................................................................2812.00200000020000000000
..............................................................................................................................................................TT-CGCTCA---AAGATACCAAAAA---------------------CTAAGT.................................................................................................................................................................................................................................................................................2712.00200000020000000000
.............................................................................................................................................TACGT----GTTTCCGTTT-CGCTCA---AAGA.....................................................................................................................................................................................................................................................................................................................2512.00200000020000000000
.............................................................................................................................................................................................................................................................................................................................................................................TTTGTGATAAGCTC-TCGTCGTGCTT---------------C............................................................................2612.00200000010010000000
..................................................................................................................................................................................................................................................................................................................................................................................GATAAGCTC-TCGTCGTGC..............................................................................................1812.00202000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................TTGTGATAAGCTC-TCGTC..................................................................................................1812.00202000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................CGTGCTT---------------CT-ATTTACTTCT-------------GT.................................................2111.00100001000000000000
....................................CAACAATGGCAGTCGCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00101000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................GATAAGCTC-TCGTCGTGCTT---------------CT-..........................................................................2211.00101000000000000000
......................................................................................................................................................................A---AAGATACCAAAAA---------------------CTAAGTT................................................................................................................................................................................................................................................................................2111.00100001000000000000
.........................................ATGGCAGTCGCTGA-AC--AGG---A................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00101000000000000000
.........................................ATGGCAGTCGCTGA-AC--AGG---ATTTC............................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000000001000
............TTATTA---------TACTGTATGCAACAATGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000001000000000
...............................................GTCGCTGA-AC--AGG---ATTTCC------C-AT------T..........................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000010000000
.....................................................................................................................................................................................................................................................................................................................................................................................AAGCTC-TCGTCGTGCTT---------------CT-..........................................................................1911.00110000000000000000
................................TATGCAACAATGGCAGTCGCTGA-AC--A......................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................TGTGATAAGCTC-TCGTCGTGCTT---------------CT-AT........................................................................2711.00100000010000000000
...................................................................................................................................................................................................................................................................................................................................................................................ATAAGCTC-TCGTCGTGCTT---------------CT-..........................................................................2111.00100100000000000000
.................A---------TACTGTATGCAACAATGGCAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTTT--------AAA-C--------CAATTGTATA......2111.00100001000000000000
............................................................................................................................................................................................................................................................................................................................................................................................TCGTCGTGCTT---------------CT-ATTTA.....................................................................1811.00100000000001000000
...................................................................TTTCC------C-AT------TCA--AGCGG--TCTTCAAGC......................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TC-TCGTCGTGCTT---------------CT-ATTTAC....................................................................2111.00100001000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................TC-TCGTCGTGCTT---------------CT-ATTTACTTCT-------------GT.................................................2711.00100000001000000000
...............................GTATGCAACAATGGCAGTCGCTGA-AC--AG.....................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100010000000000000
............................................................................................................................................................................................................................................................................................................................................................................TTTTGTGATAAGCTC-TCGTCGTGCT.............................................................................................2511.00100000000000001000
.................................................................................................................................................................................................................................................................................................................................................................................................GTGCTT---------------CT-ATTTACTTCT-------------GTTTGTAAAT.........................................2811.00100010000000000000
........................................AATGGCAGTCGCTGA-AC--AGG---ATTTC............................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAATGTTT--------AAA-C--------CAATTGT.........2111.00100001000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATGTTT--------AAA-C--------CAATTGTAT.......2111.00100001000000000000
.....AA-GATTTTATTA---------TACTGTATGCAACAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
......................................ACAATGGCAGTCGCTGA-AC--AGG---ATTTCC------.....................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000000010000
..............................................................................................................................................................................................................................................................................................................................................................................TTGTGATAAGCTC-TCGTCGTG...............................................................................................2111.00100000000000001000
.................................................................................................................................................................................................................TTT-TT------------CCA-------------------------------------------------------------------------------------------TCTTTTATTTTGA.....................................................................................................................................................2111.00100001000000000000
..............................................................................................................................................................TT-CGCTCA---AAGATACCAAAAA---------------------CTAAGTTT-..............................................................................................................................................................................................................................................................................2911.00100000000100000000
...............TTA---------TACTGTATGCAACAATGGCAGT..................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000001000000
................................................................................................................................................GT----GTTTCCGTTT-CGCTCA---AAG......................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
....................................................................TTCC------C-AT------TCA--AGCGG--TCTTCAAGCTAG--.................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
..........................................TGGCAGTCGCTGA-AC--AGG---AT...............................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
....................................................TGA-AC--AGG---ATTTCC------C-AT------TCA--AGCGG--TC.............................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
.........................................ATGGCAGTCGCTGA-AC--AGG---ATTTCC------C-AT------...........................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000000001000
....................................................TGA-AC--AGG---ATTTCC------C-AT------TCA--AGCGG--TCTT...........................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
........................................AATGGCAGTCGCTGA-AC--AGG---ATTTA............................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000000010000
.............................................................................................................................................................................................................................................................................................................................................................................TTTGTGATAAGCTC-TCGTCGTG...............................................................................................2211.00100000000000001000
.............................CTGTATGCAACAATGGCAGTCGCTGA-AC--A......................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100010000000000000
......................................................................................................................................................................................................................................................................................................................................TATTTTGATTT-CC----C--CTTTTGACCAC-CT--T.......................................................................................................................2811.00100000001000000000
.........................................ATGGCAGTCGCTGA-AC--AGG---ATTTCC------C-...................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
..................................................................................................................................................................................................................................................................................................................................................................................GATAAGCTC-TCGTCGTGCTT---------------C............................................................................2111.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................TTTTGTGATAAGCTC-TCGTCGTGCTT---------------.............................................................................2611.00100000000010000000
..............ATTA---------TACTGTATGCAACAATGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00101000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TTTGTGATAAGCTC-TCGTCGG................................................................................................2111.00101000000000000000
...................................................................................................................................................................................................................................CCA-------------------------------------------------------------------------------------------TCTTTTATTTTGATTT-CC----C--........................................................................................................................................2211.00100001000000000000
.......................................CAATGGCAGTCGCTGA-AC--AGG---.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000000000000000
................................................................................................................................................................................................................................................................................................................................................................................GTGATAAGCTC-TCGTCGTGCT.............................................................................................2111.00101000000000000000
..............ATTA---------TACTGTATGCAACAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100010000000000000
....................................................................TTCC------C-AT------TCA--AGCGG--TCTTCAAGCTAA--.................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
..............................................................................C-AT------TCA--AGCGG--TCTTCAAGCTAG--A................................................................................................................................................................................................................................................................................................................................................................................2411.00110000000000000000
...........................................................................................................................................TTTACGT----GTTTCCGTTT-CGC...............................................................................................................................................................................................................................................................................................................................2011.00100001000000000000
......................................................................................................TTCAAGCTAG--AT--C-CCCT----CAGCATT............................................................................................................................................................................................................................................................................................................................................................2411.00100000000001000000
.................A---------TACTGTATGCAACAATGGCAGTCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000001000
....................................CAACAATGGCAGTCGCTGA-AC--.......................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
................................TATGCAACAATGGCAGTCGCTGA-AC--.......................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000010000000000
..............................................................................................................................................................TT-CGCTCA---AAGATACCAAAAA---------------------CTAAGTT................................................................................................................................................................................................................................................................................2811.00100000010000000000
............................................................................................................................................................................................................................................................................................................................................................................TTTTGTGATAAGCTC-TCGTCGTGCA.............................................................................................2511.00100000000000010000
...........................................................................................................................................................................................................................................................................................................................................TGATTT-CC----C--CTTTTGACCAC-C...........................................................................................................................2111.00100001000000000000
........................................................................................................................................................................................................................................................................................................................................................................T--TTTTTGTGATAAGCTC-TCGTCGTGT..............................................................................................2611.00100000000000001000
........GATTTTATTA---------TACTGTATGCAACAAT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000001000000000
..................................TGCAACAATGGCAGTCGCTGA-AC--AGG---ATT..............................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000010000000000
.......................................................................................................................................................................................................................................................................................................................................ATTTTGATTT-CC----C--CTTTTGACCAC-CT--........................................................................................................................2611.00100010000000000000
..............................................................................C-AT------TCA--AGCGG--TCTTCAAGCT.....................................................................................................................................................................................................................................................................................................................................................................................2111.00100001000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................GTGCTT---------------CT-ATTTACTTCT-------------GTT................................................2111.00100001000000000000
.....................................................................................................................................................................................................................................A-------------------------------------------------------------------------------------------TCTTTTATTTTGATTT-CC----C--CTTT....................................................................................................................................2411.00100010000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CT--TTTTTGTGATAAGCTC-TCGTCGT................................................................................................2511.00100000000010000000
...............................................GTCGCTGA-AC--AGG---ATTTCC------.....................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
................................TATGCAACAATGGCAGTCGCTGA-AC--AGG---A................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100000001000000000
.............TATTA---------TACTGTATGCAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100001000000000000
............................................................................................................................................................................................................................................................................................................................................................................................TCGTCGTGCTT---------------CT-ATTTACTTCT-------------GT.................................................2511.00100000000001000000
......................................ACAATGGCAGTCGCTGA-AC--AGG---ATTTAA------.....................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000000001000
..........................................TGGCAGTCGCTGA-AC--AGG---ATTTCC------C-AT------...........................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000001000
...............................................................................................................................................................................................................................................................................................................................................TT-CC----C--CTTTTGACCAC-CT--TTTTTGTGA...............................................................................................................2711.00100000010000000000
............TTATTA---------TACTGTATGCAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100001000000000000
...............................................................................................................................................................................................................................................................................................................................................................................TGTGATAAGCTC-TCGTCGTGCTT---------------CT-..........................................................................2511.00100000010000000000
....................................CAACAATGGCAGTCGCTGA-AC--AGG---ATT..............................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000001000000
.........................................ATGGCAGTCGCTGA-AC--AGG---ATTTCC------C-A..................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000000001000
..........................................TGGCAGTCGCTGA-AC--AGG---ATTTA............................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000000001000
......................................................................................................................................................................................................................................................................................................................................TATTTTGATTT-CC----C--CTTTTGACCAC-C...........................................................................................................................2611.00100000001000000000
...........................TACTGTATGCAACAATGGCAGTCGCTGA-AC--.......................................................................................................................................................................................................................................................................................................................................................................................................................................3011.00100000000000001000
...............................................................................................................................................................T-CGCTCA---AAGATACCAAAAA---------------------CTAAGT.................................................................................................................................................................................................................................................................................2611.00100010000000000000
........................................................................................................................................A--TTTACGT----GTTTCCGTTT-CG................................................................................................................................................................................................................................................................................................................................2011.00100001000000000000
.........................................ATGGCAGTCGCTGA-AC--AG.....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00100100000000000000
dm3
AAACAAA-GATTTTATTA---------TACTGTATGCAACAATGGCAGTCGCTGA-AC--AGG---ATTCCC------C-AT------TCA--AGCGA--TCTTCAAGCTAG--TTT-C-CCCT----CAGCATTTA--TTTACGT----GTTTCCGTTT-CGCTCA---AAGATACCAAAAA---------------------CGAAGTTT-TT------------CCT-------------------------------------------------------------------------------------------TCTTTTATTTTGATTT-CC----C--CTTTTGACCAC-CC---TTTTGTGATAAGCTC-TCGTCGTCCTT---------------CT-ATTTACTTCT-------------GTTTGTAAATGTTT--------AAA-C--------CAATTGTATAAA---ASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
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..................................................................................................................................................................GCTCA---AAGATACCAAAAA---------------------CGAAGT.................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000
................................TATGCAACAATGGCAGTCGCTGA-A..........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................GCATTTA--TTTACGT----GTTTCC.......................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................CCGTTT-CGCTCA---AAGATACCAA...............................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................AC-CC---TTTTGTGATAAGCTC-TCGT...................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000
...................................................................................................................................CATTTA--TTTACGT----GTTTCCGTTT-CG................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...............................................................................................................................................................T-CGCTCA---AAGATACCAAAAA---------------------CGAAGTTT-..............................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................T----GTTTCCGTTT-CGCTCA---AAGATACC.................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................C-AT------TCA--AGCGA--TCTTCAAGCTAG--TTT-C-...........................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TGCAACAATGGCAGTCGCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................TACTTCT-------------GTTTGTAAATGTTT--------AAA-C--------CAAT............2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................C------C-AT------TCA--AGCGA--TCTTCAAGCTAG--TTT-C-...........................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................T-C-CCCT----CAGCATTTA--TTTACGT----GTT..........................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................TGCAACAATGGCAGTCGCTGA-AC--AGG---ATC..............................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................TT-C-CCCT----CAGCATTTA--TTTACGT----GTT..........................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................AAGCTAG--TTT-C-CCCT----CAGCATTTA--TT......................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................CCAC-CC---TTTTGTGATAAGCTC-TCGTCG.................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................GCTCA---AAGATACCAAAAA---------------------CGAA...................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................TCTTCAAGCTAG--TTT-C-CCCT----CAGCATT............................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................CC---TTTTGTGATAAGCTC-TCGTCGT................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................TACGT----GTTTCCGTTT-CGCTCA---AAGAT....................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................CGCTGA-AC--AGG---ATTCCC------C-AT------TCA--AGCGA--...............................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................TACGT----GTTTCCGTTT-CGCTCA---AAGATAC..................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.................................................................................................................................................................................................................................................................................................................................TCTTTTATTTTGATTT-CC----C--CTTTTGACC...............................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................TTTGATTT-CC----C--CTTTTGACCAC-CC---.......................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................AT------TCA--AGCGA--TCTTCAAGCTAG--TTT-C-CCCT----...................................................................................................................................................................................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TATGCAACAATGGCAGTCGCTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................ACAATGGCAGTCGCTGA-AC--AGG---A................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................ACAATGGCAGTCGCTGA-AC--AGG---ATTCC............................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................CTTCAAGCTAG--TTT-C-CCCT----CAGCATT............................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TGTATGCAACAATGGCAGTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................TTGACCAC-CC---TTTTGTGATAAGC..........................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................CTCA---AAGATACCAAAAA---------------------CGAAGTTT-TT------------CC..............................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................TCCGTTT-CGCTCA---AAGATACCA................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................TTTGACCAC-CC---TTTTGTGATAAGCTC-T......................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................C-AT------TCA--AGCGA--TCTTCAAGCTAG--TT...............................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................AG--TTT-C-CCCT----CAGCATTTA--TTTAC...................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
........................................................AC--AGG---ATTCCC------C-AT------TCA--AGCGA--...............................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................A---AAGATACCAAAAA---------------------CGAAGTTT-TT------------CCT-------------------------------------------------------------------------------------------..................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................GTCGCTGA-AC--AGG---ATTCCC------C-AT------TCA--AGC...................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................TTTGTGATAAGCTC-TCGTCG.................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
........................................AATGGCAGTCGCTGA-AC--AGG---A................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................TTTTGATTT-CC----C--CTTTTGACCAC-CC---.......................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................CAACAATGGCAGTCGCTGA-AC--A......................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................TGGCAGTCGCTGA-AC--AGG---ATTCC............................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................ATGGCAGTCGCTGA-AC--AGG---ATT..............................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................T------TCA--AGCGA--TCTTCAAGCTAG--.................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................TT-TT------------CCT-------------------------------------------------------------------------------------------TCTTTTATTTTGATTT-CC----C--C.......................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................TGATAAGCTC-TCGTCGTCCTT---------------CT-AT........................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........................................................................................................AAGCTAG--TTT-C-CCCT----CAGCAAAA...........................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TAAGCTC-TCGTCGTCCTT---------------CT-ATTTAC....................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................C---TTTTGTGATAAGCTC-TCGTCGTCCT.............................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................................TTTACGT----GTTTCCGTTT-CGCTCA---AAGATA...................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................ATGGCAGTCGCTGA-AC--AGG---ATTCCC------.....................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........................................................................................................................T----CAGCATTTA--TTTACGT----GTTTCCGTT....................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.............................................................................................................................................TACGT----GTTTCCGTTT-CGCTCA---AA.......................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................ATGCAACAATGGCAGTCGCTGA-AC--A......................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................TA---------TACTGTATGCAACAATGGCAGTCGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................T-ATTTACTTCT-------------GTTTGTAAATGTT......................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................CGA--TCTTCAAGCTAG--TTT-C-CCCT----CAGC...............................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTAAATGTTT--------AAA-C--------CAATTGTA........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........TTTTATTA---------TACTGTATGCAACAATGGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.AACAAA-GATTTTATTA---------TACTGTATGCAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................GA--TCTTCAAGCTAG--TTT-C-CCCT----CAGCA..............................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............TTATTA---------TACTGTATGCAACAATGGCATC..................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................C------C-AT------TCA--AGCGA--TCTTCAAGCTAG--TTT-.............................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................TAAGCTC-TCGTCGTCCTT---------------CT-ATTTACT...................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..................................................................................................................................................................GCTCA---AAGATACCAAAAA---------------------C......................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................TCTTTTATTTTGATTT-CC----C--CTTTTGAT................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................AC--AGG---ATTCCC------C-AT------TCA--AGC...................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................TTATTTTGATTT-CC----C--CTTTTGACC...............................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................AC-CC---TTTTGTGATAAGCTC-TCGTCGT................................................................................................2611.0010000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CAATGGCAGTCGCTGA-AC--AGG---.................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................CAATGGCAGTCGCTGA-AC--AGG---ATTCCC------C-...................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000
........................................................................................TCA--AGCGA--TCTTCAAGCTAG--.................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................C-CCCT----CAGCATTTA--TTTACGT----GTTTCCGT.....................................................................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
......................................................................CC------C-AT------TCA--AGCGA--TCTTCAAGCTAG--A................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
AAACAAA-GATTTTATTA---------TACTATATGCAAAATCGGCCACTGCTGAACC--TAG---GTTCTGTAACTTT-GT------TCA--AGCAG--TCTTCAAGTTAG--TTT-C--CCT----CAGCATTTA--TTTACGT----ATTTCCGTTT-CGCTCA---AAGATACCAAAAAA--------------------CAAAGTTT-TT------------CCT-------------------------------------------------------------------------------------------TCTTTTG-----ATTT-TGATTCC--CTATTGACAAC-CT-TTTTTTGTGATAAGCTC-TCGTCGTGCTT---------------CT-ATTTACTTCT-------------GTTTGTAAATGTTT--------AAA-C--------CAATTGTATAAA---ASizeHit CountTotal NormTotal
No Reads
droBia1
AAACAAA-GATTTTATTA---------TACTGTACGCAAC-----------------------------------------------------AGCAG--TCTTCAAGTTAG--ATT-C-CCCT----CAGCATTTA--CTTACGT----ATTTTCGTTT-CGCTCA---AAGATACCAAAAA---------------------CCAAGTTTTTT------------CCT-------------------------------------------------------------------------------------------TCTCTTATTTTGATTT-C-----C--CTTTTGACCAC-AT--TTTTTGTGATAAGCTC-TCGTCGTGCTT---------------CT-ATTTACTTCT-------------GTTTGTAAATGTTT--------AAA-C--------CAATTGTATAAA---ASizeHit CountTotal NormTotal
No Reads
droTak1
AAACAAA-GATTTTATTACCT-----GTACTGTATGCAA---------------------TAG---ATTCTC------T-AT------TCA--AGCGG--TCTTCAAGTTAG--ATT-CCCCCT----CAGCATTTA--TTTACGT----ATTTCCGTTT-CGCTCA---AAGATACCAAAAAAA-------------------CAAAGTTT-TT------------CTT-------------------------------------------------------------------------------------------TCTTTTATTTTGATTT-CC----CCCGTTTTGACAACATTTTTTTTTGTGATAAGCTC-TCGTCGTGCTT---------------CT-ATTTACTTCT-------------GTTTGTAAATGTTTAAA-CTTTAAA-C--------CAATTGTATAAA---ASizeHit CountTotal NormTotal
No Reads
droEle1
AAACAAA-GATTTTATTA---------TACTGTATACAATATCGGTAGCTGCTGCAAC--TAG---ATTCTT------C-GT------TCAACAGCAG--TCTTCAAGTTAG--ATT-C-GCCT----CAGCATTTA--TTTACGT----ATTTCCGGTT-CGCTCA---AAGATACCAAAAAA--------------------CTAAGTTT-TT------------CTT-------------------------------------------------------------------------------------------TATTTTCTTTTGATTT-TTCTTC-----CCTGACAAA-CTTTTTTTTGTGATAAGCTC-TCGTCGTGCTT---------------CT-ATTTACTTCT-------------GTTTGTAAATGTTT--------AAA-T--------CCATTGTATAAA---ASizeHit CountTotal NormTotal
No Reads
droRho1
AAACAAA-GATTTTATTA---------TACTGTATACAATATCGGCAGCTGCTAA-AC--TAG---GTTCTT------G-GT------TCG--AGCGG--TATTCAAGTTAG--ATT-C-CCTT----CAGCATTTA--TTTACGT----ATTTCCGTTT-CGCTCA---AAGATACCAAAAA---------------------CAATGTTT-TT------------CTT-------------------------------------------------------------------------------------------TATTTTCTTTTAATTT-GC----C--CCTTTGACAAC-CTTTTTTTTGTGATAAGCTC-TCGTCGTGCTT---------------CT-AATTACTTCT-------------GTTTGTAAATGTTT--------AAA-C--------CAATTGTATAAA---ASizeHit CountTotal NormTotal
No Reads
droFic1
AAACAAA-GATTTTATTA---------CACTGTATGCAACA---GCAGCAGCTGA-ACTATAGATGAT---T------A-GT------TC---GGCAG--TCTTCAAGATAG--ATT-C-CCCT----CAGCATTTA--TTTACGT----ATTTCCGTTT-CGCTCA---AAGATACCAAAAAA--------------------CATAGTTT--T------------CTT-------------------------------------------------------------------------------------------TCATTTATTTTGGTTTGCC----CCCCTTTTGACCAC-CT-TCTTTTGTGATAAGCTC-TCGTCGTGCTTT--------------CT-ATTTACTTCT-------------GTTTGTAAATGTTT--------AAA-C--------CAATTGTATAAA---ASizeHit CountTotal NormTotal
No Reads
droKik1
AAACAAA-GATTTTATTA---------TACTCTACGCAGT---------C---------------------------------------C---GGAAGTTTCCTCAAGTTAT--ATT-C-CCTT----CAGCATTTA--TTTACTC----GTTTCCGTTT-CGCTCAAAAAAGGTACCAAAAAAA---------G---------CAAAGTTT-AA------------TTT-------------------------------------------------------------------------------------------TCTTTTGTTTTGATTT-CT----C--C-TTTGACCCG-CTCTTTTTTGTGATAAGCTC-TCGTCGTGCTT---------------CT-ATTTACTTCT-------------GTTTGTAAATGTT-AAA-CCTTAAA-C--------CAATTGTATAAA---ASizeHit CountTotal NormTotal
No Reads
droAna3
AAACAAA-GATTTTATTA---------AACTGTAT----------------------C--TAG---ATTCAT------TTTT------TTG--AGCAG--ATTTCAAGTTAGTAACTCCCCCTT----CAGCATTTAATTTTACGT----ATTTCCGTTTCCGCTCA---AAGATACCAAAATA---------------------AATGATT--A------------TTTTCTTTTATGATTATTAATTATTATTATTTTTTTTTTTGAGAAA--AAGAAA----------------------------------------------------------C----C--TGTTTGATC---CT-TCTTTTGTGATAAGCTC-TCGTCGTGCTT---------------CT-ATATATTTCC-------------GTTTGTAAATGTTT-------TAAT-C--------CAATTGTATAAA---ASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
..................................................................................................................................................................................................................................................................................................................................................................................GATAAGCTC-TCGTCGTGCT.............................................................................................1913.003000003
.....................................................................................................................................TTTAATTTTACGT----ATTTCCGTTTCCGCT..............................................................................................................................................................................................................................................................................................................................2811.001010000
.....AA-GATTTTATTA---------AACTGTA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001000001
.......................................................................................................TCAAGTTAGTAACTCCCCCTT----C..................................................................................................................................................................................................................................................................................................................................................................2211.001100000
......................................................................AT------TTTT------TTG--AGCAG--ATTTCAAGT......................................................................................................................................................................................................................................................................................................................................................................................2311.001010000
................................................................................................AG--ATTTCAAGTTAGTAACTCCCCCTT----C..................................................................................................................................................................................................................................................................................................................................................................2711.001100000
........................................................................................................................................AATTTTACGT----ATTTCCGTTTCCGCTC.............................................................................................................................................................................................................................................................................................................................2611.001010000
..............................................................................................................................................................TTCCGCTCA---AAGATACCAAAATA---------------------AAT...................................................................................................................................................................................................................................................................................2611.001010000
................................................................................TT------TTG--AGCAG--ATTTCAAGTTAGT..................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
............................................................................................................................................................................................................................................................................................................................................................................TTTTGTGATAAGCTC-TCGTCGTGC..............................................................................................2411.001010000
.....................................................................CAT------TTTT------TTG--AGCAG--ATTTCAAGTTA....................................................................................................................................................................................................................................................................................................................................................................................2611.001000010
.........................................................................................................AAGTTAGTAACTCCCCCTT----CAGC...............................................................................................................................................................................................................................................................................................................................................................2311.001100000
.................................................................................T------TTG--AGCAG--ATTTCAAGTTAGTA.................................................................................................................................................................................................................................................................................................................................................................................2311.001000010
...............................................................................................................................................................................................................................................................................................................................................................................TGTGATAAGCTC-TCGTCGTG...............................................................................................2011.001000001
..................................................................................................................................................................................................................................................................................................................................................................................GATAAGCTC-TCGTCGTGCTT---------------.............................................................................2011.001100000
......................................................................................................................................................................................................................................................................................................................................................................................AGCTC-TCGTCGTGCTT---------------CT-ATA.......................................................................2111.001100000
............................ACTGTAT----------------------C--TAG---ATTCAT------TTTT------TTG--AGC...................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
........................................................................................................CAAGTTAGTAACTCCCCCTT----CAGCA..............................................................................................................................................................................................................................................................................................................................................................2511.001010000
.................................................................................T------TTG--AGCAG--ATTTCAAGTTAGT..................................................................................................................................................................................................................................................................................................................................................................................2211.001000010
droBip1
AAACAAA-GATTTTATTA---------AATTGTATG------------TCGGAGA-AG--TAG---ATTTCA------T-TT------TTT--ATCAG--CCTTCAAGTTAGTAATTTCCTCTT----CAGCATTTA--TTTACGT----AATTCCGTTT-CGCTCA---AAGATACCAAAAAAAATAAACAAAAT----AAAACAAAGTTT-TC------------TTT-----TATGAA------------------TTTTTTTTGAGAAAAAAATAAA----------------------------------------------------------C----C---------CCTT-C--TTTTTTGTGATAAGCTCCTTGTCGTGCTT---------------CT-AT----TTCC-------------GTTTGTAAATGTTT--------AAT-C--------CAATTGTAAAAA---ASizeHit CountTotal NormTotal
No Reads
dp5
AAACAAATGATTTTATTACATATATGGTATTGTAT--------GGCAG------------TAG---ATTCCG------TTTTCCCAACCCA--ACCCC--AACTCAAACCCG--AAC-C-CCTTCAGGCAGCATTTA--CT----------------TTT-CGCTCAA--AAGATACCAAAAAAAA-AA-----GCAAAAACCCCAGAGTTT-TCTTTTAGTTTCCCTTTG-------------------------------TTTT---------------CCCCTCCCTTTTGTGATAGACCTCAAACCC-------------------------------------------------------------TAAGCTC-TTGTCGTGCTTTCGTCTATATATTTC-GTG------TTT-------------CTTTGTAAATGTTTAAATCTTTAAATC--------AAATTGTATAAA---ASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................................TGATAGACCTCAAACCC-------------------------------------------------------------TAAGCTC-TTGAA..................................................................................................2911.0010100000000
..........................................................................................A--ACCCC--AACTCAAACCCG--AA...............................................................................................................................................................................................................................................................................................................................................................................2011.0010010000000
.................................................................................................................................................................CGCTCAA--AAGATACCAAAAAAAA-AA-----GCA..............................................................................................................................................................................................................................................................................................2811.0010100000000
..........................................................................................A--ACCCC--AACTCAAACCCG--AAC-C-C..........................................................................................................................................................................................................................................................................................................................................................................2311.0010010000000
.....................ATATGGTATTGTAT--------GGCAG------------TAG---ATTCC............................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100000000
...............TTACATATATGGTATTGTAT--------GGCAG------------TA.....................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010010000000
.............................................................................................................................................................................................................................................................................................................CCTCAAACCC-------------------------------------------------------------TAAGCTC-TTGTCGTGCTT............................................................................................2811.0010100000000
....................TATATGGTATTGTAT--------GGCAG------------TAG---AT...............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
.................................................................................TCCCAACCCA--ACCCC--AACTCAAACCC....................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.....................ATATGGTATTGTAT--------GGCAG------------TA.....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000100000
............................................................................................................................CAGGCAGCATTTA--CT----------------TTT-CGCTCAA--AAG......................................................................................................................................................................................................................................................................................................................2811.0010010000000
.......................................................................................CCCA--ACCCC--AACTCAAACCCG--AAC-.............................................................................................................................................................................................................................................................................................................................................................................2411.0010100000000
........................................................................................................................................................................................................................................................................TT---------------CCCCTCCCTTTTGTGATAGACCTC..................................................................................................................................................................................2611.0010100000000
...........................................................................................................................................................................................................................................................................................................GACCTCAAACCC-------------------------------------------------------------TAAGCTC-TTGT...................................................................................................2311.0010100000000
......................TATGGTATTGTAT--------GGCAG------------TAG---AT...............................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010100000000
......................TATGGTATTGTAT--------GGCAG------------TAG---ATTCC............................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
.......................ATGGTATTGTAT--------GGCAG------------TAG---ATTCC............................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................AGCTC-TTGTCGTGCTTTCGT........................................................................................2011.0010000001000
......................TATGGTATTGTAT--------GGCAG------------T......................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010010000000
......................................................................................................................................................................................................................................................................................................TGATAGACCTCAAACCC-------------------------------------------------------------TAAGCTC-T......................................................................................................2511.0010100000000
..................................................................................................................................................................................................................................................................................................TTTGTGATAGACCTCAAACCC-------------------------------------------------------------...............................................................................................................2111.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................GCTC-TTGTCGTGCTTTCGTCTATA...................................................................................2411.0010100000000
............................................................................................................CCCG--AAC-C-CCTTCAGGCAGCA..............................................................................................................................................................................................................................................................................................................................................................2111.0010100000000
................................................................................................................................................................................................................................................................................................CTTTTGTGATAGACCTCAAACCC-------------------------------------------------------------TAAGCT.........................................................................................................2911.0010100000000
.....................................................................................................................................................................................................................................................................................................................................................................................AAGCTC-TTGTCGTGCTTTCGTCT......................................................................................2311.0010100000000
..................................................................................................................................................................................................................................................................................................TTTGTGATAGACCTCAAACCC-------------------------------------------------------------TAAGC..........................................................................................................2611.0010100000000
................................................................................................................................................................................................................................................................................................................CAAACCC-------------------------------------------------------------TAAGCTC-TTGTCGTGC..............................................................................................2311.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................GCTC-TTGTCGTGCTTTCGTCTATAT..................................................................................2511.0010000100000
droPer2
AAACAAATGATTTTATTACATATATTGTATTGTAT--------GGCAG------------TAG---ATTCCG------TTTTCCCAACCCA--ACCCC--AACCCCAACTCG--AAC-C-CCTTCAGGCAGCATTTA--CT----------------TTT-CGCTCAA--AAGATACCAAAAAAA---------GCAAAAACCCCAGAGTTT-TCTTTTAGTTTCTCTTTG-------------------------------TTTT---------------CCCCTCCCTTTTGTGATAGACCTCAAACCC-------------------------------------------------------------TAAGCTC-TTGTCGTGCTTTCGTCTATATATTTC-GTG------TTT-------------CTTTGTAAATGTTTAAATCTTTAAATC--------AAATTGTATAAA---ASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
..........................................................................................................................................................................................................................................................................................................................................................................................C-TTGTCGTGCTTTCGTCT......................................................................................1814.004400000
.................................................................................................................................................................................................................................................................................................................................................................................................GTGCTTTCGTCTATATATTTC-GT..........................................................................2314.004400000
................................................................................................................................................................................................................................................................................................................CAAACCC-------------------------------------------------------------TAAGCTC-TTGTCGTGC..............................................................................................2313.003300000
..............................................AG------------TAG---ATTCCG------TTTTCCCAACCCA--ACCC..................................................................................................................................................................................................................................................................................................................................................................................................2812.002200000
.............................................................................................................TCG--AAC-C-CCTTCAGGCAGC...............................................................................................................................................................................................................................................................................................................................................................1911.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................GCTC-TTGTCGTGCTTTCGTCT......................................................................................2111.001100000
.........................................................................................................CAACTCG--AAC-C-CCTTCAGGCAGCATT............................................................................................................................................................................................................................................................................................................................................................2611.001010000
........................................................................................................................................................................................................................................................................................................................................................................................CTC-TTGTCGTGCTTTCGT........................................................................................1811.001001000
......................................................................................................................................TTA--CT----------------TTT-CGCTCAA--AAG......................................................................................................................................................................................................................................................................................................................1811.001100000
....................................................................................................................................ATTTA--CT----------------TTT-CGCTCAA--AAG......................................................................................................................................................................................................................................................................................................................2011.001100000
........................................................................................................................................................................................................................TTTAGTTTCTCTTTG-------------------------------TTTT---------------CCCCTCCCT.................................................................................................................................................................................................2811.001100000
....................TATATTGTATTGTAT--------GGCA....................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.001100000
......................................................................................................................................................................................................................................................................................................................................................................................AGCTC-TTGTCGTGCTTTCGT........................................................................................2011.001001000
..............................................................................................................CG--AAC-C-CCTTCAGGCAGCAT.............................................................................................................................................................................................................................................................................................................................................................2011.001001000
........................................................................................................CCAACTCG--AAC-C-CCTTCAGGCAGC...............................................................................................................................................................................................................................................................................................................................................................2411.001100000
......................................................................................................................................................................................................................................................................................................TGATAGACCTCAAACCC-------------------------------------------------------------T..............................................................................................................1811.001100000
droWil2
CAAA-------TTTAT-------------------------------------------------------------------------------------------CCT-------------------------------------------------------------------------------------------------AGTTT-CATTTTACTTACTTTTTTC--CCATAAA------------------TTGTTT----------------------------------------------------------------------------------------------TT-TTTTTTGTGATAGGCTC-T---CGTGCTT---------------TT-ATTT---TTT-------------CTTTGTAAATGTTT-----TCTAAAAAAAAAAGTATATATGTATAAATTGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..............................................................................................................................................................................................................................................................................................................................................................................TTGTGATAGGCTC-T---CGTGCTT---------------T............................................................................2212.00201100
...........................................................................................................................................................................................................................................................................................................................................................................TTTTTGTGATAGGCTC-T---CGT................................................................................................2012.00220000
.......................................................................................................................................................................................................................................................................................................................................................................TT-TTTTTTGTGATAGGCTC-T---CGT................................................................................................2311.00100100
..................................................................................................................................................................................................................................................................................................................................................................................GATAGGCTC-T---CGTGCTT---------------TT-AT........................................................................2111.00100100
.............................................................................................................................................................................................................................................................................................................................................................................TTTGTGATAGGCTC-T---CGTG...............................................................................................1911.00100100
............................................................................................................................................................................................................................................................................................................................................................................TTTTGTGATAGGCTC-T---CGTG...............................................................................................2011.00100100
...............................................................................................................................................................................................................................................................................................................................................................................TGTGATAGGCTC-T---CGTGC..............................................................................................1811.00100010
..........................................................................................................................................................................................................................................................................................................................................................................TTTTTTGTGATAGGCTC-T---CGTGCT.............................................................................................2411.00100100
.............................................................................................................................................................................................................................................................................................................................................................................TTTGTGATAGGCTC-T---CGTGCT.............................................................................................2111.00100100
droMoj3
TT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT----------------------------------------------------GATTTTCTTTTGTGATAGA-CTCAAATCGAAAGCTCTTG---------------------------------------------------------C-TTTTTATGTTT---------------CTTATTTTTTTTT----TATAAAACCTTTTGTAAATGTTT--------AAA-C--------GAATTGTATAAA---CSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.......................................................................................................................................................................................................................................................................................................GATAGA-CTCAAATCGAAAGCTCTTG---------------------------------------------------------C-T......................................................................................................2711.001001000
...........................................................................................................................................................................................................................................................................................ATTTTCTTTTGTGATAGA-CTCAA................................................................................................................................................................................2311.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAACCTTTTGTAAATGTT......................................2111.001100000
.....................................................................................................................................................................................................................................................................................................GTGATAGA-CTCAAATCGAAAGCTCT....................................................................................................................................................................2511.001000001
..............................................................................................................................................................................................................................................................................................TTCTTTTGTGATAGA-CTCAAATCGAAAG........................................................................................................................................................................2811.001100000
droGri2
-------------------------------------------------------------------------------------------------------------------------------------------------------------TTT-AGCTCA---AAGATACCAAAAAA---------------------AAAACAT-TC------------TTTGC------------------------------TTTT---------------TGATTTCCTTTTGTGATAG-CCTCAAATCGAAAGCTCGTG---------------------------------------C-TTT-------TAA------------GTTCGCGTGCAT-------AT-GTTTT--TTTCTTTGATTAA--CTTTTGTAAATGTTT--------AAA-C--------AAATTGTATAAA---ASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
................................................................................................................................................................................................................................................................................................................................G---------------------------------------C-TTT-------TAA------------GTTCGCGTGCAT-------.............................................................................2011.00110
..............................................................................................................................................................................................................AAACAT-TC------------TTTGC------------------------------TTTT---------------TGATTTCCT.................................................................................................................................................................................................2611.00110
...........................................................................................................................................................................................................................................................................................................G-CCTCAAATCGAAAGCTCGTG---------------------------------------...........................................................................................................................2111.00101

Generated: 05/17/2015 at 10:43 PM