ID:

der_581

 Coordinate:

scaffold_4770:8739987-8740137 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-12.6 -12.0 -11.9

Flybase annnotation

exon [dere_GLEANR_673:2]; CDS [Dere\GG21962-cds]; intron [Dere\GG21962-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
CCCAACGCCGCCATGCCAACGCTCAAAAATGCTGAGACTGAGAGATGCAGGTAAGCCGACTCTTCTATATAGATTTTCGATCCGGCTTACTAATCATCGCCAAATCTTGCAGATTTCGAAGAAGACTCGCAGAACGATGCAAAGTCGGCAGCGCTGAGCACGTGGAGTGCCCAAAGCACCAGCATTTCGAGCTTCTACAAGCCGACTCTCTACGAGTCGGTTACCACTGATGGAAAAGGTGAGTTTTATGC
*****************************************************************************************************************************************......((.((..((..((.((((.....)))).))..)).)).))...........********************************************************* 		Read size # Mismatch Hit Count Total Norm Total M055
female body
 V040
embryo
 V108
head
 V107
male body		 M057
embryo
 V060
head
........................................................................................................................................................................GCCCAAAGCACCAGCATTTCGAGCTT......................................................... 26 0 1 1.00 1 0 0 0 0 0 1
.........................AAAATGCTGAGACTGAGAGA.............................................................................................................................................................................................................. 20 0 1 1.00 1 0 0 1 0 0 0
.......................................................................................................................................GGTGCAAAGTCGGCAGCGCTGAGC............................................................................................ 24 1 1 1.00 1 0 0 0 0 1 0
.........................................................................................................................................TGCAAAGTCGGCAGCGCTGAGCA........................................................................................... 23 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................TCGCAGAACGATGCAAAGTCGG....................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................GTCGGTTACCACTGATGGAAAAGAT........... 25 1 1 1.00 1 0 0 0 1 0 0
.........................................................................................................................................TGCAAAGTCGGCAGCGCTG............................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0
...........................................................................................................TGCAGATTTCGAAGAAGACT............................................................................................................................ 20 0 1 1.00 1 0 1 0 0 0 0
...........................................................................................................................................................................................................................GTTAACACTGATGGAAAAG............. 19 1 1 1.00 1 0 0 1 0 0 0
..................ACGCTCAAAAATGCTGAGACTGAGA................................................................................................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0 0
.....................................................................................................................GAAGAAGACTCGCAGAACGATGCAAA............................................................................................................ 26 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................................................................................TAGCCGAGTCTTTACGAGTCGG............................... 22 3 1 1.00 1 0 0 0 0 0 1
........................................................................................................................GAAGACTCGCAGAACGATG................................................................................................................ 19 0 1 1.00 1 0 0 1 0 0 0
................................................................................................................................................................................CACCAGCATTTCAAGCTTCTACAAGCC................................................ 27 1 1 1.00 1 0 1 0 0 0 0
.........................................................................................................GATGCAGATTTCGAAGAAGACT............................................................................................................................ 22 2 1 1.00 1 0 0 0 1 0 0
................................................................................................................ATTTCGAAGAAGACTCGCAGAA..................................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0
...............................................................................................................................................................ACGTGGAGTGCCCAAAGCACCAGC.................................................................... 24 0 1 1.00 1 0 0 0 0 1 0
.....................................................................................................................................................AGCGCTGAGCACGTGGAG.................................................................................... 18 0 1 1.00 1 0 0 1 0 0 0
...............................................................................................................................................................................................................CTCTACGAGTCGGTTACCACT....................... 21 0 1 1.00 1 0 1 0 0 0 0
.......................CAAAAATGCTGAGACTGAGA................................................................................................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................GATGCAGATTTCGAAGAAGACTCGC......................................................................................................................... 25 2 1 1.00 1 0 0 0 1 0 0
................................................................................................................................................................CGTGGAGTTCCCTAAGCAGCA...................................................................... 21 3 4 0.25 1 0 1 0 0 0 0
..................................................................................................................................................................................................................................CTGATGCAGAAGGTGAGTTC..... 20 3 10 0.10 1 0 0 1 0 0 0

Anti-sense strand reads

GGGTTGCGGCGGTACGGTTGCGAGTTTTTACGACTCTGACTCTCTACGTCCATTCGGCTGAGAAGATATATCTAAAAGCTAGGCCGAATGATTAGTAGCGGTTTAGAACGTCTAAAGCTTCTTCTGAGCGTCTTGCTACGTTTCAGCCGTCGCGACTCGTGCACCTCACGGGTTTCGTGGTCGTAAAGCTCGAAGATGTTCGGCTGAGAGATGCTCAGCCAATGGTGACTACCTTTTCCACTCAAAATACG
*********************************************************......((.((..((..((.((((.....)))).))..)).)).))...........***************************************************************************************************************************************** 		Read size # Mismatch Hit Count Total Norm Total M055
female body
 V060
head
 GSM1528801
follicle cells
...............................................................................................................................................................................CGTGGTCGTAAAGGTCGAA......................................................... 19 1 1 1.00 1 1 0 0
.................................................................................................................................................................................................................................TGACTACACTGTCCACTCAAA..... 21 3 3 0.33 1 0 1 0
.............................................................................................................................................TTCTGCCGTATCGACTCGT........................................................................................... 19 3 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4770:8739937-8740187 - der_581 CCCAACGCCGCCATGCCAACGCTCA---AAAATGCTGAGACTGAGAGATGCAGGTAAGC---CGACTC---TTCTA----TAT----------------AGATTTTC----------------------------------------------------------GATCCGG-CT-TACT-------AA--------------------------TCATC----------GC----CAAATCTTGCAGATTTCGAAGAAG------ACTCGCAGAACGA---TGCAAAGTCGGCAGCGCTGAGCACGTGGAGTGCCCAAAGC---------------------------ACCAGCATTTC------GAGCTTCTACAAGC------------------------------CGACTC---------TCTACGAGTCGGTTACCACTGATGGAAAAGGTGAGTTTT-----ATGC
droYak3 3R:11492799-11493048 - CCCAACGCCGCCATACCAACGCTCA---AAAATGCTGAGACTGAGAGATGCAGGTAAGC---CGGCTC---CCCTA----TAT----------------AGATTTTC----------------------------------------------------------GATCCGATGA-T------TAGTAA--------------------------TC-------------GC----CAAATCTTGCAGATTTCGAAGAAG------ACTCGCAGAACGA---TGCAAAGTCGGCAGCGCTGAGCACGTGGAGTGCCCAAAGC---------------------------ACCAGCATTTC------GAGCTTCTACAAGC------------------------------CGACTC---------TCTACGAGTCGTTTACCACTGATGGAAAAGGTGAGTTTT-----GTGC
droSec2 scaffold_12:1265158-1265412 - CCCAACGCCGCCGTACCAACGCTCA---AAAATGCTGAGACTGAAAGATGCAGGTAAGC---CGGCTC---TTCCA----TAT----------------ACATTTTC----------------------------------------------------------GATCCGGGCG-TACT-------AA--------------------------TCATCCAA-------AC----CAAATCTTGCAGATTTCGAAGAAG------ACTCGCAGAACGA---TGCAAAGTCGGCAGCGCTGAGCACGTGGAGTGCCCAAAGC---------------------------ACCAGCATTTC------GAGCATCTACAAGC------------------------------CGGCTC---------TCTACGAGTCGGTTACCACTGATGGAAAAGGTGAGTTTT-----GTGC
droSim2 3r:8369905-8370159 - dsi_22443 CCCAACGCCGCCGTACCAACGCTCA---AAAATGCTGAGACTGAAAGATGCAGGTAAGC---CGGCTC---TTCCA----TAT----------------ACTTTTTC----------------------------------------------------------GATCCGGGTG-TACT-------AA--------------------------TCAACCAA-------AC----CAAATCTTGCAGATTTCGAAGAAG------ACTCGCAGAACGA---TGCAAAGTCGGCAGCGCTGAGCACGTGGAGTGCCCAAAGC---------------------------ACCAGCATTTC------GAGCATCTACAAGC------------------------------CGGCTC---------TCTACGAGTCGGTTACCACTGATGGAAAAGGTGAGTTTT-----GTGC
dm3 chr3R:12890442-12890696 + CCCAACACCGCCGTACCAACGCTCA---AAAATGCTGAGACTGAAAGATGCAGGTAAGC---CGGCTT---TTCCA----TAT----------------ACATTTTC----------------------------------------------------------GATCCGGGTG-TATT-------AA--------------------------TCAACAAA-------AC----CAAATCTTGCAGATTTCGAAGAAG------ACTCGCAGAACGA---TGCAAAGTCGGCAGCGCTCAGCACGTGGAGTGCCGAAAGC---------------------------ACCAGCATTTC------GAACATCTACAAGC------------------------------CGGCTC---------TCTACGAGTCGGTTACCACTGATGGAAAAGGTGAGTTTT-----GTGC
droEug1 scf7180000409804:330139-330392 + CCAACCGCCGCCATACCAACGCTCA---AAAATGCTGAGACTGAGAGATGCAGGTAAGC---CGGCTC---AACTA----TAT----------------AGTGTTTC----------------------------------------------------------GATCCGGGTA-TACT-------GA--------------------------TCCTT--T-------CC--C-GATATTTTGCAGATTCCGAAGAAG------ACTCGCAGAACGA---TGCAAAGTCGGCGGCGCTAAGCACGTGGAGTACCCAAAGC---------------------------AGCAGCATTTC------GAGCATCTTCAAGC------------------------------CCGCTC---------TCTTCGAGTCGTTCACCACTGATGGAAAAGGTGAGTTTT-----GCAT
droBia1 scf7180000302402:8829438-8829691 - CCAACCGCCGCCGTACCAACGCTCA---AAAATGCAGAGACTGAGAGATGCAGGTTAGTGCTCCGCCC---TGCAT----TAT----------------AGATCTTC----------------------------------------------------------GATCCGGGCT-TACT-------GA--------------------------TTCC-----------CC----CGATTCTTGCAGATTCCGAAGAAG------ACTCGCAGAACGA---TGCAAATTCGGCGGAGCTGAGCACGTGGAGTGCCCAAAGC---------------------------AGCAGCATTTC------GTGCATCTACAAAA------------------------------CGTCTC---------TCCTCGAGTCGTTCACCACTGATGGAAAAGGTGAGTTTG-----CCAC
droTak1 scf7180000415653:294842-295093 + CCAACCGCCGCCATACCAACGCTCA---AAAATGCTGAGACTGAGAGATGCAGGTAAGC---CCCCTC---TACTA----TAT----------------AGAGTTTT----------------------------------------------------------GATCCGGGCA-TACT-------GA--------------------------CCCTC--C-------CC----TGATTCTTACAGATTCCGAAGAAG------ACTCGCAGAACGA---TGCAAATTCGGCGGCGCTGAGCACGTGGAGCGGCCAAAGC---------------------------AGCAGCATTTC------GAGCATCTTCAAGC------------------------------CGCCAC---------TCTTCGAGTCGTTCACCACTGATGGAAAAGGTGAGTTTT-----GCA-
droEle1 scf7180000491278:1863045-1863295 - ACAACCGCCGCCATACCAACGCTCA---AAAATGCTGAGACTGAGAGATGCAGGTAA-C---CGGCTA---TACCA----TAT----------------AGAGTTTC----------------------------------------------------------GATCCAGTGA-TACT-------TA--------------------------TCCTC----------CC----CGATTTTTGCAGATTCCGAAGAAG------ACTCGCAGAACGA---TGCAAAGTCGGCAGCGCTGAGCACGTGGAGTGCGCAGAGC---------------------------AGCAGCATTTC------GAGCATCTTCAAGC------------------------------CGCCTC---------TCTTCGAGTCTTTCACCACTGATGGAAAAGGTGAGTTTT-----ACGC
droRho1 scf7180000779892:23491-23742 - TCAACCGCCGCCATACCAACGCTCA---AAAATGCAGAGACTGAGAGATGCAGGTAAGC---CGGCTC---TGCTA----TAT----------------AGAGTTTC----------------------------------------------------------GATCCGGTGA-TACT-------TA--------------------------CCCTC----------CC----CCATTTTTGCAGATTCCGAAGAAG------ACTCGCAGAACGA---TGCAAAGTCGGCAGCGCTGAGCACGTGGAGTGCGCAGAGC---------------------------AGCAGCATTTC------GAGCATCTTCAAGC------------------------------CGCCTC---------TCTTCGAGTCGTTCACCACTGATGGAAAAGGTGAGTTTT-----GCGC
droFic1 scf7180000452523:350822-351074 + CCAACCGCCGCCATACCAACGCTCA---AAAATGCTGAGACTGAGAGATGCAGGTAAGC---C-ACTC---CCCTA----TAT----------------AGAGTTTC----------------------------------------------------------GATCCGAGGA-TACT-------GA--------------------------CCCAA--A-------AC--T-CAATTCTTGCAGATTCCGAAGAAG------ACTCGCAGAACGA---TGCAAATTCGGCGGCGCTGAGCACGTGGAGTGCGCAGAGC---------------------------AGCAGCATTTC------GAGCACCTTCAAGC------------------------------CGCCTC---------TCTTCGAGTCATTCACCACTGATGGAAATGGTGAGTTTA-----GTGC
droKik1 scf7180000302313:381359-381645 + CCAACCGCCGCCATACCAACGCTCA---AAAATGCAGAGACTGAAAGATGCAGGTAAGTCCA--------TCTCCA----AAT---------TGGGGAGAGCTCTCCAAGCCGA-----------------GCA----GAACGATAAC--TTTAATG-------------------------------------------------------------------------TC----CCATTCTTGCAGATCCCGAAGAAG------ACTTGCAGAACGA---CGCACAGTCGGCGGCGCTGAGCACGTGGAGTGCGCGGAGC---------------------------AGCAGCATTTCGGCGTCGAGCATCTTCAAGAGGACGGAGTCGC-CAACGC-----------CACCGC---------TCTTCGAGTCGTTCACCACTGACGGGAAAGGTGAGTTTC-----CAGT
droAna3 scaffold_13340:7012866-7013123 - C---------------CATCGCTCA---AAAATGCTGAGACTGAAAGATGCAGGTGAGGATA--------AAAAAATAACTAT----------------AATGATTT----------------------------------------------------------TATCCAGACTTTGCT-------GACTCCCCCCCTAC--------------CCCTC--T-------CCTA--CGCTATTTCCAGATTCCGAAGAAG------ACTCGCAGAACGA---TGCAAAGTCGACGGCGCTGAGCACGTGGAG---------C---------------------------CCCAGCATTTC------GAGCATCTTCAAGCGGACGGAGCAGC------------------CTTCGC---------TCTTCGAGTCGTTTACTACTGACGGAAAAGGTGAGTTTC-----CTTC
droBip1 scf7180000396708:1841380-1841658 + C---------------CATCGCTCA---AAAATGCTGAGACTGAAAGATGCAGGTGAGGATA--------CCATTATATCTAT----------------TTAAGTTT----------------------------------------------------------GATCCAGACTTTGCT-------GACATCCCCCTTCCCCCTGGGTTATTGGTTCCC--C---CTCTCCTA--CGATATTTCCAGATTCCGAAGAAG------ACTCACAGAACGA---TGCAAAGTCAACGGCGCTGAGCACGTGGAGC------AGC---------------------------CCCAGCATTTC------GAGCATCTCCAAGCGGGCGGAGCAGC------------------CTTCGC---------TCTTCGAGTCGTTCACTACTGACGGAAAAGGTGAGTTTC-----CTGC
dp5 2:17901837-17902113 + CTCACTTCCGCCATACCAACGTTCCAACAAAATATTGCGACTGAAAGATGCAGGTGAGTACG--------A--------------GT-----AGCAGCGA-----CTTAGTCGA-----------------GAA----TCCCGACAACAATTTAGAGTTTC----GC-------------------------------------------------------------------------CCTTTAAGATTCAGAAGAAGGAGAATACTCCCAAAACGA---CGAAAAGTCAGCAGCG---GCCACGTGGAGCGTACACAGC---------------------------AACAGCTTTTC------GAGCACCATCAAGCAATCGGA------------------ATCGCAGTTTCTTGGCCCAAGTATAGAGTCTTTTACTACTGAAGGAAAAGGTGAGACTT---------
droPer2 scaffold_3:36564-36836 + CTCACTTCCGCCATACCAACGTTCCAACAAAATATTGCGACTGAAAGATGCAGGTGAGTACG--------A--------------GT-----AGCAGCGA-----CTTAGTC------------------------------GACAACAATTTAGAGTTTC----GCCCTG--------------------------------------------------------------------CCCTTTAAGATTCAGACGAAGGAGACTACTCCCAAAACGA---CGAAAAGTCAGCAGCG---GCCACGTGGAGCGTACACAGC---------------------------AACAGCTTTTC------GAGCACCATCAAGCAATCGGA------------------ATCGCAGTTTCTTGGCCCAAGTATAGAGTCTTTTACTACTGAAGGAAAAGGTGAGACTT---------
droWil2 scf2_1100000004943:5941494-5941829 - CGAACCGCCACCATACCACCGCTCA---AAAATGCTCCGATTGAGAGATGCAGGTATGCATA--------TAAACATACATATGTATACATTT------GGAGTGCC------AATGCACCCAAATGATGACCATAGGGAACGTAAAT--TTT------------AATTTGG------------------------------------------------------------------CACTTTGCAGATTCCGAAGAAG------ACTTCCCAAACGT---CGAAAAGTCAATTATA---CCCACATGGATGGCCCCGAGACCCAACAGTGGTCGGAG------CAGTTCCAGCATTTC------AAGCATCATCAAGCAAACCACGCAAACCACCACCACCGAATCCCAGTTGTTCGGCCCAAGTCTGGAATCTTTTACCACTGACGGCAAAGGTGAGTCT----------
droVir3 scaffold_12855:150988-151247 - dvi_3238 CGCACTCCCGCCGTATCATCGATCA---AAAATGTTGAGACTAAGAGATAAAGGTATGTAAA--------T----------------------------GGT-TTTC-TGTCTA-----------------GGG----TACT-----------------------GA----------ACTGATCAGA-----------------------------------GTTC----C-------ACAATCCTAGATACTGAGGAAA------GCTCTCAAAACAA---CGAAAGGCTGTCAGTG---GCAGCGTGGGGCATGCAGGGC---------------------------AACAATA---------------ACATCAAGCAAATGGA------------------ATCGCAGTTGTATGTCCCGAGAATCGAGTCTTTTACCACAGATGGAAAAGGTGAGTTTGTAGCCATGC
droMoj3 scaffold_6540:2184398-2184680 + CGCACCCCCGCCGTATCAGCGATCA---AAAATGCTGAGACTGAGAGATCAAGGTATGTAAA--------TGGTTT----TGG-------------------------TGGCTA-----------------TGG----CAC---------------------------TGGATTG-AACTGATCAGA-----------------------------------A-------AT----CGGCAATTCTAGATACCGAGGAAT------ACATTCAAAACAACAACGAAAGCTCGTCG---ATGACTGCGTGGGCCGTGCAGAGC---------AATAGGAACAACAACAGCAACAGCAA---------CAGCATCATCAAACAATCGGA------------------GTCCCAGTTGTATGTGCCGAGTCTTGAGTCTTTTACCACTGATGGAAAAGGTGAGTTT----------
droGri2 scaffold_14906:13150755-13150945 + CGCACCCCCGCCTTATCAGCGCTCG---AAAATGCTGAGACTCCGAGATACAGGTAGGTTT---TCTTAAT----------------------------------------------------------------------------GAATTTTGTGATTCGCTG---ACTATGA-AACTGAAGAGA-----------------------------------GGTC----C--ACCC--TAATCCCAGATTCCGAGGGAA------ACACTCAAAACAA---CAACGAACAGTCGTCGTCAGCGTCGTGGACCGTACAGAGC---------------------------AACAACA---------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
CCCAACGCCGCCATGCCAACGCTCA---AAAATGCTGAGACTGAGAGATGCAGGTAAGC---CGACTC---TTCTA----TAT----------------AGATTTTC----------------------------------------------------------GATCCGG-CT-TACT-------AA--------------------------TCATC----------GC----CAAATCTTGCAGATTTCGAAGAAG------ACTCGCAGAACGA---TGCAAAGTCGGCAGCGCTGAGCACGTGGAGTGCCCAAAGC---------------------------ACCAGCATTTC------GAGCTTCTACAAGC------------------------------CGACTC---------TCTACGAGTCGGTTACCACTGATGGAAAAGGTGAGTTTT-----ATGCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................................................................................................................................................GCCCAAAGC---------------------------ACCAGCATTTC------GAGCTT.....................................................................................................2611.0010010000
............................AAAATGCTGAGACTGAGAGA.........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000010
..........................................................................................................................................................................................................................................................................................TGCAAAGTCGGCAGCGCTGAGCA........................................................................................................................................................................2311.0011000000
............................................................................................................................................................................................................................................................................TCGCAGAACGA---TGCAAAGTCGG....................................................................................................................................................................................2211.0010001000
..........................................................................................................................................................................................................................................................................................TGCAAAGTCGGCAGCGCTG............................................................................................................................................................................1911.0011000000
...................................................................................................................................................................................................................................................TGCAGATTTCGAAGAAG------ACT............................................................................................................................................................................................................2011.0010001000
..................ACGCTCA---AAAATGCTGAGACTGAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0011000000
.............................................................................................................................................................................................................................................................GAAGAAG------ACTCGCAGAACGA---TGCAAA.........................................................................................................................................................................................2611.0011000000
................................................................................................................................................................................................................................................................GAAG------ACTCGCAGAACGA---TG.............................................................................................................................................................................................1911.0010000010
........................................................................................................................................................................................................................................................ATTTCGAAGAAG------ACTCGCAGAA.....................................................................................................................................................................................................2211.0010000100
................................................................................................................................................................................................................................................................................................................ACGTGGAGTGCCCAAAGC---------------------------ACCAGC......................................................................................................................2411.0010100000
......................................................................................................................................................................................................................................................................................................AGCGCTGAGCACGTGGAG.................................................................................................................................................................1811.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................C---------TCTACGAGTCGGTTACCACT............................2111.0010001000
.......................CA---AAAATGCTGAGACTGAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0011000000
droYak3
CCCAACGCCGCCATACCAACGCTCA---AAAATGCTGAGACTGAGAGATGCAGGTAAGC---CGGCTC---CCCTA----TAT----------------AGATTTTC----------------------------------------------------------GATCCGATGA-T------TAGTAA--------------------------TC-------------GC----CAAATCTTGCAGATTTCGAAGAAG------ACTCGCAGAACGA---TGCAAAGTCGGCAGCGCTGAGCACGTGGAGTGCCCAAAGC---------------------------ACCAGCATTTC------GAGCTTCTACAAGC------------------------------CGACTC---------TCTACGAGTCGTTTACCACTGATGGAAAAGGTGAGTTTT-----GTGCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.......................CA---AAAATGCTGAGACTGAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200000020000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTTACCACTGATGGAAAAGGTGAGTTT..........2911.00100000010000
....................................................................................................................................................................................................................................................GCAGATTTCGAAGAAG------ACTCGC.........................................................................................................................................................................................................2211.00101000000000
.............................................................................................................................................................................................................................................................................CGCAGAACGA---TGCAAAGTCG.....................................................................................................................................................................................2011.00100010000000
................CAACGCTCA---AAAATGCTGAGACTGAGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
.....................................................................................................................................................................................................................................................................................................CAGCGCTGAGCACGTGGAGTGCCC............................................................................................................................................................2411.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTTTACCACTGATGGAAAAG..................2111.00100000010000
......................................................................................................................................................................................................................................................................................A---TGCAAAGTCGGCAGCGCTG............................................................................................................................................................................2011.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................GCTTCTACAAGC------------------------------CGACTC---------T...............................................1911.00100100000000
................................................................................................................................................................................................................................................................................AGAACGA---TGCAAAGTCGGCAGCGCT.............................................................................................................................................................................2511.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................TC---------TCTACGAGTCGTTTACCACTGATGGA......................2811.00100000010000
droSec2
CCCAACGCCGCCGTACCAACGCTCA---AAAATGCTGAGACTGAAAGATGCAGGTAAGC---CGGCTC---TTCCA----TAT----------------ACATTTTC----------------------------------------------------------GATCCGGGCG-TACT-------AA--------------------------TCATCCAA-------AC----CAAATCTTGCAGATTTCGAAGAAG------ACTCGCAGAACGA---TGCAAAGTCGGCAGCGCTGAGCACGTGGAGTGCCCAAAGC---------------------------ACCAGCATTTC------GAGCATCTACAAGC------------------------------CGGCTC---------TCTACGAGTCGGTTACCACTGATGGAAAAGGTGAGTTTT-----GTGCSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................GCTGAGACTGAAAGATGC......................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010010
.................................................................................................................................................................................................................................................CTTGCAGATTTCGAAGAAG------A..............................................................................................................................................................................................................2011.0010001
.........................................TGAAAGATGCAGGTAAGC---CGG........................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
...AACGCCGCCGTACCAACGCTC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000
...........................................................................................................................................................................................................................................................TCGAAGAAG------ACTCGCAGAAC....................................................................................................................................................................................................2020.5010100
................................................................................................................................................................................................................................................................................AGAACGA---TGCAAAGTCGGCAGCGCT.............................................................................................................................................................................2520.5010010
.....................................................................................................................................................................................................................................................................................................CAGCGCTGAGCACGTGGAGTGC..............................................................................................................................................................2220.5010010
...................................................................................................................................................................................................................................................................................................GGCAGCGCTGAGCACGTGG...................................................................................................................................................................1920.5010010
..................................................................................................................................................................................................................................................................................................CGGCAGCGCTGAGCACGTGGA..................................................................................................................................................................2120.5011000
droSim2
CCCAACGCCGCCGTACCAACGCTCA---AAAATGCTGAGACTGAAAGATGCAGGTAAGC---CGGCTC---TTCCA----TAT----------------ACTTTTTC----------------------------------------------------------GATCCGGGTG-TACT-------AA--------------------------TCAACCAA-------AC----CAAATCTTGCAGATTTCGAAGAAG------ACTCGCAGAACGA---TGCAAAGTCGGCAGCGCTGAGCACGTGGAGTGCCCAAAGC---------------------------ACCAGCATTTC------GAGCATCTACAAGC------------------------------CGGCTC---------TCTACGAGTCGGTTACCACTGATGGAAAAGGTGAGTTTT-----GTGCSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
......................TCA---AAAATGCTGAGACTGAAAGATGC......................................................................................................................................................................................................................................................................................................................................................................................................................................2616.00600000020400000000
...................................TGAGACTGAAAGATGCAGGTAAGC---CGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2814.00400000000400000000
......................TCA---AAAATGCTGAGACTGAAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................2214.00400000010300000000
..................................................................................T----------------ACTTTTTC----------------------------------------------------------GATCCGGGTG-TACT-------AA--------------------------TC................................................................................................................................................................................................................................................................2712.00200000000110000000
............................................................................................................................................................................................................................................................CGAAGAAG------ACTCGCAGAACGA---...............................................................................................................................................................................................2112.00201100000000000000
......................TCA---AAAATGCTGAGACTGAAAGATGCAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................2912.00200000010100000000
...................................TGAGACTGAAAGATGCAGGTAAGC---C..........................................................................................................................................................................................................................................................................................................................................................................................................................2512.00200000000200000000
..........................................................................................................................................................................................................................................................TTCGAAGAAG------ACTCGCAGAACGA---TGC............................................................................................................................................................................................2612.00200000000200000000
......................................................................................................TTTTC----------------------------------------------------------GATCCGGGTG-TACT-------AA--------------------------TCAACC............................................................................................................................................................................................................................................................2712.00200000020000000000
..........................................................................................................................................................................................................................................................TTCGAAGAAG------ACTCGCAGAACGA---TGCAA..........................................................................................................................................................................................2811.00100000000100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................C---------TCTACGAGTCGGTTACCACTG...........................2211.00100010000000000000
..........................................................................................................................................................................................................................................................................ACTCGCAGAACGA---TGCAAAGTC......................................................................................................................................................................................2211.00100010000000000000
......................................................TAAGC---CGGCTC---TTCCA----TAT----------------ACTTTTTC----------------------------------------------------------....................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................C---------TCTACGAGTCGGTTACC...............................1811.00101000000000000000
....................................................................................................CTTTTTC----------------------------------------------------------GATCCGGGTG-TACT-------AA--------------------------TCAAC.............................................................................................................................................................................................................................................................2811.00100000000100000000
........................................................................................................TTC----------------------------------------------------------GATCCGGGTG-TACT-------AA--------------------------TCAACC............................................................................................................................................................................................................................................................2511.00100000010000000000
.....................................................................................................................................................................................................................................................CAGATTTCGAAGAAG------ACTCGCAGAA.....................................................................................................................................................................................................2511.00100000000100000000
..................................................................................T----------------ACTTTTTC----------------------------------------------------------GATCCGGGTG-TACT-------AA--------------------------TCAAC.............................................................................................................................................................................................................................................................3011.00100000000100000000
...................................................................................................................................................................................................................................................TGCAGATTTCGAAGAAG------ACTCGCAGAACG...................................................................................................................................................................................................2911.00100000000100000000
............................AAAATGCTGAGACTGAAAGATGCAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
........................A---AAAATGCTGAGACTGAAAGATGC......................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00100000000100000000
.......................................................................................................................................................................................................................................................GATTTCGAAGAAG------ACTCGCAGAACGA---T..............................................................................................................................................................................................2711.00100000010000000000
.....................................................................................................................................................................................................................................................................................GA---TGCAAAGTCGGCAGCGCTT............................................................................................................................................................................2111.00100000000000001000
...............................ATGCTGAGACTGAAAGATGC......................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100100000000000000
.......................CA---AAAATGCTGAGACTGAAAGATGCAGG...................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000000100000000
................................TGCTGAGACTGAAAGATGCAGGTAAGC---CGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................3111.00100000010000000000
................................................................................................................................................................................................................................................................................AGAACGA---TGCAAAGTCGGCAGCGCT.............................................................................................................................................................................2511.00100000010000000000
......................TCA---AAAATGCTGAGACTGAAAGATG.......................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00100000000100000000
.....................................................................................................TTTTTC----------------------------------------------------------GATCCGGGTG-TACT-------AA--------------------------TCA...............................................................................................................................................................................................................................................................2511.00100000010000000000
..........................................................................................................................................................................................................................................................TTCGAAGAAG------ACTCGCAGAACGA---TGCAAAG........................................................................................................................................................................................3011.00100000010000000000
......................TCA---AAAATGCTGAGACTGAAAGATGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00100000010000000000
..................................................................................T----------------ACTTTTTC----------------------------------------------------------GATCCGGGTG-TA.......................................................................................................................................................................................................................................................................................................2111.00100000010000000000
...........................................................................................................................................................................................................................................................TCGAAGAAG------ACTCGCAGAAC....................................................................................................................................................................................................2011.00101000000000000000
............................................................................................................................................................................................................................................................................TCGCAGAACGA---TGCAAAGTCGGCAGC................................................................................................................................................................................2611.00100000000100000000
................................TGCTGAGACTGAAAGATGCAGGT..................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100000000100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TACGAGTCGGTTACCACTGATGGAAAAGG.................2911.00100000010000000000
...................................TGAGACTGAAAGATGCAGGTAAGC---CG.........................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000100000000
................................TGCTGAGACTGAAAGATGCAGGTAAGC---...........................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000000100000000
.....................................................................................................TTTTTC----------------------------------------------------------GATCCGGGTG-TAC......................................................................................................................................................................................................................................................................................................1911.00100100000000000000
.........................................................................................................................................................................................................................................................TTTCGAAGAAG------ACTCGCAGAACGA---TGC............................................................................................................................................................................................2711.00100000010000000000
....................................GAGACTGAAAGATGCAGGTAAGC---CGGC.......................................................................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000000000
dm3
CCCAACACCGCCGTACCAACGCTCA---AAAATGCTGAGACTGAAAGATGCAGGTAAGC---CGGCTT---TTCCA----TAT----------------ACATTTTC----------------------------------------------------------GATCCGGGTG-TATT-------AA--------------------------TCAACAAA-------AC----CAAATCTTGCAGATTTCGAAGAAG------ACTCGCAGAACGA---TGCAAAGTCGGCAGCGCTCAGCACGTGGAGTGCCGAAAGC---------------------------ACCAGCATTTC------GAACATCTACAAGC------------------------------CGGCTC---------TCTACGAGTCGGTTACCACTGATGGAAAAGGTGAGTTTT-----GTGCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................................................................................................................................................................................................TTC------GAACATCTACAAGC------------------------------CGGC...........................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................GA---TGCAAAGTCGGCAGCGCTCAGC.........................................................................................................................................................................2413.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................TGCAGATTTCGAAGAAG------ACTCGCAGAAC....................................................................................................................................................................................................2812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................TTTCGAAGAAG------ACTCGCAGAACGA---TGC............................................................................................................................................................................................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TCGGCAGCGCTCAGCACGTGGAGTGCCGA...........................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................AA-------AC----CAAATCTTGCAGAT...............................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................TCGAAGAAG------ACTCGCAGAA.....................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CCGCCGTACCAACGCTCA---AAAATGCTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................GCTCAGCACGTGGAGTGCCGAAAGC---------------------------A...........................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................TTCGAAGAAG------ACTCGCAGAACGA---TGCA...........................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................ACATTTTC----------------------------------------------------------GATCCGGGTG-TA.......................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................GAAG------ACTCGCAGAACGA---TGCAAAGTCGGC...................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................GAAG------ACTCGCAGAACGA---TGCAAAGTCG.....................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................CAGCACGTGGAGTGCCGAAAGC---------------------------ACC.........................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGTTACCACTGATGGAAAAGA.................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................TGGAGTGCCGAAAGC---------------------------ACCAGCATTTC------GA.........................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTACCACTGATGGAAAA...................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGATGGAAAAGGTGAGTTTT-----....2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
..............................................................................................................................................................................................................................A-------AC----CAAATCTTGCAGATTTCG...........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................TCGAAGAAG------ACTCGCAGA......................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................TGCTGAGACTGAAAGATGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................C------GAACATCTACAAGC------------------------------CGGCT..........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................CTGAGACTGAAAGATGCAGGC..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................GCAGAACGA---TGCAAAGTCG.....................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
..........................................................................................................................................................................................................................................................................ACTCGCAGAACGA---TGCAAAGTCGGCAG.................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCACTGATGGAAAAG..................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................ACTCGCAGAACGA---TGCAAAGTCGGC...................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TACGAGTCGGTTACCACTGATGGAAAAGA.................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................TCGAAGAAG------ACTCGCAGAACGA---...............................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................CGCTCA---AAAATGCTGAGACTGAA............................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................CGCAGAACGA---TGCAAAGTCGG....................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGAGTCGGTTACCACT............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................TTTC------GAACATCTACAAGC------------------------------CGG............................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................AGAACGA---TGCAAAGTCGGCAGCGCTC............................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACCACTGATGGAAAAG..................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................TC------GAACATCTACAAGC------------------------------CGGC...........................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..........................................................................................................................................................................................................................................................................................TGCAAAGTCGGCAGCGCTCAG..........................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
...................................................................................................................................................................................................................................................TGCAGATTTCGAAGAAG------ACTCGCAGAA.....................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................GA---TGCAAAGTCGGCAGCGCTCA...........................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000
..........................................................................................................................................................................................................................................................TTCGAAGAAG------ACTCGCAGAACGA---TGC............................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................GCATTTC------GAACATCTACA................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................TGCAGATTTCGAAGAAG------ACTCGCAG.......................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................AGTCGGCAGCGCTCAGCACGTGGAGTGCCGAA..........................................................................................................................................................3211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................CTACGAGTCGGTTACCACTGATGGAAA....................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................AGATTTCGAAGAAG------ACTCGCAGAAC....................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................AGCGCTCAGCACGTGGAGT................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................GAAAGC---------------------------ACCAGCATTTC------GAA........................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........CCGTACCAACGCTCA---AATCC........................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
droEug1
CCAACCGCCGCCATACCAACGCTCA---AAAATGCTGAGACTGAGAGATGCAGGTAAGC---CGGCTC---AACTA----TAT----------------AGTGTTTC----------------------------------------------------------GATCCGGGTA-TACT-------GA--------------------------TCCTT--T-------CC--C-GATATTTTGCAGATTCCGAAGAAG------ACTCGCAGAACGA---TGCAAAGTCGGCGGCGCTAAGCACGTGGAGTACCCAAAGC---------------------------AGCAGCATTTC------GAGCATCTTCAAGC------------------------------CCGCTC---------TCTTCGAGTCGTTCACCACTGATGGAAAAGGTGAGTTTT-----GCATSizeHit CountTotal NormTotal
No Reads
droBia1
CCAACCGCCGCCGTACCAACGCTCA---AAAATGCAGAGACTGAGAGATGCAGGTTAGTGCTCCGCCC---TGCAT----TAT----------------AGATCTTC----------------------------------------------------------GATCCGGGCT-TACT-------GA--------------------------TTCC-----------CC----CGATTCTTGCAGATTCCGAAGAAG------ACTCGCAGAACGA---TGCAAATTCGGCGGAGCTGAGCACGTGGAGTGCCCAAAGC---------------------------AGCAGCATTTC------GTGCATCTACAAAA------------------------------CGTCTC---------TCCTCGAGTCGTTCACCACTGATGGAAAAGGTGAGTTTG-----CCACSizeHit CountTotal NormTotal
No Reads
droTak1
CCAACCGCCGCCATACCAACGCTCA---AAAATGCTGAGACTGAGAGATGCAGGTAAGC---CCCCTC---TACTA----TAT----------------AGAGTTTT----------------------------------------------------------GATCCGGGCA-TACT-------GA--------------------------CCCTC--C-------CC----TGATTCTTACAGATTCCGAAGAAG------ACTCGCAGAACGA---TGCAAATTCGGCGGCGCTGAGCACGTGGAGCGGCCAAAGC---------------------------AGCAGCATTTC------GAGCATCTTCAAGC------------------------------CGCCAC---------TCTTCGAGTCGTTCACCACTGATGGAAAAGGTGAGTTTT-----GCA-SizeHit CountTotal NormTotal
No Reads
droEle1
ACAACCGCCGCCATACCAACGCTCA---AAAATGCTGAGACTGAGAGATGCAGGTAA-C---CGGCTA---TACCA----TAT----------------AGAGTTTC----------------------------------------------------------GATCCAGTGA-TACT-------TA--------------------------TCCTC----------CC----CGATTTTTGCAGATTCCGAAGAAG------ACTCGCAGAACGA---TGCAAAGTCGGCAGCGCTGAGCACGTGGAGTGCGCAGAGC---------------------------AGCAGCATTTC------GAGCATCTTCAAGC------------------------------CGCCTC---------TCTTCGAGTCTTTCACCACTGATGGAAAAGGTGAGTTTT-----ACGCSizeHit CountTotal NormTotal
No Reads
droRho1
TCAACCGCCGCCATACCAACGCTCA---AAAATGCAGAGACTGAGAGATGCAGGTAAGC---CGGCTC---TGCTA----TAT----------------AGAGTTTC----------------------------------------------------------GATCCGGTGA-TACT-------TA--------------------------CCCTC----------CC----CCATTTTTGCAGATTCCGAAGAAG------ACTCGCAGAACGA---TGCAAAGTCGGCAGCGCTGAGCACGTGGAGTGCGCAGAGC---------------------------AGCAGCATTTC------GAGCATCTTCAAGC------------------------------CGCCTC---------TCTTCGAGTCGTTCACCACTGATGGAAAAGGTGAGTTTT-----GCGCSizeHit CountTotal NormTotal
No Reads
droFic1
CCAACCGCCGCCATACCAACGCTCA---AAAATGCTGAGACTGAGAGATGCAGGTAAGC---C-ACTC---CCCTA----TAT----------------AGAGTTTC----------------------------------------------------------GATCCGAGGA-TACT-------GA--------------------------CCCAA--A-------AC--T-CAATTCTTGCAGATTCCGAAGAAG------ACTCGCAGAACGA---TGCAAATTCGGCGGCGCTGAGCACGTGGAGTGCGCAGAGC---------------------------AGCAGCATTTC------GAGCACCTTCAAGC------------------------------CGCCTC---------TCTTCGAGTCATTCACCACTGATGGAAATGGTGAGTTTA-----GTGCSizeHit CountTotal NormTotal
No Reads
droKik1
CCAACCGCCGCCATACCAACGCTCA---AAAATGCAGAGACTGAAAGATGCAGGTAAGTCCA--------TCTCCA----AAT---------TGGGGAGAGCTCTCCAAGCCGA-----------------GCA----GAACGATAAC--TTTAATG-------------------------------------------------------------------------TC----CCATTCTTGCAGATCCCGAAGAAG------ACTTGCAGAACGA---CGCACAGTCGGCGGCGCTGAGCACGTGGAGTGCGCGGAGC---------------------------AGCAGCATTTCGGCGTCGAGCATCTTCAAGAGGACGGAGTCGC-CAACGC-----------CACCGC---------TCTTCGAGTCGTTCACCACTGACGGGAAAGGTGAGTTTC-----CAGTSizeHit CountTotal NormTotal
No Reads
droAna3
C---------------CATCGCTCA---AAAATGCTGAGACTGAAAGATGCAGGTGAGGATA--------AAAAAATAACTAT----------------AATGATTT----------------------------------------------------------TATCCAGACTTTGCT-------GACTCCCCCCCTAC--------------CCCTC--T-------CCTA--CGCTATTTCCAGATTCCGAAGAAG------ACTCGCAGAACGA---TGCAAAGTCGACGGCGCTGAGCACGTGGAG---------C---------------------------CCCAGCATTTC------GAGCATCTTCAAGCGGACGGAGCAGC------------------CTTCGC---------TCTTCGAGTCGTTTACTACTGACGGAAAAGGTGAGTTTC-----CTTCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...................................................................................................................................................................................................................................................................................................GACGGCGCTGAGCACGTGG...................................................................................................................................................................1912.002200000
.................................GCTGAGACTGAAAGATGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................2012.002000002
................................................................................................................................................................................................................................................................................................GTCGACGGCGCTGAGCACGTGGA..................................................................................................................................................................2311.001000001
................................................................................................................................................................................................................................................................................................GTCGACGGCGCTGAGCACGTGG...................................................................................................................................................................2211.001000100
...............................................................................................................................................................................................................................................................................................AGTCGACGGCGCTGAGCACGTGGAG---------C---------------------------C...........................................................................................................................2711.001100000
....................................................................................................................................................................................................................................................................................................................................................................................CTTCAAGCGGACGGAGCAGC------------------CTT............................................................2311.001000001
...........................................................................................................................................................................................................................................................................................................TGAGCACGTGGAG---------C---------------------------CCCAGC......................................................................................................................2011.001100000
...........................................................................................................................................................................................................................................................................................................TGAGCACGTGGAG---------C---------------------------CCCAGCAT....................................................................................................................2211.001010000
...........................................................................................................................................................................................................................................................................CTCGCAGAACGA---TGCAAAGTC......................................................................................................................................................................................2111.001000001
.......................................................................................................................................................................................................................................................................................................................................................................C------GAGCATCTTCAAGCGGACGGAGCAGC------------------...............................................................2711.001000001
.......................................................................................................................................................................................................................................................................................................GCGCTGAGCACGTGGAG---------C---------------------------CCCAGCA.....................................................................................................................2511.001000001
......................................................................................................................................................................................................................................................................................................................................................................................................GC------------------CTTCGC---------TCTTCGAGTCGTT...................................2111.001000010
.........................................................................................................................................................................................................................................................................................................GCTGAGCACGTGGAG---------C---------------------------CCCAG.......................................................................................................................2111.001000001
...............................................................................................................................................................................................................................................................................................................................................................................AGCATCTTCAAGCGGACGGAG.....................................................................................2111.001100000
...................................................................................................................................................................................................................................................................................................................................................................................TCTTCAAGCGGACGGAGC....................................................................................1811.001000001
droBip1
C---------------CATCGCTCA---AAAATGCTGAGACTGAAAGATGCAGGTGAGGATA--------CCATTATATCTAT----------------TTAAGTTT----------------------------------------------------------GATCCAGACTTTGCT-------GACATCCCCCTTCCCCCTGGGTTATTGGTTCCC--C---CTCTCCTA--CGATATTTCCAGATTCCGAAGAAG------ACTCACAGAACGA---TGCAAAGTCAACGGCGCTGAGCACGTGGAGC------AGC---------------------------CCCAGCATTTC------GAGCATCTCCAAGCGGGCGGAGCAGC------------------CTTCGC---------TCTTCGAGTCGTTCACTACTGACGGAAAAGGTGAGTTTC-----CTGCSizeHit CountTotal NormTotal
No Reads
dp5
CTCACTTCCGCCATACCAACGTTCCAACAAAATATTGCGACTGAAAGATGCAGGTGAGTACG--------A--------------GT-----AGCAGCGA-----CTTAGTCGA-----------------GAA----TCCCGACAACAATTTAGAGTTTC----GC-------------------------------------------------------------------------CCTTTAAGATTCAGAAGAAGGAGAATACTCCCAAAACGA---CGAAAAGTCAGCAGCG---GCCACGTGGAGCGTACACAGC---------------------------AACAGCTTTTC------GAGCACCATCAAGCAATCGGA------------------ATCGCAGTTTCTTGGCCCAAGTATAGAGTCTTTTACTACTGAAGGAAAAGGTGAGACTT---------SizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................TGCAGGTGAGTACG--------A--------------GT-----AGCAGCGA-----C...............................................................................................................................................................................................................................................................................................................................................................................2611.0010100000000
................................................................................................................................................CAACAATTTAGAGTTTC----GC-------------------------------------------------------------------------CC.......................................................................................................................................................................................................................................2111.0010100000000
....................................................................................................................................................................................................................................................................................................................................................................................CATCAAGCAATCGGA------------------ATCGC...............................................................2011.0010100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTACTGAAGGAAAAGAG................1911.0010000000010
...............................................................................................................................................................................................................................................................................................AGTCAGCAGCG---GCCACGTGGAGCGT..............................................................................................................................................................2511.0010100000000
..................................................................................................................................................................................................................................................................................................................GTGGAGCGTACACAGC---------------------------AACAGCTT....................................................................................................................2411.0010100000000
droPer2
CTCACTTCCGCCATACCAACGTTCCAACAAAATATTGCGACTGAAAGATGCAGGTGAGTACG--------A--------------GT-----AGCAGCGA-----CTTAGTC------------------------------GACAACAATTTAGAGTTTC----GCCCTG--------------------------------------------------------------------CCCTTTAAGATTCAGACGAAGGAGACTACTCCCAAAACGA---CGAAAAGTCAGCAGCG---GCCACGTGGAGCGTACACAGC---------------------------AACAGCTTTTC------GAGCACCATCAAGCAATCGGA------------------ATCGCAGTTTCTTGGCCCAAGTATAGAGTCTTTTACTACTGAAGGAAAAGGTGAGACTT---------SizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
................................................................................................................................................................................................................................................................................................GTCAGCAGCG---GCCACGTGGA..................................................................................................................................................................2011.001001000
.............................................................................................................................................................................................................................................................................................................................ACAGC---------------------------AACAGCTTTTC------GAGCACC....................................................................................................2311.001000010
droWil2
CGAACCGCCACCATACCACCGCTCA---AAAATGCTCCGATTGAGAGATGCAGGTATGCATA--------TAAACATACATATGTATACATTT------GGAGTGCC------AATGCACCCAAATGATGACCATAGGGAACGTAAAT--TTT------------AATTTGG------------------------------------------------------------------CACTTTGCAGATTCCGAAGAAG------ACTTCCCAAACGT---CGAAAAGTCAATTATA---CCCACATGGATGGCCCCGAGACCCAACAGTGGTCGGAG------CAGTTCCAGCATTTC------AAGCATCATCAAGCAAACCACGCAAACCACCACCACCGAATCCCAGTTGTTCGGCCCAAGTCTGGAATCTTTTACCACTGACGGCAAAGGTGAGTCT----------SizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..........................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGTTCGGCCCAAGTC.............................................1812.00220000
..............................................................................................................................................................................................................................................................................................AAGTCAATTATA---CCCACATGG...................................................................................................................................................................2111.00101000
.....................................................................................................................................................................................................................................................................................................................................................................................................................ATCCCAGTTGTTCGGCCCAAGT..............................................2211.00100010
...................................TCCGATTGAGAGATGCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.00110000
............................................................................................................................................................................................................................................................................................................................................................TTCCAGCATTTC------AAGCATCATCA................................................................................................2311.00100100
......................................................................................................................................................................................................................................................................................................TATA---CCCACATGGATGGCC.............................................................................................................................................................1911.00100010
......................................................................................................................................................................................................................................................................................................................................................................................................................TCCCAGTTGTTCGGCCCAAGTC.............................................2211.00101000
.......................................................................................................................................................................................................................................................................................................ATA---CCCACATGGATGGCCCCGAGA.......................................................................................................................................................2411.00100100
................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTTTACCACTGACGGCAA....................2111.00101000
droVir3
CGCACTCCCGCCGTATCATCGATCA---AAAATGTTGAGACTAAGAGATAAAGGTATGTAAA--------T----------------------------GGT-TTTC-TGTCTA-----------------GGG----TACT-----------------------GA----------ACTGATCAGA-----------------------------------GTTC----C-------ACAATCCTAGATACTGAGGAAA------GCTCTCAAAACAA---CGAAAGGCTGTCAGTG---GCAGCGTGGGGCATGCAGGGC---------------------------AACAATA---------------ACATCAAGCAAATGGA------------------ATCGCAGTTGTATGTCCCGAGAATCGAGTCTTTTACCACAGATGGAAAAGGTGAGTTTGTAGCCATGCSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................................................................................................................................AGCGTGGGGCATGCAGGGC---------------------------............................................................................................................................1912.002000100000000000000000010000000000000000000000000000000000000000
...................................TGAGACTAAGAGATAAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000100000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................GTATGTCCCGAGAATCGAGT.......................................2011.001000000000000000000100000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTACCACAGATGGAAAAG..................1911.001000000010000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................CTCTCAAAACAA---CGAAAGGCT......................................................................................................................................................................................2111.001010000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................ACATCAAGCAAATGGA------------------AT..................................................................1811.001000000000000000001000000000000000000000000000000000000000000000
.........GCCGTATCATCGATCA---AAAATGTTGA...................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................TGTCTA-----------------GGG----TACT-----------------------GA----------ACTGATCAGA-----------------------------------GTTC----C-------...........................................................................................................................................................................................................................................3011.001000000000000000000000000000000000000000000000000100000000000000
......................................................................T----------------------------GGT-TTTC-TGTCTA-----------------GGG----TACT-----------------------GA----------ACT.....................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000000000000001000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTCTTTTACCACAGATGGAAAAG..................2511.001000000000000000000100000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................CACAGATGGAAAAGGTGAG.............1911.001000000010000000000000000000000000000000000000000000000000000000
............GTATCATCGATCA---AAAATGTTGAGA.................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................AATA---------------ACATCAAGCAAATGGA------------------ATCGCAG.............................................................2711.001000000000000001000000000000000000000000000000000000000000000000
....................................GAGACTAAGAGATAAAGA...................................................................................................................................................................................................................................................................................................................................................................................................................................1830.331000000000000001000000000000000000000000000000000000000000000000
droMoj3
CGCACCCCCGCCGTATCAGCGATCA---AAAATGCTGAGACTGAGAGATCAAGGTATGTAAA--------TGGTTT----TGG-------------------------TGGCTA-----------------TGG----CAC---------------------------TGGATTG-AACTGATCAGA-----------------------------------A-------AT----CGGCAATTCTAGATACCGAGGAAT------ACATTCAAAACAACAACGAAAGCTCGTCG---ATGACTGCGTGGGCCGTGCAGAGC---------AATAGGAACAACAACAGCAACAGCAA---------CAGCATCATCAAACAATCGGA------------------GTCCCAGTTGTATGTGCCGAGTCTTGAGTCTTTTACCACTGATGGAAAAGGTGAGTTT----------SizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
....................................................................................................................................................................................................................................................................................................................GGGCCGTGCAGAGC---------AATAG.........................................................................................................................................1911.001001000
.................................................................................................................................................................................ACTGATCAGA-----------------------------------A-------AT----CGGCAATTC....................................................................................................................................................................................................................................2211.001000010
................................................................................................................................................................................................................................................................................................................................................................................GCATCATCAAACAATCGGA------------------GTCCCAGC............................................................2711.001000010
.......................................................................................................................................................................................................................................................................................................................................................................................CAAACAATCGGA------------------GTCCCAGT............................................................2011.001000001
...............................................................................................................................................................................................................................................................................................................TGCGTGGGCCGTGCAGAGC---------..............................................................................................................................................1911.001000010
......................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAGCAA---------CAGCATC....................................................................................................22200.051000010
...................................................................................................................................................................................................................................................................................................................................................CAACAACAGCAACAGCAA---------CAG........................................................................................................21200.051100000
.................................................................................................................................................................................................................................................................................................................................................AACAACAACAGCAACAGCA.....................................................................................................................19200.051010000
droGri2
CGCACCCCCGCCTTATCAGCGCTCG---AAAATGCTGAGACTCCGAGATACAGGTAGGTTT---TCTTAAT----------------------------------------------------------------------------GAATTTTGTGATTCGCTG---ACTATGA-AACTGAAGAGA-----------------------------------GGTC----C--ACCC--TAATCCCAGATTCCGAGGGAA------ACACTCAAAACAA---CAACGAACAGTCGTCGTCAGCGTCGTGGACCGTACAGAGC---------------------------AACAACA---------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 10:33 PM