ID:

der_576

 Coordinate:

scaffold_4770:8197815-8198098 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dere\GG22340-cds]; exon [dere_GLEANR_708:3]; exon [dere_GLEANR_708:2]; CDS [Dere\GG22340-cds]; intron [Dere\GG22340-in]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CGCTGTCCATGCAGGGAGGATTCATGGACTCCTTGGCATTTGCCACAGAGGTAAATATATAAAAAGTTACATCGACATGATCATCAATTGATATCACTATCACACATTTAACAAAAATAGCGTAGCTTGTTCTGAAGAAAATTTTGTTTATTTCTTGTTGTTAGCATAACCCAAATTCTAAACTTGTCTTCTGGTATTCAACTGTATGTTTTATGTACTTTCACAATAGCAGAATTTTTGTTTAAAATAGCAATTGATTTTGAAAAAAAAAATGTTTTTTCAAGCAGTAGATATAGATGATACTACCTCACGTTCCTTTGTATTTTTATTCCAGCATCCTAAGTTCGTGTTTGATATGGTTGTGATCTCCGTTTGCTCAGCGGT
**************************************************(((((.((((((((((((((.......((((.(((....)))))))((((................)))).)))))))......((((((..........))))))(((((((....(((..(((((((....((((.....(((((..(((.....)))....)))))...))))....)))))))..))).....)))))))....((((((((((......))))))))))..((((.(((.....)))))))..........))))))).))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M055
female body
 V040
embryo
 V107
male body		 V060
head
 V108
head
 M057
embryo
...............................................................................................................................................................................................................................................................................................................................................ATCCTAAGTTCGTGTTTGATA............................ 21 0 1 1.00 1 0 0 1 0 0 0
..........................................................................................................................................................................................TCTTCTGGTATCATACTGTAT................................................................................................................................................................................. 21 3 1 1.00 1 0 0 0 1 0 0
....GTCCATGCAGGGAGGATTCATGGACT.................................................................................................................................................................................................................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................................................TGATATGGTTGTGATCTCCGTTTGCTC...... 27 0 1 1.00 1 1 0 0 0 0 0
...............GAGGATTCATGGACTCCTTGGC........................................................................................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................................CCTAAGTTCGTGTTTGATATGGTTGTG.................... 27 0 1 1.00 1 1 0 0 0 0 0
..........................................................................................................................................................................................TCTTCTGGTATATTACTGTATG................................................................................................................................................................................ 22 3 2 0.50 1 0 1 0 0 0 0
..........................................................................................................................................................................................TCTTCTGTTATACAACTGTATC................................................................................................................................................................................ 22 3 2 0.50 1 0 1 0 0 0 0
................................................................................................................................................................................................................................................................................TGTACTTTCAAGCAGTATATAT.......................................................................................... 22 3 3 0.33 1 0 1 0 0 0 0
..............................................................................................................................................................................................................................................................................................................TTACCTCTCGGTCCTTTGTA.............................................................. 20 3 6 0.17 1 0 1 0 0 0 0
..........................................................................ACATGATCACCAATTGAAGT.................................................................................................................................................................................................................................................................................................. 20 3 10 0.10 1 0 0 1 0 0 0
..............................................................................................................................................................................................................................................................TGATGTTGAAAAAAAAAA................................................................................................................ 18 1 10 0.10 1 0 0 0 0 1 0
............................................................................................................................................................................................................................................................................................................................ATTGTTTTTTTATTCCAGC................................................. 19 2 20 0.05 1 0 1 0 0 0 0
......................................................................................................................AGCGTAGCTGGATCTGAC........................................................................................................................................................................................................................................................ 18 3 20 0.05 1 0 0 0 0 0 1

Anti-sense strand reads

GCGACAGGTACGTCCCTCCTAAGTACCTGAGGAACCGTAAACGGTGTCTCCATTTATATATTTTTCAATGTAGCTGTACTAGTAGTTAACTATAGTGATAGTGTGTAAATTGTTTTTATCGCATCGAACAAGACTTCTTTTAAAACAAATAAAGAACAACAATCGTATTGGGTTTAAGATTTGAACAGAAGACCATAAGTTGACATACAAAATACATGAAAGTGTTATCGTCTTAAAAACAAATTTTATCGTTAACTAAAACTTTTTTTTTTACAAAAAAGTTCGTCATCTATATCTACTATGATGGAGTGCAAGGAAACATAAAAATAAGGTCGTAGGATTCAAGCACAAACTATACCAACACTAGAGGCAAACGAGTCGCCA
**************************************************(((((.((((((((((((((.......((((.(((....)))))))((((................)))).)))))))......((((((..........))))))(((((((....(((..(((((((....((((.....(((((..(((.....)))....)))))...))))....)))))))..))).....)))))))....((((((((((......))))))))))..((((.(((.....)))))))..........))))))).))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total V108
head
 V107
male body		 V060
head
 M055
female body
 V040
embryo
 M057
embryo
.......................................................................................AAGTATAGTGATTGTGTGT...................................................................................................................................................................................................................................................................................... 19 2 6 5.33 32 19 9 0 4 0 0
..................................................................................................................................................................................................................................................................................................TATATCTAGGATGATGGAGT.......................................................................... 20 2 1 1.00 1 0 0 1 0 0 0
.....................................................................................................................................................................................................................................GTCTTACAAACAAATGTTATCT..................................................................................................................................... 22 3 2 0.50 1 0 0 0 0 1 0
..................................................................................................................................................................................................................ACTGCATGTAAGTGTTATCG.......................................................................................................................................................... 20 3 3 0.33 1 0 0 0 1 0 0
.....................................................................................TAAAGTATAGTGATTGTGTGT...................................................................................................................................................................................................................................................................................... 21 3 12 0.33 4 0 2 0 2 0 0
........................................................................................................................................................................................................................................................................TTTTTTTTACGAAAGAGTTC.................................................................................................... 20 2 3 0.33 1 0 0 0 0 1 0
.......................................................................................AAGTATAGTGATTGTGTG....................................................................................................................................................................................................................................................................................... 18 2 13 0.31 4 1 2 0 1 0 0
.................................................................................................................................................................................................................................................................................................TTATATCTACTATCACGGAGT.......................................................................... 21 3 5 0.20 1 0 0 1 0 0 0
.................................................................................................................................................................................................................................................................................................TTATATGTAGTATGATGGAGT.......................................................................... 21 3 7 0.14 1 0 0 1 0 0 0
..................................................................................................................................................................................................................................................................................................TATATATACGACGATGGAGT.......................................................................... 20 3 9 0.11 1 0 0 1 0 0 0
..............................................................................................................................................................................................................................TGTTATCGTATAAAAAACA............................................................................................................................................... 19 2 18 0.06 1 0 0 0 0 0 1
....................................................................................................................................................................................................................................................................................................TGGCTACGATGATGGAGT.......................................................................... 18 3 20 0.05 1 0 0 1 0 0 0
.........................................................................................CTATAGTGATTGTGGTTAA.................................................................................................................................................................................................................................................................................... 19 3 20 0.05 1 0 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4770:8197765-8198148 - der_576 CGCTGTCCATGCAGGGAGGATTCATGGACTCCTTGGCATTTGCCACAGAGGTAAATATA----TAAAAA-GTTACATC---GACA-------------TGAT----------CATCAAT------TGATATCACTATCACACA-TTTAACAAAAATAGCGTAGCTTGTTCTGA--------------------------------------------------------------------------A----GAAA-------------------AT----TTTGTTTATTTCTTGTTGTT-----------------------AGCATAACCCAAATTCT-AAA----------CTTGTCTTCTGGTATT---CAACTG-------------------------------------------------------------------------------TA--------------------TGTTTTATGTACTTTCACAATAGCAGAATTTTTGTTTA-------------------------------------------AA-----------------ATAGC-----AATTGATTTTGAAAAAA-----------AAAATGTTTTTTCAAG----------CAG--------------------------------------------------------------------------TAGAT-------AT--------AGA-TGATACTACCTCAC---------------------------------------------------------------------------------------------GTT---CCTTT--GTATTTTTAT---TCCAGCATCCTAAGTTCGTGTTTGATATGGTTGTGATCTCCGTTTGCTCAGCGGT
droYak3 3R:1988399-1988785 + CGCTGTCCATGCAGGGAGGATTCATGGACTCCTTGGCATTTGCCACAGAGGTAAATATT----TAAAAA-GATACATC---GACAGACACATTAAATC----AATATCAATAC-TCAAG------TGATATCAC-------TA-TTCAACAAAAATAGCGTAGCTTGTTCTG---------------------------------------------------------------------------------AAT-------------------ATTTGATTTGTTTATTTTCT---GTT-----------------------AGCGTAACCCAAATTCG-TAC-----------------------------------------------------------------------------------------------------------ATTTG-T-AAGTATA--TAAGCCATTACTTGGTTTATGTACTTTCATAGAAGC-----------------------------------------------------ATAGAA-----------------ATAGC-----GAATGAATTTGA-AAAA-----------AAAGGGTT--TTGAAG----------CAG-----------------------------------------------------------------------------AC---ATATGTAAGACACCAGA-TGGTCCTACCTCAC---------------------------------------------------------------------------------------------GTT---C-TTT---TGTAT-TTT---TCCAGCATCCTAAGTTCGTATTTGATATGGTTGTGCTTTCTGTTTGCTCAGCGGT
droSec2 scaffold_12:727269-727638 - CGCTGTCTATGCAGGGAGGATTCATGGACTCCTTGGCATTTGCTACAGAGGTAAATATA----TAAAAA-GATAT--CTGTGAAAAAA----CGGATA----AAGATCCGCTC-TCAATTCATGGTGATATCCA-----AATACTTTAATCAAAATAGCGTAGCATGTTCTGA----------------------------------------------------------------AAT---TTAAA----GAAT-------------------ATTGGATTTGCTTGTTTTTTGTGGTT-----------------------TGCATAAACCAAAATTT-CAA----------TTT--------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTTT--------------------------------------------GA-----------------ATAAC-----AAGTGATTATAA-AAAG-----------TAAACGTTATTTCAAG----------TAG------------------------------------------------------------------------------T---ATATGTAAAACACCAGA-TGGTACTATTTCAT---------------------------------------------------------------------------------------------CTATCTTTTTT--GTGTTT-TTC---TCCAGCATCCTAAGTTTGTGTTTGATATGGTTGTGCTTTCCGTTTGCTCAGCGGT
droSim2 3r:7840399-7840749 - dsi_11758 CGCTGTCCATGCAGGGAGGATTCATGGACTCCTTGGCATTTGCTACAGAGGTAAATATA----TAAAAA-GATAT--CTGTGAAAAAA----GGAATC----AAGATCCCTAC-TCAATTTATAGTTTTATCCA-----AATATTTTAATCAAAATAGCGTAGCATGTTCTGA----------------------------------------------------------------AAT---TTAAA----GAAT-------------------ATTTGATTTGATTGATTTTTGTGGTT-----------------------TGCATAACC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAACATATTAAGTGATTTTAA-AAAG-----------TAAACGTTTTTTCAAA----------TAG------------------------------------------------------------------------------T---ATATGTAAGACACCAGA-TGGTACTATTTCAT---------------------------------------------------------------------------------------------CTATCTTTTTT--GTATTT-TTC---TCCAGCATCCTAAGTTTGTGTTTGATATGGTTGTGCTTTCCGTTTGCTCAGCGGT
dm3 chr3R:13433353-13433704 + CGCTGTCCATGCAGGGAGGATTCATGGACTCCTTGGCATTTGCTACAGAGGTAAATATA----TATAAA-GATAT--C------------------------AA-----GCTC-TCAATTTATGATGATATCCA---------TTTTAATCAAAATAACGTAGCATGTTCTGA----------------------------------------------------------------AAT---TGAAA----GAAT-------------------ATTTGATTTGTTTGTGTTTTGTGGTTTG--------TGATT--------TGCATAACCCAAATTGCAAAA-----------TT----------------------------------------------------------------------------------------------------------------------------------------------ATAAC-------------A-------------------------------------------AA-----------------ATAAC-----AATAGATTTTAA-AAAT-----------TTAACGTTTTTTCAAG----------TAG--------------------------------------------------------------------------CTGAT---ATATGTAAGACACCAGA-TGGTACTTTCTCACT--------------------------------------------------------------------------------------------GTT---TTTTT--GTATTT-TTC---TCCAGCATCCTAAGTTTGTGTTTGATATGGTTGTGCTTTCCGTTTGTTCAGCGGT
droEug1 scf7180000405174:75802-76083 + CTCTGTCCATGCAGGGAGGATTCATGGACTCGTTGGCATTTGCCACAGAGGTATTTATA----TAAACA-AATTGGT----------------------------------------------------------------------------------------------------------------------------------------------------------------AAA---CGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGACAC-----------------------------------------------------------ATAGTATTTTGTTAATC-------------------------------------------------------------------TACT------TACCTCAAAACATATTATTTATTAACTGCGATTGTTTCTATTGGAGAAATGTTTCTTTTACCGATGGATTGTGTAAATAACTTACCAGA-TGGTCCTACCTCAC---------------------------------------------------------------------------------------------GTA---A-TTT--TTATTT-ATT---TCCAGCATCCAAAGTTCGTGTTTGATATGGTTGTGCTTTCGGTTTGCTCAGCGGT
droBia1 scf7180000302402:8097111-8097443 + CGCTGTCGATGCAGGGCGGATTCATGGACTCCTTGGCATTTGCCACAGAGGTAGGTGTA----TAACGA--------------------------------------------------------------------------------------------AGC-------------------------------------------------------------------------AAT---GGAAA----GAAT-------------------ATTGGATTTGCTTGTTCTTCATAGCTTGAACAACCTAAAACCGGCTCCT----------------------GTTTATAACCTCGTTGTTTGGTTTGGCCCAACTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATACATTATGTGGTTTATCAAATTAGGTACTTTAGCAATTTATAAGTTTCTCGTATGTAGAGTACAACATACATGGGAAGTATGTCCTATATCACTTT---C-TTT--CTATTT-ATTTTGTTCAGCATCCCAAGTTCGTGTTTGACATGGTAGTGCTTTCTGTTTGCTCAGCGGT
droTak1 scf7180000415811:171147-171422 - CGCTGTCGATGCAGGGCGGATTCATGGACTCCTTGGCATTTGCCACAGAGGTAGGTATA----TAAAAAAGACAT--CGTCTAAGG--------------------------------------------------------------------A---------------------------------------------------------------------------AAGGAAAAAT---TTAAAACACGAAT-------------------ATTGCATTAGTTTGTGCTGTATAGATTGAAGAACCTGGATCCGCCTCTT----------------------TTT-------TTTCCGTTAC--------------------------------------------------------------------------------------ATTTA-T-A-GCATAGTTAAACAGATACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTT-CATATCAC---------------------------------------------------------------------------------------------CTA---C-TTT--TTATTT-ATT---TCTAGCATCCCAAGTTCGTGTTTGACATGGTTGTGCTTTCCGTTTGCTCAGCGGT
droEle1 scf7180000491080:2849353-2849689 - CACTGTCGATGCAGGGCGGATTCATGGACTCGTTGGCATTTGCCACAGAGGTGGGTGTT----TAAAGAAGATAC---GGTGAAAGAC----------------------------------------------------------------------------------------------------------------------------------------------AACAACATGACTTC----ATAACAAGTTAGTTAACAAAGATAAATATTTAATGAATATATTCAGTATTGTT-----------------------TGGGTAACCCAAAATGCACACTATTTCAAA-------CTAAAGTTTACCCAAGCTG---A--------------------------------------------------------------------------------------------------------------------AT-ACAACCTTTTTGTTTA-------------------------------------------AC-----------------ACATA-----AATTAC-----------------------------------------------TTAA------------------------------------------------------------------------------T---ATATAAAATTCACCAGAACGGTCCTACCTCAC---------------------------------------------------------------------------------------------ATT---C-TAT--TTCTTC-ATT---TCTAGCATCCAAAGTTCGTGTTTGATATGGTGGTGCTTTCCATTTGCTCAGCGGT
droRho1 scf7180000780187:5237-5316 + C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCTCAC---------------------------------------------------------------------------------------------CTT---C-TAT--ATATTT-ATT---TCTAGCATCCAAAGTTCGTGTTTGATATGGTTGTGCTTTCTATTTGCTCAGCCGT
droFic1 scf7180000453912:2046199-2046598 - CGCTTTCGATGCAGGGAGGATTCATGGACTCGTTGACATTTGCCACAGAGGTAAGACCT----TAAAAA-GCAATATCT----------------------------------------------------CTCGAAAACATA-TGCAACGAGAA---------------------------------------------------------------------------AAGGAAATGTATTA----ATAGGAAT-------------------GTTAGTTTTAAAT-------GCTGGT-----------------------TAAATAACCTAAATACC-GAC----------CTTTCCATTAGGTTTGCACCACCAGCTGC----------------------------------------------------------------------------------------------------------------------------TGTTTTGTTGATCATTCAAGCTTTCTTTAATTATTAATTCTAGTAAAAGCAAGTCA-------------------AGC-----TAAATCGTTTAA-GAAGATCTTTATTTGTAAGGGTTCTTGTAAAGAAAAACACTTA-------------------------------------------------------------------------------------ATATTATTCACCAGA-TGGTCCTACCTCAC---------------------------------------------------------------------------------------------GTT---C-TAT--TTATTT-A-T---TCCAGCACCCAAAGTTCGTGTTTGATATGGTGGTGCTTTCCATTTGCTCAGCGGT
droKik1 scf7180000302461:1097355-1097437 - AT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTACCTCAC---------------------------------------------------------------------------------------------GTT---C-TTT--CCATTT-ATT---TCCAGCATCCAAAGTTTGTGTTTGACATGGTTGTGCTTTCCATTTGCTCAGCGGT
droAna3 scaffold_13340:5725814-5725893 + C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCAC---------------------------------------------------------------------------------------------TTA---T-ACT--TTGTTT-ATT---TCCAGCATCCTAAATTCGTATTCGATATGGTTGTGCTCTCTATTTGCTCAGCGGT
droBip1 scf7180000396708:3087676-3087743 - CGTTGTCCATGCAGGGCGGGTTCATGGATTCCCTGGCCTTTGCCACGGAGGTATGTGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAATATT------------------------
dp5 2:23767681-23767772 - TATATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTCCTACCTCACGTATTAAGTGTC--------------------------------------------------------------------------------------------------TT-ATT---TTCAGCATCCGAAATTCGTTTTTGATATGGTTGTGCTCTCCATTTGCTCAGCAGT
droPer2 scaffold_3:6542536-6542627 - TATATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTCCTACCTCACGTATTAAGTGTC--------------------------------------------------------------------------------------------------TT-ATT---TTTAGCATCCGAAATTCGTTTTTGATATGGTTGTGCTCTCCATTTGCTCAGCAGT
droWil2 scf2_1100000004902:8528685-8528765 + ACTTT-C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------------------------------------------------------------------------TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTCATTTCT----------------------------------------------------------------------------------------------------------------CAT-TGT---TATAGCATCCGAAGTTTGTGTTTGACATGATTATACTATCCATATGCTCAGCTGT
droVir3 scaffold_13047:17172112-17172202 - CGCTTTCGATGCAGGGCGGCTTTATGGACTCCCTGGCGTTTGCTACAGAGGTAAGCTACCCCACAATAA-G-----TA---GACT-------------TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------ATACC-----AATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAT
droMoj3 scaffold_6540:14464319-14464617 + CGCTCTCCATGCAGGGCGGCTTCATGGACTCACTGGCATTTGCCACAGAGGTGAGTGGCCTT---------------------------------------------------------------------------------------------------------AATTTAAATTCTTTTTATTCATATACTAATATTAAAAACTAAATGCAGAAGGGCCCTTAAAGAAGGGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATAATGCTTATTTATATATTTCTGTAGTTTTTAATT--------------------TGTTTATTGAAATTGCCCATTCGC-----------------------------------------------------------ATAATGTATTCTTAAAT-------------------------------------------------------------------TTCT------AACAGCTAACC-----------------------------------------------------------------------------------------AAT----TTAATTGTT--------------------------------------------------------------------------------------------------TA-ACT---TATAGCATCCCAAGTTTGTCTTCGACATGGTTATTCTATCCATATGCTCTGCTGT
droGri2 scaffold_14906:12243552-12243854 - CGCTTTCCATGCAGGGCGGCTTCATGGACTCGCTAGCCTTTGCCACGGAGGTGAGTTACCCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGT-------------------CTTGAATGTGTTTATTTC----------------------------------------------------------------------------------ATTATTTGCTGATCTACGTATAGATTAAAATCGTATATTAAACTCTATTCTTCATGCTTAGTC-GATATTT--GTACACTAT-ATT--------------------TGTTTATT--------------------------------------------------------------------------------------------------------------CTAC--ACG-----------AGAACACATTTTCAAA----------T--TCCATACGGAAACAGCTAA-----------------------------------------------------------------------------CAA-TGGTTAACCCAATT---------------------------------------------------------------------------------------------------GTTTTGTTT-AAT-TTA---TGTAGCATCCCAAGTTTGTGTTTGATATGGTTGTGCTCTCCATTTGCTCAGCGGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
CGCTGTCCATGCAGGGAGGATTCATGGACTCCTTGGCATTTGCCACAGAGGTAAATATA----TAAAAA-GTTACATC---GACA-------------TGAT----------CATCAAT------TGATATCACTATCACACA-TTTAACAAAAATAGCGTAGCTTGTTCTGA--------------------------------------------------------------------------A----GAAA-------------------AT----TTTGTTTATTTCTTGTTGTT-----------------------AGCATAACCCAAATTCT-AAA----------CTTGTCTTCTGGTATT---CAACTG-------------------------------------------------------------------------------TA--------------------TGTTTTATGTACTTTCACAATAGCAGAATTTTTGTTTA-------------------------------------------AA-----------------ATAGC-----AATTGATTTTGAAAAAA-----------AAAATGTTTTTTCAAG----------CAG--------------------------------------------------------------------------TAGAT-------AT--------AGA-TGATACTACCTCAC---------------------------------------------------------------------------------------------GTT---CCTTT--GTATTTTTAT---TCCAGCATCCTAAGTTCGTGTTTGATATGGTTGTGATCTCCGTTTGCTCAGCGGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTAAGTTCGTGTTTGATA............................2111.0010000100
....GTCCATGCAGGGAGGATTCATGGACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATATGGTTGTGATCTCCGTTTGCTC......2711.0011000000
...............GAGGATTCATGGACTCCTTGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTAAGTTCGTGTTTGATATGGTTGTG....................2711.0011000000
droYak3
CGCTGTCCATGCAGGGAGGATTCATGGACTCCTTGGCATTTGCCACAGAGGTAAATATT----TAAAAA-GATACATC---GACAGACACATTAAATC----AATATCAATAC-TCAAG------TGATATCAC-------TA-TTCAACAAAAATAGCGTAGCTTGTTCTG---------------------------------------------------------------------------------AAT-------------------ATTTGATTTGTTTATTTTCT---GTT-----------------------AGCGTAACCCAAATTCG-TAC-----------------------------------------------------------------------------------------------------------ATTTG-T-AAGTATA--TAAGCCATTACTTGGTTTATGTACTTTCATAGAAGC-----------------------------------------------------ATAGAA-----------------ATAGC-----GAATGAATTTGA-AAAA-----------AAAGGGTT--TTGAAG----------CAG-----------------------------------------------------------------------------AC---ATATGTAAGACACCAGA-TGGTCCTACCTCAC---------------------------------------------------------------------------------------------GTT---C-TTT---TGTAT-TTT---TCCAGCATCCTAAGTTCGTATTTGATATGGTTGTGCTTTCTGTTTGCTCAGCGGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGTTGTGCTTTCTGTTTGCTCAGCGG.29113.0013000000000013
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTGCTTTCTGTTTGCTCAGCGGT2514.00400000000004
.....................TCATGGACTCCTTGGCATTTGCCACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.00202000000000
.........TGCAGGGAGGATTCATGGACTCCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00202000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTTCGTATTTGATATGGTTGTGC...................2612.00202000000000
.........TGCAGGGAGGATTCATGGACTCCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2412.00202000000000
.....................TCATGGACTCCTTGGCATTTGCCACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2712.00202000000000
.....................TCATGGACTCCTTGGCATTTGCCAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2512.00211000000000
....................TTCATGGACTCCTTGGCATTTGCC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAG----------CAG-----------------------------------------------------------------------------AC---ATATGTAAGACACCAGA-............................................................................................................................................................................................2611.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTTGATATGGTTGTGCTTTCTGTT...........2611.00100000010000
....................TTCATGGACTCCTTGGCATTTGCCAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
......................CATGGACTCCTTGGCATTTGCCACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTTCGTATTTGATATGGTTGTGCT..................2711.00101000000000
CGCTGTCCATGCAGGGAGGATTCATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
.....TCCATGCAGGGAGGATTCATGGACTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
...TGTCCATGCAGGGAGGATTCATGGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGTATTTGATATGGTTGTGCTTTC...............2511.00101000000000
..................GATTCATGGACTCCTTGGCATTTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
....................TTCATGGACTCCTTGGCATTTGCCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.00101000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATATGGTTGTGCTTTCTGTTTGC........2711.00101000000000
....................TTCATGGACTCCTTGGCATTTGCCACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.00101000000000
..................GATTCATGGACTCCTTGGCATTTGCCAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.00101000000000
...............GAGGATTCATGGACTCCTTGGCAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
droSec2
CGCTGTCTATGCAGGGAGGATTCATGGACTCCTTGGCATTTGCTACAGAGGTAAATATA----TAAAAA-GATAT--CTGTGAAAAAA----CGGATA----AAGATCCGCTC-TCAATTCATGGTGATATCCA-----AATACTTTAATCAAAATAGCGTAGCATGTTCTGA----------------------------------------------------------------AAT---TTAAA----GAAT-------------------ATTGGATTTGCTTGTTTTTTGTGGTT-----------------------TGCATAAACCAAAATTT-CAA----------TTT--------------------------------------------------------------------------------------------------------------------------------------------------------TTTTTTTT--------------------------------------------GA-----------------ATAAC-----AAGTGATTATAA-AAAG-----------TAAACGTTATTTCAAG----------TAG------------------------------------------------------------------------------T---ATATGTAAAACACCAGA-TGGTACTATTTCAT---------------------------------------------------------------------------------------------CTATCTTTTTT--GTGTTT-TTC---TCCAGCATCCTAAGTTTGTGTTTGATATGGTTGTGCTTTCCGTTTGCTCAGCGGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATATGGTTGTGCTTTCCGT............2211.0010010
....GTCTATGCAGGGAGGATTCATGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
droSim2
CGCTGTCCATGCAGGGAGGATTCATGGACTCCTTGGCATTTGCTACAGAGGTAAATATA----TAAAAA-GATAT--CTGTGAAAAAA----GGAATC----AAGATCCCTAC-TCAATTTATAGTTTTATCCA-----AATATTTTAATCAAAATAGCGTAGCATGTTCTGA----------------------------------------------------------------AAT---TTAAA----GAAT-------------------ATTTGATTTGATTGATTTTTGTGGTT-----------------------TGCATAACC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATAACATATTAAGTGATTTTAA-AAAG-----------TAAACGTTTTTTCAAA----------TAG------------------------------------------------------------------------------T---ATATGTAAGACACCAGA-TGGTACTATTTCAT---------------------------------------------------------------------------------------------CTATCTTTTTT--GTATTT-TTC---TCCAGCATCCTAAGTTTGTGTTTGATATGGTTGTGCTTTCCGTTTGCTCAGCGGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
...TGTCCATGCAGGGAGGATTCATGGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2614.00400010000003000000
.........TGCAGGGAGGATTCATGGACTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00100000001000000000
........ATGCAGGGAGGATTCATGGACTCCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000001000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATATGGTTGTGCTTTCCGTT...........2111.00100000000001000000
..........GCAGGGAGGATTCATGGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000000000000000
...................ATTCATGGACTCCTTGGCAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00100000000000001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGTTGTGCTTTCCGTTTGCTCAG....2611.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTTTGTGTTTGATATGGT........................2111.00100010000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATATGGTTGTGCTTTCCGTTTGC........2611.00100000000001000000
......................................................ATATA----TAAAAA-GATA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1560.17100000010000000000
...................................................................................................................................................................................................................................................................................ATTTGATTTGATTGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................15120.08100000010000000000
dm3
CGCTGTCCATGCAGGGAGGATTCATGGACTCCTTGGCATTTGCTACAGAGGTAAATATA----TATAAA-GATAT--C------------------------AA-----GCTC-TCAATTTATGATGATATCCA---------TTTTAATCAAAATAACGTAGCATGTTCTGA----------------------------------------------------------------AAT---TGAAA----GAAT-------------------ATTTGATTTGTTTGTGTTTTGTGGTTTG--------TGATT--------TGCATAACCCAAATTGCAAAA-----------TT----------------------------------------------------------------------------------------------------------------------------------------------ATAAC-------------A-------------------------------------------AA-----------------ATAAC-----AATAGATTTTAA-AAAT-----------TTAACGTTTTTTCAAG----------TAG--------------------------------------------------------------------------CTGAT---ATATGTAAGACACCAGA-TGGTACTTTCTCACT--------------------------------------------------------------------------------------------GTT---TTTTT--GTATTT-TTC---TCCAGCATCCTAAGTTTGTGTTTGATATGGTTGTGCTTTCCGTTTGTTCAGCGGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....TCCATGCAGGGAGGATTCATGGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2415.0050000000000000000000000000000000000000000100000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
.......CATGCAGGGAGGATTCATGGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2214.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTTTGTGTTTGATATGGTTGTGC...................2614.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000
...TGTCCATGCAGGGAGGATTCATGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000
.GCTGTCCATGCAGGGAGGATTCATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2514.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000100000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTTGATATGGTTGTGCTTTCCGT............2513.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTAAGTTTGTGTTTGATATGGT........................2413.0030000000000000000000000000000000000000000000000010000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATATGGTTGTGCTTTCCGTTTGT........2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAGTTTGTGTTTGATATGGTTGT.....................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCCTAAGTTTGTGTTTGATATGGT........................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGTTGTGCTTTCCGTTTG.........2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTGTGCTTTCCGTTTGTTCAGCG..2612.0020000000000000000000000000000000000000000100000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTTTGTGTTTGATATGGTTGTGCT..................2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTTTGATATGGTTGTGCTTTC...............2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTTTGTGTTTGATATGG.........................2012.0020000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........ATGCAGGGAGGATTCATGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATATGGTTGTGCTTTCCGTTTGT........2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAGTTTGTGTTTGATATGG.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
.....TCCATGCAGGGAGGATTCATGGACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAACGTTTTTTCAAG----------TAG--------------------------------------------------------------------------CTGAT---A.............................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................TTTAATCAAAATAACGTAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................TAAA-GATAT--C------------------------AA-----GCTC-TC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCATGGACTCCTTGGCATTTGCTAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTGTTTGATATGGTTGTGCT..................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
.................GGATTCATGGACTCCTTGGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GAGGATTCATGGACTCCTTGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAGTTTGTGTTTGATATGGTTGTG....................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
...........CAGGGAGGATTCATGGACTCCTTGGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TGGACTCCTTGGCATTTGCTACAGAGGT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........GCAGGGAGGATTCATGGACT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
................................................................................................................................................TTTAATCAAAATAACGTA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............GAGGATTCATGGACTCCTTGGCAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TCATGGACTCCTTGGCATTTGCTACAGA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................ATTCATGGACTCCTTGGCATTTGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATCCTAAGTTTGTGTTT................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGTTTGATATGGTTGTGCTTTCCG.............2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGTGTTTGATATGGT........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGTTGTGCTTTCCGTTTGTTCAGCG..2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................T-------------------ATTTGATTTGTTTGTGTTTTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000
.....................TCATGGACTCCTTGGCATTTGCTA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATATGGTTGTGCTTTCCG.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
....GTCCATGCAGGGAGGATTCATGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGTTGTGCTTTCCGTTTGTTC......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATGGTTGTGCTTTCCGTTTGTTCA.....2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................TGGACTCCTTGGCATTTGCTACAGAGC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGTGTTTGATATGGTTGTGCTTTCC..............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAAGTTTGTGTTTGATATGGT........................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATCCTAAGTTTGTGTTTGATATGGT........................2811.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTTTGATATGGTTGTGCTTTCCGTT...........2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATATGGTTGTGCTTTCC..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
...............GAGGATTCATGGACTCCTTGGCATT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGATATGGTTGTGCTTTCCGT............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........CAGGGAGGATTCATGGACTCCTTGGCAT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CATGCAGGGAGGATTCATGGACTCCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGATATGGTTGTGCTTTCCG.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
.........TGCAGGGAGGATTCATGGACTCCTTGA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...TGTCCATGCAGGGAGGATTCATGGAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCTAAGTTTGTGTTTGATATGGT........................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGCTTTCCGTTTGTTCAGCGGT2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGTTTGATATGGTTGTGCTTTCCGT............2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.........TGCAGGGAGGATTCATGGGA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2020.5010000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TT---TTTTT--GTATTT-TTC---TCCC...................................................2020.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................TTTGTTTGTGTTTTGTGGTAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2140.2510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
CTCTGTCCATGCAGGGAGGATTCATGGACTCGTTGGCATTTGCCACAGAGGTATTTATA----TAAACA-AATTGGT----------------------------------------------------------------------------------------------------------------------------------------------------------------AAA---CGAAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGACAC-----------------------------------------------------------ATAGTATTTTGTTAATC-------------------------------------------------------------------TACT------TACCTCAAAACATATTATTTATTAACTGCGATTGTTTCTATTGGAGAAATGTTTCTTTTACCGATGGATTGTGTAAATAACTTACCAGA-TGGTCCTACCTCAC---------------------------------------------------------------------------------------------GTA---A-TTT--TTATTT-ATT---TCCAGCATCCAAAGTTCGTGTTTGATATGGTTGTGCTTTCGGTTTGCTCAGCGGTSizeHit CountTotal NormTotal
No Reads
droBia1
CGCTGTCGATGCAGGGCGGATTCATGGACTCCTTGGCATTTGCCACAGAGGTAGGTGTA----TAACGA--------------------------------------------------------------------------------------------AGC-------------------------------------------------------------------------AAT---GGAAA----GAAT-------------------ATTGGATTTGCTTGTTCTTCATAGCTTGAACAACCTAAAACCGGCTCCT----------------------GTTTATAACCTCGTTGTTTGGTTTGGCCCAACTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATACATTATGTGGTTTATCAAATTAGGTACTTTAGCAATTTATAAGTTTCTCGTATGTAGAGTACAACATACATGGGAAGTATGTCCTATATCACTTT---C-TTT--CTATTT-ATTTTGTTCAGCATCCCAAGTTCGTGTTTGACATGGTAGTGCTTTCTGTTTGCTCAGCGGTSizeHit CountTotal NormTotal
No Reads
droTak1
CGCTGTCGATGCAGGGCGGATTCATGGACTCCTTGGCATTTGCCACAGAGGTAGGTATA----TAAAAAAGACAT--CGTCTAAGG--------------------------------------------------------------------A---------------------------------------------------------------------------AAGGAAAAAT---TTAAAACACGAAT-------------------ATTGCATTAGTTTGTGCTGTATAGATTGAAGAACCTGGATCCGCCTCTT----------------------TTT-------TTTCCGTTAC--------------------------------------------------------------------------------------ATTTA-T-A-GCATAGTTAAACAGATACA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTT-CATATCAC---------------------------------------------------------------------------------------------CTA---C-TTT--TTATTT-ATT---TCTAGCATCCCAAGTTCGTGTTTGACATGGTTGTGCTTTCCGTTTGCTCAGCGGTSizeHit CountTotal NormTotal
No Reads
droEle1
CACTGTCGATGCAGGGCGGATTCATGGACTCGTTGGCATTTGCCACAGAGGTGGGTGTT----TAAAGAAGATAC---GGTGAAAGAC----------------------------------------------------------------------------------------------------------------------------------------------AACAACATGACTTC----ATAACAAGTTAGTTAACAAAGATAAATATTTAATGAATATATTCAGTATTGTT-----------------------TGGGTAACCCAAAATGCACACTATTTCAAA-------CTAAAGTTTACCCAAGCTG---A--------------------------------------------------------------------------------------------------------------------AT-ACAACCTTTTTGTTTA-------------------------------------------AC-----------------ACATA-----AATTAC-----------------------------------------------TTAA------------------------------------------------------------------------------T---ATATAAAATTCACCAGAACGGTCCTACCTCAC---------------------------------------------------------------------------------------------ATT---C-TAT--TTCTTC-ATT---TCTAGCATCCAAAGTTCGTGTTTGATATGGTGGTGCTTTCCATTTGCTCAGCGGTSizeHit CountTotal NormTotal
No Reads
droRho1
C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATCTCAC---------------------------------------------------------------------------------------------CTT---C-TAT--ATATTT-ATT---TCTAGCATCCAAAGTTCGTGTTTGATATGGTTGTGCTTTCTATTTGCTCAGCCGTSizeHit CountTotal NormTotal
No Reads
droFic1
CGCTTTCGATGCAGGGAGGATTCATGGACTCGTTGACATTTGCCACAGAGGTAAGACCT----TAAAAA-GCAATATCT----------------------------------------------------CTCGAAAACATA-TGCAACGAGAA---------------------------------------------------------------------------AAGGAAATGTATTA----ATAGGAAT-------------------GTTAGTTTTAAAT-------GCTGGT-----------------------TAAATAACCTAAATACC-GAC----------CTTTCCATTAGGTTTGCACCACCAGCTGC----------------------------------------------------------------------------------------------------------------------------TGTTTTGTTGATCATTCAAGCTTTCTTTAATTATTAATTCTAGTAAAAGCAAGTCA-------------------AGC-----TAAATCGTTTAA-GAAGATCTTTATTTGTAAGGGTTCTTGTAAAGAAAAACACTTA-------------------------------------------------------------------------------------ATATTATTCACCAGA-TGGTCCTACCTCAC---------------------------------------------------------------------------------------------GTT---C-TAT--TTATTT-A-T---TCCAGCACCCAAAGTTCGTGTTTGATATGGTGGTGCTTTCCATTTGCTCAGCGGTSizeHit CountTotal NormTotal
No Reads
droKik1
AT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCTACCTCAC---------------------------------------------------------------------------------------------GTT---C-TTT--CCATTT-ATT---TCCAGCATCCAAAGTTTGTGTTTGACATGGTTGTGCTTTCCATTTGCTCAGCGGTSizeHit CountTotal NormTotal
No Reads
droAna3
C---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TACCTCAC---------------------------------------------------------------------------------------------TTA---T-ACT--TTGTTT-ATT---TCCAGCATCCTAAATTCGTATTCGATATGGTTGTGCTCTCTATTTGCTCAGCGGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGTTGTGCTCTCTATTTGC........2311.001100000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATGGTTGTGCTCTCTATTTGCC.......2411.001010000
droBip1
CGTTGTCCATGCAGGGCGGGTTCATGGATTCCCTGGCCTTTGCCACGGAGGTATGTGTT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGAAATATT------------------------SizeHit CountTotal NormTotal
No Reads
dp5
TATATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTCCTACCTCACGTATTAAGTGTC--------------------------------------------------------------------------------------------------TT-ATT---TTCAGCATCCGAAATTCGTTTTTGATATGGTTGTGCTCTCCATTTGCTCAGCAGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGTTGTGCTCTCCATTTGCTCAGC...2611.0010010000000
droPer2
TATATT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGTCCTACCTCACGTATTAAGTGTC--------------------------------------------------------------------------------------------------TT-ATT---TTTAGCATCCGAAATTCGTTTTTGATATGGTTGTGCTCTCCATTTGCTCAGCAGTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
No Reads
droWil2
ACTTT-C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------T-----------------------------------------------------------------------------------------------------TT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTCATTTCT----------------------------------------------------------------------------------------------------------------CAT-TGT---TATAGCATCCGAAGTTTGTGTTTGACATGATTATACTATCCATATGCTCAGCTGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGACATGATTATACTATCC..............2211.00100010
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCGAAGTTTGTGTTTGACATGA.........................2411.00100010
droVir3
CGCTTTCGATGCAGGGCGGCTTTATGGACTCCCTGGCGTTTGCTACAGAGGTAAGCTACCCCACAATAA-G-----TA---GACT-------------TG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-----------------ATACC-----AATT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
No Reads
droMoj3
CGCTCTCCATGCAGGGCGGCTTCATGGACTCACTGGCATTTGCCACAGAGGTGAGTGGCCTT---------------------------------------------------------------------------------------------------------AATTTAAATTCTTTTTATTCATATACTAATATTAAAAACTAAATGCAGAAGGGCCCTTAAAGAAGGGCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTGATAATGCTTATTTATATATTTCTGTAGTTTTTAATT--------------------TGTTTATTGAAATTGCCCATTCGC-----------------------------------------------------------ATAATGTATTCTTAAAT-------------------------------------------------------------------TTCT------AACAGCTAACC-----------------------------------------------------------------------------------------AAT----TTAATTGTT--------------------------------------------------------------------------------------------------TA-ACT---TATAGCATCCCAAGTTTGTCTTCGACATGGTTATTCTATCCATATGCTCTGCTGTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
CGCTTTCCATGCAGGGCGGCTTCATGGACTCGCTAGCCTTTGCCACGGAGGTGAGTTACCCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGT-------------------CTTGAATGTGTTTATTTC----------------------------------------------------------------------------------ATTATTTGCTGATCTACGTATAGATTAAAATCGTATATTAAACTCTATTCTTCATGCTTAGTC-GATATTT--GTACACTAT-ATT--------------------TGTTTATT--------------------------------------------------------------------------------------------------------------CTAC--ACG-----------AGAACACATTTTCAAA----------T--TCCATACGGAAACAGCTAA-----------------------------------------------------------------------------CAA-TGGTTAACCCAATT---------------------------------------------------------------------------------------------------GTTTTGTTT-AAT-TTA---TGTAGCATCCCAAGTTTGTGTTTGATATGGTTGTGCTCTCCATTTGCTCAGCGGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 10:36 PM