ID:

der_566

 Coordinate:

scaffold_4770:6415121-6415179 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-14.1 -14.1 -13.7

Flybase annnotation

CDS [Dere\GG23262-cds]; exon [dere_GLEANR_810:2]; exon [dere_GLEANR_810:1]; CDS [Dere\GG23262-cds]; intron [Dere\GG23262-in]

No Repeatable elements found

Sense Strand Reads

##################################################-----------------------------------------------------------##################################################
CCCAGAAATTAGACAACTTCGATGCTAGCAACAACGCCACCTGGCAGAATGTAAGGACTAGCTGGAAATAAAGTACTGTCAGCTTTACTGACGTCTCTTTATTCCGCAGCGAATCTACATCAACAACAAATACTTTGTGGATGGCTCTCCCATCTTTAT
*************************************************************.(((((.(((((...((((((.....))))))...))))))))))...************************************************** 		Read size # Mismatch Hit Count Total Norm Total V107
male body		 V108
head
 M055
female body
 V060
head
 V040
embryo
................................................................................................................................AATACTTTGTGGATGGCTCTCC......... 22 0 1 20.00 20 14 4 2 0 0
...............................................................................................................................AAATACTTTGTGGATGGCTCTCC......... 23 0 1 15.00 15 10 2 3 0 0
.................................................................................................................................ATACTTTGTGGATGGCTCTCC......... 21 0 1 13.00 13 11 1 0 1 0
............................................................................................................................AACAAATACTTTGTGGATGGCTCTCC......... 26 0 1 7.00 7 5 0 2 0 0
...............................................................................................................................AAATACTTTGTGGATGGCT............. 19 0 1 7.00 7 2 4 1 0 0
..................................................................................................................................TACTTTGTGGATGGCTCTCC......... 20 0 1 6.00 6 2 2 2 0 0
.............................................................CTGGAAATAAAGTACTGTCAGCT........................................................................... 23 0 1 6.00 6 4 0 2 0 0
.......ATTAGACAACTTCGATGCTAGC.................................................................................................................................. 22 0 1 5.00 5 1 1 3 0 0
.............................................................CTGGAAATAAAGTACTGTC............................................................................... 19 0 1 4.00 4 1 0 3 0 0
................................................................................................................................AATACTTTGTGGATGGCT............. 18 0 1 4.00 4 0 4 0 0 0
.................................................................................................................................ATACTTTGTGGATGGCTCTCCC........ 22 0 1 4.00 4 2 1 1 0 0
.............................................................CTGGAAATAAAGTACTGTCAGC............................................................................ 22 0 1 4.00 4 1 0 3 0 0
...............................................................................................................................AAATACTTTGTGGATGGCTCTCCC........ 24 0 1 4.00 4 1 3 0 0 0
......AATTAGACAACTTCGATGCT..................................................................................................................................... 20 0 1 4.00 4 2 1 1 0 0
.................................................................................................................................ATACTTTGTGGATGGCTCT........... 19 0 1 4.00 4 1 3 0 0 0
............................................................................................................................AACAAATACTTTGTGGATGGCT............. 22 0 1 4.00 4 2 2 0 0 0
..........................................................................................................................ACAACAAATACTTTGTGGATGGCT............. 24 0 1 4.00 4 4 0 0 0 0
.............................................................CTGGAAATAAAGTACTGTCAGCTTTA........................................................................ 26 0 1 3.00 3 2 0 1 0 0
...................................................................................................................................ACTTTGTGGATGGCTCTCCC........ 20 0 1 3.00 3 0 2 1 0 0
............................................................................................................................AACAAATACTTTGTGGATGGCTCTCCC........ 27 0 1 3.00 3 1 0 2 0 0
......AATTAGACAACTTCGATGCTAGC.................................................................................................................................. 23 0 1 3.00 3 0 3 0 0 0
..........AGACAACTTCGATGCTAGC.................................................................................................................................. 19 0 1 3.00 3 0 2 1 0 0
.............................................................CTGGAAATAAAGTACTGTCAGCTTTAC....................................................................... 27 0 1 2.00 2 1 1 0 0 0
............ACAACTTCGATGCTAGCAAC............................................................................................................................... 20 0 1 2.00 2 2 0 0 0 0
..............AACTTCGATGCTAGCAACAACGC.......................................................................................................................... 23 0 1 2.00 2 1 0 1 0 0
...............................................................................................................................AAATACTTTGTGGATGGCTC............ 20 0 1 2.00 2 2 0 0 0 0
...............ACTTCGATGCTAGCAACAACGC.......................................................................................................................... 22 0 1 2.00 2 1 1 0 0 0
.............................................................CTGGAAATAAAGTACTGTCAG............................................................................. 21 0 1 2.00 2 1 0 1 0 0
...........................GCAACAACGCCACCTGGCAGAATCG........................................................................................................... 25 2 1 2.00 2 0 0 2 0 0
...........GACAACTTCGATGCTAGC.................................................................................................................................. 18 0 1 2.00 2 0 1 1 0 0
....GAAATTAGACAACTTCGATGCTA.................................................................................................................................... 23 0 1 2.00 2 2 0 0 0 0
...................CGATGCTAGCAACAACGC.......................................................................................................................... 18 0 1 2.00 2 0 2 0 0 0
..........AGACAACTTCGATGCTAG................................................................................................................................... 18 0 1 2.00 2 0 2 0 0 0
......AATTAGACAACTTCGATGCTA.................................................................................................................................... 21 0 1 2.00 2 2 0 0 0 0
.............................................................................................................................ACAAATACTTTGTGGATGGCT............. 21 0 1 2.00 2 1 1 0 0 0
.......ATTAGACAACTTCGATGCT..................................................................................................................................... 19 0 1 2.00 2 2 0 0 0 0
.............CAACTTCGATGCTAGCAACAACGC.......................................................................................................................... 24 0 1 2.00 2 0 2 0 0 0
...........................GCAACAACGCCACCTGGCAGA............................................................................................................... 21 0 1 2.00 2 0 1 1 0 0
.........................................................................................................................AACAACAAATACTTTGTGGATGGCT............. 25 0 1 2.00 2 1 1 0 0 0
...........................GCAACAACGCCACCTGGCAGAATCGAAT........................................................................................................ 28 3 1 2.00 2 1 0 1 0 0
........TTAGACAACTTCGATGCTAGC.................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
CCCAGAAATTAGACAACTTCGAT........................................................................................................................................ 23 0 1 1.00 1 1 0 0 0 0
...AGAAATTAGACAACTTCGAT........................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0
.....................ATGCTAGCAACAACGCCACCT..................................................................................................................... 21 0 1 1.00 1 0 0 1 0 0
...............................................................................................................................AAATACTTTGTGAATGGCT............. 19 1 1 1.00 1 1 0 0 0 0
.......ATTAGACAACTTCGATGCTAGCAACAA............................................................................................................................. 27 0 1 1.00 1 1 0 0 0 0
............................................................................................................................AACAAATACTTTGTGGATGG............... 20 0 1 1.00 1 0 1 0 0 0
..............AACTTCGATGCTAGCAACAACGCCACCT..................................................................................................................... 28 0 1 1.00 1 1 0 0 0 0
.............CAACTTCGATGCTAGCAACAACGCCACCT..................................................................................................................... 29 0 1 1.00 1 0 0 1 0 0
...........GACAACTTCGATGCTAGCAA................................................................................................................................ 20 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................CAAATAATTTGTGGATGTCT............. 20 2 1 1.00 1 0 1 0 0 0
............................................................GCTGGAAATAAAGTACTGTCAG............................................................................. 22 0 1 1.00 1 0 0 1 0 0
................................................................................AGCTTTACTGACGTCTCTTTATTCCGCA................................................... 28 0 1 1.00 1 0 0 1 0 0
..................TCGATGCTAGCAACAACGC.......................................................................................................................... 19 0 1 1.00 1 0 0 1 0 0
...............................................................GGAAATAAAGTACTGTCAGCTTTA........................................................................ 24 0 1 1.00 1 0 0 1 0 0
...........................................................................................................ATCGAATCTACATCAACAACAA.............................. 22 1 1 1.00 1 0 0 1 0 0
....................................................................................................................................CTTTGTGGATGGCTCTCCC........ 19 0 1 1.00 1 1 0 0 0 0
..............AACTTCGATGCTAGCAACAACGCCACC...................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0
...........................................................................................................................CAACAAATACTTTGTGGATGGCTCTCCC........ 28 0 1 1.00 1 0 1 0 0 0
..................................................GTAAGGACTAGCTGGAAAT.......................................................................................... 19 0 1 1.00 1 0 1 0 0 0
.................TTCGATGCTAGCAACAACGCCACCTGGCA................................................................................................................. 29 0 1 1.00 1 0 1 0 0 0
.................................................................................................................................ATACTTTGTGGATGGCTCTC.......... 20 0 1 1.00 1 1 0 0 0 0
..........................................................................................................................ACAACAAATACTTTGTGGATGGCTCTCC......... 28 0 1 1.00 1 0 0 1 0 0
............................CAACAACGCCACCTGGCAGAAT............................................................................................................. 22 0 1 1.00 1 0 0 1 0 0
.................................................................................................................................ATACTTTGTGGATGGCTCTCCCAT...... 24 0 1 1.00 1 0 1 0 0 0
.......ATTAGACAACTTCGATGCTA.................................................................................................................................... 20 0 1 1.00 1 1 0 0 0 0
...........TACAACTTCGATGCTAGCAAC............................................................................................................................... 21 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................CATCAACACCAAATACTTTGT..................... 21 1 1 1.00 1 0 0 1 0 0
.........................................................................................................GAATCGAATCTACATCAACAAC................................ 22 2 1 1.00 1 0 0 1 0 0
.................................................................................................................................ATACTTTGTGGATGTCTCT........... 19 1 1 1.00 1 0 1 0 0 0
.........................................................................................................................AACAACAAATACTTTGTGGATGGCTCTC.......... 28 0 1 1.00 1 0 1 0 0 0
................................................................................................................................AATACTTTGTGGATGGCTCTCCC........ 23 0 1 1.00 1 1 0 0 0 0
..............................................................................................................................CAAATACTTTGTGGATGGCTCTCC......... 24 0 1 1.00 1 1 0 0 0 0
.........................................................................................................................AACAACAAATACTTTGTGGATGGCTCTCC......... 29 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................AAATACTTTGTGGATGGCTCTC.......... 22 0 1 1.00 1 0 1 0 0 0
....................GATTCTAGCAACAACGCCACCT..................................................................................................................... 22 1 1 1.00 1 0 0 1 0 0
........................CTAGCAACAACGCCACCTGGCAGA............................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
..................TCGATGCTAGCAACAACGCCA........................................................................................................................ 21 0 1 1.00 1 0 0 1 0 0
...................CGATGCTAGCAACAACGCC......................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0
.............................................................................................................CGAATCTACATCAACAACA............................... 19 0 1 1.00 1 0 0 0 1 0
................CTTCGATGCTAGCAACAAC............................................................................................................................ 19 0 1 1.00 1 0 1 0 0 0
.............................AACAACGCCACCTGGCAGA............................................................................................................... 19 0 1 1.00 1 0 0 1 0 0
...........................GCAACAACGCCACCTGGCAGAATC............................................................................................................ 24 1 1 1.00 1 1 0 0 0 0
.............................................................CTGGAATTAAAGTACTGTCAGC............................................................................ 22 1 1 1.00 1 1 0 0 0 0
...........GACAACTTCGATGCTAGCAACAACGC.......................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0
...........................................................................................................ATCGAATCTACATCAACAACA............................... 21 1 1 1.00 1 0 0 1 0 0
...........GACAACTTCGATGCTAGCAAC............................................................................................................................... 21 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................CTCTGTGGATGGCTCTCC......... 18 1 1 1.00 1 0 1 0 0 0
...............................CAACGCCACCTGGCAGAATCG........................................................................................................... 21 2 1 1.00 1 1 0 0 0 0
..............................................................TGGAAATAAAGTACTGTCAGCTTT......................................................................... 24 0 1 1.00 1 0 0 1 0 0
...........GACAACTTCGATGCTAGCAACA.............................................................................................................................. 22 0 1 1.00 1 1 0 0 0 0
.......ATTAGACAACTTCGATGCTAGCAACA.............................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0
........................................................................................TGACGTCTCTTTATTCCGCAG.................................................. 21 0 1 1.00 1 0 0 1 0 0
..............................................................TGGAAATAAAGTACTGTC............................................................................... 18 0 1 1.00 1 0 1 0 0 0
............................................................................................................................AACAAATACTTTGTGGATGGCTC............ 23 0 1 1.00 1 0 1 0 0 0
........................................................................GGACTTTCAGCTTTACGGACGTC................................................................ 23 3 1 1.00 1 0 0 0 0 1
...........................................................................................................................CAACAAATACTTTGTGGATGGCTCTCC......... 27 0 1 1.00 1 1 0 0 0 0
.............................AACAACGCCACCTGGCAGAATCGAAT........................................................................................................ 26 3 1 1.00 1 0 0 1 0 0
...........GACAACTTCGATGCTAGCAACAACG........................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0
..............................................................TGGAAATAAAGTACTGTCAGCTTTAC....................................................................... 26 0 1 1.00 1 0 0 1 0 0
..............AACTTCGATGCTAGCAACA.............................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0
......AATTAGACAACTTCGATGCTAGCAA................................................................................................................................ 25 0 1 1.00 1 1 0 0 0 0
................................................................................................................ATCTACATCAACAACAAATACTTTGT..................... 26 0 1 1.00 1 0 1 0 0 0
..........................................................................................................................ACAACAAATACTTTGTGGATGG............... 22 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................TACTTTGTGGATGGCTCTCCC........ 21 0 1 1.00 1 1 0 0 0 0
................................................................................AGCTTTACTGACGTCTCTTTATTCCG..................................................... 26 0 1 1.00 1 0 0 1 0 0
...............ACTTCGATGCTAGCAACAACGCCAC....................................................................................................................... 25 0 1 1.00 1 0 0 1 0 0
...........................GCAACAACGCCACCTGGCAGAAT............................................................................................................. 23 0 1 1.00 1 1 0 0 0 0
..................TCGATGCTAGCAACAACGCCACCT..................................................................................................................... 24 0 1 1.00 1 0 1 0 0 0
........TTAGACAACTTCGATGCTA.................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0
................................................................................................................................AATACTTTGTGGATGGCTCTCCCATCT.... 27 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................AAATACTTTGTTGATGGCTCTCC......... 23 1 1 1.00 1 1 0 0 0 0
.............................................................CTGGAAATAAAGTACTGTCAGCTT.......................................................................... 24 0 1 1.00 1 0 0 1 0 0
..................................................................................................................CTACATCAACAACAAATACTTTGT..................... 24 0 1 1.00 1 0 1 0 0 0
........................................................................................................................CAACAACAAATACTTTGTGGATGGCT............. 26 0 1 1.00 1 0 1 0 0 0
..................................................................................................................................TACTTTGTGGATGTCTCTCC......... 20 1 1 1.00 1 0 0 1 0 0
........................CTAGCAACAACGCCACCTGGCAGAATCG........................................................................................................... 28 2 1 1.00 1 1 0 0 0 0
..................TCGATGCTAGCAACAACGCCACCTGGC.................................................................................................................. 27 0 1 1.00 1 0 0 0 1 0
.............CAACTTCGATGCTAGCAACAA............................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0
...................................................................................................................................ACTTTGTGGATGGCTCTCCCA....... 21 0 1 1.00 1 0 1 0 0 0
........TTAGACAACTTCGATGCTAGCAACAACGC.......................................................................................................................... 29 0 1 1.00 1 1 0 0 0 0
...............................................................................................................................AAACACTTTGTGGATGGCT............. 19 1 1 1.00 1 1 0 0 0 0
..............................................................TGGAAATAAAGTACTGTCAGCTTTTC....................................................................... 26 1 1 1.00 1 0 0 1 0 0
.............................................................CTGGAAATAAAGTACTGTCAGCTTT......................................................................... 25 0 1 1.00 1 0 0 1 0 0
..............................................................TGGAAATAAAGTACTGTCAGCTTTA........................................................................ 25 0 1 1.00 1 0 0 1 0 0
.................TGCGATGCTAGCAACAACGCCACCT..................................................................................................................... 25 1 1 1.00 1 1 0 0 0 0
.....................................................................................................................CATCAACAACAAATACTTTGTGGAT................. 25 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................ATACTTTGTGGATGGCTCTCCCA....... 23 0 1 1.00 1 1 0 0 0 0
................................................................................................................................AATACTTTGTGGATGGCTCTCCAAT...... 25 1 1 1.00 1 0 1 0 0 0
...........GACAACTTCTATGCTATCAACAAC............................................................................................................................ 24 2 1 1.00 1 0 1 0 0 0
...............................................................................................................................AAATACATTGTGGATGGCTCTCC......... 23 1 1 1.00 1 0 1 0 0 0
..................................................................................................................................TACTTTGTGGATGGCTCT........... 18 0 1 1.00 1 0 1 0 0 0
................................................ATGTAAGGACTAGCTGGAAATAAA....................................................................................... 24 0 1 1.00 1 1 0 0 0 0
................................................................................................................................AATACTTTTTGGATGGCT............. 18 1 2 0.50 1 0 1 0 0 0
...................................................................................................................TACCTCAACCACATATACTT........................ 20 3 7 0.14 1 0 0 0 0 1
..........AGACAACTAGGATGTTAGC.................................................................................................................................. 19 3 11 0.09 1 1 0 0 0 0

Anti-sense strand reads

GGGTCTTTAATCTGTTGAAGCTACGATCGTTGTTGCGGTGGACCGTCTTACATTCCTGATCGACCTTTATTTCATGACAGTCGAAATGACTGCAGAGAAATAAGGCGTCGCTTAGATGTAGTTGTTGTTTATGAAACACCTACCGAGAGGGTAGAAATA
**************************************************.(((((.(((((...((((((.....))))))...))))))))))...************************************************************* 		Read size # Mismatch Hit Count Total Norm Total M055
female body
...........................................CGTCTTACATTCCTGATCGAC............................................................................................... 21 0 1 1.00 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4770:6415071-6415229 - der_566 CCCAGAAATTAGACAACTTCGATGCTAGCAACAACGCCACCTGGCAGAATGTAAGGACTAGCT-----GGAA----------ATAAAG---------TACTGTCAGCTT------------------TACT--------------GAC-GTCTCTTTATTCCGCAGCGAATCTACATCAACAACAAATACTTTGTGGATGGCTCTCCCATCTTTAT
droYak3 3R:3943909-3944067 + CCCAGAAACTGGACAACTTTGATGATAGCAACAACGCCACCTGGCAGGATGTAAGGATAAGCT-----TGAA----------ATGAAG---------TATAGTCAGCTT------------------TACT--------------AAA-GTTCTTTTACTTCGCAGCGAATCTATATTAATAACAAGTACTTTGTGGATGGCTCTCCCATCTTCAT
droSec2 scaffold_25:549093-549251 - CCCAAAAACTAGACAACTTCGATGATAGCAACAACGCCACCTGGCAGGATGTAATGATTATCT-----TCAA----------ACTAAG---------TATGTTAAGCTT------------------TACT--------------AAC-GTCTTCCTGTTCCATAGCGAATCTATATCAACAACAAGTACTTCGTTGATGGCTCTCCCATCTTTAT
droSim2 3r:6039958-6040116 - CCCAAAAACTAGACAACTTCGATGATAGCAACAACGCCACCTGGCAGGATGTAAGGATTAGCT-----TTAT----------ACTAAG---------TATGGTACGCTT------------------CACT--------------AAC-GTCTTCCTGTTTCTTAGCGAATCTATATCAACAACAAGTACTTCGTTGATGGCTCTCCCATCTTTAT
dm3 chr3R:15219270-15219431 + CCCAGAAACTAGATAACTTCGATGACAGCAACAACGCCACCTGGCAGGATGTAAGGATTGGCT-----TCAC----------ATAAAG---------TATGGTCAGCTT------------------TATT-CAT----------AGC-TTTATTTTATTCCCTAGCGAATCTATATCAACAACAAGTACTTCGTTGATGGCTCTCCCATCTTTAT
droEug1 scf7180000409804:1494762-1494921 + CCCAAAAGCTGGACAACTTCGATGATAGCAACAATGCCACCTGGCTTGATGTAAGGACCTG-------------------------AGCGTTAGCCCTATGGTTAGCGT------------------TATA--T-----------AATTTATTTTCTATTCCCTAGCGCATCTATATCAACAATAAGTACTTCGTTGATGGCTCTCCCATCTTCAT
droBia1 scf7180000302402:987041-987210 + CCCAAAAGCTGGACAACTTCGATGATAGCAACAACGCCACCTGGCAGGACGTAAGGGTCGACT-----CGGATGCGACATTAATCAAG---------GG---TAACCTT------------------CTTTAACT----------ATC-TCTCCTTCAATCCCCAGCGCATTTACATCAACAACAAGTACTTTGTGGATGGCTCCCCCATCTTCGT
droTak1 scf7180000410451:252293-252462 + CCCAAAAGTTGGATAACTTCGATGATAGCAACAATGCCACCTGGCTGGATGTAAGGATCAAAT-----CAAAATCGCTATTAATC-AG---------AAT------------TT----ACCTTCTAT----AACT----------ACC-TCTCTTTGAACCCTTAGCGCATATATATCAACAACAAGTATTTTAAAGATGGAAATCCCATATTTAT
droEle1 scf7180000490994:1010433-1010592 + CCCAAAAGCTGGACAACTTCGACAAAAGCAACAATGCCACCTGGCAGAATGTAAGGATCTGCT-----GACT----------ATCAAG---------TGT------------TTATTT---------TGCTAACT----------TTG-CTAATTTTCAATCCTAGCTGGTCTATATCAACAACAAGTATTTTAAAGATGGCTCTCCCATCTTTAT
droRho1 scf7180000760408:4234-4394 - CCCAAAAGCTGGACAACTTCGATGATAGCAACAATGCCACCTGGCAGGATGTAAGGACGTGCT-----GAAA----------ATCGAG---------TGT------------TA----ACCAACTAT----AACT----------ATC-TCGTTTTCAAACCTCAGCTCATCTATATAAACAATAAGTATTTTAAAGATGGCTCTCCCATCTTTAT
droFic1 scf7180000454126:210471-210630 + CCCAAAAGCTGGACAATTTTGACGATAGCAACAATGCCACATGGCAGGATGTAAGATTCTTAC-----GAAG----------CTTTAG---------TATACTTCTCTA------------------CT---CCA----------ACT-CTTATTTTGTTCCTTAGCGCGTCTATATCAACACTAAGTACTTTGTTGATGGCAACCCCATTTTCAT
droKik1 scf7180000302707:448842-448999 + ACCAGTGGCTGGACAATTTTGATGAGCAAAACAACGCAACTTGGAAGGACGTAAGTACTTTCA-----AA---------------AAGTGTAA----TG-ACCAAACAA------------------TACT--------------ATC-TTTGTCGTATCTTCCAGCGCATCTTCATCAACGAGCGCTACTTTGTCGACGGTTCCCCCATTTTCAT
droAna3 scaffold_13340:15169663-15169820 - CCCAGAAGTTAGACAACTTCGACGACGACAACAATGCGACTTGGAGTGATGTAAGAATCCTCAGAGTTTAAG----------ATAAAG---------T----TAAGCTT------------------TATT--------------AGT-TT--GATTCCTTACCAGCGCATCTATATCAACGAGAAACATTTTGTCGATGGTTCCCCTATCTTCAT
droBip1 scf7180000396708:4859444-4859597 + CCCAGAAGTTGGACAACTTTGATGACAACAACAATGCCACTTGGAAGGATGTAGGATCCTA---------------------AGGATC---------TAAGGTATCCCT------------------TATC-ATT----------ACC-CT--TTTTTTTTACCAGCGCATCCTGATCAACGAGAAGCACTTTGTCGAGGGATCGCCCATCTTCAT
dp5 Unknown_singleton_832:1970-2129 + CCCTTAAGCTGGATAACTTCAATGCCGCCAACAATGCCACATGGAAAGATGTGTGAATCGGAA-----AGCA-----------------------------GTCGCCTT--TAAACCA---------AGCTAACA----------ATC-TTGTATGTAATCTTTAGCGCGTGCTGATCAACGAGGATCACTTTACGGATGGATCCCCCATCTTCAT
droPer2 scaffold_6:5050338-5050493 + CACAGAAATTGGATAACTTCGATGATGACAACAAGGAGACCTACGAAATGGTATGTCCA---------------------------AG---------GA----ATCCCC------------------TTTC-ATAGTGGAACCCTTTT-CATGGTTTCGTTTTTAGCGTTATCTGGTCAACGATGAGTTCCAAGAGGAGGGTAGCCCCATCTTCAT
droWil2 scf2_1100000004943:4003337-4003505 + CCCAGTATCTAGACAATTTTGATGCTAGTAATAATGCTACCTGGCAGAATGTAAGATCCTTGA-----TC---------------GAGAATAAGACATACA--AATAAAAGTCA----ACTAATA--------------------ATA-ATTCTCAAATCTTGCAGCGCTACATGATCAACGAAGATTACTATGTGGAGGGATCACCCATTTTTGT
droVir3 scaffold_13047:16407427-16407586 - GCCAGAAATTGGACAACTTTAACGTATCAAATGAGGAAGTGTGGGACGATGTAAGTTTTTTTT-----AACATTTT------ATGAAA---------AACAATGATCCT------------------GAAG--------------AAC-TT---ATTTGGTTTCAGCGTGTGCTGATCAACGAGGATTACTTCGTAGATGGTTCTCCAATCTTCAT
droMoj3 scaffold_6540:12724302-12724456 - ATCAGAGCCTGGACAACTTTGACGACACTAACAAGAACGTGTGGGACCAAGTGAGTTCGGTAG-----TTCC----------TTAAAG---------GAATTCAATCTT------------------GTCT--------------AAC-----TTATCTTCTTCAGCGTGTTTTGATCAACGAAGACAACTTTGTAGATGGTTCACCCATTTTTAT
droGri2 scaffold_15116:1335132-1335288 - GTCAGAAACTGGACAATTTTGACGAAGGCAATGAGGAAGTCTGGGATGATGTAAGATGTGATT-------AT----------AAGATT---------TCTGGCCACTTT------------------AACC--------------ACA-GTGATCTTTAATTTTAGCGCGTATTGATCAATGAGGACTACTTCGTAGATGGTTCCCCAATCTTCAT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
CCCAGAAATTAGACAACTTCGATGCTAGCAACAACGCCACCTGGCAGAATGTAAGGACTAGCT-----GGAA----------ATAAAG---------TACTGTCAGCTT------------------TACT--------------GAC-GTCTCTTTATTCCGCAGCGAATCTACATCAACAACAAATACTTTGTGGATGGCTCTCCCATCTTTATSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.........................................................................................................................................................................................AATACTTTGTGGATGGCTCTCC.........22120.002020001440
........................................................................................................................................................................................AAATACTTTGTGGATGGCTCTCC.........23115.001530001020
..........................................................................................................................................................................................ATACTTTGTGGATGGCTCTCC.........21113.001300101110
.....................................................................................................................................................................................AACAAATACTTTGTGGATGGCTCTCC.........2617.0072000500
........................................................................................................................................................................................AAATACTTTGTGGATGGCT.............1917.0071000240
...........................................................................................................................................................................................TACTTTGTGGATGGCTCTCC.........2016.0062000220
.............................................................CT-----GGAA----------ATAAAG---------TACTGTCAGCT............................................................................................................2316.0062000400
.......ATTAGACAACTTCGATGCTAGC...........................................................................................................................................................................................2215.0053000110
.............................................................CT-----GGAA----------ATAAAG---------TACTGTC................................................................................................................1914.0043000100
.........................................................................................................................................................................................AATACTTTGTGGATGGCT.............1814.0040000040
..........................................................................................................................................................................................ATACTTTGTGGATGGCTCTCCC........2214.0041000210
.............................................................CT-----GGAA----------ATAAAG---------TACTGTCAGC.............................................................................................................2214.0043000100
........................................................................................................................................................................................AAATACTTTGTGGATGGCTCTCCC........2414.0040000130
......AATTAGACAACTTCGATGCT..............................................................................................................................................................................................2014.0041000210
..........................................................................................................................................................................................ATACTTTGTGGATGGCTCT...........1914.0040000130
.....................................................................................................................................................................................AACAAATACTTTGTGGATGGCT.............2214.0040000220
...................................................................................................................................................................................ACAACAAATACTTTGTGGATGGCT.............2414.0040000400
.............................................................CT-----GGAA----------ATAAAG---------TACTGTCAGCTT------------------TA.......................................................................................2613.0031000200
............................................................................................................................................................................................ACTTTGTGGATGGCTCTCCC........2013.0031000020
.....................................................................................................................................................................................AACAAATACTTTGTGGATGGCTCTCCC........2713.0032000100
......AATTAGACAACTTCGATGCTAGC...........................................................................................................................................................................................2313.0030000030
..........AGACAACTTCGATGCTAGC...........................................................................................................................................................................................1913.0031000020
.............................................................CT-----GGAA----------ATAAAG---------TACTGTCAGCTT------------------TAC......................................................................................2712.0020000110
............ACAACTTCGATGCTAGCAAC........................................................................................................................................................................................2012.0020000200
..............AACTTCGATGCTAGCAACAACGC...................................................................................................................................................................................2312.0021000100
........................................................................................................................................................................................AAATACTTTGTGGATGGCTC............2012.0020000200
...............ACTTCGATGCTAGCAACAACGC...................................................................................................................................................................................2212.0020000110
.............................................................CT-----GGAA----------ATAAAG---------TACTGTCAG..............................................................................................................2112.0021000100
...........................GCAACAACGCCACCTGGCAGAATCG....................................................................................................................................................................2512.0022000000
...........GACAACTTCGATGCTAGC...........................................................................................................................................................................................1812.0021000010
....GAAATTAGACAACTTCGATGCTA.............................................................................................................................................................................................2312.0020000200
...................CGATGCTAGCAACAACGC...................................................................................................................................................................................1812.0020000020
..........AGACAACTTCGATGCTAG............................................................................................................................................................................................1812.0020000020
......AATTAGACAACTTCGATGCTA.............................................................................................................................................................................................2112.0020000200
......................................................................................................................................................................................ACAAATACTTTGTGGATGGCT.............2112.0020000110
.......ATTAGACAACTTCGATGCT..............................................................................................................................................................................................1912.0020000200
.............CAACTTCGATGCTAGCAACAACGC...................................................................................................................................................................................2412.0020000020
...........................GCAACAACGCCACCTGGCAGA........................................................................................................................................................................2112.0021000010
..................................................................................................................................................................................AACAACAAATACTTTGTGGATGGCT.............2512.0020000110
........TTAGACAACTTCGATGCTAGC...........................................................................................................................................................................................2111.0010000100
CCCAGAAATTAGACAACTTCGAT.................................................................................................................................................................................................2311.0010000100
...AGAAATTAGACAACTTCGAT.................................................................................................................................................................................................2011.0010000100
.....................ATGCTAGCAACAACGCCACCT..............................................................................................................................................................................2111.0011000000
.......ATTAGACAACTTCGATGCTAGCAACAA......................................................................................................................................................................................2711.0010000100
.....................................................................................................................................................................................AACAAATACTTTGTGGATGG...............2011.0010000010
..............AACTTCGATGCTAGCAACAACGCCACCT..............................................................................................................................................................................2811.0010000100
.............CAACTTCGATGCTAGCAACAACGCCACCT..............................................................................................................................................................................2911.0011000000
...........GACAACTTCGATGCTAGCAA.........................................................................................................................................................................................2011.0010000100
............................................................GCT-----GGAA----------ATAAAG---------TACTGTCAG..............................................................................................................2211.0011000000
........................................................................................................AGCTT------------------TACT--------------GAC-GTCTCTTTATTCCGCA...................................................2811.0011000000
..................TCGATGCTAGCAACAACGC...................................................................................................................................................................................1911.0011000000
....................................................................GGAA----------ATAAAG---------TACTGTCAGCTT------------------TA.......................................................................................2411.0011000000
.............................................................................................................................................................................................CTTTGTGGATGGCTCTCCC........1911.0010000100
..............AACTTCGATGCTAGCAACAACGCCACC...............................................................................................................................................................................2711.0010000010
....................................................................................................................................................................................CAACAAATACTTTGTGGATGGCTCTCCC........2811.0010000010
..................................................GTAAGGACTAGCT-----GGAA----------AT....................................................................................................................................1911.0010000010
.................TTCGATGCTAGCAACAACGCCACCTGGCA..........................................................................................................................................................................2911.0010000010
..........................................................................................................................................................................................ATACTTTGTGGATGGCTCTC..........2011.0010000100
...................................................................................................................................................................................ACAACAAATACTTTGTGGATGGCTCTCC.........2811.0011000000
............................CAACAACGCCACCTGGCAGAAT......................................................................................................................................................................2211.0011000000
..........................................................................................................................................................................................ATACTTTGTGGATGGCTCTCCCAT......2411.0010000010
.......ATTAGACAACTTCGATGCTA.............................................................................................................................................................................................2011.0010000100
..................................................................................................................................................................................AACAACAAATACTTTGTGGATGGCTCTC..........2811.0010000010
.........................................................................................................................................................................................AATACTTTGTGGATGGCTCTCCC........2311.0010000100
.......................................................................................................................................................................................CAAATACTTTGTGGATGGCTCTCC.........2411.0010000100
..................................................................................................................................................................................AACAACAAATACTTTGTGGATGGCTCTCC.........2911.0010000100
........................................................................................................................................................................................AAATACTTTGTGGATGGCTCTC..........2211.0010000010
........................CTAGCAACAACGCCACCTGGCAGA........................................................................................................................................................................2411.0010000010
..................TCGATGCTAGCAACAACGCCA.................................................................................................................................................................................2111.0011000000
...................CGATGCTAGCAACAACGCC..................................................................................................................................................................................1911.0010000010
......................................................................................................................................................................CGAATCTACATCAACAACA...............................1911.0010010000
................CTTCGATGCTAGCAACAAC.....................................................................................................................................................................................1911.0010000010
.............................AACAACGCCACCTGGCAGA........................................................................................................................................................................1911.0011000000
...........................GCAACAACGCCACCTGGCAGAATC.....................................................................................................................................................................2411.0010000100
...........GACAACTTCGATGCTAGCAACAACGC...................................................................................................................................................................................2611.0010000100
...........GACAACTTCGATGCTAGCAAC........................................................................................................................................................................................2111.0010000100
...............................CAACGCCACCTGGCAGAATCG....................................................................................................................................................................2111.0010000100
..............................................................T-----GGAA----------ATAAAG---------TACTGTCAGCTT------------------T........................................................................................2411.0011000000
...........GACAACTTCGATGCTAGCAACA.......................................................................................................................................................................................2211.0010000100
.......ATTAGACAACTTCGATGCTAGCAACA.......................................................................................................................................................................................2611.0010000100
..................................................................................................................................T--------------GAC-GTCTCTTTATTCCGCAG..................................................2111.0011000000
..............................................................T-----GGAA----------ATAAAG---------TACTGTC................................................................................................................1811.0010000010
.....................................................................................................................................................................................AACAAATACTTTGTGGATGGCTC............2311.0010000010
....................................................................................................................................................................................CAACAAATACTTTGTGGATGGCTCTCC.........2711.0010000100
...........GACAACTTCGATGCTAGCAACAACG....................................................................................................................................................................................2511.0010000010
..............................................................T-----GGAA----------ATAAAG---------TACTGTCAGCTT------------------TAC......................................................................................2611.0011000000
..............AACTTCGATGCTAGCAACA.......................................................................................................................................................................................1911.0010000100
......AATTAGACAACTTCGATGCTAGCAA.........................................................................................................................................................................................2511.0010000100
.........................................................................................................................................................................ATCTACATCAACAACAAATACTTTGT.....................2611.0010000010
...................................................................................................................................................................................ACAACAAATACTTTGTGGATGG...............2211.0010000100
...........................................................................................................................................................................................TACTTTGTGGATGGCTCTCCC........2111.0010000100
........................................................................................................AGCTT------------------TACT--------------GAC-GTCTCTTTATTCCG.....................................................2611.0011000000
...............ACTTCGATGCTAGCAACAACGCCAC................................................................................................................................................................................2511.0011000000
...........................GCAACAACGCCACCTGGCAGAAT......................................................................................................................................................................2311.0010000100
..................TCGATGCTAGCAACAACGCCACCT..............................................................................................................................................................................2411.0010000010
........TTAGACAACTTCGATGCTA.............................................................................................................................................................................................1911.0010000100
.........................................................................................................................................................................................AATACTTTGTGGATGGCTCTCCCATCT....2711.0010000100
.............................................................CT-----GGAA----------ATAAAG---------TACTGTCAGCTT------------------.........................................................................................2411.0011000000
...........................................................................................................................................................................CTACATCAACAACAAATACTTTGT.....................2411.0010000010
.................................................................................................................................................................................CAACAACAAATACTTTGTGGATGGCT.............2611.0010000010
........................CTAGCAACAACGCCACCTGGCAGAATCG....................................................................................................................................................................2811.0010000100
..................TCGATGCTAGCAACAACGCCACCTGGC...........................................................................................................................................................................2711.0010010000
.............CAACTTCGATGCTAGCAACAA......................................................................................................................................................................................2111.0010000100
............................................................................................................................................................................................ACTTTGTGGATGGCTCTCCCA.......2111.0010000010
........TTAGACAACTTCGATGCTAGCAACAACGC...................................................................................................................................................................................2911.0010000100
.............................................................CT-----GGAA----------ATAAAG---------TACTGTCAGCTT------------------T........................................................................................2511.0011000000
..............................................................T-----GGAA----------ATAAAG---------TACTGTCAGCTT------------------TA.......................................................................................2511.0011000000
..............................................................................................................................................................................CATCAACAACAAATACTTTGTGGAT.................2511.0010000100
..........................................................................................................................................................................................ATACTTTGTGGATGGCTCTCCCA.......2311.0010000100
...........................................................................................................................................................................................TACTTTGTGGATGGCTCT...........1811.0010000010
................................................ATGTAAGGACTAGCT-----GGAA----------ATAAA.................................................................................................................................2411.0010000100
droYak3
CCCAGAAACTGGACAACTTTGATGATAGCAACAACGCCACCTGGCAGGATGTAAGGATAAGCT-----TGAA----------ATGAAG---------TATAGTCAGCTT------------------TACT--------------AAA-GTTCTTTTACTTCGCAGCGAATCTATATTAATAACAAGTACTTTGTGGATGGCTCTCCCATCTTCATSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..CAGAAACTGGACAACTTTGAT.................................................................................................................................................................................................2121.00220000000000
...........................................................................................................................................................................CTATATTAATAACAAGTACTTTGTGGAT.................2821.00220000000000
............................CAACAACGCCACCTGGCAGGAT......................................................................................................................................................................2220.50101000000000
.......................GATAGCAACAACGCCACCTGGCAGG........................................................................................................................................................................2520.50110000000000
.......ACTGGACAACTTTGATGATAGCAA.........................................................................................................................................................................................2420.50100000010000
.......ACTGGACAACTTTGATGATAGC...........................................................................................................................................................................................2220.50110000000000
................................................................................................................................................................................TTAATAACAAGTACTTTGT.....................1920.50101000000000
.........................................................................................................................................................................................AGTACTTTGTGGATGGCTCT...........2020.50100000010000
......AACTGGACAACTTTGATGATAGC...........................................................................................................................................................................................2320.50110000000000
......................................................................................................................................................................CGAATCTATATTAATAACAAGTACTTTGT.....................2920.50100000010000
..............................................................................................................................................................................................TTTGTGGATGGCTCTCCCAT......2020.50100000010000
..........................................................AAGCT-----TGAA----------ATGAAG---------TATAGTCAGC.............................................................................................................2520.50100000010000
......................................................................................................................................................................................ACAAGTACTTTGTGGATGGCTC............2220.50100000010000
.......................................................................................................................................................................GAATCTATATTAATAACAAGTACTTTGT.....................2820.50100000010000
.......................................................................................................................................................................................CAAGTACTTTGTGGATGGCTCTC..........2320.50101000000000
....GAAACTGGACAACTTTGATGATAGCAAC........................................................................................................................................................................................2820.50110000000000
....GAAACTGGACAACTTTGATGATAGC...........................................................................................................................................................................................2520.50110000000000
.......ACTGGACAACTTTGATGATAG............................................................................................................................................................................................2120.50110000000000
...AGAAACTGGACAACTTTGAT.................................................................................................................................................................................................2020.50110000000000
...AGAAACTGGACAACTTTGATGATA.............................................................................................................................................................................................2420.50110000000000
...........................................................................................................................................................................CTATATTAATAACAAGTACTTTGT.....................2420.50100000010000
........................................................................................................................................................................................AAGTACTTTGTGGATGGCT.............1920.50100000010000
..................................................................................................................................................AA-GTTCTTTTACTTCGCAGCGAATC............................................2520.50100000010000
...............................CAACGCCACCTGGCAGGATC.....................................................................................................................................................................2020.50110000000000
..........GGACAACTTTGATGATAGC...........................................................................................................................................................................................1920.50110000000000
...AGAAACTGGACAACTTTGG..................................................................................................................................................................................................1920.50110000000000
droSec2
CCCAAAAACTAGACAACTTCGATGATAGCAACAACGCCACCTGGCAGGATGTAATGATTATCT-----TCAA----------ACTAAG---------TATGTTAAGCTT------------------TACT--------------AAC-GTCTTCCTGTTCCATAGCGAATCTATATCAACAACAAGTACTTCGTTGATGGCTCTCCCATCTTTATSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.............................AACAACGCCACCTGGCAGGATC.....................................................................................................................................................................2213.0031200
.............................................................................................................................................................................ATATCAACAACAAGTACTTCGTT....................2313.0031200
...........................................................................................................................................................................CTATATCAACAACAAGTACTTCGTTG...................2612.0020200
..........................................................................................................................................................................................GTACTTCGTTGATGGCTCTCCCAT......2412.0021100
...........GACAACTTCGATGATAGCAA.........................................................................................................................................................................................2012.0020200
........................ATAGCAACAACGCCACCTGGCAGGAT......................................................................................................................................................................2612.0021100
............................................................................................................................................................................................ACTTCGTTGATGGCTCTCCCAT......2212.0021100
..CAAAAACTAGACAACTTCGAT.................................................................................................................................................................................................2111.0010100
...............................................................................................................................................................................ATCAACAACAAGTACTTCGT.....................2011.0010100
.............................AACAACGCCACCTGGCAGGATCG....................................................................................................................................................................2311.0010100
.................TTCGATGATAGCAACAACGCC..................................................................................................................................................................................2111.0010100
...........GACAACTTCGATGATAGCAAC........................................................................................................................................................................................2111.0010100
..................................................................................................................................................................................AACAACAAGTACTTCGTTGATGGCTCT...........2711.0010100
........................................................................................................................................................................AATCTATATCAACAACAAGTACTTCGTTG...................2911.0010100
..CAAAAACTAGACAACTTCG...................................................................................................................................................................................................1911.0010100
.........TAGACAACTTCGATGATAGCA..........................................................................................................................................................................................2111.0010100
...AAAAACTAGACAACTTCGATG................................................................................................................................................................................................2111.0010100
........................ATAGCAACAACGCCACCTGG............................................................................................................................................................................2011.0010100
.............................................................................................................................................................................................CTTCGTTGATGGCTCTCCCAT......2111.0010001
......AACTAGACAACTTCGATGATAGCAACA.......................................................................................................................................................................................2711.0010100
...........................................................................................................................................................................CTATATCAACAACAAGTACTTCGTT....................2511.0011000
...............................CAACGCCACCTGGCAGGATCG....................................................................................................................................................................2111.0010100
...........................................................................................................................................................................................TACTTCGTTGATGGCTCTCCCAT......2311.0010100
...............................................................................................................................................................................ATCAACAACAAGTACTTCGTT....................2111.0010100
.........................TAGCAACAACGCCACCTGG............................................................................................................................................................................1911.0011000
.CCAAAAACTAGACAACTTCG...................................................................................................................................................................................................2011.0010100
...........GACAACTTCGATGATAGCAACA.......................................................................................................................................................................................2211.0010100
...............................................................................................................................................................................ATCAACAACAAGTACTTCGTTGAT.................2411.0011000
..........................AGCAACAACGCCACCTGGCAGGATC.....................................................................................................................................................................2511.0010100
....................................................................................................................................................................................CAACAAGTACTTCGTTGATGGCT.............2311.0010100
....................................................................................................................................................................................CAACAAGTACTTCGTTGAT.................1911.0010001
..........AGACAACTTCGATGATAGCAA.........................................................................................................................................................................................2111.0010100
......AACTAGACAACTTCGATGAT..............................................................................................................................................................................................2011.0010100
.............................................................................................................................................................................ATATCAACAACAAGTACTTCGT.....................2211.0010100
.............................................................................................................................................................................ATATCAACAACAAGTACTTCGTTG...................2411.0011000
droSim2
CCCAAAAACTAGACAACTTCGATGATAGCAACAACGCCACCTGGCAGGATGTAAGGATTAGCT-----TTAT----------ACTAAG---------TATGGTACGCTT------------------CACT--------------AAC-GTCTTCCTGTTTCTTAGCGAATCTATATCAACAACAAGTACTTCGTTGATGGCTCTCCCATCTTTATSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
....................................................................................................................................................................................CAACAAGTACTTCGTTGATGGCT.............2311.00101000000000000000
........................................................................................................................................................................................AAGTACTTCGTTGATGGCTCTCC.........2311.00100100000000000000
..................................................................................................................................................................................AACAACAAGTACTTCGTTGATGGCT.............2511.00100100000000000000
.....................................................................................................................................................................................AACAAGTACTTCGTTGATG................1911.00100010000000000000
dm3
CCCAGAAACTAGATAACTTCGATGACAGCAACAACGCCACCTGGCAGGATGTAAGGATTGGCT-----TCAC----------ATAAAG---------TATGGTCAGCTT------------------TATT-CAT----------AGC-TTTATTTTATTCCCTAGCGAATCTATATCAACAACAAGTACTTCGTTGATGGCTCTCCCATCTTTATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
.....................................................................................................................................................................................AACAAGTACTTCGTTGATGGCT.............2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................AAGTACTTCGTTGATGGCTCTCCC........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....GAAACTAGATAACTTCGAT.................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................CAACGCCACCTGGCAGGT.......................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................AACAAGTACTTCGTTGATGGCTC............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................AGTACTTCGTTGATGGCT.............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000
.............................................................................................................................................................................ATATCAACAACAAGTACTTCGTTG...................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................AACAAGTACTTCGTTGATGGC..............2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................CAACAACAAGTACTTCGTT....................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................TATATCAACAACAAGTACTTCGTTG...................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...............................CAACGCCACCTGGCAGGATCGT...................................................................................................................................................................2220.5010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................AACGCCACCTGGCAGGATCGT...................................................................................................................................................................2130.3310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................................................................................................GGTCAGCTT------------------TATT-CAT----------AGA-GG.................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
droEug1
CCCAAAAGCTGGACAACTTCGATGATAGCAACAATGCCACCTGGCTTGATGTAAGGACCTG-------------------------AGCGTTAGCCCTATGGTTAGCGT------------------TATA--T-----------AATTTATTTTCTATTCCCTAGCGCATCTATATCAACAATAAGTACTTCGTTGATGGCTCTCCCATCTTCATSizeHit CountTotal NormTotal
No Reads
droBia1
CCCAAAAGCTGGACAACTTCGATGATAGCAACAACGCCACCTGGCAGGACGTAAGGGTCGACT-----CGGATGCGACATTAATCAAG---------GG---TAACCTT------------------CTTTAACT----------ATC-TCTCCTTCAATCCCCAGCGCATTTACATCAACAACAAGTACTTTGTGGATGGCTCCCCCATCTTCGTSizeHit CountTotal NormTotal
No Reads
droTak1
CCCAAAAGTTGGATAACTTCGATGATAGCAACAATGCCACCTGGCTGGATGTAAGGATCAAAT-----CAAAATCGCTATTAATC-AG---------AAT------------TT----ACCTTCTAT----AACT----------ACC-TCTCTTTGAACCCTTAGCGCATATATATCAACAACAAGTATTTTAAAGATGGAAATCCCATATTTATSizeHit CountTotal NormTotal
No Reads
droEle1
CCCAAAAGCTGGACAACTTCGACAAAAGCAACAATGCCACCTGGCAGAATGTAAGGATCTGCT-----GACT----------ATCAAG---------TGT------------TTATTT---------TGCTAACT----------TTG-CTAATTTTCAATCCTAGCTGGTCTATATCAACAACAAGTATTTTAAAGATGGCTCTCCCATCTTTATSizeHit CountTotal NormTotal
No Reads
droRho1
CCCAAAAGCTGGACAACTTCGATGATAGCAACAATGCCACCTGGCAGGATGTAAGGACGTGCT-----GAAA----------ATCGAG---------TGT------------TA----ACCAACTAT----AACT----------ATC-TCGTTTTCAAACCTCAGCTCATCTATATAAACAATAAGTATTTTAAAGATGGCTCTCCCATCTTTATSizeHit CountTotal NormTotal
No Reads
droFic1
CCCAAAAGCTGGACAATTTTGACGATAGCAACAATGCCACATGGCAGGATGTAAGATTCTTAC-----GAAG----------CTTTAG---------TATACTTCTCTA------------------CT---CCA----------ACT-CTTATTTTGTTCCTTAGCGCGTCTATATCAACACTAAGTACTTTGTTGATGGCAACCCCATTTTCATSizeHit CountTotal NormTotal
No Reads
droKik1
ACCAGTGGCTGGACAATTTTGATGAGCAAAACAACGCAACTTGGAAGGACGTAAGTACTTTCA-----AA---------------AAGTGTAA----TG-ACCAAACAA------------------TACT--------------ATC-TTTGTCGTATCTTCCAGCGCATCTTCATCAACGAGCGCTACTTTGTCGACGGTTCCCCCATTTTCATSizeHit CountTotal NormTotal
No Reads
droAna3
CCCAGAAGTTAGACAACTTCGACGACGACAACAATGCGACTTGGAGTGATGTAAGAATCCTCAGAGTTTAAG----------ATAAAG---------T----TAAGCTT------------------TATT--------------AGT-TT--GATTCCTTACCAGCGCATCTATATCAACGAGAAACATTTTGTCGATGGTTCCCCTATCTTCATSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.......GTTAGACAACTTCGACGACGACAACA.......................................................................................................................................................................................2611.001100000
droBip1
CCCAGAAGTTGGACAACTTTGATGACAACAACAATGCCACTTGGAAGGATGTAGGATCCTA---------------------AGGATC---------TAAGGTATCCCT------------------TATC-ATT----------ACC-CT--TTTTTTTTACCAGCGCATCCTGATCAACGAGAAGCACTTTGTCGAGGGATCGCCCATCTTCATSizeHit CountTotal NormTotal
No Reads
dp5
CCCTTAAGCTGGATAACTTCAATGCCGCCAACAATGCCACATGGAAAGATGTGTGAATCGGAA-----AGCA-----------------------------GTCGCCTT--TAAACCA---------AGCTAACA----------ATC-TTGTATGTAATCTTTAGCGCGTGCTGATCAACGAGGATCACTTTACGGATGGATCCCCCATCTTCATSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.................................................................................................................................................................................CAACGAGGATCACTTTACGGATGGAT.............26216.003213000001000
......................................................................................................................................................................CGCGTGCTGATCAACGAGGAT.............................21213.002632100002000
......................................................................................................................................................................CGCGTGCTGATCAACGAGG...............................1929.001801700001000
.................................................................................................................................................................................CAACGAGGATCACTTTACGGATG................2326.001201100001000
.................................................................................................................................................................................CAACGAGGATCACTTTACGGATGG...............2424.5090900000000
.......................................................................................................................................................................GCGTGCTGATCAACGAGG...............................1824.5090900000000
...........................................................................................................................................................................................CACTTTACGGATGGATCCCCC........2124.5090800001000
...........................................................................................................................................................................................CACTTTACGGATGGATCCCCCAT......2323.0060600000000
.................................................................................................................................................................................CAACGAGGATCACTTTACGG...................2023.0060600000000
.......................................................................................................................................................................GCGTGCTGATCAACGAGGAT.............................2023.0060600000000
......................................................................................................................................................................CGCGTGCTGATCAACGAGGATCACT.........................2522.5050400001000
.................................................................................................................................................................................CAACGAGGATCACTTTACGGATGGA..............2522.5050500000000
...............................................................................................................................................................................................TTACGGATGGATCCCCCAT......1922.5050500000000
...........................................................................................................................................................................................CACTTTACGGATGGATCCCC.........2022.5050500000000
..................................................................................................................................................................................AACGAGGATCACTTTACGGATGGAT.............2522.5050500000000
.........................................................................................................................................................................................ATCACTTTACGGATGGATCCCCC........2322.0040400000000
.................................................................................................................................................................................CAACGAGGATCACTTTACGGAT.................2222.0041300000000
...............................................................................................................................................................................ATCAACGAGGATCACTTTACGGATG................2522.0040400000000
......................................................................................................................................................................CGCGTGCTGATCAACGAG................................1822.0040400000000
.............................AACAATGCCACATGGAAAGAT......................................................................................................................................................................2122.0040400000000
............................CAACAATGCCACATGGAAAGAT......................................................................................................................................................................2222.0040400000000
........................................................................................................................................................................................GATCACTTTACGGATGGAT.............1922.0040300001000
......................................................................................................................................................................CGCGTGCTGATCAACGAGGA..............................2022.0040200002000
..................................................................................................................................................................................AACGAGGATCACTTTACGGATG................2221.5030300000000
............................................................................................................................................................................................ACTTTACGGATGGATCCCCCAT......2221.5030300000000
.......................................................................................................................................................................................GGATCACTTTACGGATGGAT.............2021.0020200000000
..................................................................................................................................................................................AACGAGGATCACTTTACGG...................1921.0020200000000
..................................................................................................................................................................................AACGAGGATCACTTTACGGAT.................2121.0020200000000
..............................................................................................................................................................................GATCAACGAGGATCACTTTACGGATGG...............2721.0020200000000
........................................................................................................................................................................................GATCACTTTACGGATGGATCCCCC........2421.0020200000000
...TTAAGCTGGATAACTTCAATGCCGC............................................................................................................................................................................................2521.0020200000000
......................................................................................................................................................................................AGGATCACTTTACGGATG................1821.0020200000000
..............................................................................................................................................................................GATCAACGAGGATCACTTTACGGATG................2621.0020200000000
...............................CAATGCCACATGGAAAGATCGC...................................................................................................................................................................2221.0020200000000
..............................................................................................................................................................................GATCAACGAGGATCACTTTACGG...................2321.0020200000000
................................AATGCCACATGGAAAGATCGC...................................................................................................................................................................2121.0020100010000
...............................................................................................................................................................................ATCAACGAGGATCACTTTACGGATGGA..............2721.0020200000000
..........................GCCAACAATGCCACATGGAAAGAT......................................................................................................................................................................2421.0020200000000
........................................................................................................................................................................CGTGCTGATCAACGAGGAT.............................1921.0020200000000
...............................................................................................................................................................................ATCAACGAGGATCACTTTACGGATGGAT.............2821.0020200000000
.............................AACAATGCCACATGGAAAGATC.....................................................................................................................................................................2221.0020200000000
....TAAGCTGGATAACTTCAAT.................................................................................................................................................................................................1920.5010100000000
.........................................................................................................................................................................GTGCTGATCAACGAGGAT.............................1820.5010100000000
......................................................................................................................................................................CGCGTGCTGATCAACGAGGATCA...........................2320.5010100000000
...............................CAATGCCACATGGAAAGATC.....................................................................................................................................................................2020.5010000001000
.............................................................................................................................................................................................CTTTACGGATGGATCCCCCATCTT...2420.5010100000000
..................................................................................................................................................................................AACGAGGATCACTTTACGGATGGA..............2420.5010100000000
.........................................................................................................................................................................................ATCACTTTACGGATGGAT.............1820.5010100000000
.......................................................................................................................................................................................GGATCACTTTACGGATGG...............1820.5010100000000
...............................................................................................................................................................................ATCAACGAGGATCACTTTACGGAT.................2420.5010100000000
.....................................................................................................................................................................................GAGGATCACTTTACGGATG................1920.5011000000000
................................................................................................................................................................................TCAACGAGGATCACTTTACGGAT.................2320.5010100000000
............................................................................................................................................................................................ACTTTACGGATGGATCCCCC........2020.5010100000000
..........................GCCAACAATGCCACATGGAA..........................................................................................................................................................................2020.5010100000000
........................................................................................................................................................TATGTAATCTTTAGCGCGTGCTG.........................................2320.5010100000000
............................CAACAATGCCACATGGAAA.........................................................................................................................................................................1920.5010100000000
.............TAACTTCAATGCCGCCAACAATGC...................................................................................................................................................................................2420.5010100000000
.................................ATGCCACATGGAAAGATGT....................................................................................................................................................................1920.5010100000000
.......................................................................................................................................................GTATGTAATCTTTAGCGCGTGCT..........................................2320.5010100000000
...........................................GAAAGATGTGTGAATCGGAA-----AGCA-----------------------------GTC................................................................................................................2720.5010100000000
.............................AACAATGCCACATGGAAAGATCGC...................................................................................................................................................................2420.5010000001000
......................................................................................................................................................................................AGGATCACTTTACGGATGGAT.............2120.5010100000000
.................................................................................................................................................................................................ACGGATGGATCCCCCATCT....1920.5010100000000
..................................................................................................................................................................................AACGAGGATCACTTTACGGATGG...............2320.5010100000000
....................AATGCCGCCAACAATGCCACAT..............................................................................................................................................................................2220.5010100000000
...........................................................................................................................................................GTAATCTTTAGCGCGTGCT..........................................1920.5010100000000
.................................................................................................................................................................................CAACGAGGATCACTTTACG....................1920.5010100000000
.........................CGCCAACAATGCCACATGGAAAGATC.....................................................................................................................................................................2620.5010100000000
.......................................................................................................................................................GTATGTAATCTTTAGCGCGTGCTGAT.......................................2620.5010100000000
......................................................................................................................................................................CGCGTGCTGATCAACGAGGATC............................2220.5010100000000
......................TGCCGCCAACAATGCCACATGGAAAGAT......................................................................................................................................................................2820.5010100000000
............................CAACAATGCCACATGGAAAGATC.....................................................................................................................................................................2320.5010100000000
...........................................................................................................................................................................GCTGATCAACGAGGATCACTTTACGG...................2620.5010100000000
.......GCTGGATAACTTCAATGCCGCCAACA.......................................................................................................................................................................................2620.5010100000000
.........................................................................................................................................................................GTGCTGATCAACGAGGATCACTTTACGG...................2820.5010100000000
................................................................................................................................................................................TCAACGAGGATCACTTTACGG...................2120.5010100000000
..............................ACAATGCCACATGGAAAGATCGC...................................................................................................................................................................2320.5010100000000
....TAAGCTGGATAACTTCAATGCCGCC...........................................................................................................................................................................................2520.5010100000000
.................................................................................................................................................................................CAACGAGGATCACTTTACGGATGGATC............2720.5010100000000
...............................CAATGCCACATGGAAAGAT......................................................................................................................................................................1920.5010100000000
.......................................CATGGAAAGATGTGTGAAT..............................................................................................................................................................1920.5010100000000
......................................................................................................................................................................................AGGATCACTTTACGGATGGATCCCCC........2620.5010100000000
...............................................................................................................................................................................ATCAACGAGGATCACTTTACGGA..................2320.5010100000000
.........................................................................................................................................................................GTGCTGATCAACGAGGATC............................1920.5010100000000
..............................ACAATGCCACATGGAAAGAT......................................................................................................................................................................2020.5010100000000
.............................................................................................................................................................AATCTTTAGCGCGTGCTGAT.......................................2020.5010100000000
............................CAACAATGCCACATGGAAAGATCGC...................................................................................................................................................................2520.5010100000000
...........................CCAACAATGCCACATGGAAAGAT......................................................................................................................................................................2320.5010100000000
.....................ATGCCGCCAACAATGCCACATGG............................................................................................................................................................................2320.5010100000000
.................................................................................................................................................................................CAACGAGGATCACTTTACGGA..................2120.5010000001000
.........................................................................................................................................................ATGTAATCTTTAGCGCGTGCT..........................................2120.5010100000000
.........................................................................................................................................................................GTGCTGATCAACGAGGATCA...........................2020.5010100000000
........................................................................................................................................................................................GATCACTTTACGGATGGATCCCCCAT......2620.5010100000000
...........................................................................................................................................................................................CACTTTACGGATGGATCCCCCATCTTCA.2820.5010100000000
..................................................................................................................................................................................AACGAGGATCACTTTACGGATGGATCCCC.........2920.5010100000000
...........................................GAAAGATGTGTGAATCGGA..........................................................................................................................................................1920.5010100000000
....TAAGCTGGATAACTTCAATGCCGCCAAC........................................................................................................................................................................................2820.5010100000000
............................CAACAATGCCACATGGAAAGATG.....................................................................................................................................................................2320.5010100000000
.........................................................................................................................................................................................ATCACTTTACGGATGGATCCCC.........2220.5010100000000
...........................................................................................................................................................................GCTGATCAACGAGGATCACTTTACGGATG................2920.5011000000000
..................................................................................................................................................................................AACGAGGATCACTTTACG....................1820.5010100000000
.....................................................................GCA-----------------------------GTCGCCTT--TAAACCA---------AG.......................................................................................2020.5010100000000
...........................................................................................................................................................................................CACTTTACGGATGGATCCCCCA.......2220.5010100000000
...........................................................................................................................................................................GCTGATCAACGAGGATCACTTTACGGAT.................2820.5010100000000
.....................................................................................................................................................................................GAGGATCACTTTACGGATGGAT.............2220.5010100000000
.........................................................................................................................................................................................ATCACTTTACGGATGGATCCCCCAT......2520.5010100000000
...................................................................................................................................................................................ACGAGGATCACTTTACGG...................1820.5010100000000
................................................................................................................................................................................TCAACGAGGATCACTTTACGGATG................2420.5010100000000
.................................ATGCCACATGGAAAGATCGC...................................................................................................................................................................2070.4330300000000
droPer2
CACAGAAATTGGATAACTTCGATGATGACAACAAGGAGACCTACGAAATGGTATGTCCA---------------------------AG---------GA----ATCCCC------------------TTTC-ATAGTGGAACCCTTTT-CATGGTTTCGTTTTTAGCGTTATCTGGTCAACGATGAGTTCCAAGAGGAGGGTAGCCCCATCTTCATSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................................................................................................................................................................CAACGATGAGTTCCAAGAGGAGG................2315.005030002
........................ATGACAACAAGGAGACCTACGAAATG......................................................................................................................................................................2612.002200000
.............TAACTTCGATGATGACAACAAGGAG..................................................................................................................................................................................2512.002010001
..................................................................................................................................................................................AACGATGAGTTCCAAGAGGAGGGT..............2412.002000002
.....................................................................................................................................................................................GATGAGTTCCAAGAGGAGG................1912.002000002
......................................................................................................................................................................CGTTATCTGGTCAACGATGAGTTC..........................2411.001010000
............................................................................................................................................................................CTGGTCAACGATGAGTTCC.........................1911.001001000
..............AACTTCGATGATGACAACAAGG....................................................................................................................................................................................2211.001010000
...........GATAACTTCGATGATGACAAC........................................................................................................................................................................................2111.001010000
.............................................................................................................................................................................................CCAAGAGGAGGGTAGCCCCATC.....2211.001001000
........................ATGACAACAAGGAGACCTACG...........................................................................................................................................................................2111.001010000
......................TGATGACAACAAGGAGACCTACG...........................................................................................................................................................................2311.001000001
.......................................................................................................................................................................GTTATCTGGTCAACGATGAG.............................2011.001000001
..........................................................................................................................................................................................GTTCCAAGAGGAGGGTAGCCCCAT......2411.001000001
......................................................................................................................................................................................ATGAGTTCCAAGAGGAGGGTAGCCCC........2611.001000001
....................GATGATGACAACAAGGAGAC................................................................................................................................................................................2011.001000001
droWil2
CCCAGTATCTAGACAATTTTGATGCTAGTAATAATGCTACCTGGCAGAATGTAAGATCCTTGA-----TC---------------GAGAATAAGACATACA--AATAAAAGTCA----ACTAATA--------------------ATA-ATTCTCAAATCTTGCAGCGCTACATGATCAACGAAGATTACTATGTGGAGGGATCACCCATTTTTGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
No Reads
droVir3
GCCAGAAATTGGACAACTTTAACGTATCAAATGAGGAAGTGTGGGACGATGTAAGTTTTTTTT-----AACATTTT------ATGAAA---------AACAATGATCCT------------------GAAG--------------AAC-TT---ATTTGGTTTCAGCGTGTGCTGATCAACGAGGATTACTTCGTAGATGGTTCTCCAATCTTCATSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.........................ATCAAATGAGGAAGTGTGGGAC.........................................................................................................................................................................221146.0014620400000000000300520013000000000000000000000000000000000000001260
.......................GTATCAAATGAGGAAGTGTGGGAC.........................................................................................................................................................................24165.00650020000000000020104000200000000000000000000000000000000000000540
............................AAATGAGGAAGTGTGGGAC.........................................................................................................................................................................19123.00230010000000000000000000000000000000000000000000000000000000000220
...........................CAAATGAGGAAGTGTGGGAC.........................................................................................................................................................................20118.00180010000000000011010000000000000000000000000000000000000000000140
.........................ATCAAATGAGGAAGTGTGGGA..........................................................................................................................................................................21114.00140010000000000000010000000000000000000000000000000000000000000120
.........................ATCAAATGAGGAAGTGTGG............................................................................................................................................................................19112.0012003000000000000000100000000000000000000000000000000000000000080
.......................................................................................................................................................................................GGATTACTTCGTAGATGGTT.............20110.0010005000000000000001110100000001000000000000000000000000000000000
.......................GTATCAAATGAGGAAGTGTG.............................................................................................................................................................................2017.007000000000000000000000000000000000000000000000000000000000000070
..................TTAACGTATCAAATGAGGAAGTGTGGGA..........................................................................................................................................................................2817.007000000000000000000000000000000000000000000000000000000000000070
.........................ATCAAATGAGGAAGTGTGGGACGAT......................................................................................................................................................................2516.006000000000000000000100000000000000000000000000000000000000000050
..................TTAACGTATCAAATGAGGAAGTGTGGGAC.........................................................................................................................................................................2916.006000000000000000000000000000000000000000000000000000000000000060
..................TTAACGTATCAAATGAGGAAGT................................................................................................................................................................................2215.005001000000000000100100000000000000000000000000000000000000000110
.......................................................................................................................................................................................GGATTACTTCGTAGATGGT..............1915.005003000000000000000100100000000000000000000000000000000000000000
.......................GTATCAAATGAGGAAGTGTGGGA..........................................................................................................................................................................2315.005000000000000000000000000000000000000000000000000000000000000050
.........................ATCAAATGAGGAAGTGTGGGACG........................................................................................................................................................................2315.005001000000000000000000000000000000000000000000000000000000000040
.............................AATGAGGAAGTGTGGGAC.........................................................................................................................................................................1815.005000000000000000000000020000000000000000000000000000000000000030
.......................GTATCAAATGAGGAAGTGTGGGACG........................................................................................................................................................................2515.005002000000000000000100000000000000000000000000000000000000000020
...................TAACGTATCAAATGAGGAAGTGTGGGAC.........................................................................................................................................................................2814.004000000000000000000000000000000000000000000000000000000000000040
.......................GTATCAAATGAGGAAGTGTGGGACGAT......................................................................................................................................................................2714.004000000000000001100000000000000000000000000000000000000000000020
....................AACGTATCAAATGAGGAA..................................................................................................................................................................................1814.004000000000000000001010000000000000000000000000000000000000000020
....................AACGTATCAAATGAGGAAGTGTGGGAC.........................................................................................................................................................................2714.004000000000000000000000000000000000000000000000000000000000000040
...........................CAAATGAGGAAGTGTGGGA..........................................................................................................................................................................1914.004000000000000000000000000000000000000000000000000000000000000040
.......................GTATCAAATGAGGAAGTGTGGG...........................................................................................................................................................................2213.003000000000000000000000000000000000000000000000000000000000000030
.........................................................................................................................................................................GTGCTGATCAACGAGGATTACTT........................2313.003000000000000000000000000000000000000000000000000000000000000030
...................TAACGTATCAAATGAGGA...................................................................................................................................................................................1813.003002000000000000000000100000000000000000000000000000000000000000
.......................................................................................................................................................................GTGTGCTGATCAACGAGG...............................1813.003002000000000000000000000000000000000000000000000000000000000010
.......................................................................................................................................................................................GGATTACTTCGTAGATGGTTCT...........2213.003003000000000000000000000000000000000000000000000000000000000000
..................TTAACGTATCAAATGAGGAAGTGTGG............................................................................................................................................................................2613.003001000000000000000000000000000000000000000000000000000000000020
....GAAATTGGACAACTTTAACGT...............................................................................................................................................................................................2113.003001000000000000001000000000000000000000000000000000000000000010
......................CGTATCAAATGAGGAAGTGTGGGAC.........................................................................................................................................................................2513.003000000000000000000100000000000000000000000000000000000000000020
............................AAATGAGGAAGTGTGGGACGATC.....................................................................................................................................................................2313.003000000000000000010000000000000000000000000000000000000000000020
...........................CAAATGAGGAAGTGTGGGACGATCGT...................................................................................................................................................................2613.003001000000000000000000000000000000000000000000000000000000000020
..........................TCAAATGAGGAAGTGTGGGAC.........................................................................................................................................................................2113.003000000000000000000000000000000000000000000000000000000000000030
............................AAATGAGGAAGTGTGGGA..........................................................................................................................................................................1813.003000000000000000000000000000000000000000000000000000000000000030
.........................................................................................................................................................................................ATTACTTCGTAGATGGTTCTCCAAT......2513.003002000000000000001000000000000000000000000000000000000000000000
..............AACTTTAACGTATCAAATGAGGAA..................................................................................................................................................................................2413.003001000000000000000000000000000200000000000000000000000000000000
...................TAACGTATCAAATGAGGAAGTGTG.............................................................................................................................................................................2413.003001000000000000001000000000000000000000000000000000000000000010
..............................ATGAGGAAGTGTGGGACGATC.....................................................................................................................................................................2113.003000000000000000000200000000000000000000000000000000000000000010
...................TAACGTATCAAATGAGGAAGTGTGGGA..........................................................................................................................................................................2713.003000000000000000000000000000000000000000000000000000000000000030
...................TAACGTATCAAATGAGGAAGT................................................................................................................................................................................2113.003000000000000000001000000000000000000000000000000000000000000020
.....................................................................................................................................................................................GAGGATTACTTCGTAGATGGTT.............2212.002002000000000000000000000000000000000000000000000000000000000000
...................TAACGTATCAAATGAGGAAGTGTGG............................................................................................................................................................................2512.002000000000000000000000000000000000000000000000000000000000000020
..............................................................................................................................................................................GATCAACGAGGATTACTTCGTAGATG................2612.002000000000000000010000100000000000000000000000000000000000000000
...........................................................................................................................................................................................TACTTCGTAGATGGTTCTCCAAT......2312.002000000000000000001000000000000000000000000000000000000000000010
......AATTGGACAACTTTAACGT...............................................................................................................................................................................................1912.002000000000000000000000000000000000000000000000000000000000000020
....................................................................................................................................................................................CGAGGATTACTTCGTAGATGGTT.............2312.002001000000000000001000000000000000000000000000000000000000000000
................CTTTAACGTATCAAATGAGGAAGT................................................................................................................................................................................2412.002000000000000000000000010000000000000000000000000000000000000010
..................TTAACGTATCAAATGAGGAAGTGTG.............................................................................................................................................................................2512.002000000000000000000000000000000000000000000000000000000000000020
.....................ACGTATCAAATGAGGAAGTGTGGGAC.........................................................................................................................................................................2612.002000000000000000000100000000000000000000000000000000000000000010
.......ATTGGACAACTTTAACGTAT.............................................................................................................................................................................................2012.002000000000000000000000000000000000000000000000000000000000000020
.................................................................................................................................................................................CAACGAGGATTACTTCGTAGATG................2312.002000000000000000010000000000001000000000000000000000000000000000
.......................GTATCAAATGAGGAAGTGT..............................................................................................................................................................................1912.002001000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................TACTTCGTAGATGGTTCTCCAATCTT...2612.002001000000000000010000000000000000000000000000000000000000000000
.........................ATCAAATGAGGAAGTGTGGGACGATC.....................................................................................................................................................................2612.002000000000000000000000000000000000000000000000000000000000000020
.............CAACTTTAACGTATCAAATGA......................................................................................................................................................................................2112.002000000000000000001000010000000000000000000000000000000000000000
......................................................................................................................................................................CGTGTGCTGATCAACGAGG...............................1912.002000000000000000000000000000000000000000000000000000000000000020
........................TATCAAATGAGGAAGTGTGGGAC.........................................................................................................................................................................2312.002000000000000000000000000000000000000000000000000000000000000020
..CAGAAATTGGACAACTTTAACGTAT.............................................................................................................................................................................................2512.002000000000000000000000000000000000000000000000000000000000000020
......................CGTATCAAATGAGGAAGTGTGGGA..........................................................................................................................................................................2412.002000000000000000000000000000000000000000000000000000000000000020
...............................................................................................................................................................................ATCAACGAGGATTACTTCGTAGAT.................2411.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................ATTACTTCGTAGATGGTTCTCCAATCTTC..2911.001001000000000000000000000000000000000000000000000000000000000000
GCCAGAAATTGGACAACT......................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.........TGGACAACTTTAACGTATCAAATGA......................................................................................................................................................................................2511.001000000000000000000000100000000000000000000000000000000000000000
.............................AATGAGGAAGTGTGGGACGAT......................................................................................................................................................................2111.001000000000000000100000000000000000000000000000000000000000000000
...........................CAAATGAGGAAGTGTGGGACGAT......................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
...............ACTTTAACGTATCAAATGAGGAAGTGT..............................................................................................................................................................................2711.001000000000000000000000000000000000000000000000000000000000000010
................CTTTAACGTATCAAATGAGGAAG.................................................................................................................................................................................2311.001000000000000000000000000000001000000000000000000000000000000000
..CAGAAATTGGACAACTTTAACGT...............................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
.............CAACTTTAACGTATCAAATGAGGA...................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................CTTCGTAGATGGTTCTCCAA.......2011.001000000000000000000000100000000000000000000000000000000000000000
.........................ATCAAATGAGGAAGTGTG.............................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.............................AATGAGGAAGTGTGGGACGATG.....................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
.........TGGACAACTTTAACGTATCAAA.........................................................................................................................................................................................2211.001000000000000000001000000000000000000000000000000000000000000000
............................AAATGAGGAAGTGTGGGACGAT......................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
..................TTAACGTATCAAATGAGGA...................................................................................................................................................................................1911.001000000000000000000000100000000000000000000000000000000000000000
......................CGTATCAAATGAGGAAGTGTG.............................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................GCTGATCAACGAGGATTACTT........................2111.001000000000000000000000000000000000000000000000000000000000000010
...........................CAAATGAGGAAGTGTGGGACG........................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
..................TTAACGTATCAAATGAGGAA..................................................................................................................................................................................2011.001000000000000000000010000000000000000000000000000000000000000000
.............CAACTTTAACGTATCAAATGAGGAA..................................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
................CTTTAACGTATCAAATGAGG....................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................CTTCGTAGATGGTTCTCCAATCTT...2411.001000000000000000001000000000000000000000000000000000000000000000
.......................................................................................................................................................................................GGATTACTTCGTAGATGG...............1811.001001000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................CGTAGATGGTTCTCCAATCTT...2111.001000000000000001000000000000000000000000000000000000000000000000
.................................................................................................................................................................................CAACGAGGATTACTTCGTAGATGGTT.............2611.001000000000000000000000010000000000000000000000000000000000000000
..............AACTTTAACGTATCAAATGAGGAAGT................................................................................................................................................................................2611.001000000000000000010000000000000000000000000000000000000000000000
.................TTTAACGTATCAAATGAGGA...................................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
..........GGACAACTTTAACGTATCAAATGAGGA...................................................................................................................................................................................2711.001000000000000000000100000000000000000000000000000000000000000000
...............ACTTTAACGTATCAAATGAGGA...................................................................................................................................................................................2211.001000000000000000000000000000000000000000000000000000000000000010
.............................AATGAGGAAGTGTGGGACG........................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
....................AACGTATCAAATGAGGAAG.................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
...................TAACGTATCAAATGAGGAAGTGTGGGACG........................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000010
.....................ACGTATCAAATGAGGAAG.................................................................................................................................................................................1811.001000000000000000000100000000000000000000000000000000000000000000
...............................TGAGGAAGTGTGGGACGATCG....................................................................................................................................................................2111.001000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................................ATTACTTCGTAGATGGTTCTCCAATCTT...2811.001000000000000001000000000000000000000000000000000000000000000000
..............AACTTTAACGTATCAAATG.......................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
.........................ATCAAATGAGGAAGTGTGGGACGATCGT...................................................................................................................................................................2811.001000000000000000000000000000000000000000000000000000000000000010
...................TAACGTATCAAATGAGGAAGTGTGGG...........................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
.....................ACGTATCAAATGAGGAAGTGTGG............................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
.........................ATCAAATGAGGAAGTGTGGG...........................................................................................................................................................................2011.001000000000000000000000000000000000000000000000000000000000000010
GCCAGAAATTGGACAACTTTAAC.................................................................................................................................................................................................2311.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................GGATTACTTCGTAGATGGTTCTC..........2311.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................CGTGTGCTGATCAACGAG................................1811.001000000000000001000000000000000000000000000000000000000000000000
......AATTGGACAACTTTAACGTATCAAAT........................................................................................................................................................................................2611.001000000000000000000100000000000000000000000000000000000000000000
........................................................................................................................................................................................GATTACTTCGTAGATGGTTCTCCAAT......2611.001000000000000000000000010000000000000000000000000000000000000000
...................TAACGTATCAAATGAGGAA..................................................................................................................................................................................1911.001000000000000000000000000000000000000000000000000000000000000010
.................TTTAACGTATCAAATGAGGAAGTGTGGGA..........................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000010
....................AACGTATCAAATGAGGAAGTGTG.............................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................GAGGATTACTTCGTAGATGGTTC............2311.001000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................GTGCTGATCAACGAGGATTACTTCGTA....................2711.001000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................CGTGTGCTGATCAACGAGGATT............................2211.001000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................GATTACTTCGTAGATGGTTCTCCAATC.....2711.001001000000000000000000000000000000000000000000000000000000000000
....GAAATTGGACAACTTTAAC.................................................................................................................................................................................................1911.001001000000000000000000000000000000000000000000000000000000000000
..........................TCAAATGAGGAAGTGTGGGA..........................................................................................................................................................................2011.001000000000000000000100000000000000000000000000000000000000000000
.........TGGACAACTTTAACGTATCAAATGAGGAA..................................................................................................................................................................................2911.001000000000000000000000000000000000000000000000000000000000000010
.........................................................................................................................................................................GTGCTGATCAACGAGGATTACTTCGT.....................2611.001000000000000000000000000000000000000000000000000000000000000010
.......ATTGGACAACTTTAACGT...............................................................................................................................................................................................1811.001100000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................TCAACGAGGATTACTTCGTAGATGGT..............2611.001001000000000000000000000000000000000000000000000000000000000000
........................TATCAAATGAGGAAGTGTGGGACG........................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
........................................................................................................................................................................................GATTACTTCGTAGATGGTTCTCCAATCT....2811.001001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................CAACGAGGATTACTTCGTAGATGG...............2411.001000000000000001000000000000000000000000000000000000000000000000
....................AACGTATCAAATGAGGAAGTGTGGGA..........................................................................................................................................................................2611.001000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................CGTAGATGGTTCTCCAATCT....2011.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................ACTTCGTAGATGGTTCTCCAAT......2211.001000000000000000000000000000000000000000000000000000000000000010
.................TTTAACGTATCAAATGAGGAAGTGT..............................................................................................................................................................................2511.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................GCTGATCAACGAGGATTACTTCG......................2311.001000000000000000000000000000000000100000000000000000000000000000
...AGAAATTGGACAACTTTAACGT...............................................................................................................................................................................................2211.001000000000000000000000010000000000000000000000000000000000000000
................................................................................................................................................................................TCAACGAGGATTACTTCGTAGATG................2411.001000000000000000000000100000000000000000000000000000000000000000
.....AAATTGGACAACTTTAACGT...............................................................................................................................................................................................2011.001001000000000000000000000000000000000000000000000000000000000000
......................CGTATCAAATGAGGAAGTGTGGG...........................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................TACTTCGTAGATGGTTCTCCAA.......2211.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................CTTCGTAGATGGTTCTCCAAT......2111.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................TTCGTAGATGGTTCTCCAAT......2011.001000000000000000100000000000000000000000000000000000000000000000
.................TTTAACGTATCAAATGAGGAAGT................................................................................................................................................................................2311.001000000000000000000000000000000000000000000000000000000000000010
............ACAACTTTAACGTATCAAATGAGGA...................................................................................................................................................................................2511.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................CGTGTGCTGATCAACGAGGAT.............................2111.001000000000000000000000100000000000000000000000000000000000000000
................................GAGGAAGTGTGGGACGAT......................................................................................................................................................................1811.001000000000000000000000000000000000000000000000000000000000000010
.................................AGGAAGTGTGGGACGATCGT...................................................................................................................................................................2011.001000000001000000000000000000000000000000000000000000000000000000
..................TTAACGTATCAAATGAGGAAGTGT..............................................................................................................................................................................2411.001000000000000000000000000000000000000000000000000000000000000010
......................................................................................................................................................................................AGGATTACTTCGTAGATGGTTCTC..........2411.001000000000000000000100000000000000000000000000000000000000000000
.....AAATTGGACAACTTTAAC.................................................................................................................................................................................................1811.001001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................GGATTACTTCGTAGATGGTTCTCCAAT......2711.001000000000000001000000000000000000000000000000000000000000000000
......AATTGGACAACTTTAACGTATCAAATGA......................................................................................................................................................................................2811.001000000000000001000000000000000000000000000000000000000000000000
............................................................................................................................................................................................ACTTCGTAGATGGTTCTCCAATCTT...2511.001001000000000000000000000000000000000000000000000000000000000000
...AGAAATTGGACAACT......................................................................................................................................................................................................1520.501000000000000000000000000000000000000000000000000000000000100000
droMoj3
ATCAGAGCCTGGACAACTTTGACGACACTAACAAGAACGTGTGGGACCAAGTGAGTTCGGTAG-----TTCC----------TTAAAG---------GAATTCAATCTT------------------GTCT--------------AAC-----TTATCTTCTTCAGCGTGTTTTGATCAACGAAGACAACTTTGTAGATGGTTCACCCATTTTTATSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
GTCAGAAACTGGACAATTTTGACGAAGGCAATGAGGAAGTCTGGGATGATGTAAGATGTGATT-------AT----------AAGATT---------TCTGGCCACTTT------------------AACC--------------ACA-GTGATCTTTAATTTTAGCGCGTATTGATCAATGAGGACTACTTCGTAGATGGTTCCCCAATCTTCATSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 10:32 PM