ID:

der_541

Coordinate:

scaffold_4770:4759720-4759870 -

Confidence:

Candidate

Type:

Unknown

[View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-4.4 -4.2 -4.1

Flybase annnotation

CDS [Dere\GG24321-cds]; exon [dere_GLEANR_906:4]; intron [Dere\GG24321-in]

No Repeatable elements found

Sense Strand Reads

##################################################---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
GCGATACATCCGGCGATTATAAGCGTGCCCTATTGGCTATTGTTGGCTTCTAAAAAGAACCCCATCCAACAATAACTTGTTACTTTCGTCTGTTCCACGCTCTAACTATATGCAAACAAATGTACAAACGAAATTCAGTTATCGAATAGTTGACAATGTATAGTTTTTGAATTGGAACACGTTTTAACGCAGACGCCGTGCATTTAAAGTCGTATAATCAGAACCCCAGTCTCGCATCCTGTTGATTATTA
***************************************************************************........((((((.(((..............................))).))))))....******************************************************************************************************************
Read size # Mismatch Hit Count Total Norm Total M055
female body
V107
male body
M057
embryo
V108
head
GSM1528801
follicle cells
V040
embryo
.................................................................................................................................................................................CACGTTTTAACGAAGACGCAGTGCATT............................................... 27 2 1 3.00 3 0 0 0 0 3 0
.........................................................................................................................................................................................AACGCAGACGCCGTGCATTTAAAGTC........................................ 26 0 1 1.00 1 0 0 0 1 0 0
....................................................................................................................CAAATGTACAAACGAAATTCA.................................................................................................................. 21 0 1 1.00 1 0 0 1 0 0 0
....................................................................................................................................................................................................................TATAATCAGAACCCCAGTCTCGCATCC............ 27 0 1 1.00 1 1 0 0 0 0 0
...........................................................................CTTGTTACTTTCGTCTGTTCCA.......................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................................................................................................AATCAGAACCCCAGTCTCGCATCCTGTT........ 28 0 1 1.00 1 0 0 1 0 0 0
........TCCGGCGATTATAAGCG.................................................................................................................................................................................................................................. 17 0 1 1.00 1 0 0 0 0 1 0
...............................................................................................................................................GAATAGTTGACAATGTATAGT....................................................................................... 21 0 1 1.00 1 0 0 0 1 0 0
...............................................................................................................................................................................................GACGCCGTGCATTTAAAGT......................................... 19 0 1 1.00 1 1 0 0 0 0 0
................................................................................TACTTTCGTCTGATCCACACTCT.................................................................................................................................................... 23 2 1 1.00 1 0 0 0 0 0 1
............................................................................................................................................................TGTATAGTTTTTGAATTGGAACACGTT.................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
.......................................................................ATAACTTGTTACTTTCGTCTGTTCCAC......................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
.......................................................................................................................................................GACAATGTATAGTTTTTGAATTGG............................................................................ 24 0 1 1.00 1 1 0 0 0 0 0
.................................................................................................................................................ATAGTTGACAATGTATAGT....................................................................................... 19 0 1 1.00 1 0 0 0 1 0 0
.....................................................................................................................................................................TTTGAATTGGAACACGTTTTAACGC............................................................. 25 0 1 1.00 1 0 1 0 0 0 0
................................................................TCCAACAATAACTTGTTACTTTCGTC................................................................................................................................................................. 26 0 1 1.00 1 1 0 0 0 0 0
........................................................................................................................................................................................................CATTTAAAGTCGTATAATCA............................... 20 0 1 1.00 1 0 1 0 0 0 0
....................................................................................................................................................................................GTTTTAACGCAGACGCCGT.................................................... 19 0 1 1.00 1 0 0 0 1 0 0
.......................................................................................................................................................................................................................AATCAGAACCCCAGTCTCGC................ 20 0 1 1.00 1 0 0 1 0 0 0
........................................................................................................................TGTACAAACGAAATTCAGTTATCGA.......................................................................................................... 25 0 1 1.00 1 1 0 0 0 0 0
.........................................................................................................................................................................................................ATTTAAAGTCGTATAATCAGAACCCCAGT..................... 29 0 1 1.00 1 0 1 0 0 0 0
.............................................................................................................................................................................................CAGACGCCGTGCATTTAAAGTC........................................ 22 0 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................TTCAGTTATCGAATAGTT.................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0
.......................................................................ATAACTTGTTACTTTCGTCT................................................................................................................................................................ 20 0 1 1.00 1 0 0 0 0 0 1
...........................................................................................................................................................................TTGGAACACGTTTTAACGCAGACGCC...................................................... 26 0 1 1.00 1 0 1 0 0 0 0
........................................................................................................................................................................GAATTGGAACACGTTTTAACGCA............................................................ 23 0 1 1.00 1 0 1 0 0 0 0
..........................GCCCTATTGGCTATTGTTGGCT........................................................................................................................................................................................................... 22 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................................................ACCCAAGTCTCGCATCCTGTTG....... 22 1 1 1.00 1 0 0 0 1 0 0
.......ATCCGGCGATTATAAGCGTGCCCTATT......................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0
......................................................................................CGTCTGTTCCACGCTCTAACC................................................................................................................................................ 21 1 1 1.00 1 0 0 1 0 0 0
..............................................................................GTTACTTTCGTCTGTTCCACGCT...................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................................................................................AGACGCCGTGCATTTAAAGTCGTATA................................... 26 0 1 1.00 1 0 0 0 0 0 1
.......................................................................................................................................................................................................................AATCAGAACCCCAGTCTCGCATCCTGC......... 27 1 1 1.00 1 0 0 1 0 0 0
..................................................................................................................................................................GTTTTTGAATTGGAACAC....................................................................... 18 0 1 1.00 1 0 0 0 1 0 0
................................................................................................................................................................................ACACGTTTTAACGCAGACGCCGT.................................................... 23 0 1 1.00 1 0 0 1 0 0 0
................................................................................................................................................................................ACACGTTTTAACGCAGACGCCGTGC.................................................. 25 0 1 1.00 1 0 0 1 0 0 0
.................TATAAGCGTGCCCTATTGGCTATT.................................................................................................................................................................................................................. 24 0 1 1.00 1 0 1 0 0 0 0
..................ATAAGCGTGCCCTATTGGCTATTGT................................................................................................................................................................................................................ 25 0 1 1.00 1 0 1 0 0 0 0
...................................................AAAAAGAACCCCAACCCAC..................................................................................................................................................................................... 19 2 13 0.08 1 0 0 1 0 0 0

Anti-sense strand reads

CGCTATGTAGGCCGCTAATATTCGCACGGGATAACCGATAACAACCGAAGATTTTTCTTGGGGTAGGTTGTTATTGAACAATGAAAGCAGACAAGGTGCGAGATTGATATACGTTTGTTTACATGTTTGCTTTAAGTCAATAGCTTATCAACTGTTACATATCAAAAACTTAACCTTGTGCAAAATTGCGTCTGCGGCACGTAAATTTCAGCATATTAGTCTTGGGGTCAGAGCGTAGGACAACTAATAAT
******************************************************************************************************************........((((((.(((..............................))).))))))....***************************************************************************
Read size # Mismatch Hit Count Total Norm Total V107
male body
M055
female body
..................................................................................................................................................................................................................GCATATCTGTCTTGGGGT....................... 18 2 5 0.40 2 1 1
....................................................TTTTCTTGGGATAGGTCGTGA.................................................................................................................................................................................. 21 3 3 0.33 1 1 0
..............................................................................................................................................................................................................................TGGGGTCAGTGCTTGGGAC.......... 19 3 9 0.22 2 2 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4770:4759670-4759920 - der_541 GCGATACATCCGGCGATTATAAGCGTGCCCTATTGGCTATTGTTGGCTTCTAAAA----------AG--AA--------CCCC-A--------------------------------------TCCAACAAT--------------------------------AA------CTTGTTACTTTCG--TCTGTTCCACGCTCTA-ACTATATG--------CA---AACA-AATGTACAAAC-GA---AATTCA------GTTATCGAATAGTTGAC-A---ATGTATAGTTTT------T--------GA----------------------------------------------------------------------ATTGGAACACG-TTTTAACG-CAGA---------CG--CCGTGCATTTAA---AGTC-GTATAATCAGAA-CCCCAGTC----------TCGCATC--CTGTTGATTATTA
droYak3 v2_chr3R_random_513:2-123 + --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTACAAACCGA---AAATCA------TATATCGATTAGTT-----------------TTT------G--------GA----------------------------------------------------------------------ATGGGAACACG-TTTTAACG-AAGA---------CG--CAGTGCATTTAA---AGTC-GTAGAATCAGAA-CCCCAGTC----------TCGCATCC-CTGTTGATTATTA
droSec2 scaffold_38:230485-230735 - GCGATACATCCGGCGATTATAAGCGTGCCCTATTGGCTATTGTTGGCTTCTAAAA-----------G--A--T------CCCC-A--------------------------------------TCCAACAAT--------------------------------AA------TTTATCTCTTTCG--TCTGTTCCACGCTCTAAACTATATG--------CA---AACAGAATGTACAAAC-GA---AATTCC------GATATCGAATAGTTGAC-A---ATGTATAGTTTT------T--------GA----------------------------------------------------------------------ATTGGAACACG-TTTTAACG-AGGA---------CG--CAGTGCATTTAA----GTC-GTAGAATCAGAA-CCCCAGTC----------TCGCATC--CTGTTGATTTTTA
droSim2 3r:4407950-4408200 - dsi_22865 GCGATACATCCGGCGATTATAAGCGTGCCCTATTGGCTATTGTTGGCTTCTAAAA-----------G--A--T------CCCC-A--------------------------------------TCCAACAAT--------------------------------AA------TTTATCTCTTTCG--TCTGTTCCACGCTCTAAACTATATG--------CA---AACAGAATGTACAAAC-GA---AATTCC------GATATCGAATAGTTGAC-A---ATGTATAGTTTT------T--------GA----------------------------------------------------------------------ATTGGAACACG-TTTTAACG-AAGA---------CG--CAGTGCATTTAA----GTC-GTAGAATCAGAA-CCCCAGTC----------TCGCATC--CTGTTGATTATTA
dm3 chr3R:16895036-16895287 + GCGATACATCCGGCGATTATAAGCGTGCCCTATTGGCTATTGTTGGCTTCTAAAA----------AG--AA--------CCCC-A--------------------------------------TCCAACAAT--------------------------------AA------TTTATCTCTTTCG--TCTGTTCCACGCTCTAAACTATATG--------CA---AACAGAATGTACAAAC-AA---AATTCC------GATATCAAATAGTTGAC-A---ATGTATAGTTTT------T--------GA----------------------------------------------------------------------ATTGGAACACG-TTTTAACG-AAGA---------CG--CAGTGCATTTAA----GTC-GTAGAATCAGAA-CCCCAGTC----------TCGCATC--CTGTTGATTATTA
droEug1 scf7180000409542:243314-243581 - GCGATACATCCGGCGATTATAAGCGTGCCCTATTGGCTATTGTTGGCTTCTAAAAA---------AG--AACT------CCCA-A--------------------------------------TCCAACAAT--------------------------------AT------CTTGTCACTATCGTCACTGTTCCACGCCCTAAACTATATA--------AA--AAACAGAATGTACAAAC-AA---AATTCA------GTTATCGAATAGTTGAC-A---ATGTATAGTTTT------T--------AA----------------------------------------------------------------------ATTGGAACAAG-TTTTAACG-AAGACGAGGC-CGCG--CAGTGCATTTAA---AGTC-GTAGAATCAGAAACCCCAGTC----------TCGCATC--CTGTTAATTATTA
droBia1 scf7180000302155:252738-252996 + GCGACACATCCGGCGATTATAAGCGTGCCCTATTGGCCATTGTTGGCTTCTAAAAACA------AAG---ACT------CCCA-A--------------------------------------TCCAA--------------------------------------------CTTCTCACTTTCA--TCTGTTCCACGGCCCAAACTATACG--------CA---ACAAGAATGTACAAAC-GA---AATTCC------GATATCGAATACTTGAC-A---ACGTATAGTTTT------TC-------AA----------------------------------------------------------------------ACCGGAACAAG-TCTT-ACG-AACACGAGGC-CACG--CAGTGCATTTAA----GTC-GTAGAATCAGAT-CCCCAGTC----------TCGCGTC--CTGTTAATTATTA
droTak1 scf7180000415750:355652-355855 - GCGATACATCCGGCGATTATAAGCGTGCGCTATTGGCTATTGTTGGCTTCTAAAAA--------AAG--AACT------CCCA-A--------------------------------------ACCCACAAT--------------------------------AA------CTTGTCCATTTCG--ACTGTTCCAC------------------------------------GTACAAAT-GA---AATTCT------GATATCGAATAGTTGAA-------------------------------------------------------------------------------------------------------------------------------AGCGAGGC-CACG--CAGTGCATTTAA---AGCC-GTAGAATCAGAATCCCCAGTC----------TCACATC--CTGTTAATTATTA
droEle1 scf7180000491080:775907-776174 + GCGATACATCCGGCGATTATAAGCGTGCCCTATTGGCTATTGTTGGCTTCTAAAAA---------AG--TAAT------CCCA-A--------------------------------------TCCAACAAT--------------------------------AA------CTTGTCACTTTCG--TCTGTTCCACGCCCTAAACTATATATA------AA--TAACAGAATGTACAAAC-GA---AGTTCA------GATATCGAATAGTTGAC-A---ATGTACAGATTT------T--------AA----------------------------------------------------------------------ACTGGAAAAAG-TTTTAGCG-AAATCGAGAC-CACA--CAGTGCATTTAA---AGCC-TTAGCATCAGAATCCCAAGTC----------TCGCATC--CTGTTAATTATTA
droRho1 scf7180000771951:56683-56947 + GCGATACATCCGGCGATTATAAGCGTGCCCTATTGGCTATTGTTGGCTACTAAAAT---------AG--AAAT------CCCA-A--------------------------------------TCCGACATA--------------------------------AA------CTTGTCTCTTTCA--TCTGTTCCACGCCCTAAACTATATG--------CA--TAACCAAATGTACAAAC-GA---AATTCA------GATATCGAATAGTTGAC-A---ATGTATAAATTT------T--------AA----------------------------------------------------------------------ACTGGAACAAG-TTTTAGCG-AAGACGAGGC-CGCT--CAGTGCATTTAA---AGTC-GTAGAATCAGAATCCCCAGT-----------TCGCATC--CTGTTAATTATTA
droFic1 scf7180000454096:166799-167076 + GCGATACATCCGGCGATTATAAGCGTGCCCTATTGGCTATTGTTGGCTTCTAAAAAGATAAAAAAAG--AACT------CGCA-A--------------------------------------TCCAACAAT--------------------------------AA------CTTGTCACTTTCG--TCTGTTCCACGCCCAAAACTATATA--CT-ATACA---TCAAAAATGTACAAAC-GC---AATTCA------GAAATCGAATAGTTGAC-A---ATGTATAGCTTT------T--------AA----------------------------------------------------------------------ACTGGAACAAG-TTTTTACG-AAGACGAGGC-CACG--CAGAGCATTTAA---AATC-GTAGAATCAGAATCCCCAGT-----------TCGCATC--CTGTTAATTATTA
droKik1 scf7180000302809:167591-167899 + GCGATACATCCGGCGATTATAAGCGTGCCCTATTGGCTATTGTTGGATTCTAAAAGAATACATAAAGAGTA-T------CC-------AAAAAAC-AAAAAC-A----------A--A-AAGCTCCAACAAT--------------------------------AACTTTAACTTGTCAAATTCG--TCTGTTCCACGCCCTAAACTACATATTCTTAGACA---AAAAGAATGTACAAAT-GC---AATTCA------GATACCGATTAGTTGACGA---ATGTATAGATTT------T--------ATAT--------------------------------------------------------------------ACTGGAACAGT-TTTTAACGCAAGACGAGGC-CACG--CAGTGCATTTAA---AGCC-GTTGAATCAGAA-CCCCAGTC----------TCGCAAC--CTGTTGATTATGA
droAna3 scaffold_13340:15876269-15876567 - dan_3118 GCGATACATCCGGCGATTATAAGCGCGCCCTATTGGCCATTGTTGGATTCTAAAAAAA-AAAAAAAG--AACT------GCTA-AACCAAA-AAC-AAAA------AAAAAGCAAGAA-AAGCTCCAACA-----------------------------------A------TTAGTTGCTATCA--TCCGTTCCATGCCTTAAACTATATA--------TA--TACTACCATGTACCA------------TT------GAGATCGAATAGTTGAC-A---AAGTATAGGTTT------A--------AA----------------------------------------------------------------------GTTGGAGCAC--TTTTAAGG-AAGACGAGGC-CACT--CCGTGCATTTAA----GCT-AAAGAATCAGAA-TCTTAATCCGTGATGAAACTGCATC--ATGCTAATTAATA
droBip1 scf7180000396708:4162043-4162322 + GCGATACATCCGGCGATTATAAGCGCGCCCTATTGGCCATTGTTGGATTTTAAAA----------AG--AACT------GCTA-AACCAAA-AAC-AAAAACTAAAAAAAAGCAAGAA-AAGCTCCAACTAT--------------------------------TA------TTT---GCAATCA--TCCGTTCCATGTCTTAAACTATATATACT-A-------TATACCATGTACCA------------TT------GAGATCGAATAGTTGAC-A---AAGTATAGGTTT------T--------AA----------------------------------------------------------------------ATTGGAACACT-TTTTAAGG-AAGACGAGGC-CACT--CTGTGCATTTAA---ATCT-AAAGAATCAGAA-TCTTAACC-------------C-----ATGATGA----TA
dp5 2:30260500-30260795 - GCGACACATCTGGCGATTATAAGCGCGCCCTATTGGCCATTGTTGGATTCTAGAAA---------AG--AAAC------CCCC-AACCAAA-AAT-----------------CAAGAATCAGCTCCAACAAT--------------------------------AC------CTTTTCACTGTCT--TCTGTTCCAAGCCTTAAGCTATCTATCAC-ATACACTTAATAGAATGTACAAAAAGAGAGAGTTCA------GATATCGAATAGTTAAACACTTTCGTGTAGATTT------T--------AT----------------------------------------------------------------------ACTGGAACAAGATTTTCAAG-AAGACGAG-C-AATGTACAGTGCATTTAA---GGCCCACAGAATTAGATT---CAGTT-------------------CTACAAATCAGTT
droPer2 scaffold_6:5651094-5651389 - GCGACACATCTGGCGATTATAAGCGCGCCCTATTGGCCATTGTTGGATTCTAGAAA---------AG--AAAC------CCCC-AACCAAA-AAT-----------------CAAGAATCAGCTCCAACAAT--------------------------------AC------CTTTTCACTGTCG--TCTGTTCCAAGCCTTAAGCTATCTATCAC-ATACACTTAATAGAATGTACAAAAAGAGAGAGTTCA------GATATCGAATAGTTAAACACTTTCGTGTAGATTT------T--------AT----------------------------------------------------------------------ACTGGAACAAGATTTTCAAG-AAGACGAG-C-AATGTACAGTGCATTTAA---GGCCCACAGAATTAGATT---CAGTT-------------------CTACAAATCAGTT
droWil2 scf2_1100000004943:10869978-10870201 + GCGATACATCTGGCGATTATAAGCGTGCCCTATTGGCTATTGTTGGATTCTAAAAA-----------------------CCAA-AACCAAA-AAT-ATAA--------------A--C-AATCTCCAACAA-----------------------------------------TCTGTCACTCTCG--TCTGTTCCATGCCTTATA-----------------------AATTTGTACAA---------------------AAATCGAATAGTTATATATAAATGAAAAGTTTT------A--------AT----------------------------------------------------------------------TCTGGAACCA--TATA-----------A-GCCACGG--CTATGCATTTAA---GGCC-CT-----------------CC----------TCAGATC--ATGTTAAAT----
droVir3 scaffold_12855:7681645-7681963 + GCGATACATCTGGCGATTATAAGCGTGCCCTATTGGCTATTGTTGGATTCTAAAAA---------AG--AAATCACATGCCCCAA--------------------------------------ACCAACAATACAA----------------------------AA------ATTGTCACTGTCGTGTCTGTTCCAAGCCTTAAGC-----A--------CA---CACATATTGTACAA--------AATTTG------ACTATCGAATAGTTAGA---------CCACATATACATATATAAATCTTATATGTACCTATATATACATATATATATA------TATATATATACTATA---TGATCTACGAATGCAAA--TGTGGAACACA-GACTTACG-------A-GC-AACG--CAGTGCATTTAATGAGGC---------------CTACAGT------------CGCATCACATGTTAATTAGTA
droMoj3 scaffold_6540:24984382-24984691 - GCGATACATCTGGCGATTATAAGCGTGCCCTGTTGGCTATTGTTGGATTCTAAAAAAT-AAA-ACAG--AAATCACATGCCCC-A--------------------------------------ACCAACAATACAAAGCAAACACAAAATTAATAAGAAATAAAAT------ATTGTCACTGTCGTGTCTGTTCCATGCCTTAAGC-----A--------CA---AACATATTGTACAA--------AATTTG------ACTATATAATAGTCGAA---------ACGCATATACAT--T--------AT------------------------------------------ATTATAGAATAATCGACTAATGCAAA--ATTGGAACAAA-TTTTTACA-------A-GC-AACG--CAGTGCATTTATTGAGGC---------------CTACAGT------------CGCATCACATGTTAATTATTA
droGri2 scaffold_15074:5206386-5206739 - GCGATACATCTGGCGATTATAAGCGTGCCCTATTGGCTATTGTTGGATTGTAAAAA---------AG--AACTCAC---CCTC-A--CAAA-AAGAAAAGAA-A----------AG---AAAAACCAACAAA---A----------------------------AA------CTTGTCACTGTCGTGTCTGTTCCATGCCCTAAGCCTTATC--TT-ATA-----CACAAATTGTACAAA-------AATTCGACTATCG-AATCGAATAGTTAA-------TGCGCAGATATACATATATATAT-----------ATATATATACTTA-ATATATACAAACTTTTATACACACTATA--AGGATGTACGAATGCAAAAATGTGGAACCT--TTTTGA-------TAAGAA-AACG--CAGTGCATTTAATTAGGCC-G-----TCAGAA-CTACAGT------------CGCATCACATGTTAAATATTA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
GCGATACATCCGGCGATTATAAGCGTGCCCTATTGGCTATTGTTGGCTTCTAAAA----------AG--AA--------CCCC-A--------------------------------------TCCAACAAT--------------------------------AA------CTTGTTACTTTCG--TCTGTTCCACGCTCTA-ACTATATG--------CA---AACA-AATGTACAAAC-GA---AATTCA------GTTATCGAATAGTTGAC-A---ATGTATAGTTTT------T--------GA----------------------------------------------------------------------ATTGGAACACG-TTTTAACG-CAGA---------CG--CCGTGCATTTAA---AGTC-GTATAATCAGAA-CCCCAGTC----------TCGCATC--CTGTTGATTATTASizeHit CountTotal NormTotalM055
Female-body
M057
Embryo
V060
Head
V040
Embryo
V107
Male-body
V108
Head
GSM1528801
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................AACG-CAGA---------CG--CCGTGCATTTAA---AGTC-.....................................................2611.0010000010
...................................................................................................................................................................................................................................CA-AATGTACAAAC-GA---AATTCA------........................................................................................................................................................................................................................................2111.0010100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TATAATCAGAA-CCCCAGTC----------TCGCATC--C............2711.0011000000
............................................................................................................................................................................CTTGTTACTTTCG--TCTGTTCCA.......................................................................................................................................................................................................................................................................................................2211.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAGAA-CCCCAGTC----------TCGCATC--CTGTT........2811.0010100000
........TCCGGCGATTATAAGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1711.0010000001
.........................................................................................................................................................................................................................................................................GAATAGTTGAC-A---ATGTATAGT.........................................................................................................................................................................................................2111.0010000010
...................................................................................................................................................................................................................................................................................................................................................................................................................GA---------CG--CCGTGCATTTAA---AGT.......................................................1911.0011000000
..........................................................................................................................................................................................................................................................................................TGTATAGTTTT------T--------GA----------------------------------------------------------------------ATTGGAACACG-TT.................................................................................................2711.0011000000
..................................................................................................................................AT--------------------------------AA------CTTGTTACTTTCG--TCTGTTCCAC......................................................................................................................................................................................................................................................................................................2711.0011000000
.................................................................................................................................................................................................................................................................................GAC-A---ATGTATAGTTTT------T--------GA----------------------------------------------------------------------ATTGG..........................................................................................................2411.0011000000
...........................................................................................................................................................................................................................................................................ATAGTTGAC-A---ATGTATAGT.........................................................................................................................................................................................................1911.0010000010
...................................................................................................................................................................................................................................................................................................TT------T--------GA----------------------------------------------------------------------ATTGGAACACG-TTTTAACG-C.........................................................................................2511.0010000100
...........................................................................................................................TCCAACAAT--------------------------------AA------CTTGTTACTTTCG--TC..............................................................................................................................................................................................................................................................................................................2611.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTAA---AGTC-GTATAATCA............................................2011.0010000100
......................................................................................................................................................................................................................................................................................................................................................................................................G-TTTTAACG-CAGA---------CG--CCGT.....................................................................1911.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAGAA-CCCCAGTC----------TCGC..................2011.0010100000
........................................................................................................................................................................................................................................TGTACAAAC-GA---AATTCA------GTTATCGA................................................................................................................................................................................................................................2511.0011000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTAA---AGTC-GTATAATCAGAA-CCCCAGT.................................2911.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................CAGA---------CG--CCGTGCATTTAA---AGTC-.....................................................2211.0010000100
.........................................................................................................................................................................................................................................................TTCA------GTTATCGAATAGTT..........................................................................................................................................................................................................................1811.0010000010
..................................................................................................................................AT--------------------------------AA------CTTGTTACTTTCG--TCT.............................................................................................................................................................................................................................................................................................................2011.0010001000
.............................................................................................................................................................................................................................................................................................................................................................................................TTGGAACACG-TTTTAACG-CAGA---------CG--CC.......................................................................2611.0010000100
....................................................................................................................................................................................................................................................................................................................GA----------------------------------------------------------------------ATTGGAACACG-TTTTAACG-CA........................................................................................2311.0010000100
..........................GCCCTATTGGCTATTGTTGGCT...........................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0011000000
.......ATCCGGCGATTATAAGCGTGCCCTATT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
.......................................................................................................................................................................................CG--TCTGTTCCACGCTCTA-ACC............................................................................................................................................................................................................................................................................................2111.0010100000
...............................................................................................................................................................................GTTACTTTCG--TCTGTTCCACGCT...................................................................................................................................................................................................................................................................................................2311.0010000100
..................................................................................................................................................................................................................................................................................................................................................................................................................AGA---------CG--CCGTGCATTTAA---AGTC-GTATA................................................2611.0010001000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAGAA-CCCCAGTC----------TCGCATC--CTGC.........2711.0010100000
................................................................................................................................................................................................................................................................................................GTTTT------T--------GA----------------------------------------------------------------------ATTGGAACAC.....................................................................................................1811.0010000010
..................................................................................................................................................................................................................................................................................................................................................................................................ACACG-TTTTAACG-CAGA---------CG--CCGT.....................................................................2311.0010100000
..................................................................................................................................................................................................................................................................................................................................................................................................ACACG-TTTTAACG-CAGA---------CG--CCGTGC...................................................................2511.0010100000
.................TATAAGCGTGCCCTATTGGCTATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
..................ATAAGCGTGCCCTATTGGCTATTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000100
droYak3
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATGTACAAACCGA---AAATCA------TATATCGATTAGTT-----------------TTT------G--------GA----------------------------------------------------------------------ATGGGAACACG-TTTTAACG-AAGA---------CG--CAGTGCATTTAA---AGTC-GTAGAATCAGAA-CCCCAGTC----------TCGCATCC-CTGTTGATTATTASizeHit CountTotal NormTotalM026
Head
M043
Female-body
M056
Embryo
V046
Embryo
V052
Head
V058
Head
V120
Male-body
SRR1275488
Male larvae
SRR1275486
Male prepupae
SRR1275484
Male prepupae
GSM1528802
follicle cells
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-GTAGAATCAGAA-CCCCAGTC----------TC....................2411.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................GA---------CG--CAGTGCATTTAA---AGTC-.....................................................2011.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................GAACACG-TTTTAACG-AAGA---------.............................................................................1911.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAATCAGAA-CCCCAGTC----------TCGCATCC-T............2911.00100100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................TTTAACG-AAGA---------CG--CAGTGCA..................................................................2011.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAATCAGAA-CCCCAGTC----------TCG...................2311.00110000000000
............................................................................................................................................................................................................................................................................................................................................................................................................AACG-AAGA---------CG--CAGTGCATTTA..............................................................2111.00100000010000
droSec2
GCGATACATCCGGCGATTATAAGCGTGCCCTATTGGCTATTGTTGGCTTCTAAAA-----------G--A--T------CCCC-A--------------------------------------TCCAACAAT--------------------------------AA------TTTATCTCTTTCG--TCTGTTCCACGCTCTAAACTATATG--------CA---AACAGAATGTACAAAC-GA---AATTCC------GATATCGAATAGTTGAC-A---ATGTATAGTTTT------T--------GA----------------------------------------------------------------------ATTGGAACACG-TTTTAACG-AGGA---------CG--CAGTGCATTTAA----GTC-GTAGAATCAGAA-CCCCAGTC----------TCGCATC--CTGTTGATTTTTASizeHit CountTotal NormTotalM054
Female-body
V113
Male-body
V114
Embryo
V115
Head
..................................................................................................................................................................................................................................................................................................................................................................................................ACACG-TTTTAACG-AGGA---------CG--CAGTGC...................................................................2513.0031020
.........................................................................................................................................................................................................................................GTACAAAC-GA---AATTCC------GATATCGAATAGT...........................................................................................................................................................................................................................2912.0020200
........................................................................................................................................................................................................................................................ATTCC------GATATCGAATAGT...........................................................................................................................................................................................................................1812.0020020
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................GAA-CCCCAGTC----------TCGCATC--CTGTTG.......2411.0011000
......................................................................................................................................................................................................................................................................................................................................................................................................G-TTTTAACG-AGGA---------CG--CAGTGC...................................................................2111.0010010
..................................................................................................................................................................................................................................................................................................TTT------T--------GA----------------------------------------------------------------------ATTGGAACACG-TTTTAACG-A.........................................................................................2611.0010010
...ATACATCCGGCGATTATAAGCGTGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010100
..GATACATCCGGCGATTATAAGCGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010100
...................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCATTTAA----GTC-GTAGAATCA............................................2311.0010010
...................................................................................................................................................................................CTTTCG--TCTGTTCCACGC....................................................................................................................................................................................................................................................................................................1811.0011000
.................................................................................................................................................................................................................ATG--------CA---AACAGAATGTACAAAC-GA---AA..................................................................................................................................................................................................................................................2511.0010010
....................................................................................................................................................................AA------TTTATCTCTTTCG--TCTGTT..........................................................................................................................................................................................................................................................................................................2111.0011000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAATCAGAA-CCCCAGT.................................1911.0010010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................C-GTAGAATCAGAA-CCCCAGT.................................2011.0010010
...................................................................................................................................................................................................................................................................................................TT------T--------GA----------------------------------------------------------------------ATTGGAACACG-TTTTAACG-A.........................................................................................2511.0010100
..............................................................................................................................................................................................................................................................................................................................................................................................................................CG--CAGTGCATTTAA----GTC-GTA..................................................2011.0010100
...........................................................................................................................................................................................................................................................................ATAGTTGAC-A---ATGTATAGTTTT------T--------GA----------------------------------------------------------------------A..............................................................................................................2611.0010010
..................................................................................................................................................................................................................................................................................................................................................................................................ACACG-TTTTAACG-AGGA---------CG--CA.......................................................................2111.0010010
........................................................................................................................................................................................................................................................................................................................................................................................................TTTTAACG-AGGA---------CG--CAGTGCATTTAA----.........................................................2611.0010010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TAA----GTC-GTAGAATCAGAA-CCCCA...................................2311.0010100
.................................................................................................................................................................................CTCTTTCG--TCTGTTCCACGCT...................................................................................................................................................................................................................................................................................................2111.0011000
.....................................TATTGTTGGCTTCTAAAA-----------G--A--T------C...........................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010100
.................................................................................................................................................................................................................................................................................GAC-A---ATGTATAGTTTT------T--------GA----------------------------------------------------------------------ATTGG..........................................................................................................2411.0011000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTC----------TCGCATC--CTGTTGATT....2011.0010010
.................................................................................................................................................................................................................................AACAGAATGTACAAAC-GA---AATTCC------GA......................................................................................................................................................................................................................................2611.0011000
.........................................................................................................................................................................................................................................GTACAAAC-GA---AATTCC------GATATCGA................................................................................................................................................................................................................................2411.0010010
...ATACATCCGGCGATTATAAGCGTGCCC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100
.......................................................................................................................................................................................................................................................AATTCC------GATATCGAATAGT...........................................................................................................................................................................................................................1911.0010010
...........................................................................................................................................................................................................................................................................ATAGTTGAC-A---ATGTATAGT.........................................................................................................................................................................................................1911.0010010
.....................................................................................................................................................................................TTCG--TCTGTTCCACGCTCTAAACTAT..........................................................................................................................................................................................................................................................................................2611.0010100
droSim2
GCGATACATCCGGCGATTATAAGCGTGCCCTATTGGCTATTGTTGGCTTCTAAAA-----------G--A--T------CCCC-A--------------------------------------TCCAACAAT--------------------------------AA------TTTATCTCTTTCG--TCTGTTCCACGCTCTAAACTATATG--------CA---AACAGAATGTACAAAC-GA---AATTCC------GATATCGAATAGTTGAC-A---ATGTATAGTTTT------T--------GA----------------------------------------------------------------------ATTGGAACACG-TTTTAACG-AAGA---------CG--CAGTGCATTTAA----GTC-GTAGAATCAGAA-CCCCAGTC----------TCGCATC--CTGTTGATTATTASizeHit CountTotal NormTotalM023
Head
M024
Male-body
M025
Embryo
M053
Female-body
O001
Testis
O002
Head
SRR553485
Ovary
SRR553486
Ovary
SRR553487
Ovary
SRR553488
Ovary
SRR618934
Ovary
V044
Embryo
SRR902008
Ovary
SRR902009
Testis
SRR1275487
Male larvae
SRR1275485
Male prepupae
SRR1275483
Male prepupae
...........................................................................................................................................................................................................................................................................................................T--------GA----------------------------------------------------------------------ATTGGAACACG-TTTTAACG-AAGA---------.............................................................................2614.00400000030010000000
....................................................................................................................................................................AA------TTTATCTCTTTCG--TCTGTTCC........................................................................................................................................................................................................................................................................................................2314.00400400000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................C-GTAGAATCAGAA-CCCCAGTC----------......................2114.00440000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAATCAGAA-CCCCAGT.................................1913.00300300000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GTC-GTAGAATCAGAA-CCCC....................................1913.00321000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................CG--CAGTGCATTTAA----GTC-GTAGAATC.............................................2512.00200000010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAA----GTC-GTAGAATCAGAA-CCCCAGTC----------T.....................2912.00200000010100000000
..................................................................................................................................................................................................................................................................................................TTT------T--------GA----------------------------------------------------------------------ATTGGAACACG-TTTTAACG-A.........................................................................................2612.00200000001010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTAA----GTC-GTAGAATCAGAA-CCCC....................................2312.00202000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATTTAA----GTC-GTAGAATCAGAA-CCCCAGT.................................3112.00200000020000000000
...................................................................................................................................................................................................................................................................................................TT------T--------GA----------------------------------------------------------------------ATTGGAACACG-TTTTAACG-AAGA---------.............................................................................2812.00200000010010000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTAA----GTC-GTAGAATCAGAA-CCCC....................................2512.00200200000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TAA----GTC-GTAGAATCAGAA-CCCCAGTC----------......................2612.00200100001000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAA----GTC-GTAGAATCAGAA-CCCCAGTC----------......................2812.00200100001000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................AA----GTC-GTAGAATCAGAA-CCCC....................................2112.00220000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-GTAGAATCAGAA-CCCCAGT.................................2112.00200200000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................C-GTAGAATCAGAA-CCCCAGTC----------TC....................2312.00200200000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATTTAA----GTC-GTAGAATCAGAA-CCCCA...................................2911.00100000010000000000
........................................................................................................................................................................................................................................................ATTCC------GATATCGAATAGTT..........................................................................................................................................................................................................................1911.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA-CCCCAGTC----------TCGCATC--CTGTTGAT.....2511.00100000010000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TAA----GTC-GTAGAATCAGAA-CCCCAGTC----------T.....................2711.00100000001000000000
................................................................................................................................CAAT--------------------------------AA------TTTATCTCTTTCG--TC..............................................................................................................................................................................................................................................................................................................2111.00100000000000001000
.............................................................................................................................................................................................................................................................................................................................................................................................TTGGAACACG-TTTTAACG-AAGA---------CG--CAG......................................................................2711.00100000000000010000
...........................................................................................................................................................................................................................................ACAAAC-GA---AATTCC------GATATCGAATAGT...........................................................................................................................................................................................................................2711.00100000001000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTAA----GTC-GTAGAATCAGAA-CCCCAGT.................................2611.00100100000000000000
............................................................................................................................................................................................................................................................................................TATAGTTTT------T--------GA----------------------------------------------------------------------ATTGGAACACG-TT.................................................................................................2511.00100000000000010000
....................................................................................................................................................................AA------TTTATCTCTTTCG--TCT.............................................................................................................................................................................................................................................................................................................1811.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................C-GTAGAATCAGAA-CCCCAGTC----------TCGCATC--.............2811.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................C-GTAGAATCAGAA-CCCCAGG.................................2011.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................C-GTAGAATCAGAA-CCCCA...................................1811.00100100000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................A----GTC-GTAGAATCAGAA-CCCCAGTC----------T.....................2511.00100000010000000000
..............................TATTGGCTATTGTTGGCTTCTAAAA-----------G--......................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100010000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTAA----GTC-GTAGAATCAGAA-CCCCAGTC----------......................2711.00100000001000000000
....................................................................................................................................................................................................................................................................................................T------T--------GA----------------------------------------------------------------------ATTGGAACACG-TTTTAACG-AAGA---------.............................................................................2711.00100000010000000000
.....................................................................................................................................................................................................................................................................TATCGAATAGTTGAC-A---ATGTATAGTTT.......................................................................................................................................................................................................2711.00100000010000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTAA----GTC-GTAGAATCAGAA-CC......................................2111.00101000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTAA----GTC-GTAGAATCAGAA-CCCCAGT.................................2811.00100000010000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATTTAA----GTC-GTAGAATCAGA..........................................2311.00100000010000000000
.................................................................................................................................................................................................CCACGCTCTAAACTATATG--------C..............................................................................................................................................................................................................................................................................2011.00100100000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................ACG-TTTTAACG-AAGA---------C............................................................................1611.00100000010000000000
.........................TGCCCTATTGGCTATTGTTGGCTT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000000000000000
...................................................................................................................................T--------------------------------AA------TTTATCTCTTTCG--TCTG............................................................................................................................................................................................................................................................................................................2011.00100000000000001000
..................................................................................................................................................................................................................................................................................................................................................................................................ACACG-TTTTAACG-AAGA---------CG--CAGTGC...................................................................2511.00100100000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTAA----GTC-GTAGAATCAGAA-CCCCAGTC----------T.....................2811.00100000001000000000
.....................................................................................................................................................................................TTCG--TCTGTTCCACGCTCTAAACT............................................................................................................................................................................................................................................................................................2411.00110000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAA----GTC-GTAGAATCAGAA-CCCC....................................2411.00110000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................AA----GTC-GTAGAATCAGAA-CCCCAGT.................................2411.00100100000000000000
.................................................................................................................................................................................................................................................................................................TTTT------T--------GA----------------------------------------------------------------------ATTGGAACACG-TTTTAACG-A.........................................................................................2711.00100000010000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................C-GTAGAATCAGAA-CCCCAGT.................................2011.00100100000000000000
...........................................................................................................................................................................................................................................................................ATAGTTGAC-A---ATGTATAGT.........................................................................................................................................................................................................1911.00100000000000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAATCAGAA-CCCCAGTC----------TC....................2211.00100100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TAA----GTC-GTAGAATCAGAA-CCCC....................................2211.00100100000000000000
.........................................................................................................................................................................................................................................................TTCC------GATATCGAATAGTTGAC-A---ATG...............................................................................................................................................................................................................2511.00100000000100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GTC-GTAGAATCAGAA-CCC.....................................1811.00110000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................TGGAACACG-TTTTAACG-AAGA---------CG--CAG......................................................................2611.00100000000000001000
...............................................................................................................................................................................................................ATATG--------CA---AACAGAATGTAC..............................................................................................................................................................................................................................................................1911.00100001000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................C-GTAGAATCAGAA-CCCCAGTC----------TCGC..................2511.00101000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAGAATCAGAA-CCCCAGTC----------T.....................2111.00101000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................TC-GTAGAATCAGAA-CCCCAGTC----------TCGC..................2611.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTAA----GTC-GTAGAATCAGAA-CCC.....................................2511.00100100000000000000
................................................................................................................................................................................................................................................................................TGAC-A---ATGTATAGTTTT------T--------GA----------------------------------------------------------------------ATTGGAA........................................................................................................2711.00100000000010000000
..GATACATCCGGCGATTATAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00100000000000001000
...................................................................................................................................................................................................................................................................................................TT------T--------GA----------------------------------------------------------------------ATTGGAACACG-TT.................................................................................................1811.00100000000001000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTTAA----GTC-GTAGAATCAGAA-CCCC....................................2711.00110000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................C-GTAGAATCAGAA-CCCC....................................1711.00100000001000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TAACG-AAGA---------CG--CAGTGCATTTAA----GTC-.....................................................2611.00100000000001000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TAA----GTC-GTAGAATCAGAA-CCCCAGTC----------TC....................2811.00100100000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTAA----GTC-GTAGAATCAGAA-CCC.....................................2411.00101000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................C-GTAGAATCAGAA-CCCCAGTC----------T.....................2211.00100100000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................AA----GTC-GTAGAATCAGAA-CCCCAGTC----------......................2511.00100000000010000000
dm3
GCGATACATCCGGCGATTATAAGCGTGCCCTATTGGCTATTGTTGGCTTCTAAAA----------AG--AA--------CCCC-A--------------------------------------TCCAACAAT--------------------------------AA------TTTATCTCTTTCG--TCTGTTCCACGCTCTAAACTATATG--------CA---AACAGAATGTACAAAC-AA---AATTCC------GATATCAAATAGTTGAC-A---ATGTATAGTTTT------T--------GA----------------------------------------------------------------------ATTGGAACACG-TTTTAACG-AAGA---------CG--CAGTGCATTTAA----GTC-GTAGAATCAGAA-CCCCAGTC----------TCGCATC--CTGTTGATTATTASizeHit CountTotal NormTotalGSM154618
Ovary
GSM154620
Ovary
GSM154621
Ovary
GSM154622
Ovary
GSM180328
Head
GSM180329
Mixed-body
GSM180330
Embryo
GSM180331
Embryo
GSM180332
Embryo
GSM180333
Embryo
GSM180334
Larvae
GSM180335
Disc
GSM180336
Pupae
GSM180337
S2
GSM231091
Ovary
GSM239041
Head
GSM239050
Head
GSM239051
S2
GSM239052
S2
GSM246084
Head
GSM266765
S2
GSM280082
Ovary
GSM280083
Ovary
GSM280084
Ovary
GSM280085
Testis
GSM280086
Ovary
GSM280087
S2-NP
GSM280088
S2-NP
GSM312995
Head
GSM313160
Head
GSM313161
Head
GSM313162
Head
GSM313163
Head
GSM313164
Head
GSM313165
Head
GSM343287
Embryo
GSM379050
Ovary
GSM379051
Ovary
GSM379052
Ovary
GSM379053
Ovary
GSM379054
Ovary
GSM379055
Ovary
GSM379056
Ovary
GSM379057
Ovary
GSM379058
Ovary
GSM379059
Ovary
GSM379060
Ovary
GSM379061
Ovary
GSM379062
Ovary
GSM379063
Ovary
GSM379064
Ovary
GSM379065
Ovary
GSM379066
Ovary
GSM379067
Ovary
GSM424739
S2
GSM424740
S2
GSM424741
S2
GSM467729
Female-body
GSM467730
Female-body
GSM467731
Female-body
M002
CS
M003
Male-body
M004
Male-body
M005
ML-DmD32
M006
ML-DmD32
M029
OSC
M030
OSC
M031
OSC
M032
S2-R+
M033
S2-R+
M034
S2-R+
M035
S2-R+
M036
S2-R+
M037
S2-R+
M038
S2-R+
M039
S2-R+
M048
S2-R+
OSS2
OSS
OSS6
OSS
OSS7
OSS
OSS8
OSS
S1
Head
S10
Embryo
S11
Embryo
S12
Embryo
S13
Embryo
S14
Embryo
S15
S2-GMR
S16
Kc
S17
Larvae
S18
Larvae
S19
Pupae
S2
Head
S20
Pupae
S21
Disc
S22
Head
S23
Female-body
S24
Male-body
S25
Larvae
S26
Larvae
S27
Pupae
S28
Pupae
S29
Head
S3
Male-body
S30
S2-GMR
S31
S2
S32
S2
S33
Kc
S34
Kc
S35
Kc
S4
Female-body
S5
Disc
S6
Embryo
S7
Embryo
S8
S2
S9
Embryo
SRR001337
Head
SRR001338
Head
SRR001339
Head
SRR001340
Head
SRR001341
Head
SRR001342
Head
SRR001343
Head
SRR001344
Head
SRR001345
Head
SRR001346
Head
SRR001347
Head
SRR001348
Head
SRR001349
Head
SRR001664
Head
SRR010951
Ovary
SRR010952
Ovary
SRR010953
Ovary
SRR010954
Ovary
SRR010955
Ovary
SRR010956
Ovary
SRR010957
Ovary
SRR010958
Ovary
SRR010959
Ovary
SRR010960
Ovary
SRR014268
Embryo
SRR014269
Embryo
SRR014270
Embryo
SRR014271
Embryo
SRR014272
Embryo
SRR014273
Ovary
SRR014274
Ovary
SRR014275
Ovary
SRR014276
Ovary
SRR014277
Ovary
SRR014278
Ovary
SRR014279
Ovary
SRR014280
Ovary
SRR014281
Ovary
SRR014282
Ovary
SRR023197
S2
SRR023399
S2
SRR023400
S2
SRR023402
S2
SRR023407
S2
SRR029028
S2
SRR029029
S2
SRR029030
S2
SRR029031
S2
SRR029032
S2
SRR029033
S2
SRR029608
Head
SRR029633
Head
SRR030145
gb3
SRR031692
Head
SRR031693
Head
SRR031694
Head
SRR031696
Head
SRR031697
Head
SRR031698
Head
SRR031699
Head
SRR031700
Head
SRR031701
Head
SRR031702
Head
SRR031703
Head
SRR031704
Head
SRR032092
S2
SRR032093
S2
SRR032094
S2
SRR032095
S2-NP
SRR032096
S2-NP
SRR032152
Head
SRR060643
Testis
SRR060644
Ovary
SRR060645
Testis
SRR060646
Ovary
SRR060647
Ovary
SRR060648
Ovary
SRR060649
Ovary
SRR060650
Testis
SRR060651
Ovary
SRR060652
Testis
SRR060653
Ovary
SRR065151
Ovary
SRR065152
Ovary
SRR065153
Ovary
SRR065154
Ovary
SRR065155
Ovary
SRR065800
Ovary
SRR065801
Ovary
SRR065802
Ovary
SRR065803
Ovary
SRR065804
Ovary
SRR065805
Ovary
SRR065806
Ovary
SRR065807
Ovary
SRR097865
S2-NP
SRR097866
S2-NP
SRR097867
S2-NP
SRR298536
Ovary
SRR298537
Ovary
SRR298711
Ovary
SRR298712
Ovary
SRR317110
Ovary
SRR317111
Ovary
SRR317112
Ovary
SRR317113
Ovary
SRR317114
Ovary
SRR317115
Ovary
SRR317116
Ovary
SRR317117
Ovary
SRR341115
S2
SRR341116
S2
SRR341117
S2
SRR341118
S2
SRR351332
Mixed-body
SRR351333
Mixed-body
T004
OSC
T005
CME-L1
V001
Embryo
V002
Embryo
V003
S2
V006
Female-body
V007
Head
V008
S2
V009
CME-L1
V010
ML-DmD20-C5
V011
Sg4
V012
Male-body
V013
Head
V014
DTT
V015
DreRFHV
V018
Kc167
V019
GM2
V020
S2-R+
V021
ML-DmD21
V022
ML-DmD32
V023
Head
V024
Kc167
V025
S2-R+
V026
1182-2H
V027
ML-DmD21
V028
CME-W1-Cl.8+
V029
ML-DmD9
V030
ML-DmD8
V031
GM2
V032
S1
V033
CME-W1-Cl.8+
V034
ML-DmD16-C3
V035
ML-DmD32
V036
ML-DmD20-C5
V037
S2
V038
S2
V063
Ovary
V0632
Ovary
V064
Ovary
V0642
Ovary
V065
Ovary
V0652
Ovary
V066
Ovary
V0662
Ovary
V067
S2-NP
V073
mbn2
V074
S3
V075
ML-DmBG1-C1
V076
ML-DmBG3-C2
V077
Head
V078
Head
V079
Head
V080
Head
V081
Embryo
V082
Embryo
V083
Male-body
V084
Female-body
V085
CME-W2
V086
Female-body
V088
Ovary
V0882
Ovary
V089
Ovary
V0892
Ovary
V090
Male-body
V091
fGS/OSS
V092
Male-body
V093
Male-body
V094
S2-R+
V095
S2-R+
V096
Ovary
V097
Ovary
V098
Ovary
V125
ML-DmD9
V126
CME-L1
V127
G2
V128
S3
V129
ML-DmBG1-C1
V130
ML-DmBG3-C2
V131
ML-DmD16-C3
V132
ML-DmD32
V133
Sg4
V134
ML-DmD8
V135
CME-W2
V136
Male-body
V137
Head
V138
Male-body
V139
Female-body
V140
Female-body
V141
Female-body
V142
Female-body
V144
OSC
V145
S2
V146
S1
V147
1182-2H
V148
mbn2
GSM1528798
follicle cells
...................................................................................................................................................................................................................................................................................................TT------T--------GA----------------------------------------------------------------------ATTGGAACACG-TTTTAACG-AA........................................................................................261100.0010000000000000000000000000000000000000001000000000000001000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000100062000000000000000000000000000000000000001000000000000010001000000001000000000000000000000000000000000000000000000000000000000000000000000010000000300000100010001000010000227001100
..................................................................................................................................................................................................................................................................................................TTT------T--------GA----------------------------------------------------------------------ATTGGAACACG-TTTTAACG-AA........................................................................................27187.008700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000001000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000100000000000000200000001120012100000000306521000
....................................................................................................................................................................................................................................................................................................T------T--------GA----------------------------------------------------------------------ATTGGAACACG-TTTTAACG-AA........................................................................................25136.003600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000002000200000000000000000000001202701000
.................................................................................................................................................................................................................................................................................................TTTT------T--------GA----------------------------------------------------------------------ATTGGAACACG-TTTTAACG-AA........................................................................................28117.001700000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001010000000000000001200000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................TAGAATCAGAA-CCCCAGTC----------TCGCATC--C............27111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000110101100000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000300000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................A----GTC-GTAGAATCAGAA-CC......................................18111.001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATTTAA----GTC-GTAGAATC.............................................20111.001100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................ACG-AAGA---------CG--CAGTGCATTTAA----GTC-GTA..................................................27110.00100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000100000040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000001000000000000000000200000
..........................................................................................................................................................................................................................................................................................................................................................................................................TTAACG-AAGA---------CG--CAGTGCATTTAA----GTC-.....................................................2718.0080000000000000000000000010000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000100000
...........................................................................................................................................................................................................................................................................................................T--------GA----------------------------------------------------------------------ATTGGAACACG-TTTTAACG-AA........................................................................................2418.0080000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000001000300000
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............................................................................................................................................................................................................................................................................................................................................................................................................AACG-AAGA---------CG--CAGTGCATTT...............................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................TGCCCTATTGGCTATTGTTGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................AACG-AAGA---------CG--CAGTGCATTTAA----GTC-GT...................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................G-AAGA---------CG--CAGTGCATTTAA----GTC-G....................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTTAA----GTC-GTAGAAT..............................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................CG--CAGTGCATTTAA----GTC-GTAG.................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
......CATCCGGCGATTATAAGCGTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCAGTC----------TCGCATC--CTGTTGATTAT..2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTAA----GTC-GTAGAATCAGAA-CCCCAGTC----------......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GTC-GTAGAATCAGAA-CCCCAGT.................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................T------T--------GA----------------------------------------------------------------------ATTGGAACACG-TTTTAACG-AAGA---------.............................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAGTC----------TCGCATC--CTGTTGATT....2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................GAC-A---ATGTATAGTTTT------T--------GA----------------------------------------------------------------------ATTGGA.........................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................AGA---------CG--CAGTGCATTTAA----GTC-G....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGTC----------TCGCATC--CTGTTGATTATT.2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................TTAA----GTC-GTAGAATCAGAA-........................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................A---ATGTATAGTTTT------T--------GA----------------------------------------------------------------------ATTGGAACA......................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................G--CAGTGCATTTAA----GTC-GTAGAA...............................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
...................................................................................................................................................................................................................................................A---AATTCC------GATATCAAATAGTTGA........................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCAGTC----------TCGCATC--CTGTTGAT.....2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TGCATTTAA----GTC-GTAGAATCAGAA-CCCC....................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000
.....................AGCGTGCCCTATTGGCTATTGTTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TAA----GTC-GTAGAATCAGAA-CCCCAG..................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................GAACACG-TTTTAACG-AAGA---------CG--.........................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................ATTGGAACACG-TTTTAACG-AAGA---------CG--C........................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................ATAGTTGAC-A---ATGTATAGTTTT------T--------GA----------------------------------------------------------------------AT.............................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................TTAACG-AAGA---------CG--CAGTGC...................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...............................................................................................................................................................................................................ATATG--------CA---AACAGAATGTA...............................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................ATTCC------GATATCAAATAGTTGAC-A---A.................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
..............................................................................................................................................................................................................................................................................................TAGTTTT------T--------GA----------------------------------------------------------------------ATTGGAACACG-TTTT...............................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................GTC-GTAGAATCAGAA-CCCCA...................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................TATTGGCTATTGTTGGCTTCT........................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................TCC------GATATCAAATAGTTGAC-A---ATG...............................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................AAGCGTGCCCTATTGGCTATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TAA----GTC-GTAGAATCAGAA-CC......................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000
..................................................................................................................................AT--------------------------------AA------TTTATCTCTTTCG--T...............................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
droEug1
GCGATACATCCGGCGATTATAAGCGTGCCCTATTGGCTATTGTTGGCTTCTAAAAA---------AG--AACT------CCCA-A--------------------------------------TCCAACAAT--------------------------------AT------CTTGTCACTATCGTCACTGTTCCACGCCCTAAACTATATA--------AA--AAACAGAATGTACAAAC-AA---AATTCA------GTTATCGAATAGTTGAC-A---ATGTATAGTTTT------T--------AA----------------------------------------------------------------------ATTGGAACAAG-TTTTAACG-AAGACGAGGC-CGCG--CAGTGCATTTAA---AGTC-GTAGAATCAGAAACCCCAGTC----------TCGCATC--CTGTTAATTATTASizeHit CountTotal NormTotal
No Reads
droBia1
GCGACACATCCGGCGATTATAAGCGTGCCCTATTGGCCATTGTTGGCTTCTAAAAACA------AAG---ACT------CCCA-A--------------------------------------TCCAA--------------------------------------------CTTCTCACTTTCA--TCTGTTCCACGGCCCAAACTATACG--------CA---ACAAGAATGTACAAAC-GA---AATTCC------GATATCGAATACTTGAC-A---ACGTATAGTTTT------TC-------AA----------------------------------------------------------------------ACCGGAACAAG-TCTT-ACG-AACACGAGGC-CACG--CAGTGCATTTAA----GTC-GTAGAATCAGAT-CCCCAGTC----------TCGCGTC--CTGTTAATTATTASizeHit CountTotal NormTotal
No Reads
droTak1
GCGATACATCCGGCGATTATAAGCGTGCGCTATTGGCTATTGTTGGCTTCTAAAAA--------AAG--AACT------CCCA-A--------------------------------------ACCCACAAT--------------------------------AA------CTTGTCCATTTCG--ACTGTTCCAC------------------------------------GTACAAAT-GA---AATTCT------GATATCGAATAGTTGAA-------------------------------------------------------------------------------------------------------------------------------AGCGAGGC-CACG--CAGTGCATTTAA---AGCC-GTAGAATCAGAATCCCCAGTC----------TCACATC--CTGTTAATTATTASizeHit CountTotal NormTotal
No Reads
droEle1
GCGATACATCCGGCGATTATAAGCGTGCCCTATTGGCTATTGTTGGCTTCTAAAAA---------AG--TAAT------CCCA-A--------------------------------------TCCAACAAT--------------------------------AA------CTTGTCACTTTCG--TCTGTTCCACGCCCTAAACTATATATA------AA--TAACAGAATGTACAAAC-GA---AGTTCA------GATATCGAATAGTTGAC-A---ATGTACAGATTT------T--------AA----------------------------------------------------------------------ACTGGAAAAAG-TTTTAGCG-AAATCGAGAC-CACA--CAGTGCATTTAA---AGCC-TTAGCATCAGAATCCCAAGTC----------TCGCATC--CTGTTAATTATTASizeHit CountTotal NormTotal
No Reads
droRho1
GCGATACATCCGGCGATTATAAGCGTGCCCTATTGGCTATTGTTGGCTACTAAAAT---------AG--AAAT------CCCA-A--------------------------------------TCCGACATA--------------------------------AA------CTTGTCTCTTTCA--TCTGTTCCACGCCCTAAACTATATG--------CA--TAACCAAATGTACAAAC-GA---AATTCA------GATATCGAATAGTTGAC-A---ATGTATAAATTT------T--------AA----------------------------------------------------------------------ACTGGAACAAG-TTTTAGCG-AAGACGAGGC-CGCT--CAGTGCATTTAA---AGTC-GTAGAATCAGAATCCCCAGT-----------TCGCATC--CTGTTAATTATTASizeHit CountTotal NormTotal
No Reads
droFic1
GCGATACATCCGGCGATTATAAGCGTGCCCTATTGGCTATTGTTGGCTTCTAAAAAGATAAAAAAAG--AACT------CGCA-A--------------------------------------TCCAACAAT--------------------------------AA------CTTGTCACTTTCG--TCTGTTCCACGCCCAAAACTATATA--CT-ATACA---TCAAAAATGTACAAAC-GC---AATTCA------GAAATCGAATAGTTGAC-A---ATGTATAGCTTT------T--------AA----------------------------------------------------------------------ACTGGAACAAG-TTTTTACG-AAGACGAGGC-CACG--CAGAGCATTTAA---AATC-GTAGAATCAGAATCCCCAGT-----------TCGCATC--CTGTTAATTATTASizeHit CountTotal NormTotal
No Reads
droKik1
GCGATACATCCGGCGATTATAAGCGTGCCCTATTGGCTATTGTTGGATTCTAAAAGAATACATAAAGAGTA-T------CC-------AAAAAAC-AAAAAC-A----------A--A-AAGCTCCAACAAT--------------------------------AACTTTAACTTGTCAAATTCG--TCTGTTCCACGCCCTAAACTACATATTCTTAGACA---AAAAGAATGTACAAAT-GC---AATTCA------GATACCGATTAGTTGACGA---ATGTATAGATTT------T--------ATAT--------------------------------------------------------------------ACTGGAACAGT-TTTTAACGCAAGACGAGGC-CACG--CAGTGCATTTAA---AGCC-GTTGAATCAGAA-CCCCAGTC----------TCGCAAC--CTGTTGATTATGASizeHit CountTotal NormTotal
No Reads
droAna3
GCGATACATCCGGCGATTATAAGCGCGCCCTATTGGCCATTGTTGGATTCTAAAAAAA-AAAAAAAG--AACT------GCTA-AACCAAA-AAC-AAAA------AAAAAGCAAGAA-AAGCTCCAACA-----------------------------------A------TTAGTTGCTATCA--TCCGTTCCATGCCTTAAACTATATA--------TA--TACTACCATGTACCA------------TT------GAGATCGAATAGTTGAC-A---AAGTATAGGTTT------A--------AA----------------------------------------------------------------------GTTGGAGCAC--TTTTAAGG-AAGACGAGGC-CACT--CCGTGCATTTAA----GCT-AAAGAATCAGAA-TCTTAATCCGTGATGAAACTGCATC--ATGCTAATTAATASizeHit CountTotal NormTotalM044
Female-body
M058
Embryo
V039
Embryo
V055
Head
V105
Male-body
V106
Head
...........................................................................................................................................................................................................................................................................................GTATAGGTTT------A--------AA----------------------------------------------------------------------GTTGGA.........................................................................................................1912.002020000
......................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTTAA----GCT-AAAGAATCAGAA-TC......................................2511.001010000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCGTGATGAAACTGCAT................2011.001001000
.................................................................................................................................................................................................................................................................................GAC-A---AAGTATAGGTTT------A--------AA----------------------------------------------------------------------GTTGGA.........................................................................................................2511.001010000
.................................................................................................................................................................................................................ATA--------TA--TACTACCATGTACCA------------TT------GAGAT...................................................................................................................................................................................................................................2711.001010000
.......................................................................................................................................................................................CA--TCCGTTCCATGCCTTAA...............................................................................................................................................................................................................................................................................................1911.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................GG-AAGACGAGGC-CACT--CCGTGC...................................................................2211.001010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................A-TCTTAATCCGTGATGAAACTGCAT................2511.001010000
..................................................................................................................................................................................................................................................................................................................................................................................................GCAC--TTTTAAGG-AAGACGAGGC-...............................................................................2211.001010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCAGAA-TCTTAATCCGTG............................2011.001010000
.......................................................................................................................................................................................................................................ATGTACCA------------TT------GAGATCGAATAGTTGAC-A---..................................................................................................................................................................................................................2811.001000001
....................................................................................................................................................................................................................................................................................................T------A--------AA----------------------------------------------------------------------GTTGGAGCAC--TTTTAAGG-AAGA......................................................................................2611.001000001
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATCCGTGATGAAACTGCATC--.............2111.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAATCAGAA-TCTTAATCCGTG............................2211.001100000
................TTATAAGCGCGCCCTATTGGCCATT..................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
....................................................................................AACCAAA-AAC-AAAA------AAAAAGCC.........................................................................................................................................................................................................................................................................................................................................................................................2240.251010000
.............................................................................................AC-AAAA------AAAAAGCAAGAG-....................................................................................................................................................................................................................................................................................................................................................................................18160.061100000
droBip1
GCGATACATCCGGCGATTATAAGCGCGCCCTATTGGCCATTGTTGGATTTTAAAA----------AG--AACT------GCTA-AACCAAA-AAC-AAAAACTAAAAAAAAGCAAGAA-AAGCTCCAACTAT--------------------------------TA------TTT---GCAATCA--TCCGTTCCATGTCTTAAACTATATATACT-A-------TATACCATGTACCA------------TT------GAGATCGAATAGTTGAC-A---AAGTATAGGTTT------T--------AA----------------------------------------------------------------------ATTGGAACACT-TTTTAAGG-AAGACGAGGC-CACT--CTGTGCATTTAA---ATCT-AAAGAATCAGAA-TCTTAACC-------------C-----ATGATGA----TASizeHit CountTotal NormTotal
No Reads
dp5
GCGACACATCTGGCGATTATAAGCGCGCCCTATTGGCCATTGTTGGATTCTAGAAA---------AG--AAAC------CCCC-AACCAAA-AAT-----------------CAAGAATCAGCTCCAACAAT--------------------------------AC------CTTTTCACTGTCT--TCTGTTCCAAGCCTTAAGCTATCTATCAC-ATACACTTAATAGAATGTACAAAAAGAGAGAGTTCA------GATATCGAATAGTTAAACACTTTCGTGTAGATTT------T--------AT----------------------------------------------------------------------ACTGGAACAAGATTTTCAAG-AAGACGAG-C-AATGTACAGTGCATTTAA---GGCCCACAGAATTAGATT---CAGTT-------------------CTACAAATCAGTTSizeHit CountTotal NormTotalM022
Male-body
M040
Female-body
M059
Embryo
M062
Head
V043
Embryo
V051
Head
V112
Male-body
SRR902010
Ovary
SRR902011
Testis
SRR902012
CNS imaginal disc
..................................................................................................................................AT--------------------------------AC------CTTTTCACTGTCT--TCT.............................................................................................................................................................................................................................................................................................................2012.0020200000000
.....................................................................................................................................................................................................................................................................TATCGAATAGTTAAACACTTT.................................................................................................................................................................................................................2112.0020000200000
.....................................................................................................................................................................................................................................................................................................................T----------------------------------------------------------------------ACTGGAACAAGATTTTCAAG-AAGACG....................................................................................2712.0020000000200
.........................................................................................................................................................................................................................................GTACAAAAAGAGAGAGTTCA------GATATCGA................................................................................................................................................................................................................................2811.0010000001000
.....................................................................................................................................................................................................................................................................................................................T----------------------------------------------------------------------ACTGGAACAAGATTTTCAAG-AAGA......................................................................................2511.0010000000100
......................................................................................CCAAA-AAT-----------------CAAGAATCAGC................................................................................................................................................................................................................................................................................................................................................................................1911.0010100000000
...........................................................................................................................................................................................................................................................................................................T--------AT----------------------------------------------------------------------ACTGGAACAAGATTTG...............................................................................................1911.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGATT---CAGTT-------------------CTACAAATCA...2311.0010100000000
....................................................................................................................AATCAGCTCCAACAAT--------------------------------AC------CTTTTCACT......................................................................................................................................................................................................................................................................................................................2711.0010100000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................ATGTACAGTGCATTTAA---GT........................................................1911.0010100000000
..............................................................................................................................................................................................................TATCTATCAC-ATACACTTAATAGAATGC................................................................................................................................................................................................................................................................2811.0010010000000
.................................................................................................................................................................................................................................................................................................ATTT------T--------AT----------------------------------------------------------------------ACTGGAACAAGATT.................................................................................................2111.0010000001000
..............................................................................................................................................................................TTTCACTGTCT--TCTGTTCCAAGCC...................................................................................................................................................................................................................................................................................................2411.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................TCAAG-AAGACGAG-C-AATGTA.........................................................................2011.0010000001000
..............................................................................................................................................................................................GTTCCAAGCCTTAAGCTATC.........................................................................................................................................................................................................................................................................................2011.0010100000000
......................................................AA---------AG--AAAC------CCCC-AACCAAA-A..............................................................................................................................................................................................................................................................................................................................................................................................................2011.0010100000000
....................................................................................................................................................................................................................................................................................................T------T--------AT----------------------------------------------------------------------ACTGGAACAAGATTTT...............................................................................................2011.0010100000000
....................................................................................................................................................................................................................................................................ATATCGAATAGTTAAACACTTT.................................................................................................................................................................................................................2211.0010100000000
..........................................................................................A-AAT-----------------CAAGAATCAGCTCCAACAAT--------------------------------AC------C..............................................................................................................................................................................................................................................................................................................................2711.0010001000000
............................................................................................................................................................................................................................................................................................TGTAGATTT------T--------AT----------------------------------------------------------------------ACTGGAACA......................................................................................................2111.0010000000001
...........................................................................................................................................................................................................................................................................................GTGTAGATTT------T--------AT----------------------------------------------------------------------ACTGGAA........................................................................................................2011.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................GTACAGTGCATTTAA---GGCCCA....................................................2111.0010100000000
..........................................................................................................................................................................................................................................TACAAAAAGAGAGAGTTCA------GA......................................................................................................................................................................................................................................2120.5010100000000
droPer2
GCGACACATCTGGCGATTATAAGCGCGCCCTATTGGCCATTGTTGGATTCTAGAAA---------AG--AAAC------CCCC-AACCAAA-AAT-----------------CAAGAATCAGCTCCAACAAT--------------------------------AC------CTTTTCACTGTCG--TCTGTTCCAAGCCTTAAGCTATCTATCAC-ATACACTTAATAGAATGTACAAAAAGAGAGAGTTCA------GATATCGAATAGTTAAACACTTTCGTGTAGATTT------T--------AT----------------------------------------------------------------------ACTGGAACAAGATTTTCAAG-AAGACGAG-C-AATGTACAGTGCATTTAA---GGCCCACAGAATTAGATT---CAGTT-------------------CTACAAATCAGTTSizeHit CountTotal NormTotalM021
Embryo
M042
Female-body
V042
Embryo
V050
Head
V057
Head
V111
Male-body
................................................................................................................................................................................................................................................................................................................................................................................................GAACAAGATTTTCAAG-AAGAC.....................................................................................2114.004400000
......................................ATTGTTGGATTCTAGAAA---------..........................................................................................................................................................................................................................................................................................................................................................................................................................................1814.004400000
................................................................................................................................................................................TCACTGTCG--TCTGTTCCAAGCCTTAG...............................................................................................................................................................................................................................................................................................2612.002200000
......................................................................................................................................................................................................................................................................................CTTTCGTGTAGATTT------T--------AT----------------------------------------------------------------------ACTGGG.........................................................................................................2411.001100000
...............................ATTGGCCATTGTTGGATTCTAGAAA---------A.........................................................................................................................................................................................................................................................................................................................................................................................................................................2611.001100000
.........................................GTTGGATTCTAGAAA---------AG--A.....................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000001
................................................................................................................................CAAT--------------------------------AC------CTTTTCACTGTCG--TCT.............................................................................................................................................................................................................................................................................................................2211.001100000
...............................................................................................................................................................................................................ATCTATCAC-ATACACTTAATAGAAT..................................................................................................................................................................................................................................................................2511.001010000
.....................................................................................................................................................................................................................................GAATGTACAAAAAGAGAGAGTT................................................................................................................................................................................................................................................2211.001000001
droWil2
GCGATACATCTGGCGATTATAAGCGTGCCCTATTGGCTATTGTTGGATTCTAAAAA-----------------------CCAA-AACCAAA-AAT-ATAA--------------A--C-AATCTCCAACAA-----------------------------------------TCTGTCACTCTCG--TCTGTTCCATGCCTTATA-----------------------AATTTGTACAA---------------------AAATCGAATAGTTATATATAAATGAAAAGTTTT------A--------AT----------------------------------------------------------------------TCTGGAACCA--TATA-----------A-GCCACGG--CTATGCATTTAA---GGCC-CT-----------------CC----------TCAGATC--ATGTTAAAT----SizeHit CountTotal NormTotalM020
Head
M045
Female-body
V117
Male-body
V118
Embryo
V119
Head
.......................................TTGTTGGATTCTAAAAA-----------------------CCAA-AACC...................................................................................................................................................................................................................................................................................................................................................................................................................2512.00220000
...............................ATTGGCTATTGTTGGATTC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00110000
..............GATTATAAGCGTGCCCTATTGGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.00100010
...............................ATTGGCTATTGTTGGATTCTAAAAA-----------------------C...........................................................................................................................................................................................................................................................................................................................................................................................................................2611.00110000
......................................ATTGTTGGATTCTAAAAA-----------------------CCA.........................................................................................................................................................................................................................................................................................................................................................................................................................2111.00101000
...............................................................................................................................................................................GTCACTCTCG--TCTGTTCC........................................................................................................................................................................................................................................................................................................1811.00110000
..................................................................................................................................A-----------------------------------------TCTGTCACTCTCG--TCTGTTCC........................................................................................................................................................................................................................................................................................................2211.00100010
.......................................................................................................................................................................................................................................................................................AAATGAAAAGTTTT------A--------AT----------------------------------------------------------------------TCTGGAACC......................................................................................................2611.00100010
........TCTGGCGATTATAAGCGTGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110000
............................................................................................................................................................................................................................................................................................................................................................................................TCTGGAACCA--TATA-----------A-GCC...............................................................................1811.00110000
.............................CTATTGGCTATTGTTGGATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.00110000
...............................ATTGGCTATTGTTGGATTCTAAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00110000
..........TGGCGATTATAAGCGTGCCCTATTGGCTA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................2911.00100100
............................................................................................................................................................................................CTGTTCCATGCCTTATA-----------------------AATTTGTACA.............................................................................................................................................................................................................................................................2711.00100010
...................................................................................................................................................................................................................................................................................................TT------A--------AT----------------------------------------------------------------------TCTGGAACCA--TATA-----------A-AAA...............................................................................2350.20110000
droVir3
GCGATACATCTGGCGATTATAAGCGTGCCCTATTGGCTATTGTTGGATTCTAAAAA---------AG--AAATCACATGCCCCAA--------------------------------------ACCAACAATACAA----------------------------AA------ATTGTCACTGTCGTGTCTGTTCCAAGCCTTAAGC-----A--------CA---CACATATTGTACAA--------AATTTG------ACTATCGAATAGTTAGA---------CCACATATACATATATAAATCTTATATGTACCTATATATACATATATATATA------TATATATATACTATA---TGATCTACGAATGCAAA--TGTGGAACACA-GACTTACG-------A-GC-AACG--CAGTGCATTTAATGAGGC---------------CTACAGT------------CGCATCACATGTTAATTAGTASizeHit CountTotal NormTotalM027
Male-body
M028
Head
M047
Female-body
M061
Embryo
SRR060654
Ovary
SRR060655
Testis
SRR060656
Ovary
SRR060657
Testis
SRR060658
Ovary
SRR060659
Testis
SRR060660
Ovary
SRR060661
Embryo
SRR060662
Embryo
SRR060663
Embryo
SRR060664
Male-body
SRR060665
Female-body
SRR060666
Male-body
SRR060667
Female-body
SRR060668
Male-body
SRR060669
Female-body
SRR060670
Testis
SRR060671
Male-body
SRR060672
Female-body
SRR060673
Ovary
SRR060674
Ovary
SRR060675
Ovary
SRR060676
Ovary
SRR060677
Ovary
SRR060678
Testis
SRR060679
Testis
SRR060680
Testis
SRR060681
Testis
SRR060682
Embryo
SRR060683
Testis
SRR060684
Embryo
SRR060685
Embryo
SRR060686
Embryo
SRR060687
Embryo
SRR060688
Ovary
SRR060689
Testis
SRR1106712
embryo_0-2h
SRR1106713
embryo_0-2h
SRR1106714
embryo_2-4h
SRR1106715
embryo_4-6h
SRR1106716
embryo_4-6h
SRR1106717
embryo_6-8h
SRR1106718
embryo_6-8h
SRR1106719
embryo_8-10h
SRR1106720
embryo_8-10h
SRR1106721
embryo_10-12h
SRR1106722
embryo_10-12h
SRR1106723
embryo_12-14h
SRR1106724
embryo_12-14h
SRR1106725
embryo_14-16h
SRR1106726
embryo_14-16h
SRR1106727
larvae
SRR1106728
larvae
SRR1106729
mixed whole adult body
SRR1106730
embryo_16-30h
V047
Embryo
V053
Head
V116
Male-body
GSM1528803
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................ATACTATA---TGATCTACGAATGCAAA--T..............................................................................................................2613.003000000000000000000100000000000000200000000000000000000000000000
...................................................................................................................................................................................CTGTCGTGTCTGTTCCAAGCCTTAAGC-----........................................................................................................................................................................................................................................................................................2713.003030000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................CTTACG-------A-GC-AACG--CAGTGCA..................................................................2012.002000000000000000000000000000000000200000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................A-GACTTACG-------A-GC-AACG--CAGT.....................................................................2012.002000000010000000000000000000000000010000000000000000000000000000
..................................................................................................................................ATACAA----------------------------AA------ATTGTCACTGTCGT.................................................................................................................................................................................................................................................................................................................2211.001000000000000010000000000000000000000000000000000000000000000000
............................CCTATTGGCTATTGTTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000000000000000000000000000000010000000000000000000000000000
.......................................................................ATCACATGCCCCAA--------------------------------------ACCAAC..........................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000000000000000000010000000000000000000000000000
.....................................................................................................................................................................A------ATTGTCACTGTCGTGTCT.............................................................................................................................................................................................................................................................................................................1911.001000000000000000000000000000000000000100000000000000000000000000
GCGATACATCTGGCGATTATAAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001001000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................GC-AACG--CAGTGCATTTAATGAGGC---------------........................................2411.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GACTTACG-------A-GC-AACG--CAGT.....................................................................1911.001000000000000010000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................A---TGATCTACGAATGCAAA--TGT............................................................................................................2111.001000100000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................ATA---TGATCTACGAATGCAAA--TGT............................................................................................................2311.001000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................................................................................................................................................................TACG-------A-GC-AACG--CAGTGCAT.................................................................1911.001000000000000000000000000000000000010000000000000000000000000000
..........TGGCGATTATAAGCGTGCCCTATTGGCTATTGTTGGATTCTAAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................4511.001000000000000000000000000000000000000000000000000000000001000000
..........................................................................................................................................................................................................................................................................................................................................................................GATCTACGAATGCAAA--TGTG...........................................................................................................2011.001000000000000000000000000000000000010000000000000000000000000000
...........................................................................................................................................................................................TCTGTTCCAAGCCTTAAGC-----A--------CA---CAC.......................................................................................................................................................................................................................................................................2511.001100000000000000000000000000000000000000000000000000000000000000
...............ATTATAAGCGTGCCCTATTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000000000000000001000000000000000000000000000000000000000000
..........TGGCGATTATAAGCGTGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000010000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................A--TGTGGAACACA-GACTTACG-------A-GC-AAC............................................................................2611.001000000000000010000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................AAA--TGTGGAACACA-GACT...............................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
..............................TATTGGCTATTGTTGGATTCTAAAAA---------AG--AAATCACA..............................................................................................................................................................................................................................................................................................................................................................................................................................3611.001000000000000000000000000000000000000000000000001000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................AATGAGGC---------------CTACAGT------------CGCATCAC.............2311.001000100000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GACTTACG-------A-GC-AACG--CAGTGCATTTAAT............................................................2811.001000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................................TGTGGAACACA-GACTTACG-------A-G.................................................................................2111.001000000001000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................CACA-GACTTACG-------A-GC-AACG--CAGT.....................................................................2311.001000000000000010000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................CTATA---TGATCTACGAATGCAAA--T..............................................................................................................2311.001000000000000000010000000000000000000000000000000000000000000000
.......ATCTGGCGATTATAAGCG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.001000000010000000000000000000000000000000000000000000000000000000
...................................................................................................................................TACAA----------------------------AA------ATTGTCACTGTCGTGT...............................................................................................................................................................................................................................................................................................................2311.001000000000000010000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................ATATATACTATA---TGATCTACGA........................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................ACACA-GACTTACG-------A-GC-AAC............................................................................1911.001000000000000000000000000001000000000000000000000000000000000000
........................................................................................................................................................................................................................................................ATTTG------ACTATCGAATAGT...........................................................................................................................................................................................................................1811.001000000010000000000000000000000000000000000000000000000000000000
..................................................................................................................................ATACAA----------------------------AA------ATTGTCACTGTCGTGTCT.............................................................................................................................................................................................................................................................................................................2611.001000000000000000000000000000000000100000000000000000000000000000
.........................................................................................................................................................................................................................................GTACAA--------AATTTG------ACTATCGAATAGT...........................................................................................................................................................................................................................2511.001000000000000000000000000000000000010000000000000000000000000000
.......................CGTGCCCTATTGGCTATTGT................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.001000000010000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................GATCTACGAATGCAAA--TGT............................................................................................................1911.001000000000000000000000000000000000000000000000000000000000001000
...................................................................................................................................................................................................................................................................................................................................................................................................CACA-GACTTACG-------A-GC-AACG--CAGTGC...................................................................2511.001000100000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................GTGGAACACA-GACTTACG-------A-GC-AACG--C........................................................................2611.001000000000000100000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................TATCGAATAGTTAGA---------CCACATATACAT..................................................................................................................................................................................................2711.001001000000000000000000000000000000000000000000000000000000000000
......................................ATTGTTGGATTCTAAAAA---------AG--A.....................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................ATCTACGAATGCAAA--TGT............................................................................................................1811.001000000000000000000000000000001000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................AAA--TGTGGAACACA-GACTTACG-------A-GC-...............................................................................2511.001000000000000010000000000000000000000000000000000000000000000000
.................................TGGCTATTGTTGGATTCTAAAAA---------A.........................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000000000000000000000000000001000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................TACTATA---TGATCTACGAATGCAAA--TGT............................................................................................................2711.001000000100000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................AACACA-GACTTACG-------A-GC-AAC............................................................................2011.001100000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................TTCCAAGCCTTAAGC-----A--------CA---CAC.......................................................................................................................................................................................................................................................................2111.001000000000000000000000000010000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCACATGTTAATTAGT.1811.001001000000000000000000000000000000000000000000000000000000000000
....................................CTATTGTTGGATTCTAAAAA---------AG--A.....................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000010000000000000000000000000000
......................................................AA---------AG--AAATCACATGCCCCAA--------------------------------------A...............................................................................................................................................................................................................................................................................................................................................................................2111.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................GGAACACA-GACTTACG-------A-GC-AAC............................................................................2211.001000000000000000000000000000000000001000000000000000000000000000
......................................................................................................................................................................................................................................................................ATCGAATAGTTAGA---------CCACATA.......................................................................................................................................................................................................2111.001000000000000000000000000000010000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................CACATATACATATATAAATCTT.......................................................................................................................................................................................2211.001001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................GTGGAACACA-GACTTACG-------....................................................................................1811.001000000000100000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................GACTTACG-------A-GC-AACG--CAGTGCA..................................................................2211.001000000000100000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................GTACCTATATATACATATAT...............................................................................................................................................................2011.001000000000000000001000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................CACA-GACTTACG-------A-GC-AACG--CA.......................................................................2111.001000000000001000000000000000000000000000000000000000000000000000
.................................................................................................................................AATACAA----------------------------AA------ATTGTCACTGTCGT.................................................................................................................................................................................................................................................................................................................2311.001000000000000010000000000000000000000000000000000000000000000000
...................................................................................................................................TACAA----------------------------AA------ATTGTCACTGTCGT.................................................................................................................................................................................................................................................................................................................2111.001000000000000010000000000000000000000000000000000000000000000000
droMoj3
GCGATACATCTGGCGATTATAAGCGTGCCCTGTTGGCTATTGTTGGATTCTAAAAAAT-AAA-ACAG--AAATCACATGCCCC-A--------------------------------------ACCAACAATACAAAGCAAACACAAAATTAATAAGAAATAAAAT------ATTGTCACTGTCGTGTCTGTTCCATGCCTTAAGC-----A--------CA---AACATATTGTACAA--------AATTTG------ACTATATAATAGTCGAA---------ACGCATATACAT--T--------AT------------------------------------------ATTATAGAATAATCGACTAATGCAAA--ATTGGAACAAA-TTTTTACA-------A-GC-AACG--CAGTGCATTTATTGAGGC---------------CTACAGT------------CGCATCACATGTTAATTATTASizeHit CountTotal NormTotalM046
Female-body
V041
Embryo
V049
Head
V056
Head
M060
Embryo
V110
Male-body
...............................................................................................................................................................................GTCACTGTCGTGTCTGTTCCATGC....................................................................................................................................................................................................................................................................................................2412.002000002
............................................................................................................................................................................ATTGTCACTGTCGTGTCTGTTCCATGCC...................................................................................................................................................................................................................................................................................................2812.002000002
..............................................................................................................................................................................................................................................................................................................................................................................GACTAATGCAAA--ATTGGAACAAA-TT.................................................................................................2511.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................A-------A-GC-AACG--CAGTGCATTTATTGAGGC---------------C.......................................2711.001000100
.................................................................................................................................................................................CACTGTCGTGTCTGTTCCATGC....................................................................................................................................................................................................................................................................................................2211.001000001
................................................................................................................................................................................TCACTGTCGTGTCTGTTCCATGCCA..................................................................................................................................................................................................................................................................................................2511.001000001
.........................................................................................................................................................................................................................................................................................................................................................................................A--ATTGGAACAAA-TTTTTACA-------A-GC-AACG--CA.......................................................................2911.001100000
.....................................................................................................................................................................T------ATTGTCACTGTCGTGTCTGTTCC........................................................................................................................................................................................................................................................................................................2411.001100000
......................................................................................................................................................................................................................................................................ATATAATAGTCGAA---------ACGCATATACAT--T--------.......................................................................................................................................................................................2711.001100000
..GATACATCTGGCGATTATAAGCGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.001000001
........................GTGCCCTGTTGGCTATTGTTGGATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
..............GATTATAAGCGTGCCCTGTTGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.001000001
...................................................................................................................................................................................................................................................................ACTATATAATAGTCGAA---------ACGC..........................................................................................................................................................................................................2111.001000001
....................................................................................................................................................................................................................................................................................................................AT------------------------------------------ATTATAGAATAATCGACTA........................................................................................................................2111.001100000
..........................GCCCTGTTGGCTATTGTTGGATT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001100000
................................................................................................................................................................................................................................................................................................................................................................................................GAACAAA-TTTTTACA-------A-GC-AACG--CAGT.....................................................................2611.001100000
..................................................................................................................................................................................................................................................................................................................................................................TATAGAATAATCGACTAATGCA...................................................................................................................2211.001100000
....................................................................................................................................................................................................................................................................................................................AT------------------------------------------ATTATAGAATAATCGACTAATGC....................................................................................................................2511.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................A-GC-AACG--CAGTGCATTTATTGAGGC---------------CT......................................2711.001000001
....................................................................................................................................................................................................................................................................................................................................................................TAGAATAATCGACTAATGCA...................................................................................................................2011.001000001
droGri2
GCGATACATCTGGCGATTATAAGCGTGCCCTATTGGCTATTGTTGGATTGTAAAAA---------AG--AACTCAC---CCTC-A--CAAA-AAGAAAAGAA-A----------AG---AAAAACCAACAAA---A----------------------------AA------CTTGTCACTGTCGTGTCTGTTCCATGCCCTAAGCCTTATC--TT-ATA-----CACAAATTGTACAAA-------AATTCGACTATCG-AATCGAATAGTTAA-------TGCGCAGATATACATATATATAT-----------ATATATATACTTA-ATATATACAAACTTTTATACACACTATA--AGGATGTACGAATGCAAAAATGTGGAACCT--TTTTGA-------TAAGAA-AACG--CAGTGCATTTAATTAGGCC-G-----TCAGAA-CTACAGT------------CGCATCACATGTTAAATATTASizeHit CountTotal NormTotalM041
Female-body
V109
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGCATTTAATTAGGCC-G-----TCA............................................2211.00101
...................................................................................................................................................................................................................................................................................................................................................................ATA--AGGATGTACGAATGCAA..................................................................................................................2011.00101
...................................................................................................................................................................................................................................................................................................................................................................ATA--AGGATGTACGAATGC....................................................................................................................1811.00110
.................................................................................................................................................................................................CCATGCCCTAAGCCTTATC--TT-ATA-----..........................................................................................................................................................................................................................................................................2411.00110
.........................................GTTGGATTGTAAAAA---------AG--AACT..................................................................................................................................................................................................................................................................................................................................................................................................................................2111.00110
............................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGAA-CTACAGT------------CGCATCAC.............2111.00110
....................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCATTTAATTAGGCC-G-----TCA............................................2111.00110
...............................................................................................................................................................................................................................................................................................................................................................CACTATA--AGGATGTACGAATG.....................................................................................................................2111.00110
.............................................................................................................................................................................................................................................................................................................................................................................................................................................ATTAGGCC-G-----TCAGAA-CTACA...................................2011.00110

Generated: 05/17/2015 at 10:29 PM