ID:

der_497

 Coordinate:

scaffold_4770:252933-252958 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

intron [Dere\GG11839-in]; CDS [Dere\GG11839-cds]; exon [dere_GLEANR_1190:2]; exon [dere_GLEANR_1190:3]; CDS [Dere\GG11839-cds]

No Repeatable elements found

Sense Strand Reads

##################################################--------------------------##################################################
GAGACGCAGGAGGACGGTCCCTGCAAGTGTAATAAGACGCGATCAGGAGGGTCAGTGGAGTCATTGGTTGGTCAAGGTGGTCCGGACTCACGGACGATACACCTCCCCACCATAACATCCTAAGTC
**************************************************.((((((....)))))).........************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528801
follicle cells		 M055
female body
 V107
male body		 M057
embryo
...........................TGTAATAAGACGCGATCAGGAGGGTCA........................................................................ 27 0 1 20.00 20 20 0 0 0
...........................TGTAATAAGACGCGATCCGGAGGGTCA........................................................................ 27 1 1 4.00 4 4 0 0 0
...........................TGTAATAAGACGCGATCAGGAGGG........................................................................... 24 0 1 2.00 2 2 0 0 0
.....................TGCAAGTGTAATAAGACGCGATCAGG............................................................................... 26 0 1 1.00 1 0 1 0 0
.......................................................TGGAGTCATTGGTTGGTCAAGGTGG.............................................. 25 0 20 0.25 5 5 0 0 0
................................................................................TCCGGACTCACGGACGATACACCTCCC................... 27 0 20 0.25 5 0 5 0 0
................................................................................TCCGGACTCACGGACGATACACCTCC.................... 26 0 20 0.15 3 0 3 0 0
...........................................................GTCATTGGTTGGTCAAGGTGG.............................................. 21 0 20 0.10 2 0 0 2 0
.......................................................TGGAGTCATTGGTTGGTCAAGGGGG.............................................. 25 1 20 0.10 2 2 0 0 0
..............................................................ATTGGTTGGTCAAGGTGGTCC........................................... 21 0 20 0.10 2 0 0 2 0
..........................................................AGTCATTGGTTGGTCAAGG................................................. 19 0 20 0.10 2 0 0 2 0
......CAGGAGGACGGTCCCTGCAAATG................................................................................................. 23 1 15 0.07 1 0 1 0 0
....................................................................................GACTCACGGACGATACACCTCCCCAC................ 26 0 20 0.05 1 0 1 0 0
.....................................................AGTGGAGTCATTGGTTGGTCAAGG................................................. 24 0 20 0.05 1 0 1 0 0
....................................................................................GACTCACGGACGATACACCTCCCCACC............... 27 0 20 0.05 1 0 0 0 1
.......................................................TGGGGTCATTGGTTGGTCAAGGTGG.............................................. 25 1 20 0.05 1 1 0 0 0
.......................................................TGGAGTCATTGGTTCGTCAAGGTGGGC............................................ 27 2 20 0.05 1 0 1 0 0
....................................................................TGGTCAAGGTGGTCCGGCCTCACG.................................. 24 1 20 0.05 1 0 1 0 0
............................................................TCATTGGTTGGTCAAGGTGGTCCG.......................................... 24 0 20 0.05 1 0 1 0 0
............................................................TCATTGGTTGGTCAAGGTGGT............................................. 21 0 20 0.05 1 0 0 1 0
............................................................TCATTGGTTGGTCAAGGTGGTCCGGA........................................ 26 0 20 0.05 1 0 0 1 0
.........................................ATCAGGAGGGTCAGTGGAG.................................................................. 19 0 20 0.05 1 0 0 1 0
.....................................................................GGTCAAGGTGGTCCGGACTCACG.................................. 23 0 20 0.05 1 0 1 0 0
...................................................................TTGGTCAAGGTGGTCCGGACTCACGG................................. 26 0 20 0.05 1 0 1 0 0
................................................................................TCCGGACTCACGGACGACACACCTCC.................... 26 1 20 0.05 1 0 1 0 0
.......................................................TGGAGTCATTGGTTGGTCAAGG................................................. 22 0 20 0.05 1 0 0 1 0
.........................................................GAGTCATTGGTTGGTCAAGG................................................. 20 0 20 0.05 1 0 0 1 0
...............................................................TTGGTTGGTCAAGGTGGTCT........................................... 20 1 20 0.05 1 0 0 1 0
..................................................................GTTGGTCAAGGTGGTCCGGACTCAA................................... 25 1 20 0.05 1 0 1 0 0
.......................................................TGGAGTCATTGGTTGGTCAAGGTG............................................... 24 0 20 0.05 1 0 0 1 0
...............................................................TGGGTTGGTCAAGGTGGTCCGG......................................... 22 1 20 0.05 1 0 1 0 0
..........................................................AGTCATTGGTTGGTCAAGGTG............................................... 21 0 20 0.05 1 0 0 1 0
...................................................TCAGTGGAGTCATTGGTTGGTCAAGG................................................. 26 0 20 0.05 1 0 1 0 0
.............................................................CATTGGTTGGTCAAGGGGGTC............................................ 21 1 20 0.05 1 0 1 0 0

Anti-sense strand reads

CTCTGCGTCCTCCTGCCAGGGACGTTCACATTATTCTGCGCTAGTCCTCCCAGTCACCTCAGTAACCAACCAGTTCCACCAGGCCTGAGTGCCTGCTATGTGGAGGGGTGGTATTGTAGGATTCAG
**************************************************.((((((....)))))).........************************************************** 		Read size # Mismatch Hit Count Total Norm Total M055
female body
 V107
male body		 GSM1528801
follicle cells		 M057
embryo
 V108
head
....................GACGTTCACATTATTCTGCGCTAGTCCT.............................................................................. 28 0 1 1.00 1 1 0 0 0 0
..........TCCTGCCAGGGACGTTCACATTATT........................................................................................... 25 0 1 1.00 1 1 0 0 0 0
........CCTCCTGCCAGGGACGTTCACATTAT............................................................................................ 26 0 1 1.00 1 1 0 0 0 0
................................................CCCAGTCACCTCAGTAACCAACCAGT.................................................... 26 0 20 0.85 17 17 0 0 0 0
..............................................................................................GCTATGTGGAGGGGTGGTATTGT......... 23 0 20 0.55 11 11 0 0 0 0
.................................................................................................ATGTGGAGGGGTGGTATTGTAGGAT.... 25 0 20 0.45 9 4 5 0 0 0
...............................................................AACCAACCAGTTCCACCAGGCCTGAGT.................................... 27 0 20 0.45 9 9 0 0 0 0
.....................................................................CCAGTTCCACCAGGCCTGAGTGCCT................................ 25 0 20 0.40 8 7 0 0 1 0
........................................................................GTTCCACCAGGCCTGAGTGCCTGCT............................. 25 0 20 0.35 7 0 0 7 0 0
...........................................................................CCACCAGGCCTGAGTGCCTGCTATGT......................... 26 0 20 0.30 6 5 0 0 1 0
..........................................................................................GCCTGCTATGTGGAGGGGTGGTAT............ 24 0 20 0.30 6 5 1 0 0 0
.................................................................................................ATGTGGAGGGGTGGTATTGT......... 20 0 20 0.30 6 6 0 0 0 0
....................................................................................................TGGAGGGGTGGTATTGTAGGAT.... 22 0 20 0.30 6 6 0 0 0 0
...........................................................CAGTAACCAACCAGTTCCACCAGGCCT........................................ 27 0 20 0.30 6 6 0 0 0 0
..................................................................................................TGTGGAGGGGTGGTATTGTAGGAT.... 24 0 20 0.25 5 5 0 0 0 0
...................................................................................................GTGGAGGGGTGGTATTGTAGGATT... 24 0 20 0.25 5 5 0 0 0 0
...........................................................................................CCTGCTATGTGGAGGGGTGGTATTGT......... 26 0 20 0.20 4 3 1 0 0 0
................................................................................AGGCCTGAGTGCCTGCTATGT......................... 21 0 20 0.20 4 0 3 0 0 1
....................................................................ACCAGTTCCACCAGGCCTGAGTGCCT................................ 26 0 19 0.16 3 3 0 0 0 0
................................................CCCAGTCACCTCAGTAACCAACCAGTTC.................................................. 28 0 19 0.16 3 3 0 0 0 0
................................................CCCAGTCACCTCAGTAACCAACCAGTT................................................... 27 0 20 0.15 3 3 0 0 0 0
......................................................................................................GAGGGGTGGTATTGTAGGAT.... 20 0 20 0.15 3 2 1 0 0 0
............................................................AGTAACCAACCAGTTCCACCAGGCCT........................................ 26 0 20 0.15 3 3 0 0 0 0
.....................................................................CCAGTTCCACCAGGCCTGAGTGCCTGCT............................. 28 0 20 0.15 3 2 0 1 0 0
.........................................................CTCAGTAACCAACCAGTTCCACCAGGCCT........................................ 29 0 18 0.11 2 2 0 0 0 0
................................................CCCAGTCACCTCAGTAACCAACCAG..................................................... 25 0 20 0.10 2 2 0 0 0 0
.....................................................................CCAGTTCCACCAGGCCTGAGT.................................... 21 0 20 0.10 2 2 0 0 0 0
................................................................ACCAACCAGTTCCACCAGGCCTGAGT.................................... 26 0 20 0.10 2 2 0 0 0 0
............................................................................................CTGCTATGTGGAGGGGTGGTATTGT......... 25 0 20 0.10 2 2 0 0 0 0
...........................................................................................CCTGCTATGTGGAGGGGTGGTAT............ 23 0 20 0.10 2 0 2 0 0 0
...........................................................CAGTAACCAACCAGTTCCACCAGGC.......................................... 25 0 20 0.10 2 2 0 0 0 0
.......................................................................AGTTCCACCAGGCCTGAGTGCCTGCT............................. 26 0 20 0.10 2 2 0 0 0 0
.............................................................................ACCAGGCCTGAGTGCCTGCTATGT......................... 24 0 20 0.10 2 2 0 0 0 0
..............................................CTCCCAGTCACCTCAGTAACCAACCAGTT................................................... 29 0 15 0.07 1 1 0 0 0 0
................................................CCCAGTCACCTCAGTAACCAACCAGTTCC................................................. 29 0 17 0.06 1 1 0 0 0 0
..........................................................TCAGTAACCAACCAGTTCCACCAGGCCT........................................ 28 0 19 0.05 1 1 0 0 0 0
..........................................................................TCCACCAGGCCTGAGTGCCTGCT............................. 23 0 20 0.05 1 1 0 0 0 0
........................................................................GTTCCACCAGGCCTGAGTGCCTGC.............................. 24 0 20 0.05 1 1 0 0 0 0
.............................................................................................TGCTATGAGGAGGGGTGGTATTG.......... 23 1 20 0.05 1 1 0 0 0 0
............................................................AGTAACCAACCAGTTCCACCAGGC.......................................... 24 0 20 0.05 1 1 0 0 0 0
......................................................CACCTCAGTAACCAACCCGTTCCAC............................................... 25 1 20 0.05 1 1 0 0 0 0
.......................................GCTAGTCCTCCCAGTCACCT................................................................... 20 0 20 0.05 1 1 0 0 0 0
................................................................ACCAACCAGTTCCACCAGGCCTG....................................... 23 0 20 0.05 1 1 0 0 0 0
..................................................................................................TGTGGAGGGGTGGTATTGTA........ 20 0 20 0.05 1 0 1 0 0 0
..........................................................................................GCCTGGTATGTGGAGGGGTTGTATTGT......... 27 2 20 0.05 1 1 0 0 0 0
..............................................................................................GCTACGTGGAGGGGTGGTAT............ 20 1 20 0.05 1 0 1 0 0 0
.........................................................CTCAGTATCCAACCAGTTCCACCAGGC.......................................... 27 1 20 0.05 1 1 0 0 0 0
.....................................................................................................GGAGGGGTGGTATTGTAGGATT... 22 0 20 0.05 1 1 0 0 0 0
........................................................................GTTCCCCCAGGCCTGAGTGCCTGCT............................. 25 1 20 0.05 1 0 0 1 0 0
.......................................................................................................AGGGGTGGTATTGTAGGAT.... 19 0 20 0.05 1 0 1 0 0 0
.........................................................CTCAGTAACCAACCAGTTCCACCAGGC.......................................... 27 0 20 0.05 1 1 0 0 0 0
....................................................GTCACCTCAGTAACCAACCAGTT................................................... 23 0 20 0.05 1 1 0 0 0 0
.............................................................ACAACCAACCAGTTCCACCAGGCCT........................................ 25 2 20 0.05 1 1 0 0 0 0
.............................................................................................TGCTATGGGGAGGGGTGGTATTGT......... 24 1 20 0.05 1 1 0 0 0 0
....................................................................................CTGAGTGCCTGCTATGTGGAGGGGT................. 25 0 20 0.05 1 1 0 0 0 0
..........................................................................TCCACCAGGCCTGAGTGCCTGCTATG.......................... 26 0 20 0.05 1 1 0 0 0 0
.....................................GCGCTAGTCCTCCCAGTCACCT................................................................... 22 0 20 0.05 1 1 0 0 0 0
......................................CGCTAGTCCTCCCAGTCACCTCAGT............................................................... 25 0 20 0.05 1 1 0 0 0 0
..............................................................TAACCAACCAGTTCCACCAGGCCT........................................ 24 0 20 0.05 1 1 0 0 0 0
............................................TCCTCCCAGTCACCTCAGTAAC............................................................ 22 0 20 0.05 1 1 0 0 0 0
.........................................................CTCAGTAACCAACCAGTTCCACCAG............................................ 25 0 20 0.05 1 1 0 0 0 0
................................................CCCAGTCACCTCAGTAACCAACCATT.................................................... 26 1 20 0.05 1 1 0 0 0 0
................................................CCGAGTCACCTCAGTAACCAACTAGTT................................................... 27 2 20 0.05 1 0 1 0 0 0
...............................................................AACCAACCAGTTCCACCAGGCCT........................................ 23 0 20 0.05 1 1 0 0 0 0
...........................................GTCCTCCCAGTCACCTCAGTAACC........................................................... 24 0 20 0.05 1 1 0 0 0 0
......................................................................................GAGTGCCTGCTATGTGGAGGGGT................. 23 0 20 0.05 1 1 0 0 0 0
............................................................................................CTGCTATGGGGAGGGGTGGTATTGT......... 25 1 20 0.05 1 1 0 0 0 0
....................................................................ACCAGTTCCACCAGGCCTGAGTGC.................................. 24 0 20 0.05 1 1 0 0 0 0
..........................................................GCACTAACCAACCAGTTCCACCAGGCCT........................................ 28 2 20 0.05 1 1 0 0 0 0
..........................................................................................ACCTGCTATGTGGAGGGGTGGTAT............ 24 1 20 0.05 1 1 0 0 0 0
............................................................AGTAACCAACCAGTTTCACCAGGC.......................................... 24 1 20 0.05 1 1 0 0 0 0
...................................................AGTCACCTCAGTAACCAACCAGTTCG................................................. 26 1 20 0.05 1 1 0 0 0 0
........................................................................GTTCCACCCGGCCTGAGTGCCTGCT............................. 25 1 20 0.05 1 0 0 1 0 0
.........................................................................................TGCCTGCTATGGGGAGGGGTGGTAT............ 25 1 20 0.05 1 1 0 0 0 0
..............................................................................CCAGGCCTGAGTGCCTGCTATGTGGAG..................... 27 0 20 0.05 1 0 0 0 0 1
................................................................ACCAACCAGTTCCACCAGGCCTGAGTG................................... 27 0 20 0.05 1 1 0 0 0 0
.................................................................CCAACCAGTTCCACCAGGCCTGAGT.................................... 25 0 20 0.05 1 1 0 0 0 0
.......................................................ACCTCAGTAACCAACCAGT.................................................... 19 0 20 0.05 1 1 0 0 0 0
.......................................GCTAGTCCTCCCAGTCACCTCAGT............................................................... 24 0 20 0.05 1 1 0 0 0 0
..................................................................................................TGTGGAGGGGTTGTATTGTAGGAT.... 24 1 20 0.05 1 1 0 0 0 0
.............................................................GTAACCAACCAGTTCCACCAGGCCTGAGT.................................... 29 0 20 0.05 1 1 0 0 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4770:252883-253008 - der_497 GAGACGCAGGA------------GGACGGTC-CCTGCAAGTGTAATAA---GACGCGAT--CAGGAGGGTCAGTGGAGTCATTGGTTGGTCAAGGTGGTC----C----GGAC--------------T-C-ACGGACGATACACCTCCCCACCATAACATCCTAAGTC
droYak3 v2_chr2h_random_004:49450-49574 - AAAGTAAAGGA----CAAGCGGT-----------------CACAAGGACCTGGCGTGGT--CAGAAGGGACAATTGAGTCATTCGTCGGCAAAGGTGGCG----CT--AT-----------CTTGACT-C-GCGAACGAAACATCCTC-CCCCATAACATCCTAAGCC
droSec2 scaffold_197:25015-25140 + CAG------GA------------GGA------------AAGGCAAGAACCCGACGTGTC--GACAAGGGTCAGTGGAGTCAGTGGTCAGTATAGGTGGTC----CC--AGGACGAGCGTTGCCTCG-CCC-CAGGACGATACACCCTA-CCCCATAACATCCTAAAC-
droSim2 2r:2001608-2001747 + GCAG-----AA------------GGACCTTCACAAGCTAAGGCAAGAACCCGACGTGAC--CATAAGGGTCAGTGGAGTCAGTGGTCGGTATAGGTGGTC----CC--AGGACGAGCGTTGCCTCG-CAC-CAGGACGATACACCCTAACCCCATAACATCCTAAAC-
dm3 chr2R:961581-961686 + GAGTG----GA------------GG------------------AAGGACCTGGCGTGTCAGGTCAAGGGTCAGTGGAGTCAGTGGTCGGCAAAGGTGGTC----CC--AGGCCGAGCGTTG---------------------ACCCTG-CCCCATAACATCCTGATCC
droTak1 scf7180000410677:7685-7729 + GCGAG---AGAAGGACGAGCTAC--------------CGGCAGGGT------------A--AGCGCGGATCAAGAG--------------------------------------------------------------------------------------------
droEle1 scf7180000490733:101679-101776 + GCTCA---GGG------------AG----------------------ACCTTGC------------------GTGGAGTCAGCGAT----AAAGGTGGCTGGACGAAGAGGTCGAACCTAGTTCTACC-TGCTAGGCGATACACCTTGCCGACACAAT----------
droFic1 scf7180000453175:18013-18066 - ATGGCT--------------------------CCAGCAAAGCCAATAA---GATACGAC--CAAATTGGTCACTGGGTTCAGTGG-----------------------------------------------------------------------------------
droAna3 scaffold_10294:1729-1741 - TCGACTCAGGA------------GG-----------------------------------------------------------------------------------------------------------------------------------------------

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
GAGACGCAGGA------------GGACGGTC-CCTGCAAGTGTAATAA---GACGCGAT--CAGGAGGGTCAGTGGAGTCATTGGTTGGTCAAGGTGGTC----C----GGAC--------------T-C-ACGGACGATACACCTCCCCACCATAACATCCTAAGTCSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
........................................TGTAATAA---GACGCGAT--CAGGAGGGTCA................................................................................................27120.002000000020
........................................TGTAATAA---GACGCGAT--CAGGAGGG...................................................................................................2412.0020000002
..................................TGCAAGTGTAATAA---GACGCGAT--CAGG.......................................................................................................2611.0011000000
.........................................................................TGGAGTCATTGGTTGGTCAAGGTGG......................................................................25200.2550000005
..................................................................................................TC----C----GGAC--------------T-C-ACGGACGATACACCTCCC...................27200.2555000000
..................................................................................................TC----C----GGAC--------------T-C-ACGGACGATACACCTCC....................26200.1533000000
.............................................................................GTCATTGGTTGGTCAAGGTGG......................................................................21200.1020000200
................................................................................ATTGGTTGGTCAAGGTGGTC----C----...........................................................21200.1020000200
............................................................................AGTCATTGGTTGGTCAAGG.........................................................................19200.1020000200
..............................................................................................................GAC--------------T-C-ACGGACGATACACCTCCCCAC................26200.0511000000
.......................................................................AGTGGAGTCATTGGTTGGTCAAGG.........................................................................24200.0511000000
..............................................................................................................GAC--------------T-C-ACGGACGATACACCTCCCCACC...............27200.0510100000
..............................................................................TCATTGGTTGGTCAAGGTGGTC----C----G..........................................................24200.0511000000
..............................................................................TCATTGGTTGGTCAAGGTGGT.....................................................................21200.0510000100
..............................................................................TCATTGGTTGGTCAAGGTGGTC----C----GGA........................................................26200.0510000100
.........................................................AT--CAGGAGGGTCAGTGGAG..........................................................................................19200.0510000100
.......................................................................................GGTCAAGGTGGTC----C----GGAC--------------T-C-ACG..................................23200.0511000000
.....................................................................................TTGGTCAAGGTGGTC----C----GGAC--------------T-C-ACGG.................................26200.0511000000
.........................................................................TGGAGTCATTGGTTGGTCAAGG.........................................................................22200.0510000100
...........................................................................GAGTCATTGGTTGGTCAAGG.........................................................................20200.0510000100
.................................................................................TTGGTTGGTCAAGGTGGTC----T----...........................................................20200.0510000100
....................................................................................GTTGGTCAAGGTGGTC----C----GGAC--------------T-C-AA...................................25200.0511000000
.........................................................................TGGAGTCATTGGTTGGTCAAGGTG.......................................................................24200.0510000100
............................................................................AGTCATTGGTTGGTCAAGGTG.......................................................................21200.0510000100
.....................................................................TCAGTGGAGTCATTGGTTGGTCAAGG.........................................................................26200.0511000000
droYak3
AAAGTAAAGGA----CAAGCGGT-----------------CACAAGGACCTGGCGTGGT--CAGAAGGGACAATTGAGTCATTCGTCGGCAAAGGTGGCG----CT--AT-----------CTTGACT-C-GCGAACGAAACATCCTC-CCCCATAACATCCTAAGCCSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
No Reads
droSec2
CAG------GA------------GGA------------AAGGCAAGAACCCGACGTGTC--GACAAGGGTCAGTGGAGTCAGTGGTCAGTATAGGTGGTC----CC--AGGACGAGCGTTGCCTCG-CCC-CAGGACGATACACCCTA-CCCCATAACATCCTAAAC-SizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
................................................................................................................CGAGCGTTGCCTCG-CCC-CAGGACGA.............................25202.3046330121
................................................................................................................CGAGCGTTGCCTCG-CCC-CAGGACG..............................24201.4529113150
................................................................................................................CGAGCGTTGCCTCG-CCC-CAGGACGAT............................26200.85179242
..............................................................................TCAGTGGTCAGTATAGGTGGTC----C...............................................................2320.5011000
...............................................................................CAGTGGTCAGTATAGGTGGTC----CC--AGG.........................................................2620.5011000
................................................................................................................CGAGCGTTGCCTCG-CCC-CAGGACGATAC..........................28200.1533000
................................................................................................................CGAGCGTTGCCTCG-CCC-CAGGA................................22200.1532010
................................................................................................................CGAGCGTTGCCTCG-CCC-CAGGACGATA...........................27200.1020020
........................................................................................GTATAGGTGGTC----CC--AGGACGA.....................................................21140.0711000
...........................................................................................TAGGTGGTC----CC--AGGACGAGCGTTGCC.............................................26150.0711000
...........................................................................................................................................TACACCCTA-CCCCATAACATCCTA....24150.0711000
...........................................................................................TAGGTGGTC----CC--AGGACGAGCGTTGCCT............................................27150.0710010
.....................................................................................................................................GGACGATACACCCTA-CCCCAT.............21180.0611000
....................................................................................................................CGTTGCCTCG-CCC-CAGGACGA.............................21200.0511000
...............................................................................................TGGTC----CC--AGGACGAGCGTTGCC.............................................22200.0510100
.................................................................................................................GAGCGTTGCCTCG-CCC-CAGGAC...............................22200.0511000
...............................................................................................TGGTC----CC--AGGACGAGCGTTGC..............................................21200.0510001
................................................................................................................CGAGCGTTGCCTCG-CCC-CAGGATT..............................24200.0511000
................................................................................................................CGAGCGTTGCCTCG-CCC-CAGGACGC.............................25200.0510001
................................................................................................................CGAGCGTTGCCTCG-CCC-CAGGAAA..............................24200.0510010
droSim2
GCAG-----AA------------GGACCTTCACAAGCTAAGGCAAGAACCCGACGTGAC--CATAAGGGTCAGTGGAGTCAGTGGTCGGTATAGGTGGTC----CC--AGGACGAGCGTTGCCTCG-CAC-CAGGACGATACACCCTAACCCCATAACATCCTAAAC-SizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................CGAGCGTTGCCTCG-CAC-CAGGACGA.............................25169.0069010310131153140000
.....................................TAAGGCAAGAACCCGACGTGAC--CATA.......................................................................................................26135.0035000000520000253000
............................TTCACAAGCTAAGGCAAGAACCCGACG.................................................................................................................27127.0027000000416320020000
................................................................................................................CGAGCGTTGCCTCG-CAC-CAGGACG..............................2419.00900000010016010000
................................................................................................................CGAGCGTTGCCTCG-CAC-CAGGAC...............................2317.00700010000006000000
..................................AGCTAAGGCAAGAACCCGACGTG...............................................................................................................2376.4345000000100044000000
................................................................................................................CGAGCGTTGCCTCG-CAC-CAGGA................................2216.00600010000005000000
.................................AAGCTAAGGCAAGAACCCGACGTG...............................................................................................................2476.0042000000110270310000
............................TTCACAAGCTAAGGCAAGAACCCGA...................................................................................................................2516.00600000000210030000
.....................................TAAGGCAAGAACCCGACGTGAC--CAT........................................................................................................2515.00500000000000032000
.......................................................................................................................TGCCTCG-CAC-CAGGACGATACACCC......................2524.50900000010000080000
.....................................TAAGGCAAGAACCCGACGTGAC--CATAA......................................................................................................2714.00400000000000040000
..........................................................................................ATAGGTGGTC----CC--AGGA........................................................1664.002400000096009000000
.........................................................................TGGAGTCAGTGGTCGGTATAGGTGG......................................................................2553.6018000000001010160000
.................................AAGCTAAGGCAAGAACCCGACGT................................................................................................................2373.29230000000001100120000
................................................................................................................CGAGCGTTGCCTCG-CAC-CAGG.................................2113.00300000000003000000
................................................................................................................CGAGCGTTGCCTCG-CAC-CAGGACGATAC..........................2813.00300000000003000000
.................................AAGCTAAGGCAAGAACCCGACGTGAT--...........................................................................................................2613.00300000000000030000
.................................AAGCTAAGGCAAGAACCCGACGTGA..............................................................................................................2513.00300000000000030000
................................................................................................................CGAGCGTTGCCTCG-CAC-CAGGACGAT............................2613.00300000000003000000
...............................................................TAAGGGTCAGTGGAGTCAGTGGTCGG...............................................................................26152.6740000000203330272000
.....................................................................TCAGTGGAGTCAGTGGTCGGTATA...........................................................................2452.201100000002201051000
.................................................................AGGGTCAGTGGAGTCAGTGGTCGGTA.............................................................................26202.1042000000010200318000
..........A------------GGACCTTCACAAGCTAAGGCAAGAACC......................................................................................................................2812.00200000000020000000
....................................CTAAGGCAAGAACCCGACGTGAC--CATAA......................................................................................................2812.00200000000000011000
...............................ACAAGCTAAGGCAAGAACCCGACGTGAC--...........................................................................................................2812.00200000000000020000
................................................................................................................CGAGCGTTGCCTCG-CAC-CAGGACGATA...........................2712.00200000001000010000
................................................................................................................CGAGCGTTGCCTCG-CAC-CAGGACGT.............................2512.00200000000001010000
................................................................................................................CGAGCGTTGCCTCG-CA.......................................1612.00200000000002000000
..........................................CAAGAACCCGACGTGAC--CATAAGGGT..................................................................................................2612.00200010000001000000
.....................................TAAGGCAAGAACCCGACGTGAC--CA.........................................................................................................2412.00200000000000020000
.............................TCACAAGCTAAGGCAAGAACCCGACG.................................................................................................................2612.00200000011000000000
............................TTCACAAGCTAAGGCAAGAACCCGAC..................................................................................................................2612.00200000002000000000
..................................AGCTAAGGCAAGAACCCGACGTGAC--C..........................................................................................................2612.00200000001001000000
......................................AAGGCAAGAACCCGACGTGAC--CAT........................................................................................................2412.00200000000000020000
..........................................CAAGAACCCGACGTGAC--CATAAGG....................................................................................................2412.00200100010000000000
.................................................................AGGGTCAGTGGAGTCAGTGGTCGGT..............................................................................25201.8537000000003210283000
.........................................................................TGGAGTCAGTGGTCGGTATAGGTG.......................................................................2451.60800000000002150000
...............................................................TAAGGGTCAGTGGAGTCAGTGGT..................................................................................23191.5329000000214121000000
.......................................................................AGTGGAGTCAGTGGTCGGTAT............................................................................2161.50900000000000027000
.................................AAGCTAAGGCAAGAACCCGACG.................................................................................................................2271.431000000001117000000
..................................AGCTAAGGCAAGAACCCGACG.................................................................................................................2171.4310000000000010000000
.........................................................................TGGAGTCAGTGGTCGGTATAGGTGGT.....................................................................2651.40700000000002050000
.................................AAGCTAAGGCAAGAACCCGACGTT...............................................................................................................2471.29900000001031040000
..............................................................................TCAGTGGTCGGTATAGGTGGT.....................................................................2151.20600000000000024000
.........................................................................TGGAGTCAGTGGTCGGTATAGGTGGTC----................................................................2751.20600000012010020000
..........................................................................................ATAGGTGGTC----CC--AGGACG......................................................1861.17700007000000000000
..................................AGCTAAGGCAAGAACCCGACGT................................................................................................................2271.14800000000008000000
................................................................AAGGGTCAGTGGAGTCAGTGGTCGG...............................................................................25201.0521000000100030170000
..........................................CAAGAACCCGACGTGAC--CATAA......................................................................................................2211.00100000000000010000
.............................................................................GTCAGTGGTCGGTATAGGTGG......................................................................2151.00500000010001012000
...................................................GACGTGAC--CATAAGGGTCAGTGGAGT.........................................................................................2611.00100000000001000000
.................................AAGCTAAGGCAAGAACCCGACGTGAA--...........................................................................................................2611.00100000000000010000
..........................CCTTCACAAGCTAAGGCAAGAACCCGACG.................................................................................................................2911.00100000000000010000
.......................................AGGCAAGAACCCGACGTGAC--CATAA......................................................................................................2511.00100000000000010000
................................................................................................................CGAGCGTTGCCTCG-CAC-CAGGACGTAC...........................2711.00100000000001000000
.........................................................................................TATAGGTGGTC----CC--AGGA........................................................1761.00600000022002000000
.......................................................TGAC--CATAAGGGTCAGTGGAGTCAGTGG...................................................................................2811.00100000001000000000
GCAG-----AA------------GGACCTTCACAAGCT..................................................................................................................................2111.00100000000010000000
.............................................................CATAAGGGTCAGTGGAGTCAG......................................................................................2171.00700000000010024000
...................................................GACGTGAC--CATAAGGGT..................................................................................................1711.00100000000001000000
..............................CACAAGCTAAGGCAAGAACCCGACG.................................................................................................................2511.00100000001000000000
..................................AGCTAAGGCAAGAACCCGACGTGA..............................................................................................................2411.00100010000000000000
.......................................AGGCAAGAACCCGACGTGAC--CATAAGGG...................................................................................................2811.00100000000100000000
............................................AGAACCCGACGTGAC--CATA.......................................................................................................1911.00100000000001000000
................................................................................................................CGAGCGTTGCCTCG-CAC-CAGGACGAGC...........................2711.00100000000001000000
.................................AAGCTAAGGCAAGAACCCGACGTGAC--CA.........................................................................................................2811.00100000000000010000
................................CAAGCTAAGGCAAGAACCCGACGTGAC--CA.........................................................................................................2911.00100000000000010000
..........................................CAAGAACCCGACGTGAC--CATAATAA...................................................................................................2511.00100000000000010000
..................................AGCTAAGGCAAGAACCCGACGTGAC--...........................................................................................................2511.00100000000001000000
..........................................CAAGAACCCGACGTGAC--CATAAGTTA..................................................................................................2611.00100000000000010000
................................................................................................................CGAGCGTTGCCTCG-CAC-CAGGACGATACA.........................2911.00100000000001000000
..............................CACAAGCTAAGGCAAGAACCCGACGTG...............................................................................................................2711.00100000000010000000
.....................................TAAGGCAAGAACCCGACGTGAC--CATAAGGG...................................................................................................3011.00100000001000000000
......................................AAGGCAAGAACCCGACGTGAC--CATAAGGG...................................................................................................2911.00100000001000000000
................................................................................................................CGAGCGTTGCCTCG-CAC-CAGGAT...............................2311.00100000000001000000
......................................AAGGCAAGAACCCGACGTGAC--CATA.......................................................................................................2511.00100000000000010000
.......................................................TGAC--CATAAGGGTCAGTGGAGT.........................................................................................2211.00100000000010000000
......................................AAGGCAAGAACCCGACGTGAC--CATAT......................................................................................................2611.00100000000000010000
.............................................................................................................................................CACCCTAACCCCATAACATCCTAAAC-2641.00400000000000040000
.....................................TAAGGCAAGAACCCGACGTGAC--CATAAG.....................................................................................................2811.00100000010000000000
......................................AAGGCAAGAACCCGACGTGAC--CATAA......................................................................................................2611.00100000000000010000
.................................AAGCTAAGGCAAGAACCCGACGTA...............................................................................................................2470.86600000000000060000
.................................................................AGGGTCAGTGGAGTCAGTGGTCGG...............................................................................24200.8517000000010120121000
...............................................................................................................................................CCCTAACCCCATAACATCCTAAAC-2440.75300000000000030000
..............................................................................TCAGTGGTCGGTATAGGTGG......................................................................2050.60300000000000012000
...........................................................................GAGTCAGTGGTCGGTATAGGTG.......................................................................2250.60300000000000030000
..................................................................................TGGTCGGTATAGGTGGTC----CC--AGGA........................................................2450.60300000001000020000
.................................................................................GTGGTCGGTATAGGTGGTC----CC--............................................................2150.60300000011000010000
...............................................................TAAGGGTCAGTGGAGTCAGTGGTC.................................................................................24170.53900000011304000000
.................................AAGCTAAGGCAAGAACCCGACGTGAT--T..........................................................................................................2720.50100000000000010000
.................................AAGCTAAGGCAAGAACCCGACGTGAC--T..........................................................................................................2720.50100000000000010000
.................................................................................................................GAGCGTTGCCTCG-CAC-CAGGAC...............................2220.50100000001000000000
.......................................................................................................................TGCCTCG-CAC-CAGGACGATACACCCTA....................2720.50100000000000010000
............................................................................................AGGTGGTC----CC--AGGACGAGCGT.................................................21200.5010000000000000010000
.................................................................................................................GAGCGTTGCCTCG-CAC-CAGGACT..............................2320.50100000000001000000
........................................................................GTGGAGTCAGTGGTCGGTAT............................................................................2060.50300000001000002000
...................................................................................................................GCGTTGCCTCG-CAC-CAGGACGACGA..........................2520.50100000000001000000
..................................................................................................................AGCGTTGCCTCG-CAC-CAGGACG..............................2220.50100000000001000000
.................................................................................................................GAGCGTTGCCTCG-CAC-CAGG.................................2020.50100000000001000000
.........................................................................TGGAGTCAGTGGTCGGTATAGG.........................................................................2260.50300000000003000000
...............................................................TAAGGGTCAGTGGAGTCAGTGGTCGGT..............................................................................27150.47700000000101050000
.....................................................................TCAGTGGAGTCAGTGGTCGGT..............................................................................21200.45900000000100044000
.................................AAGCTAAGGCAAGAACCCGACGTGC..............................................................................................................2570.43300000000001020000
...............................................................TAAGGGTCAGTGGAGTCAGTGG...................................................................................22190.42800000031121000000
.........................................................................TGGAGTCAGTGGTCGGTATAGGT........................................................................2350.40200000000002000000
.........................................................................TGGAGTCAGTGGTCGGTATAGGTGGTC----C...............................................................2850.40200000011000000000
.............................................................................GTCAGTGGTCGGTATAGGTGGT.....................................................................2250.40200000000000020000
............................................................................AGTCAGTGGTCGGTATAGGTG.......................................................................2150.40200000001000001000
.............................................................................GTCAGTGGTCGGTATAGGTT.......................................................................2050.40200000000000002000
...........................................................................................................................................TACACCCTAACCCCATAACATC.......2250.40200000000000020000
........................................................................................................................................CGATACACCCTAACCCCATAACATC.......2550.40200000000000002000
.....................................................................................TCGGTATAGGTGGTC----CC--AGGA........................................................2150.40200000001010000000
..........................................................................GGAGTCAGTGGTCGGTATAGGTGGT.....................................................................2550.40200000000000002000
.....................................................................................TCGGTATAGGTGGTC----CC--AGGAA.......................................................2280.38300000011010000000
..................................AGCTAAGGCAAGAACCC.....................................................................................................................1780.38300000010002000000
......................................................................CAGTGGAGTCAGTGGTCGGTA.............................................................................21200.35700000000001006000
...........................................................................GAGTCAGTGGTCGGTATAGG.........................................................................2060.33200000001001000000
.......................................................................AGTGGAGTCAGTGGTCGGTA.............................................................................20200.30600000012000012000
.....................................TAAGGCAAGAACCCGACGTG...............................................................................................................2070.29200000010001000000
...............................................................TAAGGGTCAGTGGAGTCAGTG....................................................................................21190.26500000000102002000
.................................AAGCTAAGGCAAGAACCCGAC..................................................................................................................2180.25200000000000020000
....................................................................GTCAGTGGAGTCAGTGGTCGG...............................................................................21200.25500000010300010000
..................................AGCTAAGGCAAGAACC......................................................................................................................1680.25200000000002000000
.....................................................................TCAGTGGAGTCAGTGGTCGGTATAGGT........................................................................2740.25100000000010000000
.................................................................................GTGGTCGGTATAGGTGGTC----CC--AGGACGCTA...................................................3050.20100000000000010000
.............................................................................GTCAGTGGTCGGTATAGGTGGTC----C...............................................................2450.20100000010000000000
..............................................................................TCAGTGGTCGGTATAGGTGGTC----................................................................2250.20100000000000010000
................................................................AAGGGTCAGTGGAGTCAGTGGTC.................................................................................23200.20400000011011000000
.........................................................................TGGAGTCAGTGGTCGGTATAGGTGTC.....................................................................2650.20100000000000010000
..........................................................................................ATAGGTGGTC----CC--AGGACGAGCGTTGT..............................................2650.20100000000000010000
..................................................................................TGGTCGGTATAGGTGGTC----CC--AGA.........................................................2350.20100000000000001000
.................................................................AGGGTCAGTGGAGTCAGTGGTC.................................................................................22200.20400000000004000000
..................................................................................TGGTCGGTATAGGTGGTC----CC--AGGAG.......................................................2550.20101000000000000000
...........................................................................................................................................TACACCCTAACCCCATAACATCCTA....2550.20100000000000010000
.............................................................................GTCAGTGGTCGGTATAGGTG.......................................................................2050.20100000000001000000
..........................................................C--CATAAGGGTCAGTGGAGTCA.......................................................................................21100.20200000000100001000
...........................................................................................................................................TACACCCTAACCCCATAACATCCTAAA..2750.20100000000000010000
....................................................................................GTCGGTATAGGTGGTC----CC--AGG.........................................................2150.20100000001000000000
................................................................................AGTGGTCGGTATAGGTGA......................................................................1850.20100000000001000000
...............................................................................CAGTGGTCGGTATAGGTGGTC----................................................................2150.20100000010000000000
.........................................GCAAGAACCCGACGT................................................................................................................15100.20200000000002000000
..................................................................................TGGTCGGTATAGGTGGTC----CC--AG..........................................................2250.20100000000000001000
.....................................................................................TCGGTATAGGTGGTC----CC--AGGAT.......................................................2250.20100000000000001000
..................................................................................TGGTCGGTATAGGTGGTC----CC--AGG.........................................................2350.20100000000001000000
.........................................................................TGGAGTCAGTGGTCGGTATAGGTGAAA----................................................................2750.20100000000000010000
..........................................................................GGAGTCAGTGGTCGGTATAGGTGA......................................................................2450.20100000000000010000
............................................................................AGTCAGTGGTCGGTATAGGTGG......................................................................2250.20100000000000001000
.......................................................................AGTGGAGTCAGTGGTCGGTATAGGT........................................................................2550.20100000000001000000
..............................................................................TCAGTGGTCGGTATAGGTGGTC----CC--A...........................................................2550.20100000010000000000
......................................................................CAGTGGAGTCAGTGGTCGGTATAGGT........................................................................2650.20100000000001000000
..............................................................ATAAGGGTCAGTGGAGTCA.......................................................................................19100.20200000000002000000
.................................................................................GTGGTCGGTATAGGTGGTC----CA--............................................................2150.20100000010000000000
..............................................................................TCAGTGGTCGGTATAGGTG.......................................................................1950.20100000000000001000
.................................................................................GTGGTCGGTATAGGTGGTC----C...............................................................2050.20100000010000000000
...........................................................................................................................................TACACCCTAACCCCATAACATCCTATT..2750.20100000000000010000
..................................................................................TGGTCGGTATAGGTGGTC----CC--AGGAT.......................................................2550.20100000000000010000
.................................................................................GTGGTCGGTATAGGTGGTC----................................................................1950.20100000000000001000
................................................................................AGTGGTCGGTATAGGTGGTC----................................................................2050.20100000000001000000
...........................................................................GAGTCAGTGGTCGGTATAGGT........................................................................2150.20100000000000010000
................................................................................AGTGGTCGGTATAGGTGGT.....................................................................1950.20100000000001000000
...............................................................................CAGTGGTCGGTATAGGTGG......................................................................1950.20100000000000001000
.....................................................................TCAGTGGAGTCAGTGGTCGGTATAGG.........................................................................2650.20100000000001000000
...........................................................................................TAGGTGGTC----CC--AGGA........................................................1560.17100000010000000000
.............................................................................GTCAGTGGTCGGTATAGG.........................................................................1860.17100000000001000000
.......................................................................AGTGGAGTCAGTGGTCGGTATAGG.........................................................................2460.17100000000000010000
.................................................................................GTGGTCGGTATAGGTGGTC----AT--............................................................2160.17100000000000001000
..........................................................................GGAGTCAGTGGTCGGTATAGG.........................................................................2160.17100000000000001000
........................................................................GTGGAGTCAGTGGTCGGTATA...........................................................................2160.17100000000000001000
......................................................................CAGTGGAGTCAGTGGTCGGTATAGG.........................................................................2560.17100000000000010000
.........................................................................TGGAGTCAGTGGTCGGTATAGGTA.......................................................................2460.17100000000000010000
........................................................................GTGGAGTCAGTGGTCGGTATAGG.........................................................................2360.17100000000000010000
.......................................................................AGTGGAGTCAGTGGTCGGTATA...........................................................................2260.17100000000000010000
..........................................................................GGAGTCAGTGGTCGGTAT............................................................................1860.17100000000000001000
.............................................................................GTCAGTGGTCGGTATAGT.........................................................................1860.17100000000001000000
.................................................................................................GTC----CC--AGGACGAGCGTTGCCT............................................21200.15300000000210000000
..................................................................................................TC----CC--AGGACGAGCGTTGCCTC...........................................21200.15300000030000000000
................................................................AAGGGTCAGTGGAGTCAGTGGTCG................................................................................24200.15300000000003000000
....................................................................GTCAGTGGAGTCAGTGGTCGGTA.............................................................................23200.15300000000011001000
............................................................................................AGGTGGTC----CC--AGGACGAGCGTT................................................22200.15300000000000012000
.................................AAGCTAAGGCAAGAACCCGACGAT...............................................................................................................2470.14100000000000010000
...................................GCTAAGGCAAGAACCCGACGTG...............................................................................................................2270.14100000000001000000
...................................GCTAAGGCAAGAACCCGACG.................................................................................................................2070.14100000000001000000
.................................AAGCTAAGGCAAGAACCCGACGAC...............................................................................................................2470.14100000000000010000
..............................................................ATAAGGGTCAGTGGAGTCAGTGGT..................................................................................2470.14100000000001000000
....................................CTAAGGCAAGAACCCGACGTG...............................................................................................................2170.14100100000000000000
..............................................................ATAAGGGTCAGTGGAGTCAGT.....................................................................................2170.14100000000000001000
.................................AAGCTAAGGCAAGAACCCGACGTC...............................................................................................................2470.14100000000001000000
..............................................................ATAAGGGTCAGTGGAGTCAGTGG...................................................................................2370.14100000000001000000
..........................................................C--CATAAGGGTCAGTGGAGTCAGTGGT..................................................................................2670.14100010000000000000
....................................CTAAGGCAAGAACCCGACG.................................................................................................................1970.14100000000100000000
..................................AGCTAAGGCAAGAACCCGACGTC...............................................................................................................2370.14100000000001000000
.................................AAGCTAAGGCAAGAACCCGA...................................................................................................................2080.13100000001000000000
.................................AAGCTAAGGCAAGAACC......................................................................................................................1780.13100000000001000000
..................................AGCTAAGGCAAGAACCCGAC..................................................................................................................2080.13100000000001000000
..................................AGCTAAGGCAAGAAC.......................................................................................................................1580.13100000000001000000
..................................AGCTAAGGCAAGAACCCGA...................................................................................................................1980.13100000000001000000
.................................AAGCTAAGGCAAGAACCC.....................................................................................................................1880.13100000000001000000
.....................................TAAGGCAAGAACCCGAC..................................................................................................................1790.11100000000001000000
.................................AAGCTAAGGCAAGAACCCGACTGT...............................................................................................................2490.11100000000000010000
.................................................................................GTGGTCGGTATAGGTGGTT----................................................................19200.10200000000000002000
..........................................................C--CATAAGGGTCAGTGGAGTC........................................................................................20100.10100000000000001000
.................................................................AGGGTCAGTGGAGTCAGTGGT..................................................................................21200.10200000000001001000
................................................................AAGGGTCAGTGGAGTCAGTGGTCGGT..............................................................................26200.10200000000000002000
................................................................AAGGGTCAGTGGAGTCAGT.....................................................................................19200.10200000001001000000
.....................................................................TCAGTGGAGTCAGTGG...................................................................................16200.10200000000002000000
.......................................AGGCAAGAACCCGACGT................................................................................................................17100.10100000000001000000
................................................................AAGGGTCAGTGGAGTCAGTGGTCT................................................................................24200.10200000000002000000
......................................AAGGCAAGAACCCGACGT................................................................................................................18100.10100000000001000000
dm3
GAGTG----GA------------GG------------------AAGGACCTGGCGTGTCAGGTCAAGGGTCAGTGGAGTCAGTGGTCGGCAAAGGTGGTC----CC--AGGCCGAGCGTTG---------------------ACCCTG-CCCCATAACATCCTGATCCSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................TCAGTGGTCGGCAAAGGTGGTC----C...............................................................232010.9521900000000100000000000000100000000000000004010000000000000000000000000000000000000000006000000000000000000000000000200000000000000000000011000100000000010000000000000000000000000000000000000041006015017000030300002000020111010221000000000000000000000000000000000000000000000000000000000000000000080600000012228000000000000002238022000000
..............................................................................TCAGTGGTCGGCAAAGGTGGTC----................................................................22209.5019000000000000000000000000000000000000010000010000000000000000000000000000000000000000100400000000000000000000000000000000000000000000000000006000000011100000000000000000000000000000000000000100000000260000003010618000201003050471000000000210000000000000000000000000000000000010000000000000000003482200000080000000000000000240410000000
..............................................................................TCAGTGGTCGGCAAAGGTGGTC----CC--............................................................24208.40168000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000010010000011000000000000000000000000000000000000001100000101000000010000300000060000000000000000010000000000000000000000000000000000000000000000000010000030020000000123000000000000009314531001000
..............................................................................TCAGTGGTCGGCAAAGGTGGTC----CC--A...........................................................25207.55151000000000000000000000000000000000000001030001050000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003010000000000000000000000000000000000000000000010000201500002000205200001017100000000000000000000000000000000000000000000000000000000000000000000000106030000005100000000000000001216450000000
...........................................................................................AAGGTGGTC----CC--AGGCCGAGCGTTG---------------------A.........................2517.0070000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000007000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................TCAGTGGAGTCAGTGGTCGGCAAAGG.........................................................................26105.80580000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000100000000000000001001000100000000000000000000000000000000000000000000000000000000000000001000000000000030203041000000000000000000000000000000000000000000000000000000000000000001414000000367000000000000000733000000
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..........................................................................................AAAGGTGGTC----CC--AGGCCGAG....................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................AGTGGTCGGCAAAGGTGGTC----CA--............................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000
.............................................................................................GGTGGTC----CC--AGGCCGAGCGT.................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000
....................................................................GTCAGTGGAGTCAGTGGTCGGCAAAT..........................................................................26100.1010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
..............................................................................TCAGTGGTCGGCAAAGGTGGTC----CC--C...........................................................25200.1020000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................GTGGAGTCAGTGGTCGGCAAAG..........................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000001000000
............................................................................AGTCAGTGGTCGGCAAAGGTGGTC----CC--A...........................................................27200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000001000000
........................................................................GTGGAGTCAGTGGTCGGCAA............................................................................20200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000
..........................................................................GGAGTCAGTGGTCGGCAAAG..........................................................................20200.1020000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
...................................................................GGTCAGTGGAGTCAGTGGTCGT...............................................................................22200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................CAGTGGAGTCAGTGGTCGGCAAAGGTG.......................................................................27200.1020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droTak1
GCGAG---AGAAGGACGAGCTAC--------------CGGCAGGGT------------A--AGCGCGGATCAAGAG--------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
GCTCA---GGG------------AG----------------------ACCTTGC------------------GTGGAGTCAGCGAT----AAAGGTGGCTGGACGAAGAGGTCGAACCTAGTTCTACC-TGCTAGGCGATACACCTTGCCGACACAAT----------SizeHit CountTotal NormTotal
No Reads
droFic1
ATGGCT--------------------------CCAGCAAAGCCAATAA---GATACGAC--CAAATTGGTCACTGGGTTCAGTGG-----------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droAna3
TCGACTCAGGA------------GG-----------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
No Reads

Generated: 05/17/2015 at 10:24 PM