ID:

der_453

 Coordinate:

scaffold_4690:15501363-15501513 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dere\GG19604-cds]; exon [dere_GLEANR_4334:3]; intron [Dere\GG19604-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CTGAAAAAATATAGAAAATACATTCCAAGGCCAAACCAGATGGCAAAGTTAAATGAAATTTAGAGCGTATAAAAATCGAAAGTCCCTAAATAGGATTTAGAGCTAATGATTATGAGCCTTAATAACATACAATTATATAGTAGAGAAAGATATTATACGGATACATTGAAAGCGACTAAAACTGTCGATAATCCCCTCCAGAAACCCGTGGTGCAGGCCATGGGCATCCTGAAGAAGGCCGCCGCCGAGGT
**************************************************..(((..(((.((.((.((((...((((..(((..((((((...)))))).)))..)))))))).)))).)))..))).......(((((((........))))))).(((...........((((.......)))).........)))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M055
female body
 M057
embryo
 V040
embryo
 V107
male body		 V108
head
.................................................................................................................................................................................................................................ATCCTGAAGAAGGCCGCCGCC..... 21 0 1 2.00 2 0 1 0 1 0
.................................................................................................................................................................................................................................ATCCTGAAGACCGCCGCCGCC..... 21 2 1 1.00 1 0 0 1 0 0
.................................................................................................................................................................................................................................ATCCTGAAGAAGGCCGCCGCCGAGGC 26 1 1 1.00 1 0 1 0 0 0
........................................................................................................................................................................................................................................AGAAGGCCGCCGCCGAGGT 19 0 1 1.00 1 1 0 0 0 0
................................................................................................................................................................................................................TGGTGCAGGCCATGGGCATCCT..................... 22 0 1 1.00 1 1 0 0 0 0
..................................................................................................................................................................................................................................TCCTGAAGAAGGCCGCCGCCGAGG. 24 0 1 1.00 1 1 0 0 0 0
.................................................................................................................................................................................................................................ATCCTGAAGAAGGCCGCCGCCGAGGT 26 0 1 1.00 1 1 0 0 0 0
....................................................................................................................................................................................................TGCCCAAACCCGTGGTGCAGGCCATGGG........................... 28 3 1 1.00 1 1 0 0 0 0
..........................................................................................................................................................................................................................CATGGGCATCCTGAAGAA............... 18 0 1 1.00 1 1 0 0 0 0
........................................................................................................................................................................................................CAAACCCGTGGTGCAGGC................................. 18 1 2 0.50 1 0 0 0 0 1

Anti-sense strand reads

GACTTTTTTATATCTTTTATGTAAGGTTCCGGTTTGGTCTACCGTTTCAATTTACTTTAAATCTCGCATATTTTTAGCTTTCAGGGATTTATCCTAAATCTCGATTACTAATACTCGGAATTATTGTATGTTAATATATCATCTCTTTCTATAATATGCCTATGTAACTTTCGCTGATTTTGACAGCTATTAGGGGAGGTCTTTGGGCACCACGTCCGGTACCCGTAGGACTTCTTCCGGCGGCGGCTCCA
**************************************************..(((..(((.((.((.((((...((((..(((..((((((...)))))).)))..)))))))).)))).)))..))).......(((((((........))))))).(((...........((((.......)))).........)))..************************************************** 		Read size # Mismatch Hit Count Total Norm Total M055
female body
.........................GTTCCGGTTTGGTCTACCGT.............................................................................................................................................................................................................. 20 0 1 1.00 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4690:15501313-15501563 + der_453 CTGAAAA-------------------AATATAGAAAATACATT------------CCAAGGCCAAACCAGATGGCA------------AAGTTAAATGAAATTT--AGAG--CGTATAAAAATCGAAAG-------------------TCCCTAAATAGGATTTA-GAGCTAATGATTATGAGCCTTAATAACATACAATTATATA--GTAGAGAAAG----------------------------------AT---ATTATACGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACATTG----------------AAAGCG--ACTAAAACTGTCGATAATC---CCCTCCAGAAACCCGTGGTGCAGGCCATGGGCATCCTGAAGAAGGCCGCCGCCGAGGT
droYak3 X:2537773-2537922 + CTGCATA-------------------AATTGAGA--------------ATGATTTGCAAGGCCTAAGCAAATTGCA------------GTGTTAAAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAAAACTATGCATAAA----T--ACTGAAACTCTCGTTGATC---CCCGCCAGAAACCCGTGGTGCAGGCCATGGGCATCCTGAAGAAGGCCGCCGCCGAGGT
droSec2 scaffold_4:230191-230375 - CAGAACA-------------------AATAGTGA--------------ATG-----------------------CTAGTTCTATTAGTTTGTTCAATGTAATTC--AGAG--TC-----------------TAAAAAATGTATTTACTTCATTAAC--------------------------------ATAACATTCAAG----------------------------TAAA----CG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTT----------------AAAGCA--GCTAAAACTCTCGTTAATC---CCCGCCAGAAACCCGTGGTGCAGGCCATGGGCATCCTGAAGAAGGCCGCCGCCGAGGT
droSim2 x:6177313-6177496 + CAGAACC-------------------AATAGTGA--------------ATG-----------------------CTAGTTCTATGAGTTTGTTCAATGTAATTC--AGAG--TC-----------------TAAAAAATGTATTTACTTCATTAAC--------------------------------AAAATA-----------------------------AGAAGAAAA----CA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTG----------------AAAGCA--GCTAAAACTCTCGTTAATC---CCCGCCAGAAACCCGTGGTGCAGGCCATGGGCATCCTGAAGAAGGCAGCCGCCGAGGT
dm3 chrX:6574151-6574380 + CAGAACA-------------------AATGGTGA--------------ATG-----------------------CTAGTTCAATGAGTTTGTTCATTGTAATTC--AGAG--TCTATAGAAAGTTAAAGTCTAAAAAATGTATTAACTACATTAAC--------------------------------ATAACACACAAGTATGTTGCGTAAAGTAAAAAATAAGAAGAAAA----CA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTG----------------AAAGCA--ACTAAAACTCTCGTTAATC---CCCGCCAGAAACCCGTGGTCCAGGCCATGGGCATCCTGAAGAAGGCCGCCGCCGAGGT
droEug1 scf7180000409522:245566-245790 + TAGAGA------------------------------------------ATT-----------------------CTTGTTTAATGAGTTTCTTCAAGG--------------TT-----------------TCAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCAGCAATGTAATGTAATTGAAGTGAAAAATGTTGA-AAAAGCTTGA--------------CTGGCAGAAAATATTAAAGTGGACCCAAGTAA---AATTTCCAAGTCA-----------------TAACAGTTT---------------------------AATTATTTCTTAAATTATT--TCAAA---TCCTATAGAAACCAGTGGTGCAGGCAATGGGCATCCTGAAAAAGGCCGCCGCTGAGGT
droBia1 scf7180000301760:2824874-2825106 - GAGAACA-------------------G----AGAAAACACATTTGTACA-C-----------------------CTAGTTTAATGCGCT-------------TCTCAGGG--TT-----------------TAAAAATAGCTTTTAGGTCATTAGCTAC-----------------------------AAAATAC---------------------------------TTTAGGAATGCGTCCTAGTTAGAGGATCGATCATGCTGATTCCTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAATAGTTTT--------------------------------------CATTT----------------GACTGG--ACTAATGATCCCACCCCTC---CTCCCCAGAAACCCGTGGTGCAGGCCATGGGCATCCTGAAGAAGGCCGCCGCCGAGGT
droTak1 scf7180000413955:27654-28007 + GAAAAAA------------------------------CACTTTACTACATT-----------------------CTCATTTAATATGTTTGTTCAAGG--------------TT-----------------TAAAAA--G--------------------------------------CT----------------------------------------------------------------------------------GC-AATTCCTTGTAATTTATGTAAAATTGTTTGAGCTTGAGAGCTTAAAAAGGAAAAAATATAGGACAAATAATTAATTTAAAAGCAATTCTAGAAAGAAATATGCCATAAGATATTAATTGAATTTAATATGTTTATTCAAAGCTTAAAAAAGCTGCAATTCATTGTAATTTATGTAAAATAGTTTAAAAAAAGCTTGAGAGAAAGAAATATGCTGTGAGATAA--------------------------------------------------------------------TAATG----------------AAACCA----------------CTTGA---AATTCCAGAAACCCGTCGTCCAGGCGATGGGCATCCTGAAGAAGGCCGCCGCCGAGGT
droEle1 scf7180000491044:466988-467044 + C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTAGAAACCCGTGGTGCAGGCCATGGGCATCCTGAAGAAGGCCGCCGCCGAGGT
droRho1 scf7180000776942:152132-152347 + ATCATAA-------------------AACACAAAATACCCTTTAAGAC------------------------GGCAAATTATT-----TTCTTAAC---A--AT--AGACAGTT-----------------TTAGAACCGTCTTATAATCCTTCAATACGACTTA-GAG-----------------------------------------------------------TTTATGAATATAACGAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATATCGTTTTCGA-TACACCTTCTCTG--------AT-----GCATCTT----------------CTTTG---TCTTATAGAAACCCGTGGTGCAGGCCATGGGAATCCTGAAGAAAGCCGCCGCCGAGGT
droFic1 scf7180000454072:841623-841839 - AAGGTGCCTTGAAATCTGATTGCAAAA-GTCGTAAAACTCTTGAAAAT------------------------GCGATATTTAAATAGCA-------------AATTAGAG--TA-----------------AGAGAATAACC-------------------------------------------TTAGGTGTTAATTATTTTAAA--ATGTTGCAAG----------------------------------GT---TCAAAAATG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCACTG--------CT---------GCA--ATAGAAATTCTTCACTCTG---ATTTTTAGAAACCCGTGGTGCAGGCCATGGGCATCCTGAAGAAGGCCGCCGCCGAGGT
droKik1 scf7180000302408:955610-955844 + CCGGATA---------------CCAGA--------------------------------------------------GTCGAAAAT-------------GATTC--CGAG--GGTCCAGTA--CACATT-------------------CCCCTGGATCGGATGTATGGACCAATGACCAT----------------------------------------------------------------------------------GC-GATCCCTGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGA---AGTTTCCCATTGGCGGAGTCGAAGAGCGCATGCCAGTATATATACATCCATAAAATTCTGTCTAGA-AATAT--------CCCTTAAGCCTGCATACTCCCAGCGACCCATTATAAAGGCCATGGGTATGGTAAAGAAGGCGGCTGCCGAGGC
droAna3 scaffold_13117:4330188-4330270 + GA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTA--TCTAATATGATCTCCAAT----CTCCACAGAAACCCGTGGTCCAGGCCATGGGCATCCTCAAGAAGGCCGCCGCCGAGGT
droBip1 scf7180000396383:76128-76185 - C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGTAGAAACCCGTGGTCCAGGCCATGGGTATCCTGAAGAAGGCCGCCGCCGAGGT
dp5 XL_group1a:380017-380093 + AC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAATTCTCTATACCA---CTTCACAGAAACCTGTGGTGCAGGCAATGGGCATCCTAAAGAAGGCCGCAGCCGAAGT
droPer2 scaffold_26:285374-285450 - AC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAATTCTCTATACCA---CTTCACAGAAACCTGTGGTGCAGGCAATGGGCATCCTAAAGAAGGCCGCAGCCGAAGT
droWil2 scf2_1100000004963:2479302-2479356 - T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGAAACCTGTTGTTCAGGCCATGGGCATATTGAAAAAGGCCGCTGCCGAGGT
droVir3 scaffold_12928:6057297-6057349 + C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAACCGGTTGTCCAGGCCATGGGCATCCTGAAGAAGGCCGCCGCCGAGGT
droMoj3 scaffold_6680:18931377-18931440 - GATGAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCCCAGAAGTCCATTATACAGGCCATGGGCATAGTGAAGAAGGCCGCCGCTGAGGT
droGri2 scaffold_14853:5030382-5030433 + ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAACCAGTCGTTCAGGCAATGGGCATTTTGAAGAAGGCCGCCGCCGAGGT

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
CTGAAAA-------------------AATATAGAAAATACATT------------CCAAGGCCAAACCAGATGGCA------------AAGTTAAATGAAATTT--AGAG--CGTATAAAAATCGAAAG-------------------TCCCTAAATAGGATTTA-GAGCTAATGATTATGAGCCTTAATAACATACAATTATATA--GTAGAGAAAG----------------------------------AT---ATTATACGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATACATTG----------------AAAGCG--ACTAAAACTGTCGATAATC---CCCTCCAGAAACCCGTGGTGCAGGCCATGGGCATCCTGAAGAAGGCCGCCGCCGAGGTSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGAAGAAGGCCGCCGCC.....2112.0020100100
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGAAGAAGGCCGCCGCCGAGGC2611.0010100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAGGCCGCCGCCGAGGT1911.0011000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGCAGGCCATGGGCATCCT.....................2211.0011000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCTGAAGAAGGCCGCCGCCGAGG.2411.0011000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGAAGAAGGCCGCCGCCGAGGT2611.0011000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGGCATCCTGAAGAA...............1811.0011000000
droYak3
CTGCATA-------------------AATTGAGA--------------ATGATTTGCAAGGCCTAAGCAAATTGCA------------GTGTTAAAAGT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATAAAACTATGCATAAA----T--ACTGAAACTCTCGTTGATC---CCCGCCAGAAACCCGTGGTGCAGGCCATGGGCATCCTGAAGAAGGCCGCCGCCGAGGTSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCCATGGGCATCCTGAA..................2011.00100000100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACCCGTGGTGCAGGCCA...............................1911.00101000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGGCCATGGGCATCCTGAAGAAGGC............2711.00101000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAGGCCGCCGCCGAGGT2111.00100100000000
droSec2
CAGAACA-------------------AATAGTGA--------------ATG-----------------------CTAGTTCTATTAGTTTGTTCAATGTAATTC--AGAG--TC-----------------TAAAAAATGTATTTACTTCATTAAC--------------------------------ATAACATTCAAG----------------------------TAAA----CG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTT----------------AAAGCA--GCTAAAACTCTCGTTAATC---CCCGCCAGAAACCCGTGGTGCAGGCCATGGGCATCCTGAAGAAGGCCGCCGCCGAGGTSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGAAGAAGGCCGCCGCCGAG..2411.0010010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGAAGAAGGCCGCCGCC.....2111.0010010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGAAGAAGGCCGCCGCCGAGG.2511.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAGGCCGCCGCCGAGGT2111.0010010
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGGCCATGGGCATCCTGAAG.................2311.0010001
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTCTCGTTAATC---CCCGCCAG..................................................2111.0010001
droSim2
CAGAACC-------------------AATAGTGA--------------ATG-----------------------CTAGTTCTATGAGTTTGTTCAATGTAATTC--AGAG--TC-----------------TAAAAAATGTATTTACTTCATTAAC--------------------------------AAAATA-----------------------------AGAAGAAAA----CA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTG----------------AAAGCA--GCTAAAACTCTCGTTAATC---CCCGCCAGAAACCCGTGGTGCAGGCCATGGGCATCCTGAAGAAGGCAGCCGCCGAGGTSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGGCCATGGGCATCCTG....................2011.00100000000001000000
dm3
CAGAACA-------------------AATGGTGA--------------ATG-----------------------CTAGTTCAATGAGTTTGTTCATTGTAATTC--AGAG--TCTATAGAAAGTTAAAGTCTAAAAAATGTATTAACTACATTAAC--------------------------------ATAACACACAAGTATGTTGCGTAAAGTAAAAAATAAGAAGAAAA----CA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CATTG----------------AAAGCA--ACTAAAACTCTCGTTAATC---CCCGCCAGAAACCCGTGGTCCAGGCCATGGGCATCCTGAAGAAGGCCGCCGCCGAGGTSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGAAGAAGGCCGCCGCC.....2116.0060000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000050000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCATGGGCATCCTGAAGAA...............2114.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGGCCGCCGCCGAGGT1814.0040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000012000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCATGGGCATCCTGAAGA................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCATGGGCATCCTGAAGA................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCATGGGCATCCTGAA..................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGAAGAAGGCCGCCGCCGAGGT2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TG----------------AAAGCA--ACTAAAACTCT.....................................................................1912.0020000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCATGGGCATCCTGAAGAAGGCCG..........2712.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGCATCCTGAAGAAG..............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCCATGGGCATCCTGAAG.................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCCATGGGCATCCTGAA..................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGCATCCTGAAGAAGGCCGCCG.......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCTGAAGAAGGCCGCCGCCGAGGT2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGCATCCTGAAGAAGGCCGCCGC......2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................AAGTATGTTGCGTAAAGTAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGAAGAAGGCCGCCGCCGAG..2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGAAGGCCGCCGCCGAGGT2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGCATCCTGAAGAAGGCCGCCGCCGA...2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCCTGAAGAAGGCCGC.........1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGCATCCTGAAGAAGG.............1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCA--ACTAAAACTCTCGTTAATC---CC........................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATGGGCATCCTGAAGAAGGCCG..........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGAAGAAGGCCGCCGCCGA...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCCATGGGCATCCTGAAGA................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCCTGAAGAAGGCCGCC........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
...................................................................................................................................................................................................................AAGTAAAAAATAAGAAGAAAA----CA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAT..........................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGGCATCCTGAAGAAGGCCGC.........2411.0010000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCTGAAGAAGGCCGCCGCCGAGG.2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCATGGGCATCCTGAAG.................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATGGGCATCCTGAAGAA...............2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGGCATCCTGAAGAAGGCCGCCGC......2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGAAGAAGGCCGCCGC......2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGGGCATCCTGAAGAAGGCCG..........2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCATGGGCATCCTGAAG.................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCATCCTGAAGAAGGC............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCCTGAAGAAGGCCGCCGCC.....2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................AAAAAATAAGAAGAAAA----G...........................................................................................................................................................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000
droEug1
TAGAGA------------------------------------------ATT-----------------------CTTGTTTAATGAGTTTCTTCAAGG--------------TT-----------------TCAAAA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATCAGCAATGTAATGTAATTGAAGTGAAAAATGTTGA-AAAAGCTTGA--------------CTGGCAGAAAATATTAAAGTGGACCCAAGTAA---AATTTCCAAGTCA-----------------TAACAGTTT---------------------------AATTATTTCTTAAATTATT--TCAAA---TCCTATAGAAACCAGTGGTGCAGGCAATGGGCATCCTGAAAAAGGCCGCCGCTGAGGTSizeHit CountTotal NormTotal
No Reads
droBia1
GAGAACA-------------------G----AGAAAACACATTTGTACA-C-----------------------CTAGTTTAATGCGCT-------------TCTCAGGG--TT-----------------TAAAAATAGCTTTTAGGTCATTAGCTAC-----------------------------AAAATAC---------------------------------TTTAGGAATGCGTCCTAGTTAGAGGATCGATCATGCTGATTCCTTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAAAATAGTTTT--------------------------------------CATTT----------------GACTGG--ACTAATGATCCCACCCCTC---CTCCCCAGAAACCCGTGGTGCAGGCCATGGGCATCCTGAAGAAGGCCGCCGCCGAGGTSizeHit CountTotal NormTotal
No Reads
droTak1
GAAAAAA------------------------------CACTTTACTACATT-----------------------CTCATTTAATATGTTTGTTCAAGG--------------TT-----------------TAAAAA--G--------------------------------------CT----------------------------------------------------------------------------------GC-AATTCCTTGTAATTTATGTAAAATTGTTTGAGCTTGAGAGCTTAAAAAGGAAAAAATATAGGACAAATAATTAATTTAAAAGCAATTCTAGAAAGAAATATGCCATAAGATATTAATTGAATTTAATATGTTTATTCAAAGCTTAAAAAAGCTGCAATTCATTGTAATTTATGTAAAATAGTTTAAAAAAAGCTTGAGAGAAAGAAATATGCTGTGAGATAA--------------------------------------------------------------------TAATG----------------AAACCA----------------CTTGA---AATTCCAGAAACCCGTCGTCCAGGCGATGGGCATCCTGAAGAAGGCCGCCGCCGAGGTSizeHit CountTotal NormTotal
No Reads
droEle1
C-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTAGAAACCCGTGGTGCAGGCCATGGGCATCCTGAAGAAGGCCGCCGCCGAGGTSizeHit CountTotal NormTotal
No Reads
droRho1
ATCATAA-------------------AACACAAAATACCCTTTAAGAC------------------------GGCAAATTATT-----TTCTTAAC---A--AT--AGACAGTT-----------------TTAGAACCGTCTTATAATCCTTCAATACGACTTA-GAG-----------------------------------------------------------TTTATGAATATAACGAAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGGATATCGTTTTCGA-TACACCTTCTCTG--------AT-----GCATCTT----------------CTTTG---TCTTATAGAAACCCGTGGTGCAGGCCATGGGAATCCTGAAGAAAGCCGCCGCCGAGGTSizeHit CountTotal NormTotal
No Reads
droFic1
AAGGTGCCTTGAAATCTGATTGCAAAA-GTCGTAAAACTCTTGAAAAT------------------------GCGATATTTAAATAGCA-------------AATTAGAG--TA-----------------AGAGAATAACC-------------------------------------------TTAGGTGTTAATTATTTTAAA--ATGTTGCAAG----------------------------------GT---TCAAAAATG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTCACTG--------CT---------GCA--ATAGAAATTCTTCACTCTG---ATTTTTAGAAACCCGTGGTGCAGGCCATGGGCATCCTGAAGAAGGCCGCCGCCGAGGTSizeHit CountTotal NormTotal
No Reads
droKik1
CCGGATA---------------CCAGA--------------------------------------------------GTCGAAAAT-------------GATTC--CGAG--GGTCCAGTA--CACATT-------------------CCCCTGGATCGGATGTATGGACCAATGACCAT----------------------------------------------------------------------------------GC-GATCCCTGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGA---AGTTTCCCATTGGCGGAGTCGAAGAGCGCATGCCAGTATATATACATCCATAAAATTCTGTCTAGA-AATAT--------CCCTTAAGCCTGCATACTCCCAGCGACCCATTATAAAGGCCATGGGTATGGTAAAGAAGGCGGCTGCCGAGGCSizeHit CountTotal NormTotal
No Reads
droAna3
GA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AATTA--TCTAATATGATCTCCAAT----CTCCACAGAAACCCGTGGTCCAGGCCATGGGCATCCTCAAGAAGGCCGCCGCCGAGGTSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGCATCCTCAAGAAGGCC...........2111.001010000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACCCGTGGTCCAGGCCATGGGC..........................2511.001000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGAAGGCCGCCGCCGAGG.2111.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGGCCATGGGCATCCTCAAGAAGGC............2711.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTCAAGAAGGCCGCCGCCG....2211.001000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCTCAAGAAGGCCGCCGCCGAGGT2711.001010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCCTCAAGAAGGCCGCCGTT.....2311.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGTGGTCCAGGCCATGGGCATCCTCA...................2611.001000001
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAGGCCATGGGCATCCTCAAGAA...............2611.001100000
droBip1
C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTGTAGAAACCCGTGGTCCAGGCCATGGGTATCCTGAAGAAGGCCGCCGCCGAGGTSizeHit CountTotal NormTotal
No Reads
dp5
AC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAATTCTCTATACCA---CTTCACAGAAACCTGTGGTGCAGGCAATGGGCATCCTAAAGAAGGCCGCAGCCGAAGTSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACCTGTGGTGCAGGCAATGGGCA.........................2512.0020101000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTGCAGGCAATGGGCATC.......................2011.0010000010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGTGGTGCAGGCAATGG............................2011.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGGTGCAGGCAATGGGCATC.......................2311.0010000010000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGCAGGCAATGGGCATCCT.....................2311.0010001000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTAAAGAAGGCCGCAGCCGAAC.2511.0010010000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGGTGCAGGCAATGGGCA.........................2111.0010000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACCTGTGGTGCAGGCAATGGGCATCC......................2811.0010000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTGCAGGCAATGGGCA.........................2011.0010000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTAAAGAAGGCCGCAGCCG....2211.0010100000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGTGGTGCAGGCAATGGGCATCCT.....................2611.0010000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGCATCCTAAAGAAGGCC...........1911.0010100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGGTGCAGGCAATGGGC..........................2011.0010000010000
droPer2
AC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAATTCTCTATACCA---CTTCACAGAAACCTGTGGTGCAGGCAATGGGCATCCTAAAGAAGGCCGCAGCCGAAGTSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGTGGTGCAGGCAATGGGC..........................2111.001010000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGCATCCTAAAGAAGGCC...........2111.001010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTAAAGAAGGCCGCAGCC.....2111.001001000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTGCAGGCAATGGGCAT........................2011.001000001
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGTGCAGGCAATGGGCATCC......................2311.001010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGCAGGCAATGGGCATCCT.....................2011.001000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTGGTGCAGGCAATGGGCA.........................2111.001001000
droWil2
T---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCAGAAACCTGTTGTTCAGGCCATGGGCATATTGAAAAAGGCCGCTGCCGAGGTSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGAAAAAGGCCGCTGC......1912.00202000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGTTGTTCAGGCCATGGGC..........................2011.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTCAGGCCATGGGC..........................1811.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGAAAAAGGCCGCT........1811.00100010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAAAAAGGCCGCTGCCGAGGT2311.00101000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTCAGGCCATGGGCATA.......................2111.00100100
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTTCAGGCCATGGGCATA.......................2211.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGAAAAAGGCCGCTGCCGAGGT2611.00100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGTTCAGGCCATGGGC..........................1911.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATTGAAAAAGGCCGCTGCC.....2111.00100010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTCAGGCCATGGGCGG........................1860.17101000
droVir3
C-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAACCGGTTGTCCAGGCCATGGGCATCCTGAAGAAGGCCGCCGCCGAGGTSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGAAGAAGGCCGCCGC......2012.002000000000000000001000000000001000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAACCGGTTGTCCAGGCCATG.............................2111.001001000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCCATGGGCATCCTGAAGAAGGCCGC.........2911.001000000000000000000000010000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGGGCATCCTGAAGAAGGCCGCCGC......2611.001000000000000000010000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACCGGTTGTCCAGGCCATGG............................2311.001000100000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCCAGGCCATGGGCATCC......................2011.001000000000000000010000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAGGCCGCCGCCGAGGG2111.001000000000000000000100000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAACCGGTTGTCCAGGCCATGGGC..........................2511.001000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAAGAAGGCCGCCGCCGAG..2011.001000000000000000000100000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGCCATGGGCATCCTGAA..................2011.001000000000000000000100000000000000000000000000000000000000000000
droMoj3
GATGAT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTTCCCAGAAGTCCATTATACAGGCCATGGGCATAGTGAAGAAGGCCGCCGCTGAGGTSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
No Reads
droGri2
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAAACCAGTCGTTCAGGCAATGGGCATTTTGAAGAAGGCCGCCGCCGAGGTSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAAGGCCGCCGCCGAG..1911.00110

Generated: 05/17/2015 at 10:21 PM