ID:

der_438

 Coordinate:

scaffold_4690:13568155-13568305 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

CDS [Dere\GG17782-cds]; exon [dere_GLEANR_2680:2]; intron [Dere\GG17782-in]

No Repeatable elements found

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
AAATTAACAAATATATACCTATACATATCTACCCCTAGAGTTAAGGAGCAATTAATGCGTAATTGTATTTTTCAGTTTAAACAGTATTATAATTTGTTAGATATTCCCAGTAAGTGACTTGTTCATTATGAATCCAATTAGAGGCTTATACACATCTTTTATGACTAAAATCCAACTTATCCCCTCTCTTGACGCTTCCAGGCGAGCATCTGACTGGCGAGTTCCGGGACAATGTGAACCGGTTCCGCAAG
**************************************************......(((((((((.......)))))..................((((..((((...))))..))))..(((((...)))))......(((((............(((((....)))))............)))))....))))......************************************************** 		Read size # Mismatch Hit Count Total Norm Total V107
male body		 M055
female body
 V108
head
 GSM1528801
follicle cells		 M057
embryo
 V040
embryo
...............................................................................................................................................................................................................ATCTGACTGGCGAGTTCCGGGA...................... 22 0 1 8.00 8 6 1 1 0 0 0
............................................................................................................................................................................................................AGCATCTGACTGGCGAGTTCCGGGA...................... 25 0 1 7.00 7 0 0 0 7 0 0
...............................................................................................................................................................................................................ATCTGACTGGCGAGTTCCGG........................ 20 0 1 5.00 5 5 0 0 0 0 0
...............................................................................................................................................................................................................ATCTGACTGGCGAGTTCCGGGAC..................... 23 0 1 5.00 5 3 1 0 0 1 0
...............................................................................................................................................................................................................ATCTGACTGGCGAGTTCCGGGACAAT.................. 26 0 1 3.00 3 2 0 1 0 0 0
..............................................................................................................................................................................................................CATCTGACTGGCGAGTTCCGGGAC..................... 24 0 1 3.00 3 0 2 1 0 0 0
...............................................................................................................................................................................................................ATCTGACTGGCGAGTTCCGGG....................... 21 0 1 3.00 3 3 0 0 0 0 0
...............................................................................................................................................................................................................ATCTGACTGGCGAGTTCC.......................... 18 0 1 3.00 3 1 0 1 0 1 0
...............................................................................................................................................................................................................ATCTGACTGGCGAGTTCCGGGACAATGT................ 28 0 1 2.00 2 1 1 0 0 0 0
.....................................................................................................................................................................................................AAAGGCGAGCATCTGACTGGC................................. 21 2 1 2.00 2 0 0 2 0 0 0
.................................................................................................................................................................................................GCTCAAAGGCGAGCATCTGACTGGC................................. 25 3 1 2.00 2 0 2 0 0 0 0
....................................................................................................................................................................................................CAAAGGCGAGCATCTGACTGGCGAGTTC........................... 28 3 1 1.00 1 0 1 0 0 0 0
..............................................................................................................................................................................................................CATCTGACTGGCTAGTTCC.......................... 19 1 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................................CATCTGACTGGCGAGTTCCGGGA...................... 23 0 1 1.00 1 0 0 1 0 0 0
..............................................................................................................................................................................................................CATCTGACTGGCGAGTTCC.......................... 19 0 1 1.00 1 0 0 1 0 0 0
......................................................................................................................................................................................................................TGGCGAGTTCCGGGACAATGTGAAC............ 25 0 1 1.00 1 1 0 0 0 0 0
................................................................................................................................................................................................................TCTGACTGGCGAGTTCCGGG....................... 20 0 1 1.00 1 0 0 0 0 0 1
.............................................................................................................................................................................................................GCATATGACTGGCGAGTTCC.......................... 20 1 1 1.00 1 0 1 0 0 0 0
...................................................................................................................................................................................................TCAAAGGCGAGCATCTGACTGGC................................. 23 3 1 1.00 1 0 0 1 0 0 0
...............................................................................................................................................................................................................AGCTGACTGGCGAGTTCCGGGAC..................... 23 1 1 1.00 1 0 0 0 0 1 0
.............................................................................................................................................................................................................GCATCTGACTGGCGAGTTCCGGGAC..................... 25 0 1 1.00 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................GGCGAGTTCCGGGACAATGTG............... 21 0 1 1.00 1 0 1 0 0 0 0
...............................................................................................................................................................................................................ATCTGACTGGCTAGTTCCGGG....................... 21 1 1 1.00 1 0 0 1 0 0 0
.............................................................................................................................................................................................................GCATCTGACTGGCGAGTT............................ 18 0 1 1.00 1 0 1 0 0 0 0
.................................................................................................................................................................................................................CTGACTGGCGAGTTCCGGGA...................... 20 0 1 1.00 1 0 0 0 0 1 0
...............................................................................................................................................................................................................ATCTGACTGGCGAGTTCCG......................... 19 0 1 1.00 1 0 0 0 0 0 1
......................................................................................................................................................................................................................................AATGTGAACCTGTTCCGCA.. 19 1 1 1.00 1 0 0 1 0 0 0
......................................................................................................ATTCCCAGTAAGTGAGTCGTTAA.............................................................................................................................. 23 3 1 1.00 1 0 1 0 0 0 0
.....................................................................................................................................................................................................AAAGGCGAGCATCTGACTGGCGAGTTCC.......................... 28 2 1 1.00 1 0 1 0 0 0 0
.............................................................................................................................................................................................................GCATCTGACTGGCGAGTTCCGGG....................... 23 0 1 1.00 1 1 0 0 0 0 0
..............................................................................................................................................................................................................CATCTGACTGGCGAGTTCCGG........................ 21 0 1 1.00 1 1 0 0 0 0 0
......................................................................................................................................................................................................................................AATGTGAACCGGTTCCGC... 18 0 1 1.00 1 0 0 1 0 0 0
.....................................................................................................................................................................................................AAAGGCGAGCATCTGACTGGCGAGTTC........................... 27 2 1 1.00 1 1 0 0 0 0 0
...........................................................................................................................................................................................................GAGCATCTGACTGGCGAGTTCCGGGA...................... 26 0 1 1.00 1 0 1 0 0 0 0
.......................................................................................................................................................................................................................................ATGTGAACCGGTTCCGCA.. 18 0 1 1.00 1 0 0 1 0 0 0
.......................................................................................................................................................................................................AGGCGAGCATCTGACTGGC................................. 19 0 1 1.00 1 0 0 1 0 0 0
.....................................................................................................................................................................................................AAAGGCGAGCATCTGACTGG.................................. 20 2 2 0.50 1 0 1 0 0 0 0
....................................................................................................................................................................................................CAAAGGCGAGCATCTGACTGGC................................. 22 3 2 0.50 1 0 0 0 0 1 0
.....................................................................................................................CCTGTTCATGATGAATCCA................................................................................................................... 19 2 3 0.33 1 0 0 0 0 0 1
.....................................................................................................................................................................................................AAAGGCGAGCATCTGACT.................................... 18 2 8 0.25 2 1 0 1 0 0 0
..................................................................................................................................................................................................CTCAAAGGCGAGCATCTGACT.................................... 21 3 5 0.20 1 1 0 0 0 0 0
......................................................................................................ATTCCCAGTAAGTGAGTCAT................................................................................................................................. 20 3 7 0.14 1 0 1 0 0 0 0

Anti-sense strand reads

TTTAATTGTTTATATATGGATATGTATAGATGGGGATCTCAATTCCTCGTTAATTACGCATTAACATAAAAAGTCAAATTTGTCATAATATTAAACAATCTATAAGGGTCATTCACTGAACAAGTAATACTTAGGTTAATCTCCGAATATGTGTAGAAAATACTGATTTTAGGTTGAATAGGGGAGAGAACTGCGAAGGTCCGCTCGTAGACTGACCGCTCAAGGCCCTGTTACACTTGGCCAAGGCGTTC
**************************************************......(((((((((.......)))))..................((((..((((...))))..))))..(((((...)))))......(((((............(((((....)))))............)))))....))))......************************************************** 		Read size # Mismatch Hit Count Total Norm Total V040
embryo
....................................TCTCACTTCCTCGTAAATC.................................................................................................................................................................................................... 19 3 20 0.05 1 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4690:13568105-13568355 - der_438 AAATT----------AA--CAAATATATACCTATACATATCTAC-CCCT-AGAGTTAAGG-------------------------------------------------------------------------------------A--G-CA---------------------------------------------------------------ATTAATGCGTAATTGTATTTTTCAGTTTA-AACAGTATTATAATTTGTTAGATATTCCCAGTAAGTGACT----TGTTCATTATGAATCCAATTAGAG---------------------------------GCTTATACACATCTTTTATGACTAA--------------------AATC-------------------C--------A-A--CTTATCCCCTCTCTTG-----ACG-CTTCCAGGCGAGCATCTGACTGGCGAGTTCCGGGACAATGTGAACCGGTTCCGCAAG
droYak3 X:7581232-7581432 + ATAT------------------------ACATATATA----TA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTACTGTTCAGTT----------------------------CCACAATATGTGATTTTTTTGTTCATTATAAAGCCAATTAGGGGTTTTTAAAGCCGCTTATCTGGATAT---------------TCATTTTACAAGACTAT--------------------AACT-------------------C--------G-ATATCTAACCTTCTCCTGG-----GCG-ATTCCAGGCGAGCACCTGACTGGCGAGTTCCGGGACAATGTGAACCGGTTCCGCAAG
droSec2 scaffold_21:1054543-1054773 + AAATT----------AAAAAAAATATATA----TA----GATATTACTT-ATATTTAAGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTG-CTCGTTCAATTTATAATCGTATATTAATTTGCTAATTA-------TATGTGACT----TATTCACCATTAAGCTCATAAG-----------CAAGGTCATTTGGAAATTGTAGAAGTTAATAG-------------------------------------AATC-------------------C--------CTCTCTTTTTCCTTTCCCTTG-----ACT-ATTCCAGGCGAGCACCTGACTGGCGAGTTCCGGGACAATGTGAACCGGTTCCGCAAG
droSim2 x:12645508-12645746 + dsi_5881 TAATTT-AATAAATAAA--AAAATATATA----GA----GATATTACTT-ATATTTAAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCTCGTTCAATTTATAATCGTATATTAATTTGCTAATTA-------TATGTGACT----TATTCACCATTAAGCTCATAAG-----------CAAGGCCATCGGGAAATTGTAGAAGCTAATAG-------------------------------------AATC-------------------C--------CTCTCTTTTTCCTTTCCCTTG-----ACT-ATTCCAGGCGAGCACCTGACTGGCGAGTTCCGGGACAATGTGAACCGGTTCCGCAAG
dm3 chrX:13302135-13302370 + AAATT----------AA--AAAATATATA----TA----GATATTACCTAATATAAAAGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCTCTTTCAATTTATAATGGTATATTAATGTGCTAATTA-------TATGTGATT----GGTTCACTACTAAGCTTATAAA-----------CAAGGTCATCTGGAAATTGTTGAAGTTAATAG-------------------------------------AAAC-------------------C--------CTCTCCTTTTCCTTTCCCTTGATTTCCCG-ATTCCAGGCGAGCACCTGACTGGCGAGTTCCGGGACAATGTGAACCGGTTCCGCAAG
droEug1 scf7180000408958:304114-304371 - TAAGTT-AGTA----AA--AAAATATATA----A-----------------TAAAT---------------AACCTTTTGCAAGTATTTTTTAAAAATTAGTACACTATCTTATCATTAATATTCTTCCAA--AAAACTTTAATGA--G-TAATA---ACTCTGGTGTTGTTATTAGATTTAAGTATAGATTACTTTTTTTGTGGGTATATCATT--------------------------------------------------------------ATCTCACC----GGCTTA---------------------------------------------------------------------------------------------------------------------------------CCCCCATTCCCTTTCTCTTG-----CCC-ATTACAGGTGAGCACTTGACTGGCGAGTTCCGGGACAATGTCAACCGGTTCCGCAAG
droBia1 scf7180000302421:342223-342297 + CTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCTTTCTTC-T-----GCC-GTTCCAGGCGAGCACCTGACCGGCGAGTTCCGGGACAACGTGAACCGGTTCCGCAAG
droTak1 scf7180000415812:258566-258660 + TTTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGCAGT-------------------------------------------AATC-------------------T--------CACTTATCTCACTTTCTG--T-----TCT-GTTCCAGGCGAGCACTTGACCGGTGAGTTCCGGGACAATGTGAACCGGTTCCGCAAG
droEle1 scf7180000491006:238306-238382 - CCAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-------------------T--------TCCCCCTTTTCCT---------------T-CCTCCAGGCGAGCACTTGACTGGCGAGTTCCGGGACAATGTGAACCGGTTCCGCAAG
droRho1 scf7180000762169:226116-226344 + ATGATT---------AA---AGAGAAATA-------------ATTATTTGATAAAAAAAGTGATTCCAAATAA-----------------------------------TCTTATGACAAATA------CAACTAAAACTTTAAATA--GATAAAAAAAA-----GT-TTATTATTTGACCTAAGTAGGGAT--CTTTTTTTGTGGGTGTATCATT--------------------------------------------------------------ATCTCAC--------------------------------------------------------------------------------------------------------------C-------------------C--------GTTCCCTTTCCCTTTCTCTTG-----CCC-ACTCCAGGCGAGCACTTGACTGGCGAGTTTCGGGACAATGTGAACCGGTTCCGCAAG
droFic1 scf7180000453829:1647421-1647605 + TTTCCGCTTTAA----------------------------------------------------------------------------------------------------------------------------------ACGAAAC-TAATA---AGTTTTGTGATGTTATTAGATTTCAACATGGATTATATTTTTAATGGGCTTATTATT--------------------------------------------------------------ATCTCACC----GGATCACCT-----------------------------------------------------------------------------------------------TC-------------------CCACCT------TCTCACCCCTTTCTCTTG-----GCCAATTCCAGGTGAGCACTTGACTGGCGAGTTCCGGGACAATGTGAACCGGTTCCGCAAG
droKik1 scf7180000302698:69643-69721 + CTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCTTTTTTTTTACC---------CCT-TTTCCAGGCGAACACTTGACCGGTGAGTTCCGTGATAATGTTAACCGGTTCCGCAAG
droAna3 scaffold_13248:1270822-1270877 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCAGGCGAACACCTGACGGGAGAGTTCCGGGACAAGGTGAACCGGTTCCGTAAG
droBip1 scf7180000396571:338921-339047 - AATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAG---------------------------------ACTCA-AG-------------------------------------AG-ACAGGTTTTTAATCATATACCCCCCACCTGGCCCCCTAATTGAAACCATT-----CCC-ATTCCAGGCGAACACCTGACGGGAGAGTTCCGGGACAAGGTGAACCGGTTCCGTAAG
dp5 XL_group3a:475214-475287 - ACTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGCT--TCTTTT------------T-CCTGCAGGCGAGCACCTGACCGGAGAGTTTCGGGACAAAGTGAACCGGTTCCGCAAG
droWil2 scf2_1100000004909:6058536-6058616 - CTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCAATGTCTTTCTTT-------TTG-GTATTAGGTGAGCATTTAACTGGCGAATTCCGTGACAAGGTCAATCGTTTCCGTAAG
droVir3 scaffold_12970:8783050-8783105 + ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAGGTGAGCACTTAACGGGCGAGTTTCGAGACAAGGTCAATCGGTTTCGCAAG
droMoj3 scaffold_6473:16725711-16725763 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGTGAGCACTTAACGGGCGAGTTTCGGGACAAAGTCAATCGGTTCCGCAAG
droGri2 scaffold_15203:11504487-11504675 + AGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAATTT------TTTTTTTTTATTTTG-AACACGA-------------------CACAATAAAT-----------------------------GCACTGTTAATAATTGATTATTTGAATAT---------------TTTGTTTAAACATTTATTGATTGCAAGTAATCAATGCAATG-------------------C--------A-------TTTGTTTTTCATA-----ACT-TTTCCAGGTGAGCATTTGACGGGCGAGTTTCGAGACAATGTAAATCGCTTCCGCAAG

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
AAATT----------AA--CAAATATATACCTATACATATCTAC-CCCT-AGAGTTAAGG-------------------------------------------------------------------------------------A--G-CA---------------------------------------------------------------ATTAATGCGTAATTGTATTTTTCAGTTTA-AACAGTATTATAATTTGTTAGATATTCCCAGTAAGTGACT----TGTTCATTATGAATCCAATTAGAG---------------------------------GCTTATACACATCTTTTATGACTAA--------------------AATC-------------------C--------A-A--CTTATCCCCTCTCTTG-----ACG-CTTCCAGGCGAGCATCTGACTGGCGAGTTCCGGGACAATGTGAACCGGTTCCGCAAGSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGACTGGCGAGTTCCGGGA......................2218.0081000610
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCATCTGACTGGCGAGTTCCGGGA......................2517.0070000007
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGACTGGCGAGTTCCGG........................2015.0050000500
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGACTGGCGAGTTCCGGGAC.....................2315.0051100300
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGACTGGCGAGTTCCGGGACAAT..................2613.0030000210
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTGACTGGCGAGTTCCGGGAC.....................2413.0032000010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGACTGGCGAGTTCCGGG.......................2113.0030000300
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGACTGGCGAGTTCC..........................1813.0030100110
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGACTGGCGAGTTCCGGGACAATGT................2812.0021000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTGACTGGCGAGTTCCGGGA......................2311.0010000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTGACTGGCGAGTTCC..........................1911.0010000010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGAGTTCCGGGACAATGTGAAC............2511.0010000100
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGACTGGCGAGTTCCGGG.......................2011.0010001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCTGACTGGCGAGTTCCGGGAC.....................2511.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAGTTCCGGGACAATGTG...............2111.0011000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCTGACTGGCGAGTT............................1811.0011000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGACTGGCGAGTTCCGGGA......................2011.0010100000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTGACTGGCGAGTTCCG.........................1911.0010001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATCTGACTGGCGAGTTCCGGG.......................2311.0010000100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCTGACTGGCGAGTTCCGG........................2111.0010000100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTGAACCGGTTCCGC...1811.0010000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCATCTGACTGGCGAGTTCCGGGA......................2611.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGAACCGGTTCCGCA..1811.0010000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCGAGCATCTGACTGGC.................................1911.0010000010
droYak3
ATAT------------------------ACATATATA----TA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGTACTGTTCAGTT----------------------------CCACAATATGTGATTTTTTTGTTCATTATAAAGCCAATTAGGGGTTTTTAAAGCCGCTTATCTGGATAT---------------TCATTTTACAAGACTAT--------------------AACT-------------------C--------G-ATATCTAACCTTCTCCTGG-----GCG-ATTCCAGGCGAGCACCTGACTGGCGAGTTCCGGGACAATGTGAACCGGTTCCGCAAGSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGACTGGCGAGTTCCGG........................2119.00901110060000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGACTGGCGAGTTCCGGGAC.....................2416.00605000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAGTTCCGGGACAATGT................2013.00300000030000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGACTGGCGAGTTCCGGGA......................2112.00201000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTGAACCGGTTCCGCAA.2012.00200000020000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACCTGACTGGCGAGTTCCGGGAC.....................2612.00200100010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGACTGGCGAGTTCCGGGA......................2312.00200100010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCACCTGACTGGCGAGTTCCGG........................2412.00200000020000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTGACTGGCGAGTTCCGGGACA....................2611.00100100000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................GG-----GCG-ATTCCAGGCGAGCACCTGA......................................2411.00100010000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACCTGACTGGCGAGTTC...........................2011.00101000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTGACTGGCGAGTTCCGG........................2211.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGACTGGCGAGTTCCGG........................2011.00100000010000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGTTCCGGGACAATGTGAACC...........2411.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACCTGACTGGCGAGTTCCG.........................2211.00100000010000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGACTGGCGAGTTCCGGGAC.....................2211.00101000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCACCTGACTGGCGAGTTC...........................2211.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAATGTGAACCGGTTCC.....1911.00101000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAGCACCTGACTGGCGAGC.............................2211.00100100000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAATGTGAACCGGTTCCGC...2111.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTGACTGGCGAGTTCCGGGAC.....................2511.00100100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTGACTGGCGAGTTCC..........................2011.00100000010000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGGCGAGTTCCGGGAC.....................1911.00100100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTGACTGGCGAGTTCCGGGA......................2411.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACCTGACTGGCGAGTTCCGG........................2311.00100000010000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTGACTGGCGAGTTCCG.........................2111.00100100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACCTGACTGGCGAGTTCC..........................2111.00100000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGAGTTCCGGGACAATGTGAACC...........2611.00100000010000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGACTGGCGAGTTCCGGGAC.....................2311.00101000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTGGCGAGTTCCGGGACAAT..................2211.00100000010000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGACTGGCGAGTTCC..........................1911.00100100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTGACTGGCGAGTTC...........................1911.00101000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................G-ATATCTAACCTTCTCCTGG-----GCG-AT.......................................................2511.00100000010000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCACCTGACTGGCGAGTTCC..........................2211.00100000010000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCGAGCACCTGACTGGCGAGTTCCGGG.......................2911.00100000010000
droSec2
AAATT----------AAAAAAAATATATA----TA----GATATTACTT-ATATTTAAGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTG-CTCGTTCAATTTATAATCGTATATTAATTTGCTAATTA-------TATGTGACT----TATTCACCATTAAGCTCATAAG-----------CAAGGTCATTTGGAAATTGTAGAAGTTAATAG-------------------------------------AATC-------------------C--------CTCTCTTTTTCCTTTCCCTTG-----ACT-ATTCCAGGCGAGCACCTGACTGGCGAGTTCCGGGACAATGTGAACCGGTTCCGCAAGSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGACTGGCGAGTTCCGGGA......................2313.0031110
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGACTGGCGAGTTCCGGG.......................1912.0020110
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGACTGGCGAGTTCCGGGAC.....................2311.0011000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGACTGGCGAGTTCCGG........................2011.0010001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTGACTGGCGAGTTCCGGG.......................2311.0010100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGACTGGCGAGTTCCGGGACAAT..................2611.0010100
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGACTGGCGAGTTCC..........................1911.0011000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTGACTGGCGAGTTCCGGGA......................2411.0010100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACCTGACTGGCGAGTTCCGGGA......................2511.0011000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGACTGGCGAGTTCCGGG.......................2111.0010100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACCTGACTGGCGAGTTCCGGGAC.....................2611.0011000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCGGGACAATGTGAACCGGTTCCGCA..2711.0011000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATGTGAACCGGTTCCGC...1911.0010010
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGACTGGCGAGTTCCGGGACAAT..................2511.0011000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGACAATGTGAACCGGTTCC.....2111.0011000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAATGTGAACCGGTTCC.....1911.0011000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGACTGGCGAGTTCCGGG.......................2211.0011000
droSim2
TAATTT-AATAAATAAA--AAAATATATA----GA----GATATTACTT-ATATTTAAAG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCTCGTTCAATTTATAATCGTATATTAATTTGCTAATTA-------TATGTGACT----TATTCACCATTAAGCTCATAAG-----------CAAGGCCATCGGGAAATTGTAGAAGCTAATAG-------------------------------------AATC-------------------C--------CTCTCTTTTTCCTTTCCCTTG-----ACT-ATTCCAGGCGAGCACCTGACTGGCGAGTTCCGGGACAATGTGAACCGGTTCCGCAAGSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGACTGGCGAGTTCC..........................1915.00505000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGACTGGCGAGTTCCGGGAC.....................2414.00403100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGACTGGCGAGTTCC..........................1813.00300300000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTGACTGGCGAGTTC...........................1912.00202000000000000000
.........................................................................................................................................................................................................................................................................................................................................ATCGGGAAATTGTAGAAGCT.................................................................................................................................................................2012.00200200000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGACTGGCGAGTTCCGGGAC.....................2312.00202000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGACTGGCGAGTTCCGGGACAAT..................2711.00101000000000000000
.........................................................................................................................................................................................................................................................................................................................................ATCGGGAAATTGTAGAAGC..................................................................................................................................................................1911.00100100000000000000
................................................................................................................................................................................................................................................................................................................................................AATTGTAGAAGCTAATAG-------------------------------------AATC-------------------C--------.......................................................................................2311.00101000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAGCACCTGACTGGC.................................1811.00100010000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGGACAATGTGAACCGGC........1911.00110000000000000000
.....................................................................................................................................................................................................................................................................................................................................GGCCATCGGGAAATTGTAGAAGCT.................................................................................................................................................................2411.00101000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTGACTGGCGAGTTCCGGGAC.....................2511.00100010000000000000
................................................................................................................................................................................................................................................................................................................................................AATTGTAGAAGCTAATAG-------------------------------------AATC-------------------C--------C......................................................................................2411.00110000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCACCTGACTGGCGAGTTC...........................2111.00100100000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCACCTGACTGG..................................1560.17100000001000000000
dm3
AAATT----------AA--AAAATATATA----TA----GATATTACCTAATATAAAAGG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGTCTCTTTCAATTTATAATGGTATATTAATGTGCTAATTA-------TATGTGATT----GGTTCACTACTAAGCTTATAAA-----------CAAGGTCATCTGGAAATTGTTGAAGTTAATAG-------------------------------------AAAC-------------------C--------CTCTCCTTTTCCTTTCCCTTGATTTCCCG-ATTCCAGGCGAGCACCTGACTGGCGAGTTCCGGGACAATGTGAACCGGTTCCGCAAGSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTGACTGGCGAGTTCC..........................2019.0090000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400500000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGACTGGCGAGTTCCGG........................1913.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000100000000
.....................................................................................................................................................................................................................................................................................................................................GGTCATCTGGAAATTGTTG......................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGACTGGCGAGTTCCGGGAC.....................2412.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGACTGGCGAGTTCCGGG.......................2212.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTGGCGAGTTCCGGGACAATGTG...............2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTGACTGGCGAGTTCCGGGAC.....................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................TTATAAA-----------CAAGGTCATCTGGAAA............................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGTGAACCGGTTCCGCA..1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAATGTGAACCGGTTCCG....2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGCACCTGACTGGCGA...............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCGAGCACCTGACTGGCG................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGCACCTGACTGGCGAGTTCCGGGA......................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCAGGCGAGCACCTGACTGGCGAGT.............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCGAGCACCTGACTGGCGAGT.............................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTGACTGGCGAGTTCCG.........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGACTGGCGAGTTCCGGGA......................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGACTGGCGAGTTCCGG........................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATGTGAACCGGTTCCGCAA.2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCCGGGACAATGTGAACCGGT........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................ATAAA-----------CAAGGTCATCTGGAAAT...........................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCACCTGACTGGCGAGTTCCGGG.......................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCCGGGACAATGTGA..............1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAATGTGAACCGGTTCCGC...2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGCGAGCACCTGACTGGC.................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGACTGGCGAGTTCCGGGA......................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
.....................................................................................................................................................................................................................................................AATGGTATATTAATGTGCT......................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATGTGAACCGGTTCCG....1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGACTGGCGAGTTCC..........................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATGTGAACCGGTTCCGCA..2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCCTTTCCCTTGATTTCCC...........................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTGACTGGCGAGTTCCGGGA......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGCACCTGACTGGCGAGTTCCGGG.......................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
.........................................................................................................................................................................................................................................................................................GATT----GGTTCACTACTAAGC..............................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGACTGGCGAGTTCCGGGACA....................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................TGCTAATTA-------TATGTGATT----GG...........................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGACTGGCGAGTTCCGGG.......................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCAGGCGAGCACCTGACTGG..................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGACTGGCGAGTTCCGGGA......................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACTGGCGAGTTCCGGGA......................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGAGTTCCGGGACAATGT................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGTTCCGGGACAATGTGAACCGG.........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCACCTGACTGGCGAGT.............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGAGCACCTGACTGGCGAG..............................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGCGAGTTCCGGGACAATGTGAA.............2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000
droEug1
TAAGTT-AGTA----AA--AAAATATATA----A-----------------TAAAT---------------AACCTTTTGCAAGTATTTTTTAAAAATTAGTACACTATCTTATCATTAATATTCTTCCAA--AAAACTTTAATGA--G-TAATA---ACTCTGGTGTTGTTATTAGATTTAAGTATAGATTACTTTTTTTGTGGGTATATCATT--------------------------------------------------------------ATCTCACC----GGCTTA---------------------------------------------------------------------------------------------------------------------------------CCCCCATTCCCTTTCTCTTG-----CCC-ATTACAGGTGAGCACTTGACTGGCGAGTTCCGGGACAATGTCAACCGGTTCCGCAAGSizeHit CountTotal NormTotal
No Reads
droBia1
CTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCCCTTTCTTC-T-----GCC-GTTCCAGGCGAGCACCTGACCGGCGAGTTCCGGGACAACGTGAACCGGTTCCGCAAGSizeHit CountTotal NormTotal
No Reads
droTak1
TTTG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGGCAGT-------------------------------------------AATC-------------------T--------CACTTATCTCACTTTCTG--T-----TCT-GTTCCAGGCGAGCACTTGACCGGTGAGTTCCGGGACAATGTGAACCGGTTCCGCAAGSizeHit CountTotal NormTotal
No Reads
droEle1
CCAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C-------------------T--------TCCCCCTTTTCCT---------------T-CCTCCAGGCGAGCACTTGACTGGCGAGTTCCGGGACAATGTGAACCGGTTCCGCAAGSizeHit CountTotal NormTotal
No Reads
droRho1
ATGATT---------AA---AGAGAAATA-------------ATTATTTGATAAAAAAAGTGATTCCAAATAA-----------------------------------TCTTATGACAAATA------CAACTAAAACTTTAAATA--GATAAAAAAAA-----GT-TTATTATTTGACCTAAGTAGGGAT--CTTTTTTTGTGGGTGTATCATT--------------------------------------------------------------ATCTCAC--------------------------------------------------------------------------------------------------------------C-------------------C--------GTTCCCTTTCCCTTTCTCTTG-----CCC-ACTCCAGGCGAGCACTTGACTGGCGAGTTTCGGGACAATGTGAACCGGTTCCGCAAGSizeHit CountTotal NormTotal
No Reads
droFic1
TTTCCGCTTTAA----------------------------------------------------------------------------------------------------------------------------------ACGAAAC-TAATA---AGTTTTGTGATGTTATTAGATTTCAACATGGATTATATTTTTAATGGGCTTATTATT--------------------------------------------------------------ATCTCACC----GGATCACCT-----------------------------------------------------------------------------------------------TC-------------------CCACCT------TCTCACCCCTTTCTCTTG-----GCCAATTCCAGGTGAGCACTTGACTGGCGAGTTCCGGGACAATGTGAACCGGTTCCGCAAGSizeHit CountTotal NormTotal
No Reads
droKik1
CTTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCTTTTTTTTTACC---------CCT-TTTCCAGGCGAACACTTGACCGGTGAGTTCCGTGATAATGTTAACCGGTTCCGCAAGSizeHit CountTotal NormTotal
No Reads
droAna3
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTCCAGGCGAACACCTGACGGGAGAGTTCCGGGACAAGGTGAACCGGTTCCGTAAGSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAACACCTGACGGGAGAGTTCC..........................2513.003000030
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACACCTGACGGGAGAGTT............................2013.003000030
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGTTCCGGGACAAGGT................1913.003200010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACACCTGACGGGAGAGTTCCGGGA......................2612.002000020
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACGGGAGAGTTCCGGGACAAGGT................2411.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCGGGACAAGGTGAACC...........2011.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAACACCTGACGGGAGAGTTCC..........................2411.001000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACACCTGACGGGAGAGTTCCGG........................2411.001000010
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGTTCCGGGACAAGGTGAACC...........2311.001000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGACGGGAGAGTTCCGGGACAAGGTG...............2611.001000001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAACACCTGACGGGAGAGTT............................2211.001000010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTCCGGGACAAGGTGAACCGGTT.......2611.001000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACACCTGACGGGAGAGTTCCGG........................2311.001000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACACCTGACGGGAGAG..............................1811.001100000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAACACCTGACGGGAGAGT.............................2111.001000010
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGACGGGAGAGTTCCGG........................2111.001000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAACACCTGACGGGAGA...............................2011.001000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTCCGGGACAAGGTGAACC...........2111.001000010
droBip1
AATT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AGAG---------------------------------ACTCA-AG-------------------------------------AG-ACAGGTTTTTAATCATATACCCCCCACCTGGCCCCCTAATTGAAACCATT-----CCC-ATTCCAGGCGAACACCTGACGGGAGAGTTCCGGGACAAGGTGAACCGGTTCCGTAAGSizeHit CountTotal NormTotal
No Reads
dp5
ACTT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGCT--TCTTTT------------T-CCTGCAGGCGAGCACCTGACCGGAGAGTTTCGGGACAAAGTGAACCGGTTCCGCAAGSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTGACCGGAGAGTTTCGGGA......................2412.0020200000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGACCGGAGAGTTTCGG........................2111.0010000001000
..TT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCGCT--TCTTTT------------T-CCTGCAGT.................................................2311.0010100000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCGAGCACCTGACCGGAGA...............................2011.0010000001000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTGACCGGAGAGTTTCGG........................2211.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACCTGACCGGAGAGTTTCGGGAC.....................2611.0010100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACCTGACCGGAGAGTTTCGG........................2311.0010100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAAGTGAACCGGTTCCGCAA.2211.0010100000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGTTTCGGGACAAAGTG...............1911.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACCTGACCGGAGAGTTTCGGGA......................2311.0010100000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACCTGACCGGAGAGTTTCGGGAC.....................2511.0010100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTGACCGGAGAGTTTCGG........................2011.0010000000001
droWil2
CTTA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TCTCAATGTCTTTCTTT-------TTG-GTATTAGGTGAGCATTTAACTGGCGAATTCCGTGACAAGGTCAATCGTTTCCGTAAGSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTAACTGGCGAATTCCGT........................2014.00400400
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAAGGTCAATCGTTTCCGT...2113.00300300
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTAACTGGCGAATTCCGTGACAAGGT................2811.00100100
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGCGAATTCCGTGACAAGGTCAATC...........2611.00100010
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGCGAATTCCGTGACAAG..................2011.00100100
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTAACTGGCGAATTCCGTGA......................2211.00100100
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCCGTGACAAGGTCAATCGTTTCCGT...2811.00100100
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGGCGAATTCCGTGACAAGGTCAATC...........2711.00100100
droVir3
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTAAGGTGAGCACTTAACGGGCGAGTTTCGAGACAAGGTCAATCGGTTTCGCAAGSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCACTTAACGGGCGAGTTTCGA........................2414.004000000000000000200000110000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTAACGGGCGAGTTTCGA........................2012.002000000000000001001000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGCACTTAACGGGCGA...............................1911.001000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAGCACTTAACGGGCGAGTTTCGA........................2611.001000000000000000001000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACGGGCGAGTTTCGAGACAAG..................2211.001001000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACTTAACGGGCGAGTTTCG.........................2211.001000000000000001000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTAACGGGCGAGTTTCGA........................1911.001000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGGGCGAGTTTCGAGAC.....................2011.001000000000000000000000000000000000000000000000000000000000000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGTTTCGAGACAAGGTCAATCGGT........2711.001000000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGTCAATCGGTTTCGCA..1811.001000000000000000000000000000100000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCACTTAACGGGCGAGTTTC..........................2211.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAAGGTCAATCGGTTTCGCA..2211.001001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAAGGTCAATCGGTTT......1811.001000000000000001000000000000000000000000000000000000000000000000
droMoj3
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGTGAGCACTTAACGGGCGAGTTTCGGGACAAAGTCAATCGGTTCCGCAAGSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCACTTAACGGGCGAGTTTCGG........................2418.008400004
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTTAACGGGCGAGTTTCGG........................2213.003000003
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACTTAACGGGCGAGTTTCGG........................2312.002200000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCACTTAACGGGCGAGTTTCGGGA......................2612.002000002
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTTAACGGGCGAGTTTCGGGA......................2412.002100001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTAACGGGCGAGTTTCGG........................2012.002100001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCGGGACAAAGTCAATCGGTTC......2311.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAAAGTCAATCGGTTCCGCAA.2311.001100000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCACTTAACGGGCGAGTTTC..........................2011.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCACTTAACGGGCGAGTTTC..........................2211.001100000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCACTTAACGGGCGAGTT............................2011.001100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAAAGTCAATCGGTTCCGCAAG2311.001100000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAAAGTCAATCGGTTCCGC...1911.001100000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGAGTTTCGGGACAAAG.................1811.001001000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACTTAACGGGCGAGTTTCGGGA......................2511.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GACAAAGTCAATCGGTTCCGCA..2211.001100000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGCACTTAACGGGCGAGTTTC..........................2311.001000001
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTTAACGGGCGAGTTTC..........................1911.001100000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCACTTAACGGGCGAGTTTCGGGACAA...................2811.001000001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGGGACAAAGTCAATCGGTTC......2211.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACGGGCGAGTTTCGGGA......................1911.001000001
droGri2
AGCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTAATTT------TTTTTTTTTATTTTG-AACACGA-------------------CACAATAAAT-----------------------------GCACTGTTAATAATTGATTATTTGAATAT---------------TTTGTTTAAACATTTATTGATTGCAAGTAATCAATGCAATG-------------------C--------A-------TTTGTTTTTCATA-----ACT-TTTCCAGGTGAGCATTTGACGGGCGAGTTTCGAGACAATGTAAATCGCTTCCGCAAGSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 10:19 PM