ID:

der_427

 Coordinate:

scaffold_4690:11429199-11429492 -

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

Flybase annnotation

exon [dere_GLEANR_2789:2]; CDS [Dere\GG17901-cds]; exon [dere_GLEANR_2789:1]; CDS [Dere\GG17901-cds]; intron [Dere\GG17901-in]

No Repeatable elements found

Sense Strand Reads

##################################################------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
TCAACGGCAACGAGTTCGTGCTGCAGTGTGACACCAACTTCCAGGAAACGGTAAGGACAACGGTTAGTTTTCACGGTGTACCTTCTTCAGGTTTCCACGGATTCATTCAGCTTAGATATCTGTATTGAATATAGTTGTCCTCCTCCTCAGATATGAGAAAGTCCGCATTTTACAAAATTTAACCCAATGCAGTTCTATTTAAACCGATCATTAAAGTGTATGTTCTTAAAAACGTTGTTAATAAATTGAATTTGCTCTTATTCCGAGAATGTGAAACCGAAAAGTCCTTCAAGTTCCTATGGTTAATACAAATATACATCTTTAATTCCATTTATCCTTCTCAGGATGTCACACTGCTGTTGCACGTACTCAACTTTACCACACTGCTGATCGA
**************************************************..(((((...(((((.........((...((((.....))))..)).((((((...........((((.((((((...)))))).))))......((((....))))..)))))).........((((..(((........)))..)))).)))))...(((((((((((((((...........(((((((.....(((((((.((.(((((...))))).))...............))))))).....)))))))..)))))))).)))))))........))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total M055
female body
 M057
embryo
 V108
head
 V040
embryo
 GSM1528801
follicle cells		 V107
male body		 V060
head
.................................................................................................................................................................................................................................................................................................................................TTAATTCCATTTATACTTCTCCA.................................................. 23 3 2 170.50 341 184 81 44 22 0 5 5
................................................................................................................................................................................................................................................................................................................................TTTAATTCCATTTATACTTCTCCA.................................................. 24 3 2 115.50 231 115 35 51 12 6 10 2
...................................................................................................................................................................................................................................................................................................................................AATTCCATTTATACTTCTCCA.................................................. 21 3 9 32.33 291 95 32 97 39 0 23 5
..................................................................................................................................................................................................................................................................................................................................TAATTCCATTTATACTTCTCCA.................................................. 22 3 4 29.00 116 48 13 41 4 0 5 5
....................................................................................................................................................................................................................................................................................................................................ATTCCATTTATACTTCTCCA.................................................. 20 3 20 18.65 373 215 16 101 10 0 24 7
.................................................................................................................................................................................................................................................................................................................................TTAATTCCATTTATACTTCTCC................................................... 22 2 2 9.50 19 2 17 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................TTTAATTCCATTTATACTTCTCC................................................... 23 2 2 8.00 16 3 13 0 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................GGTTTAATTCCATTTATCCTTCTCC................................................... 25 3 2 6.00 12 0 0 0 0 12 0 0
.................................................................................................................................................................................................................................................................................................................................TTAATTCCATTTATACTTCTC.................................................... 21 1 2 5.50 11 5 6 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................GTTTAATTCCATTTATCCTTCTCCA.................................................. 25 3 1 5.00 5 0 0 0 0 5 0 0
...............................................................................................................................................................................................................................................................................................................................GTTTAATTCCATTTATCCTTCTCC................................................... 24 2 1 4.00 4 0 0 0 0 4 0 0
................................................................................................................................................................................................................................................................................................................................TTTAATTCCATTTATACTTCCCA................................................... 23 2 1 3.00 3 0 2 1 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................AATTCCATTTATACTTCTCC................................................... 20 2 4 3.00 12 2 8 1 1 0 0 0
..................................................................................................................................................................................................................................................................................................................................TAATTCCATTTATACTTCTCC................................................... 21 2 2 2.50 5 2 3 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................AATTCCATTTATACTTCTC.................................................... 19 1 4 2.50 10 0 7 1 2 0 0 0
...................................................................................................................................................................................................................................................................................................................................AATTCCATTTATACTTCTCA................................................... 20 1 3 2.00 6 1 1 3 0 0 1 0
...............................................................................................................................................................................................................................................................................................................................CTTTAATTCCATTTATACTTCTCCA.................................................. 25 3 1 2.00 2 0 2 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................TTTAATTCCATTTATACTTCTC.................................................... 22 1 2 2.00 4 1 3 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................TAATTCCATTTATACTTCTC.................................................... 20 1 2 1.50 3 1 1 1 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................AATTCCATTTATCCTTCTCC................................................... 20 1 1 1.00 1 0 1 0 0 0 0 0
.........ACGAGTTCGTGCTGCAGTGTGA........................................................................................................................................................................................................................................................................................................................................................................... 22 0 1 1.00 1 0 0 0 0 0 1 0
.....GGCAACGAGTTCGTGCTGCAGTGTGA........................................................................................................................................................................................................................................................................................................................................................................... 26 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................................................................................................................................................................................................................................................................GTCACACTGCTGTTGCACGTA.......................... 21 0 1 1.00 1 0 0 1 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................GTTTAATTCCATTTATACTTCTCCG.................................................. 25 3 2 1.00 2 1 1 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................TTAATTCCATTTATACTTCCCA................................................... 22 2 1 1.00 1 0 1 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................TAATTCCATTTATACTTCTCA................................................... 21 1 1 1.00 1 0 1 0 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................GTTTAATTCCATTTATGCTTCTCCG.................................................. 25 3 1 1.00 1 0 0 0 0 1 0 0
................................................................................................................................................................................................................................................................................................................................TGTAATTCCATTTATACTTCTCC................................................... 23 3 2 1.00 2 0 2 0 0 0 0 0
..................................................................................................................................................................................................................................................................................................................................TAATTCCATTTATACTTCCCA................................................... 21 2 1 1.00 1 0 0 1 0 0 0 0
........AACGAGTTCGTGCTGCAGTGT............................................................................................................................................................................................................................................................................................................................................................................. 21 0 1 1.00 1 1 0 0 0 0 0 0
.....................................................................................................................................................................................ACCCAATGCAGTTCTACTTATT............................................................................................................................................................................................... 22 3 1 1.00 1 0 0 0 1 0 0 0
................................................................................................................................................................................................................................................................................................................................TTTAATTCCATTTATACTTCTCAA.................................................. 24 2 1 1.00 1 0 0 1 0 0 0 0
..............................................................................................................................................................................................................................................................................................................................TGTTTAATTCCATTTATCCTTCTCCA.................................................. 26 3 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................AATTCCATTTATACTTCTCCG.................................................. 21 2 1 1.00 1 0 1 0 0 0 0 0
.........ACGAGTTCGTGCTGCAGTGTGACACCA...................................................................................................................................................................................................................................................................................................................................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................TTAATTCCATTTATACTTCTCAA.................................................. 23 2 1 1.00 1 0 0 1 0 0 0 0
.....GGCAACGAGTTCGTGCTGCAGTGT............................................................................................................................................................................................................................................................................................................................................................................. 24 0 1 1.00 1 0 0 0 0 0 1 0
....................................................................................................................................................................................................................................................................................................................................ATTCCATTTATACTTCTCA................................................... 19 1 3 0.67 2 1 0 0 0 0 0 1
.....................................................................................................................................................................................................................................................................................................................................TTCCATTTATACTTCTCCG.................................................. 19 2 2 0.50 1 0 0 0 1 0 0 0
....................................................................................................................................................................................................................................................................................................................................ATTCCATTTATACTTCTCCG.................................................. 20 2 2 0.50 1 0 0 1 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................GTTTAATTCCATTTATACTTCTCA................................................... 24 2 2 0.50 1 0 1 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................TTTAATTCCATTTATACTTCTCGA.................................................. 24 3 2 0.50 1 0 0 1 0 0 0 0
...............................................................................................................................................................................................................................................................................................................................GTTTAATTCCATTTATCCTTCT..................................................... 22 1 2 0.50 1 0 0 0 0 1 0 0
................................................................................................................................................................................................................................................................................................................................GCTAATTCCATTTATACTTCTC.................................................... 22 3 2 0.50 1 1 0 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................ATTCCATTTATACTTCTCC................................................... 19 2 6 0.50 3 2 0 1 0 0 0 0
................................................................................................................................................................................................................................................................................................................................TGTAATTCCATTTATACTTCTC.................................................... 22 2 2 0.50 1 0 1 0 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................ATTCCATTTATACTTCTCAA.................................................. 20 2 4 0.50 2 0 0 2 0 0 0 0
...........................................................................................................................................................................................................................................................................................GTCCTTCGACTACCTATGGTT.......................................................................................... 21 3 2 0.50 1 0 0 0 1 0 0 0
...............................................................................................................................................................................................................................................................................................................................GTTTAATTCCATTTATACTTCCCA................................................... 24 3 3 0.33 1 1 0 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................TTTACTTCCATTTATACTTCCCA................................................... 23 3 3 0.33 1 0 0 1 0 0 0 0
................................................................................................................................................................................................................................................................................................................................TTTAATTCCATTTATACTTCTCCC.................................................. 24 3 3 0.33 1 0 0 1 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................TTAATGCCATTTATACTTCTCC................................................... 22 3 3 0.33 1 0 1 0 0 0 0 0
.................................................................................................................................................................................................................................................................................................................................TGAATTCCATTTATACTTCTC.................................................... 21 2 4 0.25 1 0 1 0 0 0 0 0
................................................................................................................................................................................................................................................................................................................................TTTTATTCCATTTATACTTCTCC................................................... 23 3 4 0.25 1 0 1 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................AATTCCATTTATACTTCCCA................................................... 20 2 4 0.25 1 0 0 1 0 0 0 0
....................................................................................................................................................................................................................................................................................................................................ATTCCATTTATACTTCTC.................................................... 18 1 5 0.20 1 0 0 1 0 0 0 0
..............GTCGTGCTGCATTGTGAAAC........................................................................................................................................................................................................................................................................................................................................................................ 20 3 5 0.20 1 0 0 0 1 0 0 0
..............TTCGAGCTTCATTGTGACAC........................................................................................................................................................................................................................................................................................................................................................................ 20 3 7 0.14 1 0 0 0 1 0 0 0
....................................................................................................................................................................................................................................................................................................................................ATTCCATTTATACTTCCCA................................................... 19 2 8 0.13 1 0 1 0 0 0 0 0
...................................................................................................................................................................................................................................................................................................................................AATTCCATTTATACTTCTCCC.................................................. 21 3 10 0.10 1 0 1 0 0 0 0 0
.....................................................................................................................................................................................................................................................................................CGAGAAGTCCATCAAGTACC................................................................................................. 20 3 16 0.06 1 1 0 0 0 0 0 0
..............................................................GTTAGGTTACACGATGTA.......................................................................................................................................................................................................................................................................................................................... 18 3 20 0.05 1 0 0 1 0 0 0 0
.......................................................................................................................................................TATGAGATAGTGTGCATTT................................................................................................................................................................................................................................ 19 3 20 0.05 1 1 0 0 0 0 0 0

Anti-sense strand reads

AGTTGCCGTTGCTCAAGCACGACGTCACACTGTGGTTGAAGGTCCTTTGCCATTCCTGTTGCCAATCAAAAGTGCCACATGGAAGAAGTCCAAAGGTGCCTAAGTAAGTCGAATCTATAGACATAACTTATATCAACAGGAGGAGGAGTCTATACTCTTTCAGGCGTAAAATGTTTTAAATTGGGTTACGTCAAGATAAATTTGGCTAGTAATTTCACATACAAGAATTTTTGCAACAATTATTTAACTTAAACGAGAATAAGGCTCTTACACTTTGGCTTTTCAGGAAGTTCAAGGATACCAATTATGTTTATATGTAGAAATTAAGGTAAATAGGAAGAGTCCTACAGTGTGACGACAACGTGCATGAGTTGAAATGGTGTGACGACTAGCT
**************************************************..(((((...(((((.........((...((((.....))))..)).((((((...........((((.((((((...)))))).))))......((((....))))..)))))).........((((..(((........)))..)))).)))))...(((((((((((((((...........(((((((.....(((((((.((.(((((...))))).))...............))))))).....)))))))..)))))))).)))))))........))))).....************************************************** 		Read size # Mismatch Hit Count Total Norm Total V107
male body		 M055
female body
 GSM1528801
follicle cells
........................................................................................................................................................................................................................................................................................................................GTATGAAGAAATTAAGGT................................................................ 18 2 12 0.25 3 0 3 0
.....................................................................GAGTGCCATATGGAAGTAG.................................................................................................................................................................................................................................................................................................................. 19 3 8 0.13 1 1 0 0
............................................................................................................................................................................................................................................................................................................................................ATAGGATGTGTCCTACAGA........................................... 19 3 10 0.10 1 1 0 0
..................................................................................................................................................................................................................................................................................................................................................AGAGCCCTGCAGTGTG........................................ 16 2 15 0.07 1 0 0 1
......................................................................................................................................................................................................................................................................................................................AGATATGAAGAAATTAAGGT................................................................ 20 3 18 0.06 1 1 0 0
...................................................................AGGAGTGCCATATGGAAG..................................................................................................................................................................................................................................................................................................................... 18 3 20 0.05 1 1 0 0

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4690:11429149-11429542 - der_427 TCAACGGCAACGAGTTCGTGCTGCAGTGTGACACCAACTTCCAGGAAACGGTAAGGACAA---------------------------CGGTTAGTTTTC-ACGGTGTAC-----------------------------------------------------------------CT---------TCTTCAGGTTTCCACGGATTCATTC--------------------------------------------------------------------------------------AGC---TTA---------------------GATATCTGTAT---TGAA----TAT------AGT--------------------TGTCCTCCTCC------------TCAGATATGAGAAAGTCCGCAT--------------TTTACAAAATTTAACCCAATGCAGTTCTATTTAAA-CCGATCATTAAAGTGTA---TGTTCTTAAAAACGTTGTTAAT-AAATTGAATTTGCTCTTATTCCGAGAATGTGAAA-CCGAAA--A-GT-CCTTCAAGTTCCTATGGTTAATACAA---------------------------------------------------ATATA--------------CATCTTTAATTCCATT--TATCCT---TCTCAGGATGTCACACTGCTGTTGCACGTACTCAACTTTACCACACTGCTGATCGA
droYak3 X:9813670-9814072 + TCAACGGCAACGAGTTTGTGCTGCAGTGTGACACCAACTTCCAGGAAACGGTAAGGACAA---------------------------CGGTTAGTTCTC-ATGATGTAT-----------------------------------------------------------------CCTTGAACAATTCTTCAGGTTTCCACGGATTCATTC--------------------------------------------------------------------------------------AGC---TTA---------------------GATATCTGTAT---TGAA----TCTATGAAAAGT--------------------TGTCCTT---GATGAAATGAATAGCAG------------------------AACTATTT---ACTAAATTTGACCTAATGCAGTTCCTTTAAAA-CCTATTAATAAAGTGTA---TGTTCTTCAAAACGTTGTTAAT-AAATTTAA--TGCTCTTATTCCGAAAATGTGAAA-CCCAAA--A-GA-CCTTCAAGCTCTTATGATAAATACAA---------------------------------------------------ATACA--------------CATATATAATGCCATT--TATCAT---TCTCAGGATGTCACACTGCTACTGCACGTACTCAACTTTACCACACTGCTGATCGA
droSec2 scaffold_37:191879-192310 + TCAACGGCAACGAGTTCGTGCTGCAGTGCGACACCAACTTCCAGGAAACGGTAAGGACAA---------------------------CGGTTAGTTTTC-ACGGTGTAC-----------------------------------------------------------------CATTGAAAAAGTCTTCAGGTTTCCACGGATTCATTC--------------------------------------------------------------------------------------GATTCATTA---------------------GATATCATTATCTTTTAA----TCTATGAGAAAA--------------------TTTCCTT---GTTTAAAAGAATAGCAGAATTCAGAAAGTCCGCATGAGAAGAACTATTTTTGACCCAATTTGACCTAAAGCAGTTTCTTTAAAA-CCTATCAA-----TGTA---TGCTCTTCAAAACGTTGTTAAT-AAA-TGAATTTGCTCTTATTCCGAGAATGTGAAA-GCCAAA--A-GA-CCCTGAAGTTCCTACGGTTAATACGA---------------------------------------------------ATATA--------------CATCTATATTTCCATT--TATCCT---TCTCAGGATGTCACACTACTGTTGCACGTACTCAACTTTACCACACTGCTGATCGA
droSim2 x:14785593-14786029 + TCAACGGCAACGAGTTCGTGCTGCAGTGCGACACCAACTTCCAGGAAACGGTAAGGACAA---------------------------CGGTTAGTTTTC-ACGGTGTAC-----------------------------------------------------------------CATTGAAAAAGTCTTCAGGTTTCCACGGATTCATTC--------------------------------------------------------------------------------------GATTCATTA---------------------GATATCAGTATCTTTTAA----TCTATGAGAAAA--------------------TTTCCTT---GTTGAAAAGAATAGCAGAATTCAGAAAGTCCGCATGAGAAGAACTATTTTTGACCCAATTTGACCTAAAGCAGTTTCTTTAAAA-CCTATCAATAAACTGTA---TGTTCTTCAAAACGTTGTTAAT-AAA-TGAATTTGCTCTTATTCCGAGAATGTGAAA-GCCAAA--A-GA-CCCTGAAGTTCCTACGGTTAATACGA---------------------------------------------------ATATA--------------CATCTATATTTCCATT--TATCCT---TCTCAGGATGTCACACTACTGTTGCACGTACTCAACTTTACCACACTGCTGATCGA
dm3 chrX:15608365-15608799 + TCAACGGCAACGAGTTCGTGCTGCAGTGCGACACCAACTTCCAGGAAACGGTAAGGACAA---------------------------CGGTTAGTGTTC-ACGGTGTAT-----------------------------------------------------------------CATTGAAAAAGTCTTTAGGTTTCCACGGATTCATTC--------------------------------------------------------------------------------------GATTTATTA---------------------GATATCTGTATCTTTTAA----TCTATGAAAAAAAAAAAGAATAACAGAATAATAATCTAT---GTTGAAAAGAATAACAGAATTCAAAAAGCCCGCATGAGAGGAACTATTT----------TTGACCTAATGCAGTCCCTTTAT----------ATAAACTGTA---TGCTCTTCAAAACGTTGTTAAA-AAATTGAATTTGCTCTTATTCCGAGAATGTGAAA-GCCAAA--A-GA-CCTTGAATTT----GGGTTAATACAA---------------------------------------------------ATATA--------------CATCTATATTTCCATT--TATCCT---TCTCAGGATGTCACACTACTGCTGCACGTACTCAACTTTACCACACTGCTGATCGA
droEug1 scf7180000409533:788340-788722 + TCAATGGCAACGAGTTCGTGCTGCAGTGCGACACCAACTTTCAGGAAACGGTAAGGACAA---------------------------CGGTTAGTTTTC-ACAGTGTAG--------------------------------------------------------------TACCTCTAAAAATGTTTCAAATTTCTCACGAATACCTTTTTTTTTCTCCAAATTTT---------------------------------------------------------TCCTATCGCTTTAAA---TTT---------------------TATTTCTGTAT---GGAATTCATCTTTGAAAAA-------------------------------------------------------------------------ACAATTT---GAGAAGTTCATCTTACTGCGATTCC---------------------------------------------------------------ATATTATTTTAGGATTTTAAATGGATAAGGAATAAAATGTATTAATTT--------AAA----------CCG----------ACATCGACCCCATAAAAATGAT----------------TATTTTTCTAAATATGTATAATAAAATG--TGTTTT---CCTCAGGATGTCACTCTGCTGTTGCACGTACTTAACTTCACCACTTTGCTGATCGA
droBia1 scf7180000302421:2429089-2429497 + TGAACGCCAACGAGTTCGTGCTGCAGTGCGACACCAATTTCCAGGAAACGGTAAGGACAT---------------------------CGTTTACTTTTCTACGGTGTATCCCCAAAAAAGTCCCAGAATTCCCTG---------------------------------------------------------------AAGGTTCCATCT---TGTGTTAAAGTTTCATCAATTAAATGTACAAAAATTCGCAAATCTATAAAGTTTTATGTATATACAAAAGATCC----------------------------------------------------------------------------------------------------------------TATCACAGAATT--------GGGC-----------------------------------------------------------------------------------------TTGAA-AAGTTGTTTTCGATATAATTCTGGGACTTCGAAA-CACAAG--ACAAACTGTGTTGTTCTTT------AAAAGATT-ATATTGGGTAT--CGCTACAC------CACCCATATGCTTTCTGTGA-AT-----TATTGTTG----TATATATTACTCTATT--TTTCCT---CCCCAGGATGTCACACTGCTGCTGCACGTACTTAACTTCACCACACTGCTGATTGA
droTak1 scf7180000415909:67084-67306 - TCAACGCCAACGAGTTCGTGCTGCAGTGCGACACCAATTTCCAGGAAACGGTGAGGATTAGCCCTAAAAGTTTCTATCTATGCAAAGAGTATGCAATACTATGGTTTATTCTCATAGATTTACCAGAATTTCCAGTATTAGTAACTAAAATCCATTTCAAATCTATTGTAGGAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAAAGAGTAATTTTTTATATCGAATTCGATCTTATTCTGTGAATTTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droEle1 scf7180000491006:1086924-1087006 - TCAACGCCAACGAGTTCGTGCTGCAGTGCGACACCAACTTCCAGGAAACGGTAAGAACAA---------------------------CGGTTAGTTTTC-CAGGTTTTC-----------------------------------------------------------------CT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droRho1 scf7180000779985:1548528-1548609 - TCAACGCCAACGAGTTCGTGCTGCAGTGCGACACCAACTTCCAGGAAACGGTAAGGACAA---------------------------CGGTTAGTTTCC-CCGGTTTAC-----------------------------------------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droFic1 scf7180000454038:880763-881170 + TCAACGCCAATGAGTTCGTGCTGCAGTGCGACACCAATTTCCAGGAAACGGTAAATAAAT---------------------------C-----------------------------------------------------------------------------------------------------------------------ATTTTCTATGTCCA----TA---------------------------------------------------------CCCTAT-GCTTTAAG---CTGGAAGAATTATACGGAACTAGTGAATTCTGTAA---AGAC----AATATA-------------------------------------CCAAGAAGTATTGCAG------------------------AACTATTT---GT---------A---ATG--------ATAAAACCCTACAGATG--GTTTACGTTGCTTCTGAAGAAGTTGTTATTCAAGTCGAAATTGATCCTGTTCTAGGAACGTGAAG-CCTAAA--CCGA-CCTTTTAGGTCTTA------AAACAATAGATATCGGATAAAGCGCTACGG--------------GGGAACCTGTGCAATACACTGATTTTCT-A-ATATCTA-AATACCATT--TAT-CT---CAACAGGACGTCACACTGCTGCTGCACGTACTTAACTTCACCACACTGCTGATCGA
droKik1 scf7180000302621:575860-575934 + TTGATTCTATCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--TATGAT---TTCTAGGATGTCACTTTGCTGCTGCATGTCCTCAATTTCACCACACTGCTGATCGA
droAna3 scaffold_12929:2651299-2651365 - CCATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTT---CCCCAGGACGTCACTCTGCTGCTGCACGTGCTGAACTTCACCACCCTGCTGATAGA
droBip1 scf7180000396002:5351-5414 + TATCCTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---TTCAAGGATGTCACATTGCTGCTGCACGTGCTCAACTTCACCACACTGCTGATAGA
dp5 XL_group1a:7965655-7965723 - AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCCTTA----TATC---CCGCAGGACGTTACACTGCTGCTGCATGTACTCAACTTTACGACACTCCTGATCGA
droPer2 scaffold_15:321484-321552 - AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCCTTA----TATC---CCGCAGGACGTTACACTGCTGCTGCATGTGCTCAACTTTACGACACTCCTGATCGA
droWil2 scf2_1100000004515:3475535-3475622 - AATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA---------------------------------------------------ATATG--------------CTTTAATGTTTTTAAC----TTGT---TTGTAGGATGTCACTCTATTGCTTCATGTACTGAACTTTACCACATTGCTCATTGA
droVir3 scaffold_12928:4176802-4176883 + CAATTTTAA------------------------------------------------------------------------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCCAATT--TTTCTT---TAACAGGATGTTACCCTGCTGCTGCACGTACTCAATTTCACAACTCTGCTGATTGA
droMoj3 scaffold_6328:1360067-1360160 + ATATTGATATAAATTTGA---------------------------------------------------------------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTCCCATT--GTCCTTCTCTCACAGGATGTTACTTTGCTACTGCACGTACTCAATTTCACAACATTGCTCATCGA
droGri2 scaffold_14853:898301-898424 + CCAAAAAT---------GTGCCAAAATGT-----C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTTCTTA-----------------------------------------------------------------------------------------------------------------TTGTTATCCTTTCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------------TCTGTCTTTCGTTGTCTCTTTT---ATTCAGGATGTGACCCTGCTGCTGCACGTACTCAATTTTACAACACTGCTCATTGA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
TCAACGGCAACGAGTTCGTGCTGCAGTGTGACACCAACTTCCAGGAAACGGTAAGGACAA---------------------------CGGTTAGTTTTC-ACGGTGTAC-----------------------------------------------------------------CT---------TCTTCAGGTTTCCACGGATTCATTC--------------------------------------------------------------------------------------AGC---TTA---------------------GATATCTGTAT---TGAA----TAT------AGT--------------------TGTCCTCCTCC------------TCAGATATGAGAAAGTCCGCAT--------------TTTACAAAATTTAACCCAATGCAGTTCTATTTAAA-CCGATCATTAAAGTGTA---TGTTCTTAAAAACGTTGTTAAT-AAATTGAATTTGCTCTTATTCCGAGAATGTGAAA-CCGAAA--A-GT-CCTTCAAGTTCCTATGGTTAATACAA---------------------------------------------------ATATA--------------CATCTTTAATTCCATT--TATCCT---TCTCAGGATGTCACACTGCTGTTGCACGTACTCAACTTTACCACACTGCTGATCGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTCCATT--TATCCT---TCTCC...................................................2011.0010100000
.........ACGAGTTCGTGCTGCAGTGTGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000100
.....GGCAACGAGTTCGTGCTGCAGTGTGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0011000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACACTGCTGTTGCACGTA..........................2111.0010000010
........AACGAGTTCGTGCTGCAGTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0011000000
.........ACGAGTTCGTGCTGCAGTGTGACACCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0011000000
.....GGCAACGAGTTCGTGCTGCAGTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000100
droYak3
TCAACGGCAACGAGTTTGTGCTGCAGTGTGACACCAACTTCCAGGAAACGGTAAGGACAA---------------------------CGGTTAGTTCTC-ATGATGTAT-----------------------------------------------------------------CCTTGAACAATTCTTCAGGTTTCCACGGATTCATTC--------------------------------------------------------------------------------------AGC---TTA---------------------GATATCTGTAT---TGAA----TCTATGAAAAGT--------------------TGTCCTT---GATGAAATGAATAGCAG------------------------AACTATTT---ACTAAATTTGACCTAATGCAGTTCCTTTAAAA-CCTATTAATAAAGTGTA---TGTTCTTCAAAACGTTGTTAAT-AAATTTAA--TGCTCTTATTCCGAAAATGTGAAA-CCCAAA--A-GA-CCTTCAAGCTCTTATGATAAATACAA---------------------------------------------------ATACA--------------CATATATAATGCCATT--TATCAT---TCTCAGGATGTCACACTGCTACTGCACGTACTCAACTTTACCACACTGCTGATCGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACTGCACGTACTCAACTT..................2111.00100100000000
...................GCTGCAGTGTGACACCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000
.....GGCAACGAGTTTGTGCTGCAGTGTGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00101000000000
...........................................................................................................................................................................................................................................................................................................................................CTGTAT---TGAA----TCTATGAAAAGT--------------------TGTCC........................................................................................................................................................................................................................................................................................................................................................................2711.00100000010000
.......CAACGAGTTTGTGCTGCAGTGT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.00101000000000
.............................GACACCAACTTCCAGGAAACGGAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.00101000000000
droSec2
TCAACGGCAACGAGTTCGTGCTGCAGTGCGACACCAACTTCCAGGAAACGGTAAGGACAA---------------------------CGGTTAGTTTTC-ACGGTGTAC-----------------------------------------------------------------CATTGAAAAAGTCTTCAGGTTTCCACGGATTCATTC--------------------------------------------------------------------------------------GATTCATTA---------------------GATATCATTATCTTTTAA----TCTATGAGAAAA--------------------TTTCCTT---GTTTAAAAGAATAGCAGAATTCAGAAAGTCCGCATGAGAAGAACTATTTTTGACCCAATTTGACCTAAAGCAGTTTCTTTAAAA-CCTATCAA-----TGTA---TGCTCTTCAAAACGTTGTTAAT-AAA-TGAATTTGCTCTTATTCCGAGAATGTGAAA-GCCAAA--A-GA-CCCTGAAGTTCCTACGGTTAATACGA---------------------------------------------------ATATA--------------CATCTATATTTCCATT--TATCCT---TCTCAGGATGTCACACTACTGTTGCACGTACTCAACTTTACCACACTGCTGATCGASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........AACGAGTTCGTGCTGCAGTGCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020110
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTACTGTTGCACGTACT........................1911.0010010
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTACCACACTGCTGATCGA2011.0010010
........................AGTGCGACACCAACTTCCAGGAAACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010010
.........ACGAGTTCGTGCTGCAGTGCGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010010
.......CAACGAGTTCGTGCTGCAGTGCGACAC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010100
...............................CACCAACTTCCAGGAAACGG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
..................................CAACTTCCAGGAAACGGTAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010010
.......CAACGAGTTCGTGCTGCT................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1840.2510010
droSim2
TCAACGGCAACGAGTTCGTGCTGCAGTGCGACACCAACTTCCAGGAAACGGTAAGGACAA---------------------------CGGTTAGTTTTC-ACGGTGTAC-----------------------------------------------------------------CATTGAAAAAGTCTTCAGGTTTCCACGGATTCATTC--------------------------------------------------------------------------------------GATTCATTA---------------------GATATCAGTATCTTTTAA----TCTATGAGAAAA--------------------TTTCCTT---GTTGAAAAGAATAGCAGAATTCAGAAAGTCCGCATGAGAAGAACTATTTTTGACCCAATTTGACCTAAAGCAGTTTCTTTAAAA-CCTATCAATAAACTGTA---TGTTCTTCAAAACGTTGTTAAT-AAA-TGAATTTGCTCTTATTCCGAGAATGTGAAA-GCCAAA--A-GA-CCCTGAAGTTCCTACGGTTAATACGA---------------------------------------------------ATATA--------------CATCTATATTTCCATT--TATCCT---TCTCAGGATGTCACACTACTGTTGCACGTACTCAACTTTACCACACTGCTGATCGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACACTACTGTTGCACGTACT........................2312.00200110000000000000
......................................TTCCAGGAAACGGTAAGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.00200020000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACTACTGTTGCACGTACT........................2111.00101000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................AAGAACTATTTTTGACCC...........................................................................................................................................................................................................................................................................................................1811.00110000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-CCTATCAATAAACTGTA---..........................................................................................................................................................................................................................................................2011.00100100000000000000
......................................TTCCAGGAAACGGTAAGGACAA---------------------------CGGA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.00100000000000010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACGTACTCAACTTTACCACACG.........2311.00100100000000000000
...............................CACCAACTTCCAGGAAACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAA-CCTATCAATAAACTGTG---..........................................................................................................................................................................................................................................................2011.00100100000000000000
........AACGAGTTCGTGCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1520.50100000010000000000
dm3
TCAACGGCAACGAGTTCGTGCTGCAGTGCGACACCAACTTCCAGGAAACGGTAAGGACAA---------------------------CGGTTAGTGTTC-ACGGTGTAT-----------------------------------------------------------------CATTGAAAAAGTCTTTAGGTTTCCACGGATTCATTC--------------------------------------------------------------------------------------GATTTATTA---------------------GATATCTGTATCTTTTAA----TCTATGAAAAAAAAAAAGAATAACAGAATAATAATCTAT---GTTGAAAAGAATAACAGAATTCAAAAAGCCCGCATGAGAGGAACTATTT----------TTGACCTAATGCAGTCCCTTTAT----------ATAAACTGTA---TGCTCTTCAAAACGTTGTTAAA-AAATTGAATTTGCTCTTATTCCGAGAATGTGAAA-GCCAAA--A-GA-CCTTGAATTT----GGGTTAATACAA---------------------------------------------------ATATA--------------CATCTATATTTCCATT--TATCCT---TCTCAGGATGTCACACTACTGCTGCACGTACTCAACTTTACCACACTGCTGATCGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCACACTACTGCTGCACGTACT........................2313.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................TTCCAGGAAACGGTAAGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2013.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000003
.........ACGAGTTCGTGCTGCAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AACGAGTTCGTGCTGCAGTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2113.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
................................ACCAACTTCCAGGAAACG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1813.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000001000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACTACTGCTGCACGTACTCAAC....................2512.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000002000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................ACCAACTTCCAGGAAACGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000100000000000000000000000000
.........ACGAGTTCGTGCTGCAGTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2012.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AACGAGTTCGTGCTGCAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1912.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACTGCTGCACGTACTCAA.....................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000101000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GCAACGAGTTCGTGCTGCAGTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2312.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGCACGTACTCAACTTTACCACT...........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TCCAGGAAACGGTAAGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GGCAACGAGTTCGTGCTGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGCTGCACGTACTCA......................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................ACCAACTTCCAGGAAACGGTAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTGCTGCACGTACTCAAC....................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACGTACTCAACTTTACCACAC..........2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACTACTGCTGCACGTAC.........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................GTGCGACACCAACTTCCAGGAAACGGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTGCTGCACGTACTCAACTTTACCACA...........3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................TGCAGTGCGACACCAACTTCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGTCACACTACTGCTGCAC.............................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ACGGCAACGAGTTCGTGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................CCAGGAAACGGTAAGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CTTCCAGGAAACGGTAAGGACAA---------------------------CG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GGCAACGAGTTCGTGCTGCAGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................GTAT-----------------------------------------------------------------CATTGAAAAAGTCTTGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000
.......................................TCCAGGAAACGGTAAGGACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GGCAACGAGTTCGTGCTGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................ACCAACTTCCAGGAAACGGTAAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CAACGAGTTCGTGCTGCA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGCTGCACGTACTCAACT...................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AACGAGTTCGTGCTGCAGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATATTTCCATT--TATCCT---TCT.....................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................CAGTGCGACACCAACTTCCAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
...............................CACCAACTTCCAGGAAACGGTAAGGAC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TA--------------CATCTATATTTCCATT--TATCCT---TCT.....................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGGATGTCACACTACTGCTG................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................TCCAGGAAACGGTAAGGA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AA--A-GA-CCTTGAATTT----GGGT.................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....GGCAACGAGTTCGTGCTGCAGTGCGACA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................CACCAACTTCCAGGAAACGA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CACACTACTGCTGCACGTACTCAACTT..................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GCAACGAGTTCGTGCTGCAGTGCGAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000
........................AGTGCGACACCAACTTCCAGGAAAC........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.0010000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...ACGGCAACGAGTTCGTGCTGCAGTGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACTACTGCTGCACGTACTCAACTTT.................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GAGTTCGTGCTGCAGTGCGA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACACTACTGCTGCACGTACT........................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTACTGCTGCACGTACT........................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............GTTCGTGCTGCAGTGCGACACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........AACGAGTTCGTGCTGCAGTGCGACACC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000
.........ACGAGTTCGTGCTGCAGTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGAATTTGCTCTTATTC..............................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.CAACGGCAACGAGTTCGTGCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
TCAATGGCAACGAGTTCGTGCTGCAGTGCGACACCAACTTTCAGGAAACGGTAAGGACAA---------------------------CGGTTAGTTTTC-ACAGTGTAG--------------------------------------------------------------TACCTCTAAAAATGTTTCAAATTTCTCACGAATACCTTTTTTTTTCTCCAAATTTT---------------------------------------------------------TCCTATCGCTTTAAA---TTT---------------------TATTTCTGTAT---GGAATTCATCTTTGAAAAA-------------------------------------------------------------------------ACAATTT---GAGAAGTTCATCTTACTGCGATTCC---------------------------------------------------------------ATATTATTTTAGGATTTTAAATGGATAAGGAATAAAATGTATTAATTT--------AAA----------CCG----------ACATCGACCCCATAAAAATGAT----------------TATTTTTCTAAATATGTATAATAAAATG--TGTTTT---CCTCAGGATGTCACTCTGCTGTTGCACGTACTTAACTTCACCACTTTGCTGATCGASizeHit CountTotal NormTotal
No Reads
droBia1
TGAACGCCAACGAGTTCGTGCTGCAGTGCGACACCAATTTCCAGGAAACGGTAAGGACAT---------------------------CGTTTACTTTTCTACGGTGTATCCCCAAAAAAGTCCCAGAATTCCCTG---------------------------------------------------------------AAGGTTCCATCT---TGTGTTAAAGTTTCATCAATTAAATGTACAAAAATTCGCAAATCTATAAAGTTTTATGTATATACAAAAGATCC----------------------------------------------------------------------------------------------------------------TATCACAGAATT--------GGGC-----------------------------------------------------------------------------------------TTGAA-AAGTTGTTTTCGATATAATTCTGGGACTTCGAAA-CACAAG--ACAAACTGTGTTGTTCTTT------AAAAGATT-ATATTGGGTAT--CGCTACAC------CACCCATATGCTTTCTGTGA-AT-----TATTGTTG----TATATATTACTCTATT--TTTCCT---CCCCAGGATGTCACACTGCTGCTGCACGTACTTAACTTCACCACACTGCTGATTGASizeHit CountTotal NormTotal
No Reads
droTak1
TCAACGCCAACGAGTTCGTGCTGCAGTGCGACACCAATTTCCAGGAAACGGTGAGGATTAGCCCTAAAAGTTTCTATCTATGCAAAGAGTATGCAATACTATGGTTTATTCTCATAGATTTACCAGAATTTCCAGTATTAGTAACTAAAATCCATTTCAAATCTATTGTAGGAC--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CTGAAAGAGTAATTTTTTATATCGAATTCGATCTTATTCTGTGAATTTG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droEle1
TCAACGCCAACGAGTTCGTGCTGCAGTGCGACACCAACTTCCAGGAAACGGTAAGAACAA---------------------------CGGTTAGTTTTC-CAGGTTTTC-----------------------------------------------------------------CT-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droRho1
TCAACGCCAACGAGTTCGTGCTGCAGTGCGACACCAACTTCCAGGAAACGGTAAGGACAA---------------------------CGGTTAGTTTCC-CCGGTTTAC-----------------------------------------------------------------C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SizeHit CountTotal NormTotal
No Reads
droFic1
TCAACGCCAATGAGTTCGTGCTGCAGTGCGACACCAATTTCCAGGAAACGGTAAATAAAT---------------------------C-----------------------------------------------------------------------------------------------------------------------ATTTTCTATGTCCA----TA---------------------------------------------------------CCCTAT-GCTTTAAG---CTGGAAGAATTATACGGAACTAGTGAATTCTGTAA---AGAC----AATATA-------------------------------------CCAAGAAGTATTGCAG------------------------AACTATTT---GT---------A---ATG--------ATAAAACCCTACAGATG--GTTTACGTTGCTTCTGAAGAAGTTGTTATTCAAGTCGAAATTGATCCTGTTCTAGGAACGTGAAG-CCTAAA--CCGA-CCTTTTAGGTCTTA------AAACAATAGATATCGGATAAAGCGCTACGG--------------GGGAACCTGTGCAATACACTGATTTTCT-A-ATATCTA-AATACCATT--TAT-CT---CAACAGGACGTCACACTGCTGCTGCACGTACTTAACTTCACCACACTGCTGATCGASizeHit CountTotal NormTotal
No Reads
droKik1
TTGATTCTATCA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C--TATGAT---TTCTAGGATGTCACTTTGCTGCTGCATGTCCTCAATTTCACCACACTGCTGATCGASizeHit CountTotal NormTotal
No Reads
droAna3
CCATT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCCTT---CCCCAGGACGTCACTCTGCTGCTGCACGTGCTGAACTTCACCACCCTGCTGATAGASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTTCACCACCCTGCTGATAGA2411.001100000
droBip1
TATCCTG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A---TTCAAGGATGTCACATTGCTGCTGCACGTGCTCAACTTCACCACACTGCTGATAGASizeHit CountTotal NormTotal
No Reads
dp5
AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCCTTA----TATC---CCGCAGGACGTTACACTGCTGCTGCATGTACTCAACTTTACGACACTCCTGATCGASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTTACGACACTCCTGATC..2011.0010100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTTTACGACACTCCTGATCGA2411.0010100000000
droPer2
AA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGCCTTA----TATC---CCGCAGGACGTTACACTGCTGCTGCATGTGCTCAACTTTACGACACTCCTGATCGASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTTTACGACACTCCTGATCG.2314.004400000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTTTACGACACTCCT......1813.003300000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACTTTACGACACTCCTGATCG.2211.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACTTTACGACACTCCTGATCGA2411.001100000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACGACACTCCTGATCG.1811.001100000
droWil2
AATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GA---------------------------------------------------ATATG--------------CTTTAATGTTTTTAAC----TTGT---TTGTAGGATGTCACTCTATTGCTTCATGTACTGAACTTTACCACATTGCTCATTGASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTATTGCTTCATGTACTG.......................1911.00100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTCACTCTATTGCTTCATGTACTGAAC....................2811.00101000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAAC----TTGT---TTGTAGGATGTCACTCTAT.....................................2711.00101000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACTGAACTTTACCACATTGCTCATTG.2711.00101000
droVir3
CAATTTTAA------------------------------------------------------------------------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTTTCCAATT--TTTCTT---TAACAGGATGTTACCCTGCTGCTGCACGTACTCAATTTCACAACTCTGCTGATTGASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCAATTTCACAACTCTGCTGATT..2412.002000000000000001000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCCTGCTGCTGCACGTACTCAATTT..................2711.001000000000000000000000000000001000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCCTGCTGCTGCACGTA..........................1911.001000000000000000000000010000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTTACCCTGCTGCTGCAC.............................2011.001000000000000000000000000000000010000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTACCCTGCTGCTGCACGTAC.........................2311.001000000000000000000000000000001000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACCCTGCTGCTGCACGT...........................1911.001000000000000000000100000000000000000000000000000000000000000000
droMoj3
ATATTGATATAAATTTGA---------------------------------------------------------------------------T----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTCCCATT--GTCCTTCTCTCACAGGATGTTACTTTGCTACTGCACGTACTCAATTTCACAACATTGCTCATCGASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTACTTTGCTACTGCACGTACT........................2411.001100000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTTCACAACATTGCTCATCG.2311.001100000
droGri2
CCAAAAAT---------GTGCCAAAATGT-----C----------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATCTTTCTTA-----------------------------------------------------------------------------------------------------------------TTGTTATCCTTTCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T------------------------------------TCTGTCTTTCGTTGTCTCTTTT---ATTCAGGATGTGACCCTGCTGCTGCACGTACTCAATTTTACAACACTGCTCATTGASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
No Reads

Generated: 05/17/2015 at 10:20 PM