ID:

der_392

 Coordinate:

scaffold_4690:7074613-7074763 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-1.3 -0.9 -0.9 -0.8

Flybase annnotation

CDS [Dere\GG19084-cds]; exon [dere_GLEANR_3861:4]; intron [Dere\GG19084-in]

Repeatable elements

NameClassFamilyStrand
(CAA)nSimple_repeatSimple_repeat+

Sense Strand Reads

---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------##################################################
CCAAAAGCACAGAGGCAACCATAACAACAATTGCACCACCAGGATTAGCAACAACAATAAGCACCAGCACAACAACAATAAGAACAACAACAGCAACAAGCGAAACAAAACAACCACCAACAGCAATAACAACAAGAACAACAAACACTAGCAGAACAGATAGCAATCCCAGCCCCACACCTAAAACATTTCATTCAACAGATGATGAGCAGCAACAGGAACCGGAAACGGAAACGACCAACATTGGCAAC
**************************************************.................................................................................................((..................................................))************************************************** 		Read size # Mismatch Hit Count Total Norm Total V108
head
 M057
embryo
 V040
embryo
 M055
female body
....................................................................................................................................................................................................AACAGATGATGAGCAGCAAC................................... 20 0 1 1.00 1 1 0 0 0
...............................................................................................................................................................................................................AGCAGCAACAGGAACCGGAAA....................... 21 0 1 1.00 1 1 0 0 0
.....................................................................................................................................................................................................................AACAGGAACCGGAAACGGAAACG............... 23 0 1 1.00 1 1 0 0 0
...................................................................................................................................................................................................CAACAGATGATGAGCAGC...................................... 18 0 1 1.00 1 1 0 0 0
...................................................................................ACAACAACAGCAACAAGCGAAAC................................................................................................................................................. 23 0 1 1.00 1 0 1 0 0
......................................................................................................CAACAAAACAACCACCGACAGT............................................................................................................................... 22 3 2 0.50 1 0 0 1 0
........................................................................................................................................................................................................................AGGAACCGGAAACGGAAAC................ 19 0 2 0.50 1 1 0 0 0
.......................................................................................................CACAAGACAACCACCAACA................................................................................................................................. 19 2 9 0.11 1 0 0 1 0
..................................................ACAACAACAAGCACCAGC....................................................................................................................................................................................... 18 1 10 0.10 1 1 0 0 0
...............................................................................................................................................................................................................AGGAGCAATAGAAACCGGAA........................ 20 3 20 0.05 1 0 0 0 1

Anti-sense strand reads

GGTTTTCGTGTCTCCGTTGGTATTGTTGTTAACGTGGTGGTCCTAATCGTTGTTGTTATTCGTGGTCGTGTTGTTGTTATTCTTGTTGTTGTCGTTGTTCGCTTTGTTTTGTTGGTGGTTGTCGTTATTGTTGTTCTTGTTGTTTGTGATCGTCTTGTCTATCGTTAGGGTCGGGGTGTGGATTTTGTAAAGTAAGTTGTCTACTACTCGTCGTTGTCCTTGGCCTTTGCCTTTGCTGGTTGTAACCGTTG
**************************************************.................................................................................................((..................................................))************************************************** 		Read size # Mismatch Hit Count Total Norm Total GSM1528801
follicle cells		 M055
female body
 V107
male body
..............................................................................................................................TGTGTTGTTCTTGTCGTTTGTGAT..................................................................................................... 24 3 2 6.00 12 12 0 0
........................................................................................................................................................................................................................................TTGCTGGTTGGAATCGTT. 18 2 2 0.50 1 0 1 0
..............................................................................................................................................................................GGTGTGAATTTTGTAAA............................................................ 17 1 9 0.11 1 1 0 0
.......................................................................................................................................................................................................................................GGTGCTGGTTGGAACCGTT. 19 3 20 0.05 1 0 0 1
........................................................................................................................................................................................................................................TTGCTGGTTGGAATCGTTT 19 3 20 0.05 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4690:7074563-7074813 + der_392 CCAAAAGCA--------------------------------------------CAG---------------------------AGGCAACCATAAC------------------------------------------------------------------AACAATTGCACCACCAGGATTAGCAACAACAATAAGCACCAGCACAACAACAATA------------AG------AACAA---------CAAC-----------------------------------------------------------------------------------AG------CAACAAGCGAAACAAAACAACCACCAACAGCAATAACAACA------------A----------------------------------------------------------------GAACAACAAACACTAGCAGAACAGATAGCAATCCCAGCCCCACACCTAAAAC---ATTTCATTCAACAGATGATGAGC---AGCAACAGGAA-------------------------------------------------------------------------------CCGGAAACGGA--------------------AACGACCAACATTGGCAAC
droYak3 X:15323311-15323579 + dya_1435 CAACAAGCA--------------------------------------------CAG---------------------------AGGCAACCATAAC------------------------------------------------------------------AACAATTGCACCATCAGGATTAGCAACCACAATAAGCACCAGCACAACAACAATA------------GC------AGCAG---------CAAC-----------------------------------------------------------------------------------AA------CAATAAGTGCAACACAACAACCACCACCAACAACAACAACAACAACAAGAACAA----------------------------------------------------------------CAACAACAACCACTAGCAGAACAGATAGCAATCCCAGCCCCACACCTAAAAC---ATTTCATTCAACAGATGATGAGC---AGCAACAGGAA-------------------------------------------------------------------------------CCGGAAACGGA--------------ACCGAAAACGAACAACATTGGCAAC
droSec2 scaffold_17:546004-546248 + dse_901 CAATAAGCA--------------------------------------------CAG---------------------------AGGCAACCATACC------------------------------------------------------------------AACAATTGCACCATCAGGATTAGCAACAACAATAAGCACCAGCACAACAACAATA------------G--------------------------------------------------------------------------------------------------------------------CAACAAGTGCAACACAACAACCACCAACAGCAACAACAACAACAACA------A----------------------------------------------------------------GAACAACAACCACTAGCAGAACAGATAGCAATCCCAGCCCCACACCTAAAAC---ATTTCATTTAACAGATGATGAGC---AGCAACAGGAA-------------------------------------------------------------------------------CCGGAAACGGA--------------------AACGGACAACATTGGCAAC
droSim2 x:15819416-15819669 + CAATAAGCA--------------------------------------------CAG---------------------------AGGCAACCATACC------------------------------------------------------------------AACAATTGCACCATCAGGATTAGCAACAACAATAAGCACCAGCACAACAACAATA------------G---------CAA---------CAAT-----------------------------------------------------------------------------------AG------CAACAAGTGCAACACAACAACCACCAACAGCAACAACAACAACAACA------A----------------------------------------------------------------GAACAACAACCACTAGCAGAACAGATAGCAATCCCAGCCCCACACCTAAAAC---ATTTCATTTAACAGATGATGAGC---AGCAACGGGAA-------------------------------------------------------------------------------CCGGAAACGGA--------------------AACGGACAACATTGGCAAC
dm3 chrX:16717689-16717939 + CAATAAGCA--------------------------------------------CAG---------------------------AGGCAACCATAAC------------------------------------------------------------------AACAATTGCACCATCAGGATTAGCAACAACAATAAGCACCAGCACAACAACAATA------------G--------------------------------------------------------------------------------------------------------------------CAACAAGTGCAACACAACAACCACCAACAGCAACAACAACAACAACAGCAACCA----------------------------------------------------------------GAACAACAACCACTAGCAGAACAGATAGCAATCCCAGCCCCACACCTAAAAC---ATTTCATTTAACAGATGATGAGC---AGCAACAGGAA-------------------------------------------------------------------------------CCGGAAACGGA--------------------AACGGACAACATTGGCAAT
droEug1 scf7180000409631:95033-95271 + ACAA--ACAAACAAACAAACAAACAAACAAACAAACAAACAAACA--------AACAAACAACAACAACAA------------CAACAACAACAACAACAACAACAAC---------AACAA------CAACAACA---A---CAACAACAACA------ACAACAACAACA---------------------------------------ACAA------------------------CAA------------------------CAACAACA-----------ACAACAACAA-C---A---------------AC--------------------AACAACAA---------------------------------------CAACAACAA----------------------------------------------------------------------CA----------------------ACAACAACA--------------------------------AC--------AACAACAACAACAACAACAACAACAA--------------------------------------------CAACAACAACAACAA---------------------------------------------CAACAACAACAACAAC
droBia1 scf7180000298389:1471402-1471664 - CCACAACAG--------------------------------------------CGG---------------------------CAACACCAGCAGCAGCAACAG------------------------------CAGA------------------------AACAACAGCAACATCAGCCACAGCAGCAGC------------AATAGCAACAAAA------------GCAACAAAAGCAA---------CAACAG---------CA---------------------------GC---A---ACA---GCAGCAACAACAGC--AGCAACAGCACCAGCAACAA---------------------------------------------------------------------CAGCAACTACACCAGCGA----------------CAACAGCAA------CTACAC----------------------CAGCAACAAC-----------AGC---A-----------------------ACTACACCAGCAACAGCA---A--------------------------------------------CATCAGTCACAGCAGCAACATTGGGCCCAAAAAGCGA--------------------CACTGGCAGCAGCAGCAGC
droTak1 scf7180000415809:695654-695942 - CAACAAGTT--------------------------------------------GTAATGCATCACCAGCAGCATCAAGTGCAGCAGGTTCATTATCAGCAG---------------------------CAGCCGGA---T---CCCCAGCAGCAGCAGCAACAGCAATTGCAC---------------------------------------------------------------------------------------------------------------------------C---TGGAGC---------AACA--------------------------------------------------GCAACAGCAACAATATGTGCAACA---------------------------CCAGCAGCAACAACCCGCCATCCAGCACA-CGCAACAG----ATTTACTACACTTCCGAGCAGGTT---CTGCAG-CCCAATGCCA-TTGTACAGC---ATATGCAGCAACAGA-----AGAAGCAGCAGCAAGTGTTGCAGCAA--------------------------------------------CAACAGCAGCAGCAA---------------------------------------------CAGCAGTATCAGCAGC
droEle1 scf7180000491006:114772-115004 - TAGTGA--A--------------------------------------CAG---GAG---CAACAACAATAGCAACAACAGCAGCATCAACAACAACAGCAG---------------------------CAGCAGGA---G---CAACAACATGA------GCAACAACTGCAC------------------------------------------------------------------------------CAGCAG---------GA---------------------------GC---AACAACA---------TCA-----GCAACAACAGCAGCAACAACA------------------------------------------------------TGAGC---AACAACAGCAGCAACAACAGCAGCAA----------------CAACAG------------CAG----------------------CAACA--------------------------------AC--------ATGAGCAACAACAGCAGCAACAACAT--------------------------------------------GAACAACAACAGCAG---------------------------------------------CAACAACATGGGCAAC
droRho1 scf7180000766112:37728-37975 + CCAA--ACG--------------------------------------------CAG---------------------------CCGCAGCAACAAC------------------------------------------------------------------ATCAGCAACAACAACAGCAGCAGCAGCAACAACAACAACAGCAACAACAACAACA------------G---------CAG---------CAAC---------AACAACAGCA-----------GCAACAACAA-C---A---------------GC--------------------AGCAGCAA---------------------------------------CAACAACAACAGCAG------------------CAGCAACAACAG-------------------------------------CAGCAAATGCAA--------------------------------------------------------------A---TGCAACAGCAGCAGGT---GAATGCGGTACAAACAACAAGTGTTCCATTGGGCAGTGGTGGCAAC--CTGCAACAACTC---------------------------------------------AATCAGCAGCAGCAAC
droFic1 scf7180000454077:1466102-1466394 - CAACAAGCA--------------------------------------------CAA---------------------------CAGATATTGCAAGTAGCT---CAGCACAACCACCACCACCGG---CAACAGCAAC------------------------AACAATTGCACCATCAGCAACAGCAACAACAATTAGCACCACCACCAC--------------------------------------------------------------------CTCCTCCACAACAACAA-C---A---------------AC--------------------AA------CAACAAGT---ACACAACAACCACCAACAACAACAACAACAACAA-------------------------------------------------------------------------------------CAAGCAGAACAGAAAGCAATCCCAGTCCCACACTTAAAAC---ATTTCATTTAACAGAT---GAGC---AGCAACAGGAA-------------------------------------------------------------------------------ACGGAAACGGAAACGGCAAA--TCAACCAGAAACGGATGGCATTGGCAAC
droKik1 scf7180000301542:244516-244817 - CAGAGGCAA---------------------------------CCT--CAGTAGCAG---------------------------CAGTAATTGCAACAACAT---CAGC---------AACAGTCGCCGCAGCAGCAGCAACTATTGAAACTTCA------ACAACAATTGCACC------------AACAACAATTAGCACCAGCACAACAACAACA------------A---------------------------------------------------------------------------------------T--------------------AGCAACAACAACAACT---ACACCACCAC---------------------------------------------------CACCACCACCACC-------------------ACCAATAGCAACAACAACAACAACAACAAGCAGAACAAATAGCAATCCCAGTTCCACACTTAAAAC---ATTTACTTCAACAGAT---GAGC---AGCAACAGGAGCAGGATCAT--------------------------------------------GATCAGGAACG---A-------------------------------------G----G--AGGAAATATTGGTAAC
droAna3 scaffold_13117:3549904-3550139 - CAGCAGTAA--------------------------------------------CAG---------------------------TAGCAACAGCAACAACAA------------------------------------------------------------------CAGCAACAACAGCAGCAGCAACAACAACAACAGTAGCAGCAGCAACAACA------------AT---------AG------------TAGC---AATAACAACA-CACCAAACGGTGCACAACAACAA-C---A---------------GC--------------------AGCAACAA---------------------------------------CAACAACATCAGCAA------------------CATCAACAACAAC-------------------------------------AACAACAACAA---------A---------------------------------TACATCATCAAAGGATTGCAAGCAGCAGC---AA------C----------------------------------------------CAGCAGCAGCTGCAG---------------------------------------------CAACAACAGCAGCAGC
droBip1 scf7180000396362:640468-640747 + CAAAAATTA--------------------------------------------CAA---------------------------CAACAGCAACAACAAAAAATGGAACAACAACAAGAACAACAA------------------------------------------GAACAACAACAAAAATTACAACAACAACAAGAA---G---------------------------------AACAACAACAACAACAACAAG------AACAA---------CAAAATTACAACAACAA-C---AAGAAC---------AACA-----------------------------------------------------------------AGAACAACAACAAAAA----------------------------------------------------------------TTACAACAACAACAAGAAGAACAA-CAACAACAACAACAACAAAATTACAACAAAATTACAACA-AC--------AAGAAGAAGAACAACAACAACAACAA--------------------------------------------CAACAACAACAACAA---------------------------------------------GAACAACAACAACAAC
dp5 XR_group6:12702007-12702247 + CAGAAGCAG--------------------------------------------CAG---------------------------CAGCAACAGCAGCAACAG------------------------------------------------------------------CAGCAGCAGCAGAAGCAGCAGCAGCAACAGCAGCAACAGCAGCAGCAACA------------GCA------GCAG---------CAGCAA---------CA---------------------------GCAACAACAGCA---GCAGCAACAGCAGC--------------AGCAA------------------------------------------CA------------G---CAGCAGCAACAGCAGCAGCAACAGCAGCAG----------------CAGCATCAG------CAACAT----------------------C-----------AGCAGCAAAAGC---A-----------------------TCAGCAACAGCAGCAGCAGCAG--------------------------------------------CAGCATAAGCAGCAG---------------------------------------------CAACAGCATCAGCAAC
droPer2 scaffold_77:81172-81403 + CAACACCAA--------------------------------------------CAG---------------------------CAACAACAACAACAACAC------------------------------------------------------------------CAGCAACACCAACAACACCAACATCAGCTTCAACAACAGCATCAACAACA------------CC---------AA---CAG---CAACAG---------CA---------------------------GC---AGCAACA---------CCA-----ACAACACCAACAGCAGCAGCAA---------------------------------------CAGCAACACCACCAG------------------CACCAGCAACAGCTT----------------CATCAT------------CAT--------------------------------------------------------------CATCAGCAGC---AGCAACAGCAGCAGCA-----------------------------------------------------------ACAA---------------------------CGTGTTGCAAGCAGTAGCCTGCAACACCAGCAAC
droWil2 scf2_1100000004888:1009886-1010134 - CAGAG-GCA--------------------------------GTGAAGCAACAGCAA------CTGCAGCAGCAACAACAACAGCAGCAACAACAACAGCAG------------------------------------------------------------------CAGCA---------------------------------ACAACAGCAACAGCAACAACAACAGCA------GCAG---------CAACAACAAC---AAC---------------------------------AGCAGCA---GCAACAACAACAGC--------------AGCAACA------------------------------------------------------A---CAGCAGCAGCAGCAACAGCAACAACAGCAG----------------CAGCAACAA------CAACAG----------------------CAGCA--------------------------------AC--------AACAACAGCAGCAGCAGCAACAGCAA--------------------------------------------CAACAGCAGCAGCAA---------------------------------------------CAACAACAGCAGCAAC
droVir3 scaffold_12928:1184181-1184427 + CAACAGCAA--------------------------------------------CAG---------------------------CAACATTAACAGCAGCAGCAG---------------------------------------------------------------CAGCAACATTAACAGCAACAATAACAGCAACAGC---AACAACAACAACAGCA---------GC------AGCAG---------CAATAG---------CG---------------------------GC---AACAGCA---------GCA----------------------------------------------A-CAACAATAGCAATAA---CAACAACACCAACAG---------CAACAGCAACAGCAACAATAA----------------------------------------------------TAAT-AATAGCAATAACAAC--AACACCAATAAC---A-----------------------ATAATAATAATAATAGCAATAA--------------------------------------------CAACAACAACAACAA---------------------------------------------CAACAACAACAGCAAC
droMoj3 scaffold_6473:12294318-12294534 - CAACAGCAA--------------------------------------------CAG---------------------------CAGCAACAACAACAATA---------------------------------------------------------------------ACAACAACAAGAACAGCAACAACAACAAGAACTGCAACAACAACAACA------------A---------CAA---------CAAC---------------------------------------------------A---G--------------CCACAACAGCAACAACAACA------------------------------------------------------ATAGC---AACCACAGCAACAACAACAACAACAA----------------CAACAA------------CAG----------CA------ATAGCAACA--------------------------------AC--------AGCAACAACAGCAACAACAACAACAA--------------------------------------------CAACAACAACGGTAA---------------------------------------------CAACAACAATAGCAAC
droGri2 scaffold_15203:1310346-1310586 - CAACAACTG--------------------------------------------CAA---------------------------CAACAACTGCAACAACAA------------------------------------------------------------------CTGCAACAACAAGAGCAACAACAACATCAACAACAACAGCAACAACAACA------------GC------AACAA---------CAACAG---------CA---------------------------AC---AACAACAGCAACAACAACA-----------------GCAACAACAA---------------------------------------CA------------G---CAACAACACCAACAATATCAACATCAAC-------------------AACAA----------------------CAGCACAAACAACAGCAACA--------------------------------AC--------AACTGCAACAACAAGAGCAGCAGCAA--------------------------------------------GAGCAACAACAACAT---------------------------------------------CAACAACAACAGCAAC

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
CCAAAAGCA--------------------------------------------CAG---------------------------AGGCAACCATAAC------------------------------------------------------------------AACAATTGCACCACCAGGATTAGCAACAACAATAAGCACCAGCACAACAACAATA------------AG------AACAA---------CAAC-----------------------------------------------------------------------------------AG------CAACAAGCGAAACAAAACAACCACCAACAGCAATAACAACA------------A----------------------------------------------------------------GAACAACAAACACTAGCAGAACAGATAGCAATCCCAGCCCCACACCTAAAAC---ATTTCATTCAACAGATGATGAGC---AGCAACAGGAA-------------------------------------------------------------------------------CCGGAAACGGA--------------------AACGACCAACATTGGCAACSizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGATGATGAGC---AGCAAC......................................................................................................................................2011.0010000010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---AGCAACAGGAA-------------------------------------------------------------------------------CCGGAAA...........................................2111.0010000010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGGAA-------------------------------------------------------------------------------CCGGAAACGGA--------------------AACG...............2311.0010000010
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGATGATGAGC---AGC.........................................................................................................................................1811.0010000010
..............................................................................................................................................................................................................................................ACAA---------CAAC-----------------------------------------------------------------------------------AG------CAACAAGCGAAAC......................................................................................................................................................................................................................................................................................................................................2311.0010100000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAA-------------------------------------------------------------------------------CCGGAAACGGA--------------------AAC................1920.5010000010
droYak3
CAACAAGCA--------------------------------------------CAG---------------------------AGGCAACCATAAC------------------------------------------------------------------AACAATTGCACCATCAGGATTAGCAACCACAATAAGCACCAGCACAACAACAATA------------GC------AGCAG---------CAAC-----------------------------------------------------------------------------------AA------CAATAAGTGCAACACAACAACCACCACCAACAACAACAACAACAACAAGAACAA----------------------------------------------------------------CAACAACAACCACTAGCAGAACAGATAGCAATCCCAGCCCCACACCTAAAAC---ATTTCATTCAACAGATGATGAGC---AGCAACAGGAA-------------------------------------------------------------------------------CCGGAAACGGA--------------ACCGAAAACGAACAACATTGGCAACSizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGGAA-------------------------------------------------------------------------------CCGGAAACGGA--------------.........................1911.00100000100000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGGAA-------------------------------------------------------------------------------CCGGAAACGGA--------------A........................2011.00100000010000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGAACAGATAGCAATCCC..........................................................................................................................................................................................2011.00110000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCAACAGATGATGAGC---AGC.........................................................................................................................................2011.00100000010000
.......................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAACAACAACAAGAACAA----------------------------------------------------------------C............................................................................................................................................................................................................................2630.33100100000000
.....................................................................................................................................................................................................................................................................................................................................................................................................AACAAGAACAA----------------------------------------------------------------CAACAACAAC...................................................................................................................................................................................................................21150.07101000000000
..........................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAACAACAAGA.................................................................................................................................................................................................................................................................................................18200.05101000000000
droSec2
CAATAAGCA--------------------------------------------CAG---------------------------AGGCAACCATACC------------------------------------------------------------------AACAATTGCACCATCAGGATTAGCAACAACAATAAGCACCAGCACAACAACAATA------------G--------------------------------------------------------------------------------------------------------------------CAACAAGTGCAACACAACAACCACCAACAGCAACAACAACAACAACA------A----------------------------------------------------------------GAACAACAACCACTAGCAGAACAGATAGCAATCCCAGCCCCACACCTAAAAC---ATTTCATTTAACAGATGATGAGC---AGCAACAGGAA-------------------------------------------------------------------------------CCGGAAACGGA--------------------AACGGACAACATTGGCAACSizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGGAA-------------------------------------------------------------------------------CCGGAAACGGA--------------------AACGGA.............2611.0010100
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGGAA-------------------------------------------------------------------------------CCGGAAACGGA--------------------C..................1930.3310010
.............................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAACA------A----------------------------------------------------------------GAACA........................................................................................................................................................................................................................18190.0510010
...................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAACAACAAC........................................................................................................................................................................................................................................................................................................18200.0510001
droSim2
CAATAAGCA--------------------------------------------CAG---------------------------AGGCAACCATACC------------------------------------------------------------------AACAATTGCACCATCAGGATTAGCAACAACAATAAGCACCAGCACAACAACAATA------------G---------CAA---------CAAT-----------------------------------------------------------------------------------AG------CAACAAGTGCAACACAACAACCACCAACAGCAACAACAACAACAACA------A----------------------------------------------------------------GAACAACAACCACTAGCAGAACAGATAGCAATCCCAGCCCCACACCTAAAAC---ATTTCATTTAACAGATGATGAGC---AGCAACGGGAA-------------------------------------------------------------------------------CCGGAAACGGA--------------------AACGGACAACATTGGCAACSizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
No Reads
dm3
CAATAAGCA--------------------------------------------CAG---------------------------AGGCAACCATAAC------------------------------------------------------------------AACAATTGCACCATCAGGATTAGCAACAACAATAAGCACCAGCACAACAACAATA------------G--------------------------------------------------------------------------------------------------------------------CAACAAGTGCAACACAACAACCACCAACAGCAACAACAACAACAACAGCAACCA----------------------------------------------------------------GAACAACAACCACTAGCAGAACAGATAGCAATCCCAGCCCCACACCTAAAAC---ATTTCATTTAACAGATGATGAGC---AGCAACAGGAA-------------------------------------------------------------------------------CCGGAAACGGA--------------------AACGGACAACATTGGCAATSizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGACAACATTGGCA..15116.001600000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000016
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GC---AGCAACAGGAA-------------------------------------------------------------------------------CCGGAAA...........................................20111.00110000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000009000000000000000000000000000000000000000000000000000000000000000000000000000000020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAACAGATGATGAGC---AGCAACAGGA..................................................................................................................................2713.0030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000030000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTAACAGATGATGAGC---A...........................................................................................................................................1812.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTAACAGATGATGAGC---AGC.........................................................................................................................................2112.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
.............................................................................................................................................................................CATCAGGATTAGCAACAACAATAAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2612.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000010000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAA-------------------------------------------------------------------------------CCGGAAACGGA--------------------AACGGA.............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................ACCATCAGGATTAGCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCCCAGCCCCACACCTAA............................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................................CCA----------------------------------------------------------------GAACAACAACCACTAGCAGAACAGATG..................................................................................................................................................................................................3011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACCACTAGCAGAACA......................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................CAACAATA------------G--------------------------------------------------------------------------------------------------------------------CAACAAGTGCAACACA...................................................................................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................AACCACCAACAGCAACAACAACAACA.......................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATGAGC---AGCAACAGGA..................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
.....................................................................................................................................................................................................................AATA------------G--------------------------------------------------------------------------------------------------------------------CAACAAGTGCAACAC....................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAGATGATGAGC---AGCAACAGG...................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010
................................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAGCAACCA----------------------------------------------------------------GAACA........................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................................................................................................................................GCACCATCAGGATTAGCAACAACA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................CATCAGGATTAGCAACAAC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCGGAAACGGA--------------------AACGGACAA..........2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATTTAACAGATGATGAGC---A...........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGAGC---AGCAACAGGAA-------------------------------------------------------------------------------CCGGAAACGGA--------------------...................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGGAA-------------------------------------------------------------------------------CCGGAAACGG........................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGATGATGAGC---AGCAACAGGAA-------------------------------------------------------------------------------CC................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATTTAACAGATGATGAGC---AG..........................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAA-------------------------------------------------------------------------------CCGGAAACGGA--------------------AAC................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGGAA-------------------------------------------------------------------------------CCGGAAACGGA--------------------AACGGACA...........2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000
..............................................................................................................................................................................ATCAGGATTAGCAACAACAATAAGCA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000
...................................................................................................................................................................ACAATTGCACCATCAGGATTA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAACAGATAGCAATCCCAGC.......................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
..........................................................................................................................................................................CACCATCAGGATTAGCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACCACTAGCAGAACAGATAG.................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAA-------------------------------------------------------------------------------CCGGAAACGGA--------------------AACGGAC............2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
..........................................................................................................................................................................................................AGCACAACAACAATA------------G--------------------------------------------------------------------------------------------------------------------CAAC...............................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAACAGATGATGAGC---AGC.........................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................................AGCAACCA----------------------------------------------------------------GAACAACAACCACTAGCAG..........................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......GCA--------------------------------------------CAG---------------------------AGGCAACCATAAC------------------------------------------------------------------AACA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTAACAGATGATGAGC---AGCAAC......................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGATGATGAGC---AGCAACA.....................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
.........................................................................................................................................................................GCACCATCAGGATTAGCAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACCACTAGCAGAACAGATAGCA...............................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................CCACCAACAGCAACAACA.............................................................................................................................................................................................................................................................................................................1880.3830000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000200001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAACAACAACA....................................................................................................................................................................................................................................................................................................18200.2040000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000400000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................ACAACAACAACAGCAACCA----------------------------------------------------------------GT...........................................................................................................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................ACCAACAGCAACAACAACAAC........................................................................................................................................................................................................................................................................................................2170.1410000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................CCAACAGCAACAACAACAACA.......................................................................................................................................................................................................................................................................................................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAGCAACCA----------------------------------------------------------------GAG..........................................................................................................................................................................................................................2180.1310000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACAACAACAACAACA....................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAACAACAACAA......................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................................................................................................................CAACAACAACAACAACAGCA.................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................GCAACAACAACAACAACAGCA.................................................................................................................................................................................................................................................................................................21200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAACAACAACAACA....................................................................................................................................................................................................................................................................................................23200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACAACAACAACAA......................................................................................................................................................................................................................................................................................................19200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................ACAGCAACAACAACAACA.......................................................................................................................................................................................................................................................................................................18200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAACAACAACA.......................................................................................................................................................................................................................................................................................................20200.0510000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
droEug1
ACAA--ACAAACAAACAAACAAACAAACAAACAAACAAACAAACA--------AACAAACAACAACAACAA------------CAACAACAACAACAACAACAACAAC---------AACAA------CAACAACA---A---CAACAACAACA------ACAACAACAACA---------------------------------------ACAA------------------------CAA------------------------CAACAACA-----------ACAACAACAA-C---A---------------AC--------------------AACAACAA---------------------------------------CAACAACAA----------------------------------------------------------------------CA----------------------ACAACAACA--------------------------------AC--------AACAACAACAACAACAACAACAACAA--------------------------------------------CAACAACAACAACAA---------------------------------------------CAACAACAACAACAACSizeHit CountTotal NormTotal
No Reads
droBia1
CCACAACAG--------------------------------------------CGG---------------------------CAACACCAGCAGCAGCAACAG------------------------------CAGA------------------------AACAACAGCAACATCAGCCACAGCAGCAGC------------AATAGCAACAAAA------------GCAACAAAAGCAA---------CAACAG---------CA---------------------------GC---A---ACA---GCAGCAACAACAGC--AGCAACAGCACCAGCAACAA---------------------------------------------------------------------CAGCAACTACACCAGCGA----------------CAACAGCAA------CTACAC----------------------CAGCAACAAC-----------AGC---A-----------------------ACTACACCAGCAACAGCA---A--------------------------------------------CATCAGTCACAGCAGCAACATTGGGCCCAAAAAGCGA--------------------CACTGGCAGCAGCAGCAGCSizeHit CountTotal NormTotal
No Reads
droTak1
CAACAAGTT--------------------------------------------GTAATGCATCACCAGCAGCATCAAGTGCAGCAGGTTCATTATCAGCAG---------------------------CAGCCGGA---T---CCCCAGCAGCAGCAGCAACAGCAATTGCAC---------------------------------------------------------------------------------------------------------------------------C---TGGAGC---------AACA--------------------------------------------------GCAACAGCAACAATATGTGCAACA---------------------------CCAGCAGCAACAACCCGCCATCCAGCACA-CGCAACAG----ATTTACTACACTTCCGAGCAGGTT---CTGCAG-CCCAATGCCA-TTGTACAGC---ATATGCAGCAACAGA-----AGAAGCAGCAGCAAGTGTTGCAGCAA--------------------------------------------CAACAGCAGCAGCAA---------------------------------------------CAGCAGTATCAGCAGCSizeHit CountTotal NormTotal
No Reads
droEle1
TAGTGA--A--------------------------------------CAG---GAG---CAACAACAATAGCAACAACAGCAGCATCAACAACAACAGCAG---------------------------CAGCAGGA---G---CAACAACATGA------GCAACAACTGCAC------------------------------------------------------------------------------CAGCAG---------GA---------------------------GC---AACAACA---------TCA-----GCAACAACAGCAGCAACAACA------------------------------------------------------TGAGC---AACAACAGCAGCAACAACAGCAGCAA----------------CAACAG------------CAG----------------------CAACA--------------------------------AC--------ATGAGCAACAACAGCAGCAACAACAT--------------------------------------------GAACAACAACAGCAG---------------------------------------------CAACAACATGGGCAACSizeHit CountTotal NormTotal
No Reads
droRho1
CCAA--ACG--------------------------------------------CAG---------------------------CCGCAGCAACAAC------------------------------------------------------------------ATCAGCAACAACAACAGCAGCAGCAGCAACAACAACAACAGCAACAACAACAACA------------G---------CAG---------CAAC---------AACAACAGCA-----------GCAACAACAA-C---A---------------GC--------------------AGCAGCAA---------------------------------------CAACAACAACAGCAG------------------CAGCAACAACAG-------------------------------------CAGCAAATGCAA--------------------------------------------------------------A---TGCAACAGCAGCAGGT---GAATGCGGTACAAACAACAAGTGTTCCATTGGGCAGTGGTGGCAAC--CTGCAACAACTC---------------------------------------------AATCAGCAGCAGCAACSizeHit CountTotal NormTotal
No Reads
droFic1
CAACAAGCA--------------------------------------------CAA---------------------------CAGATATTGCAAGTAGCT---CAGCACAACCACCACCACCGG---CAACAGCAAC------------------------AACAATTGCACCATCAGCAACAGCAACAACAATTAGCACCACCACCAC--------------------------------------------------------------------CTCCTCCACAACAACAA-C---A---------------AC--------------------AA------CAACAAGT---ACACAACAACCACCAACAACAACAACAACAACAA-------------------------------------------------------------------------------------CAAGCAGAACAGAAAGCAATCCCAGTCCCACACTTAAAAC---ATTTCATTTAACAGAT---GAGC---AGCAACAGGAA-------------------------------------------------------------------------------ACGGAAACGGAAACGGCAAA--TCAACCAGAAACGGATGGCATTGGCAACSizeHit CountTotal NormTotal
No Reads
droKik1
CAGAGGCAA---------------------------------CCT--CAGTAGCAG---------------------------CAGTAATTGCAACAACAT---CAGC---------AACAGTCGCCGCAGCAGCAGCAACTATTGAAACTTCA------ACAACAATTGCACC------------AACAACAATTAGCACCAGCACAACAACAACA------------A---------------------------------------------------------------------------------------T--------------------AGCAACAACAACAACT---ACACCACCAC---------------------------------------------------CACCACCACCACC-------------------ACCAATAGCAACAACAACAACAACAACAAGCAGAACAAATAGCAATCCCAGTTCCACACTTAAAAC---ATTTACTTCAACAGAT---GAGC---AGCAACAGGAGCAGGATCAT--------------------------------------------GATCAGGAACG---A-------------------------------------G----G--AGGAAATATTGGTAACSizeHit CountTotal NormTotal
No Reads
droAna3
CAGCAGTAA--------------------------------------------CAG---------------------------TAGCAACAGCAACAACAA------------------------------------------------------------------CAGCAACAACAGCAGCAGCAACAACAACAACAGTAGCAGCAGCAACAACA------------AT---------AG------------TAGC---AATAACAACA-CACCAAACGGTGCACAACAACAA-C---A---------------GC--------------------AGCAACAA---------------------------------------CAACAACATCAGCAA------------------CATCAACAACAAC-------------------------------------AACAACAACAA---------A---------------------------------TACATCATCAAAGGATTGCAAGCAGCAGC---AA------C----------------------------------------------CAGCAGCAGCTGCAG---------------------------------------------CAACAACAGCAGCAGCSizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAAC-------------------------------------AACAACAACAA---------A---------------------------------TACAT..............................................................................................................................................................2711.001010000
..............................................................................................................................................................................................................................................................TAGC---AATAACAACA-CACCAAACGGT..................................................................................................................................................................................................................................................................................................................................................................................................................2511.001010000
.......AA--------------------------------------------CAG---------------------------TAGCAACAGCAACAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2111.001010000
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATCAAAGGATTGCAAGC............................................................................................................................................2011.001001000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAAGGATTGCAAGCAGCAGC---AA------C----------------------------------------------C...........................................................................2611.001010000
...................................................................................................................................................................................CAGCAGCAACAACAACAACAGTAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2511.001100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGATTGCAAGCAGCAGC---AA------C----------------------------------------------C...........................................................................2211.001010000
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAAGCAGCAGC---AA------C----------------------------------------------CAGCAGCAGCT.................................................................2811.001000010
........................................................................................................................................................................................................................................................................................................................................................................................................ATCAGCAA------------------CATCAACAACAAC-------------------------------------.........................................................................................................................................................................................................................2121.002020000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCTGCAG---------------------------------------------CAACAACAGC......1820.501010000
..........................................................................................................................................................................................AACAACAACAACAGTAGCAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2420.501010000
.........................................................................................................................................................................GCAACAACAGCAGCAGCAACAACAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2630.331010000
..............................................................................................................................................................................................ACAACAACAGTAGCAGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2040.251010000
................................................................................................AACAA------------------------------------------------------------------CAGCAACAACAGCAGCAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2480.131010000
.............................................................................................................................................................................................................................................................................................ACAACAACAA-C---A---------------GC--------------------AGCAACAA---------------------------------------............................................................................................................................................................................................................................................................................................................22100.101010000
.........................................................................................CAGCAACAACAA------------------------------------------------------------------CAGCAACAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21100.101000100
...................................................................................................AA------------------------------------------------------------------CAGCAACAACAGCAGCAGCAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25120.081000001
..................................................................................................................................................................................................................................................................................................AACAA-C---A---------------GC--------------------AGCAACAA---------------------------------------CAACAAC.....................................................................................................................................................................................................................................................................................................24120.081001000
..........................................................................................................................................................................................AACAACAACAACAGTAGC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18140.071010000
...................................................................................................................................................................................................................................................................................................ACAA-C---A---------------GC--------------------AGCAACAA---------------------------------------CAACAAC.....................................................................................................................................................................................................................................................................................................23150.071100000
...............................................................................................................................................................................................................................................................................................AACAACAA-C---A---------------GC--------------------AGCAACAA---------------------------------------C...........................................................................................................................................................................................................................................................................................................21180.061100000
...................................................................................................AA------------------------------------------------------------------CAGCAACAACAGCAGCAGCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000001
.............................................................................................................................................................................................................................................................................................ACAACAACAA-C---A---------------GC--------------------AGCAACA....................................................................................................................................................................................................................................................................................................................................................21200.051010000
droBip1
CAAAAATTA--------------------------------------------CAA---------------------------CAACAGCAACAACAAAAAATGGAACAACAACAAGAACAACAA------------------------------------------GAACAACAACAAAAATTACAACAACAACAAGAA---G---------------------------------AACAACAACAACAACAACAAG------AACAA---------CAAAATTACAACAACAA-C---AAGAAC---------AACA-----------------------------------------------------------------AGAACAACAACAAAAA----------------------------------------------------------------TTACAACAACAACAAGAAGAACAA-CAACAACAACAACAACAAAATTACAACAAAATTACAACA-AC--------AAGAAGAAGAACAACAACAACAACAA--------------------------------------------CAACAACAACAACAA---------------------------------------------GAACAACAACAACAACSizeHit CountTotal NormTotal
No Reads
dp5
CAGAAGCAG--------------------------------------------CAG---------------------------CAGCAACAGCAGCAACAG------------------------------------------------------------------CAGCAGCAGCAGAAGCAGCAGCAGCAACAGCAGCAACAGCAGCAGCAACA------------GCA------GCAG---------CAGCAA---------CA---------------------------GCAACAACAGCA---GCAGCAACAGCAGC--------------AGCAA------------------------------------------CA------------G---CAGCAGCAACAGCAGCAGCAACAGCAGCAG----------------CAGCATCAG------CAACAT----------------------C-----------AGCAGCAAAAGC---A-----------------------TCAGCAACAGCAGCAGCAGCAG--------------------------------------------CAGCATAAGCAGCAG---------------------------------------------CAACAGCATCAGCAACSizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
.........................................................................................................................................................................................................................................................................................................AACAACAGCA---GCAGCAACAGC............................................................................................................................................................................................................................................................................................................................................................................21200.1020200000000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAG----------------CAGCATCAG------CA...........................................................................................................................................................................................................................23120.0810100000000
....................................................................................................................................................................................................GCAGCAACAGCAGCAGCAACA------------GC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510010000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGC---A-----------------------TCAGCAACAGCAGCAGT.............................................................................................................................21200.0510000100000
..................................................................................................................................................................................................................................................................................................................................GC--------------AGCAA------------------------------------------CA------------G---CAGCAGCAACAGC.............................................................................................................................................................................................................................................................................23200.0510010000000
......................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGCAGCAACAGCAGCA.............................................................................................................................................................................................................................................................26200.0510001000000
........G--------------------------------------------CAG---------------------------CAGCAACAGCAGCAACAG------------------------------------------------------------------C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAGCAGCAG--------------------------------------------CA..........................................................................20200.0510000100000
........................................................................................................................................................................................GCAGCAGCAACAGCAGCAAC.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
............................................................................................................................................................................................................................................................AGCAA---------CA---------------------------GCAACAACAGCA---GC.....................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
........................................................................................................................................................................................................................................................................................................................AGCAACAGCAGC--------------AGCAA------------------------------------------CA------------G---CAGCAGC...................................................................................................................................................................................................................................................................................27200.0510000000001
..........................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAACAGCAGCA.............................................................................................................................................................................................................................................................22200.0510100000000
.................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAGCAG----------------CAGCA.......................................................................................................................................................................................................................................21200.0510000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAGCAG----------------CAGCATCA....................................................................................................................................................................................................................................20200.0510000001000
...........................................................................................................................................................................................................................................................................................................................AACAGCAGC--------------AGCAA------------------------------------------CA------------G---CAGCA.....................................................................................................................................................................................................................................................................................22200.0510100000000
...................................................................................................................................................................................................AGCAGCAACAGCAGCAGCAACA------------GC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510010000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAGCAG--------------------------------------------CAGCA.......................................................................22200.0510000100000
........................................................................................................................................................................................................................................................................................................CAACAACAGCA---GCAGCAACAGCAG..........................................................................................................................................................................................................................................................................................................................................................................24200.0510100000000
........................................................................................................................................................................................................................................................................................................................AGCAACAGCAGC--------------AGCAA------------------------------------------CA------------G---CAGC......................................................................................................................................................................................................................................................................................24200.0510000000001
......................................................................................................................................................................................................AGCAACAGCAGCAGCAACA------------GCA------GC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.0510000000001
..................................................................................................................................................................................................................................................................................................................................GC--------------AGCAA------------------------------------------CA------------G---CAGCAGCAACAGCAGCA.........................................................................................................................................................................................................................................................................27200.0510100000000
................................................................................................................................................................................................................................................................A---------CA---------------------------GCAACAACAGCA---GCAGCA.................................................................................................................................................................................................................................................................................................................................................................................21200.0510100000000
......................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAGC--------------AGCAA------------------------------------------CA------------G---C.........................................................................................................................................................................................................................................................................................23200.0510010000000
........................................................................................................................................................................................GCAGCAGCAACAGCAGCAACAGC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAGCAG--------------------------------------------CAG.........................................................................20200.0510000100000
.....................................................CAG---------------------------CAGCAACAGCAGCAACAG------------------------------------------------------------------CA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
........G--------------------------------------------CAG---------------------------CAGCAACAGCAGCAAC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
.................................................................................................................................................................................................................................................G---------CAGCAA---------CA---------------------------GCAACAACAGCA---GCA....................................................................................................................................................................................................................................................................................................................................................................................24200.0510000100000
.......................................................................................................................................................................................................GCAACAGCAGCAGCAACA------------GCA------GCAG---------C.................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510000000001
.......................................................................................................................................................................................................................CA------------GCA------GCAG---------CAGCAA---------CA---------------------------GC....................................................................................................................................................................................................................................................................................................................................................................................................19200.0510000100000
..................................................................................................................................................................................................................................................................................................................................................AGCAA------------------------------------------CA------------G---CAGCAGCAACAGCAGCAGC.......................................................................................................................................................................................................................................................................27200.0510000000001
.........................................................................................................................................................................................CAGCAGCAACAGCAGCAACA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000010000
......................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAGC--------------AGCAA------------------------------------------CA------------..............................................................................................................................................................................................................................................................................................21200.0510000100000
.....................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAGCAGCAACAGC.................................................................................................................................................................................................................................................................23200.0510010000000
.........................................................................................................................................................................................CAGCAGCAACAGCAGCAACAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.0510100000000
..................................................................................................................................................................................................................................................................................................................................GC--------------AGCAA------------------------------------------CA------------G---CAGCAGCAACA...............................................................................................................................................................................................................................................................................21200.0510000100000
..................................................................................................................................................................................................................................................................................................................A---GCAGCAACAGCAGC--------------AGCAA------------------------------------------CA------------G---C.........................................................................................................................................................................................................................................................................................24200.0510010000000
.........................................................................................................................................................................................................AACAGCAGCAGCAACA------------GCA------GCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAACAGCAGCAGCAGCAG--------------------------------------------CA..........................................................................21200.0510000100000
.....................................................................................................................................................................................................................................................................................................................................................AA------------------------------------------CA------------G---CAGCAGCAACAGCAGCA.........................................................................................................................................................................................................................................................................22200.0510100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAGCAACAGCAGC..............................................................................................................................................................................................................................................................24200.0510000000001
.......AG--------------------------------------------CAG---------------------------CAGCAACAGCAGCAACAG------------------------------------------------------------------CAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510100000000
......................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAGC--------------AGCAA------------------------------------------CA------------G---CAGCA.....................................................................................................................................................................................................................................................................................27200.0510100000000
............................................................................................................................................................................................................................................................................................................................ACAGCAGC--------------AGCAA------------------------------------------CA------------G---CAGC......................................................................................................................................................................................................................................................................................20200.0510100000000
...........................................................................................................................................................................................................................................................................A---------------------------GCAACAACAGCA---GCAGCAA................................................................................................................................................................................................................................................................................................................................................................................20200.0510000100000
.....................................................CAG---------------------------CAGCAACAGCAGCAACA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510000010000
................................................................................................................................................................................................................GCAGCAACA------------GCA------GCAG---------CAGCA.............................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
.........................................................................................................................................................................................................................................................................................................................GCAACAGCAGC--------------AGCAA------------------------------------------CA------------G---CAGCAGC...................................................................................................................................................................................................................................................................................26200.0510000000001
...................................................................................................................................................................................................................................................................................................................................C--------------AGCAA------------------------------------------CA------------G---CAGCAGCAACAGCAGCA.........................................................................................................................................................................................................................................................................26200.0510001000000
....................................................................................................................................................................................................GCAGCAACAGCAGCAGCAACA------------........................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.0510000100000
................................................................................................................................................................................................................GCAGCAACA------------GCA------GCAG---------CAGCAA---------CA---------------------------GCA...................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000001
.....................................................................................................................................................................................................CAGCAACAGCAGCAGCAACA------------GCA------GCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.0510001000000
.......................................................................................................................................................................................AGCAGCAGCAACAGCAGCAACAGCAGCA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.0510100000000
..................................................................................................................................................................................................................................................................................................................................................AGCAA------------------------------------------CA------------G---CAGCAGCAACAGCAGC..........................................................................................................................................................................................................................................................................24200.0510000000001
....................................................................................................................................................................................................GCAGCAACAGCAGCAGCAACA------------GCA------GCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510100000000
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAGCAACAGCAGCAGCAGCAG--------------------------------------------C...........................................................................23200.0510000100000
......................................................................................................................................................................................................AGCAACAGCAGCAGCAACA------------GCA------GCAG---------C.................................................................................................................................................................................................................................................................................................................................................................................................................................................27200.0510000000001
....................................................................................................................................................................................................................CAACA------------GCA------GCAG---------CAGCAA---------CA---------------------------GC....................................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
........................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAG----------------CAGCATCAG------CA...........................................................................................................................................................................................................................20200.0510100000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................AGCAACAGCAGCAGCAACAGCAGCAG----------------C...........................................................................................................................................................................................................................................27200.0510000000001
.......................................................................................................................................................................................................................................................................................................................CAGCAACAGCAGC--------------AGCAA------------------------------------------CA------------G---CAGCA.....................................................................................................................................................................................................................................................................................26200.0510001000000
..........................................................................................................................................................................................................ACAGCAGCAGCAACA------------GCA------GC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.0510100000000
.......................................................................................................................................................................................................................................A------GCAG---------CAGCAA---------CA---------------------------GCAACAACA.............................................................................................................................................................................................................................................................................................................................................................................................22200.0510100000000
.............................................................................................................................................................................................................................................................GCAA---------CA---------------------------GCAACAACAGCA---GCAGC..................................................................................................................................................................................................................................................................................................................................................................................23200.0510000001000
..............................................................................................................................................................................................................................................GCAG---------CAGCAA---------CA---------------------------GCAACAACAGC...........................................................................................................................................................................................................................................................................................................................................................................................23200.0510000100000
droPer2
CAACACCAA--------------------------------------------CAG---------------------------CAACAACAACAACAACAC------------------------------------------------------------------CAGCAACACCAACAACACCAACATCAGCTTCAACAACAGCATCAACAACA------------CC---------AA---CAG---CAACAG---------CA---------------------------GC---AGCAACA---------CCA-----ACAACACCAACAGCAGCAGCAA---------------------------------------CAGCAACACCACCAG------------------CACCAGCAACAGCTT----------------CATCAT------------CAT--------------------------------------------------------------CATCAGCAGC---AGCAACAGCAGCAGCA-----------------------------------------------------------ACAA---------------------------CGTGTTGCAAGCAGTAGCCTGCAACACCAGCAACSizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
........................................................................................................................................................................................................................................................................................................................................................AA---------------------------------------CAGCAACACCACCAG------------------CACC.......................................................................................................................................................................................................................................................................2111.001001000
...............................................................................................................................................................................................................ATCAACAACA------------CC---------AA---CAG---CAACAG---------CA---------------------------GC---.................................................................................................................................................................................................................................................................................................................................................................................................2711.001010000
....................................................................................................................................................................................................................CAACA------------CC---------AA---CAG---CAACAG---------CA---------------------------GC---.................................................................................................................................................................................................................................................................................................................................................................................................22200.051010000
...................................................................................................................................................................................................................ACAACA------------CC---------AA---CAG---CAACAG---------CA---------------------------GC---.................................................................................................................................................................................................................................................................................................................................................................................................23200.051010000
droWil2
CAGAG-GCA--------------------------------GTGAAGCAACAGCAA------CTGCAGCAGCAACAACAACAGCAGCAACAACAACAGCAG------------------------------------------------------------------CAGCA---------------------------------ACAACAGCAACAGCAACAACAACAGCA------GCAG---------CAACAACAAC---AAC---------------------------------AGCAGCA---GCAACAACAACAGC--------------AGCAACA------------------------------------------------------A---CAGCAGCAGCAGCAACAGCAACAACAGCAG----------------CAGCAACAA------CAACAG----------------------CAGCA--------------------------------AC--------AACAACAGCAGCAGCAGCAACAGCAA--------------------------------------------CAACAGCAGCAGCAA---------------------------------------------CAACAACAGCAGCAACSizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
.........................................GTGAAGCAACAGCAA------CTGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.50101000
..................................................................................................................................................................................................................................................................AAC---AAC---------------------------------AGCAGCA---GCAACA.................................................................................................................................................................................................................................................................................................................................................................................19200.20400040
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................G----------------------CAGCA--------------------------------AC--------AACAACAGCA........................................................................................................................................18200.15300030
..................................................................................GCAGCAACAACAACAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.15300030
..................................................................................................................................................................................................................AGCAACAGCAACAACAACAGCA------GCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.10202000
...............................................................................................................................................................................................................................ACAACAGCA------GCAG---------CAACAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10200002
...........................................................................................ACAACAGCAG------------------------------------------------------------------CAGCA---------------------------------ACAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10200002
...............................................................................................CAGCAG------------------------------------------------------------------CAGCA---------------------------------ACAACAGCA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.10202000
...................................................................................................................................................................................................................................................................................................................................C--------------AGCAACA------------------------------------------------------A---CAGCAGCAGCAGC.............................................................................................................................................................................................................................................................................22200.10200020
.......................................................................................................................................................................................................................................................................................................................CAACAACAACAGC--------------AGCAACA------------------------------------------------------A---CA........................................................................................................................................................................................................................................................................................23200.10200020
......................................................................GCAACAACAACAGCAGCAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.10200020
...............................................................TGCAGCAGCAACAACAACAGCAGCAACA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................28140.07100010
...........................................................................................................................................................................................................................AACAACAACAGCA------GCAG---------CAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100001
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACAG----------------------CAGCA--------------------------------AC--------AACAACAGCA........................................................................................................................................21200.05100001
...............................................................................................................................................................................................................................................................................................................................ACAGC--------------AGCAACA------------------------------------------------------A---CAGCAGCA..................................................................................................................................................................................................................................................................................21200.05100010
...........................................................................................................................................................................................................................................................................................................................AACAACAGC--------------AGCAACA------------------------------------------------------A---CAGC......................................................................................................................................................................................................................................................................................21200.05100010
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAGCAGCAA---------------------------------------------CAACA...........19200.05100001
.......................................................................................................................................................................................................................................A------GCAG---------CAACAACAAC---AAC---------------------------------AGCAG............................................................................................................................................................................................................................................................................................................................................................................................23200.05101000
............................................................................................................................................................................................................................ACAACAACAGCA------GCAG---------CAACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100010
...................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAACAGCA......................................................................................................................................................................................................................................................................20200.05100010
.............................................................................................AACAGCAG------------------------------------------------------------------CAGCA---------------------------------ACAACAGCAACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100100
...............................................................................................................................................................................................................................................CAG---------CAACAACAAC---AAC---------------------------------AGCAGC...........................................................................................................................................................................................................................................................................................................................................................................................22200.05100010
.......................................................................................................................................................................................................................................................................................................................................................CA------------------------------------------------------A---CAGCAGCAGCAGCAACAGCAA.....................................................................................................................................................................................................................................................................24200.05101000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAG----------------------CAGCA--------------------------------AC--------AACAACAGCAGC......................................................................................................................................25200.05100010
.....................................................................................................................................................................................................................AACAGCAACAACAACAGCA------GCAG---------CA................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
...............................................................................................................................................................................................................................................................AACAAC---AAC---------------------------------AGCAGCA---GCAA...................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
.....................................................................................................................................................................................................................AACAGCAACAACAACAGCA------GCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.05101000
............................................................................................................................................................................................................................................................................................................................ACAACAGC--------------AGCAACA------------------------------------------------------A---CAGCAGC...................................................................................................................................................................................................................................................................................23200.05100010
...................................................................................................................................................................................................................GCAACAGCAACAACAACAGC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05101000
...................................................................................................................................................................................................................................................................................................................................................GCAACA------------------------------------------------------A---CAGCAGCAGCAGC.............................................................................................................................................................................................................................................................................20200.05100010
...............................................................................................................................................................................................................................................................AACAAC---AAC---------------------------------AGCAGCA---GCAACAACAACA...........................................................................................................................................................................................................................................................................................................................................................................28200.05100010
......................................................................................................................................................................................................................................CA------GCAG---------CAACAACAAC---AAC---------------------------------AG...............................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
.................................................................................................................................................................................................................................................G---------CAACAACAAC---AAC---------------------------------AGCAGCA---GCA....................................................................................................................................................................................................................................................................................................................................................................................24200.05101000
...............................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAACAACAGCAG----------------CAGCAACAA------.............................................................................................................................................................................................................................27200.05100010
...............................................................................ACAGCAGCAACAACAACAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05100001
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAGCAACAGCA.........................................................................................................................20200.05100010
...............................................................................................................................................................................................................................................................................................................................ACAGC--------------AGCAACA------------------------------------------------------A---CAGCAGCAGCA...............................................................................................................................................................................................................................................................................24200.05100010
..................................................................................................................................................................................................................................................................AAC---AAC---------------------------------AGCAGCA---GCAACAACA..............................................................................................................................................................................................................................................................................................................................................................................22200.05100010
......................................................................................................................................................................................................................................................................................................................................................ACA------------------------------------------------------A---CAGCAGCAGCAGCAACAGC.......................................................................................................................................................................................................................................................................23200.05100010
............................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAACAACAGCAG----------------CAGCAA......................................................................................................................................................................................................................................27200.05101000
...........................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAACAACAGCAG----------------CAGC........................................................................................................................................................................................................................................26200.05101000
........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAGCAACAGCAA--------------------------------------------CAACAGCAGCAGC...............................................................26200.05101000
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAGCAA--------------------------------------------CAACAGCAG...................................................................24200.05100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAA--------------------------------------------CAACAGCAGCAGCAA---------------------------------------------................23200.05101000
........................................................................AACAACAACAGCAGCAACAAC................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.05101000
.................................................................................................................................................................................................................................................................CAAC---AAC---------------------------------AGCAGCA---GCAACAACA..............................................................................................................................................................................................................................................................................................................................................................................23200.05100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAACAGCAA--------------------------------------------CAACAGCAGCAGCAA---------------------------------------------................27200.05101000
.........................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAACAGCAACAACAGCAG----------------............................................................................................................................................................................................................................................24200.05100010
................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAACAGCAG----------------CAGCAACA....................................................................................................................................................................................................................................25200.05100010
..........................................................................................AACAACAGCAG------------------------------------------------------------------CAGCA---------------------------------ACAA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
................................................................................................................................................................................................................................................AG---------CAACAACAAC---AAC---------------------------------AGCAGCA---GCAAC..................................................................................................................................................................................................................................................................................................................................................................................27200.05100010
...........................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAG----------------CAGCAACAA------CAACAG----------------------CAGCA--------------------------------............................................................................................................................................................26200.05100001
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAGCAA--------------------------------------------CAACAGCAGCAGCAA---------------------------------------------CAA.............27200.05100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAGCAGCAGCAA---------------------------------------------CAACAACAGCAGCA..26200.05100001
............................................................................................................................................................................................................................ACAACAACAGCA------GCAG---------CAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................19200.05100010
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AG----------------------CAGCA--------------------------------AC--------AACAACAGCAG.......................................................................................................................................20200.05100010
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAA--------------------------------------------CAACAGCAGCAGCAA---------------------------------------------CA..............25200.05100010
.............................................................................CAACAGCAGCAACAACAACAGCAG------------------------------------------------------------------C.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................25200.05100010
................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAACAACAGCAG----------------CAGCAA......................................................................................................................................................................................................................................23200.05101000
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCA--------------------------------AC--------AACAACAGCAGCAGCAGCA...............................................................................................................................24200.05100010
.........................................................................................................................................................................................................................................................................................................................................................................................................................................AACAGCAG----------------CAGCAACAA------CA...........................................................................................................................................................................................................................19200.05100001
.................................................................................AGCAGCAACAACAACAGCAG------------------------------------------------------------------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
....................................................................................................................................................................................................................CAACAGCAACAACAACAGCA------...............................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05100010
.............................................................................................................................................................................................................................CAACAACAGCA------GCAG---------CAACAACA..........................................................................................................................................................................................................................................................................................................................................................................................................................................23200.05100010
droVir3
CAACAGCAA--------------------------------------------CAG---------------------------CAACATTAACAGCAGCAGCAG---------------------------------------------------------------CAGCAACATTAACAGCAACAATAACAGCAACAGC---AACAACAACAACAGCA---------GC------AGCAG---------CAATAG---------CG---------------------------GC---AACAGCA---------GCA----------------------------------------------A-CAACAATAGCAATAA---CAACAACACCAACAG---------CAACAGCAACAGCAACAATAA----------------------------------------------------TAAT-AATAGCAATAACAAC--AACACCAATAAC---A-----------------------ATAATAATAATAATAGCAATAA--------------------------------------------CAACAACAACAACAA---------------------------------------------CAACAACAACAGCAACSizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
.......................................................................................ATTAACAGCAGCAGCAG---------------------------------------------------------------CAGCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2311.001000000000000000000000000000000000001000000000000000000000000000
...................................................................................CAACATTAACAGCAGCAGCAG---------------------------------------------------------------......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2120.501000000000000000000000000000000000000000100000000000000000000000
.............................................................................................................................................................................................................................................................................................................................................................................................A---CAACAACACCAACAG---------CAACAGCAA...........................................................................................................................................................................................................................................................................2530.331000000000000001000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................ACAACAACAGCA---------GC------AGCAG---------CA................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.255004000000000000000000000000001000000000000000000000000000000000
......................................................................................CATTAACAGCAGCAGCAG---------------------------------------------------------------CAGC..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................2240.251000000000000000000000000000000000010000000000000000000000000000
.......................................................................................................................................................................CAGCAACATTAACAGCAAC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1950.201000000000000000000000000000000000000100000000000000000000000000
................................................................................................................................................................................................................................................................G---------CG---------------------------GC---AACAGCA---------GCA----------------------------------------------A-CAACA.........................................................................................................................................................................................................................................................................................................................2160.171001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................AACAACAACAACAGCA---------GC------AGCAG---------CAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................2760.171000000000000000000000000000000000001000000000000000000000000000
..........................................................................................................................................................................................................................................................................................................................................................................................................CAACAG---------CAACAGCAACAGCAA.....................................................................................................................................................................................................................................................................21200.153000000000000000000000000000000300000000000000000000000000000000
......................................................AG---------------------------CAACATTAACAGCAGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................1870.141001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................................................................................................................CAACAACACCAACAG---------CAACAGCA............................................................................................................................................................................................................................................................................2380.131001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................................................CAACAACAGCA---------GC------AGCAG---------CAATA.............................................................................................................................................................................................................................................................................................................................................................................................................................................2380.131000000000000000000000000000000010000000000000000000000000000000
..............................................................................................................................................................................................................CAACAACAACAGCA---------GC------AGCAG---------..................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000000000000000000000000000000000000002000000000000000000000000
.......................................................................................................................................................................................................GC---AACAACAACAACAGCA---------GC------A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102001000000000000000000000001000000000000000000000000000000000000
............................................................................................................................................................................................................AACAACAACAACAGCA---------GC------AGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.102000000000000000002000000000000000000000000000000000000000000000
........................................................................................TTAACAGCAGCAGCAG---------------------------------------------------------------CAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21110.091000000000000000000000000000000000000000000000000000000000001000
............................................................................................................................................................................................................................................................................................................................................................................................AA---CAACAACACCAACAG---------CAACA...............................................................................................................................................................................................................................................................................22120.081000000000000000000000010000000000000000000000000000000000000000
.......................................................................................................................................................................................AACAATAACAGCAACAGC---AACA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................22140.071001000000000000000000000000000000000000000000000000000000000000
.........................................................................................TAACAGCAGCAGCAG---------------------------------------------------------------CAGCAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................23150.071000000000000000000000000010000000000000000000000000000000000000
..................................................................................................................................................................................................................AACAACAGCA---------GC------AGCAG---------CAAT..............................................................................................................................................................................................................................................................................................................................................................................................................................................21160.061000000000000000000000000100000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................................................................................................................ACACCAACAG---------CAACAGCAAC..........................................................................................................................................................................................................................................................................20170.061000000000000000100000000000000000000000000000000000000000000000
........................................................................................................................................................................................ACAATAACAGCAACAGC---AAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20180.061001000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................................................................................................................CAACACCAACAG---------CAACAGCA............................................................................................................................................................................................................................................................................20190.051000000000000001000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................ACAG---------CAACAGCAACAGCAACA...................................................................................................................................................................................................................................................................21200.051001000000000000000000000000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAA---------------------------------------------CAACAACAACAGCA..19200.051000000000000000000000000000000010000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACAACAA---------------------------------------------CAACAACAACAGC...22200.051000100000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................................................................CAACAGC---AACAACAACAACAGCA---------GC------A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................26200.051000000000000000000000100000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATAA--------------------------------------------CAACAACAACAACAA---------------------------------------------CAACA...........25200.051001000000000000000000000000000000000000000000000000000000000000
.................................................................................................................................................................................AACAGCAACAATAACAGCA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000001000000000000000000000000000000000
..........................................................................................AACAGCAGCAGCAG---------------------------------------------------------------CAGCA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000010000000000000000000000000000000000000000
..............................................................................................................................................................................................................CAACAACAACAGCA---------GC------AGCAG---------C.................................................................................................................................................................................................................................................................................................................................................................................................................................................22200.051000000000000000010000000000000000000000000000000000000000000000
..........................................................................................AACAGCAGCAGCAG---------------------------------------------------------------CAGCAA................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.051000000000000000000000000100000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................................................................................................................AACAG---------CAACAGCAACAGC.......................................................................................................................................................................................................................................................................18200.051000000000000000000000000000001000000000000000000000000000000000
....................................................................................................................................................................................................ACAGC---AACAACAACAACAGCA---------GC------A...............................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
.............................................................................................................................................................................................................ACAACAACAACAGCA---------GC------AGCAG---------C.................................................................................................................................................................................................................................................................................................................................................................................................................................................23200.051000000000000000000000000000001000000000000000000000000000000000
...................................................................................................................................................................................................AACAGC---AACAACAACAACAGCA---------GC------AGCA............................................................................................................................................................................................................................................................................................................................................................................................................................................................28200.051001000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................AGC---AACAACAACAACAGCA---------GC------AGC.............................................................................................................................................................................................................................................................................................................................................................................................................................................................24200.051001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................TAACAGCAACAGC---AACAAC...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................19200.051000000000000000000000000000000000000000000000000000000000001000
...........................................................................................ACAGCAGCAGCAG---------------------------------------------------------------CAGCAACA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................21200.051000000000000000000000010000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................................................................................................................................ACAG---------CAACAGCAACAGCAACAA..................................................................................................................................................................................................................................................................22200.051000000000000000000000010000000000000000000000000000000000000000
droMoj3
CAACAGCAA--------------------------------------------CAG---------------------------CAGCAACAACAACAATA---------------------------------------------------------------------ACAACAACAAGAACAGCAACAACAACAAGAACTGCAACAACAACAACA------------A---------CAA---------CAAC---------------------------------------------------A---G--------------CCACAACAGCAACAACAACA------------------------------------------------------ATAGC---AACCACAGCAACAACAACAACAACAA----------------CAACAA------------CAG----------CA------ATAGCAACA--------------------------------AC--------AGCAACAACAGCAACAACAACAACAA--------------------------------------------CAACAACAACGGTAA---------------------------------------------CAACAACAATAGCAACSizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
......................................................................................................................................................................................................AACTGCAACAACAACAAC.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................18200.051000010
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAACAGCAACAACAACAACA.........................................................................................................................22200.051100000
droGri2
CAACAACTG--------------------------------------------CAA---------------------------CAACAACTGCAACAACAA------------------------------------------------------------------CTGCAACAACAAGAGCAACAACAACATCAACAACAACAGCAACAACAACA------------GC------AACAA---------CAACAG---------CA---------------------------AC---AACAACAGCAACAACAACA-----------------GCAACAACAA---------------------------------------CA------------G---CAACAACACCAACAATATCAACATCAAC-------------------AACAA----------------------CAGCACAAACAACAGCAACA--------------------------------AC--------AACTGCAACAACAAGAGCAGCAGCAA--------------------------------------------GAGCAACAACAACAT---------------------------------------------CAACAACAACAGCAACSizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
..........................................................................................................................................................................CAACAACAAGAGCAACAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................20200.05110

Generated: 05/17/2015 at 10:15 PM