der_366

CDS [Dere\GG18852-cds]; exon [dere_GLEANR_3651:3]; CDS [Dere\GG18852-cds]; exon [dere_GLEANR_3651:2]; intron [Dere\GG18852-in]

##################################################-----------------------------------------------------------------------------------------------------------------------------------------------################################################## CCTGCCTCACGTCGCTCAGCACAGGCGGAATTATTGCCAAGACGATCTATGTGAGTATAATCTGCCACTTACCTGTACTACACTATACTATATACTGTGTATATAGATGTACTATACCATGTACATGGAGATGTGAATATTTTAGTACGAGAGCAGCCAACAATCACTGCAATTCACTCATTACATCTTGCAGGAGCTGATTTACCACAGTGTGGCCGCCATCCTGATCCTGGCCTCGTCCAC ************************************************(((((((((..............)))))).)))....((((((((...))))))))((((((........)))))).(((((((((.......(((..(((.((((..........))))..))))))..)))))))))....************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V040 embryo	M057 embryo	V107 male body	V108 head	V060 head
.....CGCACGTCGCTCAGCACAGGC.........................................................................................................................................................................................................................	21	1	1	1.00	1	0	1	0	0	0
......................................................................................................................................................................................................GATTTACCACAGTGTGGCCGC........................	21	0	1	1.00	1	0	0	0	1	0
..............................TTATTGCCAAGACGATCTATGAGC.............................................................................................................................................................................................	24	2	1	1.00	1	1	0	0	0	0
..............................................................................................................................................................................................TATGAGCTGATTTACCACAGT................................	21	2	1	1.00	1	0	0	1	0	0
......................................................................................................................................................................................................GATTTACCACAGTGTGGCC..........................	19	0	1	1.00	1	0	1	0	0	0
..............................................................................................................................................TAGTACGAGAGGACCGAAC..................................................................................	19	3	2	0.50	1	0	0	1	0	0
................CAGCACAGGCTGAGTTATTGC..............................................................................................................................................................................................................	21	2	2	0.50	1	0	0	0	0	1
..................................TGCCAAGACGATCTATGAGCT............................................................................................................................................................................................	21	3	2	0.50	1	1	0	0	0	0
................CAGCACAGGCGGAGTTCTTGCT.............................................................................................................................................................................................................	22	3	3	0.33	1	0	0	0	0	1
................CAGCACAGCCTGAGTTATTGC..............................................................................................................................................................................................................	21	3	6	0.17	1	0	0	0	0	1
..............................................................................................CTGTATATATAGATGTTCTATG...............................................................................................................................	22	3	6	0.17	1	1	0	0	0	0
..................................................................................................................................................ACGATGGCAGCCAACAATCGC............................................................................	21	3	8	0.13	1	1	0	0	0	0
..............................................................................................CTGGGTGTATAGAGGTACT..................................................................................................................................	19	3	9	0.11	1	1	0	0	0	0
............................................................TCTGCCTCATACCGGTACT....................................................................................................................................................................	19	3	12	0.08	1	1	0	0	0	0
.................................................TGAGAGGGTAATCTGCCAC...............................................................................................................................................................................	19	3	14	0.07	1	0	0	0	1	0
..............................................................................................CTGCGTAAATAGACGTACT..................................................................................................................................	19	3	15	0.07	1	1	0	0	0	0
...............................TATTGCAAAGACGCTCCAT.................................................................................................................................................................................................	19	3	20	0.05	1	1	0	0	0	0

GGACGGAGTGCAGCGAGTCGTGTCCGCCTTAATAACGGTTCTGCTAGATACACTCATATTAGACGGTGAATGGACATGATGTGATATGATATATGACACATATATCTACATGATATGGTACATGTACCTCTACACTTATAAAATCATGCTCTCGTCGGTTGTTAGTGACGTTAAGTGAGTAATGTAGAACGTCCTCGACTAAATGGTGTCACACCGGCGGTAGGACTAGGACCGGAGCAGGTG ************************************************(((((((((..............)))))).)))....((((((((...))))))))((((((........)))))).(((((((((.......(((..(((.((((..........))))..))))))..)))))))))....************************************************	Read size	# Mismatch	Hit Count	Total Norm	Total	V107 male body
...........................................CTAGAGACACTCATACAAGA....................................................................................................................................................................................	20	3	7	0.14	1	1

Species	Coordinate	ID	Alignment
droEre2	scaffold_4690:3712240-3712482 +	der_366	CCTGCCTCACGTCGCTCAGCACAGGCGGAATTATTGCCAAGACGATCTATGTGAGTATAATCT------GCCACTTACCTGTACTACACTATACTATATACTG-------------T------------GTAT--ATAGATGTACTATACCATGTACATGGAGATGTGAATATTTTAGTACGAGAGCAGC-------------------------------------------------------------------CAA-----------------------------------------------------------------------------------------------CAATCACT---GCA-----------------------------AT-------------------------------------TCAC---------------------------TC---ATTACATCTTGCAGGAGCTGATTTACCACAGTGTGGCCGCCATCCTGATCCTGGCCTCGTCCAC
droYak3	X:10712632-10712794 +		CCTGCCTCACGTCGCTCAGCACGGGCGGCATTATTGCCAAGACAATCTATGTAAGTATAATC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAAGA-GCTT-TAATTGG--CTAAACAATTTT-AT---------------------TGGT-CA---ATACT-TTTTGCAGGAGCTGATTTACCACAGTGTGGCCGCCATCCTGATCCTGGTCTCGTCCAC
droSec2	scaffold_36:163864-164094 -		CCTGCCTCACGTCGCTCAGCACGGGAGGCATTATTGCCAAGACGATCTATGTGAGTATAATC-ATCGTTGCTATATCTTTTGGATTAC---------------TTAGGATTAGCCATGGAACTCCAAACGTACACATATGTATGCTTGGCCTTATATCTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATCACT---GCA-----------------------------TT-------------------------------------TCAAT---------------------GA---CCATTC-ACC-TTTTGCAGGAGCTGATTTACCACAGTGTGGCCGCCATCCTGATCCTGGTCTCGTCCAC
droSim2	x:10849847-10850077 -		CCTGCCTCACGTCGCTCAGCACGGGAGGCATTATTGCCAAGACGATCTATGTGAGTATAATC-ATCATTGCTATATCTTTTGGATTCC---------------TTAGGATTAGCCATGGAACTCCAAACGTACACATATGTATGCTTGGCCTTATATCTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATCACT---GCA-----------------------------TT-------------------------------------TCAAT---------------------GA---CCATTC-ACC-TTTTGCAGGAGCTGATCTACCACAGTGTGGCCGCCATCCTGATCCTGGTCTCGTCCAC
dm3	chrX:11449779-11450008 -		CCTGCCTCACGTCGCTCAGCACGGGCGGCATTATTGCCAAGACGATCTATGTGAGTATAATC-ATCATTGCTATATCTTTTGTATACT---------------TTAGTATTAGCCATGGAACTCCAAACGTAC--ATATATATACTTCGCCTTGTATCTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATCCGT---GCA-----------------------------TT-------------------------------------TCAAC---------------------GA---CCATTAACCT-TTTTGCAGGAGCTGATTTACCACAGTGTGGCCGCCATCCTGATCCTGGTCTCGTCCAC
droEug1	scf7180000408176:623463-623795 -		CCTGTCTCACATCCCTGAGTACGGGAGGCATTATTGCCAAGACGATCTATGTAAGTATTGTT-A---TTGC-GCATCCTTTTAATTCA---------------TA-------------------------------------------------------------------------------------TTAAGATTAAATGTTAGAGAGATTTTCATAAAGGGATATATTTTATGATATTCAAACTTTACTTTTGAAGCCATTAATATGACTCACTGCTTACAACTACTTTTTATGAGTCATAACATATACTGATTGTTAGGTTTTCATAGTTTTTTATAGTCCTAGCCACCGGCATC--------A-----------------------------TT-------------------------------------ATAAT---------------------GC---TCAATATTAT-TTTATTAGGAGCTGATTTATCACAGCGTGGCCGCCATCCTGATCCTTGCCTCCTCCAC
droBia1	scf7180000301760:538257-538313 -		C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAGGAGCTGATCTACCACAGCGTGGCCGCCATCCTGATCCTGGCCTCGTCCAC
droTak1	scf7180000415843:409912-409968 -		C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAGGAGCTGATCTACCACAGCGTGGCCGCCATCCTGATCCTGGCGTCGTCCAC
droEle1	scf7180000491193:267777-267843 +		ACC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---ATTAT-TTTTGCAGGAGCTGATTTACCACAGCGTTGCCGCCATCCTGATCCTCGTTTCGTCCAC
droRho1	scf7180000779986:454220-454288 -		TCACCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTT-GTTTGCAGGAGCTGATTTATCACAGCGTGGCCGCCATCCTGATCCTGGCCTCGTCCAC
droFic1	scf7180000453872:286637-286692 -		-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAGGAGCTGATCTACCACAGCGTGGCCGCCATCCTGATCCTGACCTCGTCCAC
droKik1	scf7180000302344:187549-187605 -		CCTGCCTCACGTCGCTGAGTACGGGTGGAATTATAGCAAAGACGATTTACGTGAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
droAna3	scaffold_13047:196617-196776 -		CCTGTCTCACCTCGCTGAGCACCGGAGGCATTATTGCCAAGACGATTTATGTACGTTCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGATAGCTTAA---------TGAAACTG-----------------T-------------------------------ACTCACCCTTCT-G--------------------------T-T---GACCC-TTCTTCAGGAGCTGATCTACCACAGCGTGGCTGCCATCCTGCTGCTGGCCTCCTCCAT
droBip1	scf7180000396425:345880-346039 -		CCTGTCTCACCTCGCTGAGCACGGGAGGCATCATTGCCAAGACGATTTATGTACGTTCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGATAGTTAAG---------AGAAACTG-----------------T-------------------------------ACTCACCTATTT-G--------------------------T-T---AATCC-TCTTCCAGGAGCTGATCTACCACAGCGTAGCTGCTATTCTGCTGCTGGCCTCCTCCAT
dp5	XL_group1a:8839392-8839563 +	dps_2587	CCTGCCTCACCTCCCTCAGCACGGGGGGCATCATCGCCAAGACGATTTACGTGAGTGCCGCAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCTTGCATTGATCTTTGCCATGTTT-TCATTGG-GCCC-GTATTGG--TTGTA---------------------------------------------T-TATTGCAGGAGCTGATCTACCACAGCGTCGCTGCCATACTGATCCTGGCCGCATCCAT
droPer2	scaffold_15:1236586-1236757 +		CCTGCCTCACCTCCCTCAGCACGGGGGGCATCATCGCCAAGACGATTTACGTGAGTGGCGCAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCTTGCATTGATCTTTGCCATGTTT-TGATTGG-GCCC-GTATTGG--TTGTA---------------------------------------------T-TATTGCAGGAGCTGATCTACCACAGCGTCGCTGCCATACTGATCCTGGCCGCATCCAT
droWil2	scf2_1100000004909:11794961-11795123 +		CCTGTCTGACATCGCTCAGCACTGGCGGCATTATAGCCAAAACCATTTATGTAAGTTCAAATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------TCTAACAATTCA-GATTCAGAATATTAATGAGTTTG----G-----AATTT-CTTTGCAGGAGCTGATCTATCACAGCATTGCGGCCATATTGCTTTTGGCTTCCTCAAC
droVir3	scaffold_12970:9277334-9277515 +	dvi_13731	CGTGCCTCACATCGCTGAGCACGGGCGGGCTCATCGCCAAGACAATCTATGTAAGTGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGCTTGACTGCTGAATTGAAG---CC-------CGAACCTGAA-----------ATCGAAAACTA-AAT-GTTGACAAAT---T-------------------------------T---TTTGA-ATTTACAGGAGCTGATCTATCATAGTGTTGCGGCCATACTGCTGCTCGCCTCGTCCGT
droMoj3	scaffold_6473:13370862-13371051 -		CGTGTCTCACATCGCTAAGCACGGGCGGACTCATCGCCAAGACAATCTACGTGAGTGAACAA-AATATTACGATAG---------------------------TTCTAATTTGAGCTGCGATTGCAAATGTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-TAATCAA-CC----------------------TCAAT---------------------TGGG-CT---ATTCC-ATTTATAGGAGCTGATCTATCACTCTGTTGCCGCCATACTGTTGCTCGTCTCGTCCGC
droGri2	scaffold_14853:6005307-6005486 +		CGTGCATCACATCGCTGAGCACGGGTGGCCTCATCGCCAAGACAATCTATGTAAGTGTGATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAA------------TTTAATTGATCTTGATTATGATTATGATTTG-TAACTATAAC-GTTGATCAACT---------------------------------------TTCG-ATTCACAGGAGCTGATCTATCATAGCGTTGCGGTCATTCTGCTGCTCGCCTCGTCCAT

Re-alignment of all predicted orthologs with sRNA reads

Species

Read alignment

droEre2

CCTGCCTCACGTCGCTCAGCACAGGCGGAATTATTGCCAAGACGATCTATGTGAGTATAATCT------GCCACTTACCTGTACTACACTATACTATATACTG-------------T------------GTAT--ATAGATGTACTATACCATGTACATGGAGATGTGAATATTTTAGTACGAGAGCAGC-------------------------------------------------------------------CAA-----------------------------------------------------------------------------------------------CAATCACT---GCA-----------------------------AT-------------------------------------TCAC---------------------------TC---ATTACATCTTGCAGGAGCTGATTTACCACAGTGTGGCCGCCATCCTGATCCTGGCCTCGTCCAC	Size	Hit Count	Total Norm	Total	M055 Female-body	M057 Embryo	V060 Head	V040 Embryo	V107 Male-body	V108 Head	GSM1528801 follicle cells
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTACCACAGTGTGGCCGC........................	21	1	1.00	1	0	0	0	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTACCACAGTGTGGCC..........................	19	1	1.00	1	0	1	0	0	0	0	0

droYak3

CCTGCCTCACGTCGCTCAGCACGGGCGGCATTATTGCCAAGACAATCTATGTAAGTATAATC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTAAAGA-GCTT-TAATTGG--CTAAACAATTTT-AT---------------------TGGT-CA---ATACT-TTTTGCAGGAGCTGATTTACCACAGTGTGGCCGCCATCCTGATCCTGGTCTCGTCCAC	Size	Hit Count	Total Norm	Total	M026 Head	M043 Female-body	M056 Embryo	V046 Embryo	V052 Head	V058 Head	V120 Male-body	SRR1275488 Male larvae	SRR1275486 Male prepupae	SRR1275484 Male prepupae	GSM1528802 follicle cells
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGATTTACCACAGTGTGGCCGC........................	22	1	1.00	1	0	1	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATTTACCACAGTGTGGCC..........................	22	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0

droSec2

CCTGCCTCACGTCGCTCAGCACGGGAGGCATTATTGCCAAGACGATCTATGTGAGTATAATC-ATCGTTGCTATATCTTTTGGATTAC---------------TTAGGATTAGCCATGGAACTCCAAACGTACACATATGTATGCTTGGCCTTATATCTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATCACT---GCA-----------------------------TT-------------------------------------TCAAT---------------------GA---CCATTC-ACC-TTTTGCAGGAGCTGATTTACCACAGTGTGGCCGCCATCCTGATCCTGGTCTCGTCCAC	Size	Hit Count	Total Norm	Total	M054 Female-body	V113 Male-body	V114 Embryo	V115 Head
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATCCTGATCCTGGTCTCGTCCA.	24	1	1.00	1	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGATCCTGGTCTCGTC...	20	1	1.00	1	0	0	1	0
..........GTCGCTCAGCACGGGAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	1	0

droSim2

CCTGCCTCACGTCGCTCAGCACGGGAGGCATTATTGCCAAGACGATCTATGTGAGTATAATC-ATCATTGCTATATCTTTTGGATTCC---------------TTAGGATTAGCCATGGAACTCCAAACGTACACATATGTATGCTTGGCCTTATATCTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCATCACT---GCA-----------------------------TT-------------------------------------TCAAT---------------------GA---CCATTC-ACC-TTTTGCAGGAGCTGATCTACCACAGTGTGGCCGCCATCCTGATCCTGGTCTCGTCCAC	Size	Hit Count	Total Norm	Total	M023 Head	M024 Male-body	M025 Embryo	M053 Female-body	O001 Testis	O002 Head	SRR553485 Ovary	SRR553486 Ovary	SRR553487 Ovary	SRR553488 Ovary	SRR618934 Ovary	V044 Embryo	SRR902008 Ovary	SRR902009 Testis	SRR1275487 Male larvae	SRR1275485 Male prepupae	SRR1275483 Male prepupae
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCCGCCATCCTGATCCTG...........	19	1	1.00	1	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................GCACGGGAGGCATTATTGCCAAGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	1	1.00	1	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0

dm3

CCTGCCTCACGTCGCTCAGCACGGGCGGCATTATTGCCAAGACGATCTATGTGAGTATAATC-ATCATTGCTATATCTTTTGTATACT---------------TTAGTATTAGCCATGGAACTCCAAACGTAC--ATATATATACTTCGCCTTGTATCTG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAATCCGT---GCA-----------------------------TT-------------------------------------TCAAC---------------------GA---CCATTAACCT-TTTTGCAGGAGCTGATTTACCACAGTGTGGCCGCCATCCTGATCCTGGTCTCGTCCAC	Size	Hit Count	Total Norm	Total	GSM154618 Ovary	GSM154620 Ovary	GSM154621 Ovary	GSM154622 Ovary	GSM180328 Head	GSM180329 Mixed-body	GSM180330 Embryo	GSM180331 Embryo	GSM180332 Embryo	GSM180333 Embryo	GSM180334 Larvae	GSM180335 Disc	GSM180336 Pupae	GSM180337 S2	GSM231091 Ovary	GSM239041 Head	GSM239050 Head	GSM239051 S2	GSM239052 S2	GSM246084 Head	GSM266765 S2	GSM280082 Ovary	GSM280083 Ovary	GSM280084 Ovary	GSM280085 Testis	GSM280086 Ovary	GSM280087 S2-NP	GSM280088 S2-NP	GSM312995 Head	GSM313160 Head	GSM313161 Head	GSM313162 Head	GSM313163 Head	GSM313164 Head	GSM313165 Head	GSM343287 Embryo	GSM379050 Ovary	GSM379051 Ovary	GSM379052 Ovary	GSM379053 Ovary	GSM379054 Ovary	GSM379055 Ovary	GSM379056 Ovary	GSM379057 Ovary	GSM379058 Ovary	GSM379059 Ovary	GSM379060 Ovary	GSM379061 Ovary	GSM379062 Ovary	GSM379063 Ovary	GSM379064 Ovary	GSM379065 Ovary	GSM379066 Ovary	GSM379067 Ovary	GSM424739 S2	GSM424740 S2	GSM424741 S2	GSM467729 Female-body	GSM467730 Female-body	GSM467731 Female-body	M002 CS	M003 Male-body	M004 Male-body	M005 ML-DmD32	M006 ML-DmD32	M029 OSC	M030 OSC	M031 OSC	M032 S2-R+	M033 S2-R+	M034 S2-R+	M035 S2-R+	M036 S2-R+	M037 S2-R+	M038 S2-R+	M039 S2-R+	M048 S2-R+	OSS2 OSS	OSS6 OSS	OSS7 OSS	OSS8 OSS	S1 Head	S10 Embryo	S11 Embryo	S12 Embryo	S13 Embryo	S14 Embryo	S15 S2-GMR	S16 Kc	S17 Larvae	S18 Larvae	S19 Pupae	S2 Head	S20 Pupae	S21 Disc	S22 Head	S23 Female-body	S24 Male-body	S25 Larvae	S26 Larvae	S27 Pupae	S28 Pupae	S29 Head	S3 Male-body	S30 S2-GMR	S31 S2	S32 S2	S33 Kc	S34 Kc	S35 Kc	S4 Female-body	S5 Disc	S6 Embryo	S7 Embryo	S8 S2	S9 Embryo	SRR001337 Head	SRR001338 Head	SRR001339 Head	SRR001340 Head	SRR001341 Head	SRR001342 Head	SRR001343 Head	SRR001344 Head	SRR001345 Head	SRR001346 Head	SRR001347 Head	SRR001348 Head	SRR001349 Head	SRR001664 Head	SRR010951 Ovary	SRR010952 Ovary	SRR010953 Ovary	SRR010954 Ovary	SRR010955 Ovary	SRR010956 Ovary	SRR010957 Ovary	SRR010958 Ovary	SRR010959 Ovary	SRR010960 Ovary	SRR014268 Embryo	SRR014269 Embryo	SRR014270 Embryo	SRR014271 Embryo	SRR014272 Embryo	SRR014273 Ovary	SRR014274 Ovary	SRR014275 Ovary	SRR014276 Ovary	SRR014277 Ovary	SRR014278 Ovary	SRR014279 Ovary	SRR014280 Ovary	SRR014281 Ovary	SRR014282 Ovary	SRR023197 S2	SRR023399 S2	SRR023400 S2	SRR023402 S2	SRR023407 S2	SRR029028 S2	SRR029029 S2	SRR029030 S2	SRR029031 S2	SRR029032 S2	SRR029033 S2	SRR029608 Head	SRR029633 Head	SRR030145 gb3	SRR031692 Head	SRR031693 Head	SRR031694 Head	SRR031696 Head	SRR031697 Head	SRR031698 Head	SRR031699 Head	SRR031700 Head	SRR031701 Head	SRR031702 Head	SRR031703 Head	SRR031704 Head	SRR032092 S2	SRR032093 S2	SRR032094 S2	SRR032095 S2-NP	SRR032096 S2-NP	SRR032152 Head	SRR060643 Testis	SRR060644 Ovary	SRR060645 Testis	SRR060646 Ovary	SRR060647 Ovary	SRR060648 Ovary	SRR060649 Ovary	SRR060650 Testis	SRR060651 Ovary	SRR060652 Testis	SRR060653 Ovary	SRR065151 Ovary	SRR065152 Ovary	SRR065153 Ovary	SRR065154 Ovary	SRR065155 Ovary	SRR065800 Ovary	SRR065801 Ovary	SRR065802 Ovary	SRR065803 Ovary	SRR065804 Ovary	SRR065805 Ovary	SRR065806 Ovary	SRR065807 Ovary	SRR097865 S2-NP	SRR097866 S2-NP	SRR097867 S2-NP	SRR298536 Ovary	SRR298537 Ovary	SRR298711 Ovary	SRR298712 Ovary	SRR317110 Ovary	SRR317111 Ovary	SRR317112 Ovary	SRR317113 Ovary	SRR317114 Ovary	SRR317115 Ovary	SRR317116 Ovary	SRR317117 Ovary	SRR341115 S2	SRR341116 S2	SRR341117 S2	SRR341118 S2	SRR351332 Mixed-body	SRR351333 Mixed-body	T004 OSC	T005 CME-L1	V001 Embryo	V002 Embryo	V003 S2	V006 Female-body	V007 Head	V008 S2	V009 CME-L1	V010 ML-DmD20-C5	V011 Sg4	V012 Male-body	V013 Head	V014 DTT	V015 DreRFHV	V018 Kc167	V019 GM2	V020 S2-R+	V021 ML-DmD21	V022 ML-DmD32	V023 Head	V024 Kc167	V025 S2-R+	V026 1182-2H	V027 ML-DmD21	V028 CME-W1-Cl.8+	V029 ML-DmD9	V030 ML-DmD8	V031 GM2	V032 S1	V033 CME-W1-Cl.8+	V034 ML-DmD16-C3	V035 ML-DmD32	V036 ML-DmD20-C5	V037 S2	V038 S2	V063 Ovary	V0632 Ovary	V064 Ovary	V0642 Ovary	V065 Ovary	V0652 Ovary	V066 Ovary	V0662 Ovary	V067 S2-NP	V073 mbn2	V074 S3	V075 ML-DmBG1-C1	V076 ML-DmBG3-C2	V077 Head	V078 Head	V079 Head	V080 Head	V081 Embryo	V082 Embryo	V083 Male-body	V084 Female-body	V085 CME-W2	V086 Female-body	V088 Ovary	V0882 Ovary	V089 Ovary	V0892 Ovary	V090 Male-body	V091 fGS/OSS	V092 Male-body	V093 Male-body	V094 S2-R+	V095 S2-R+	V096 Ovary	V097 Ovary	V098 Ovary	V125 ML-DmD9	V126 CME-L1	V127 G2	V128 S3	V129 ML-DmBG1-C1	V130 ML-DmBG3-C2	V131 ML-DmD16-C3	V132 ML-DmD32	V133 Sg4	V134 ML-DmD8	V135 CME-W2	V136 Male-body	V137 Head	V138 Male-body	V139 Female-body	V140 Female-body	V141 Female-body	V142 Female-body	V144 OSC	V145 S2	V146 S1	V147 1182-2H	V148 mbn2	GSM1528798 follicle cells
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATCCTGATCCTGGTCTCGTCC..	23	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CT-TTTTGCAGGAGCTGATTTACCAC...................................	25	1	2.00	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCCGCCATCCTGATC..............	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
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.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATCCTGATCCTGGTCTCGTCCA.	23	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0
..............................TTATTGCCAAGACGATCTATGA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
.............................ATTATTGCCAAGACGATCT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............TCAGCACGGGCGGCATTATTG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGCCGCCATCCTGATCC.............	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
....CCTCACGTCGCTCAGCACG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCTGATCCTGGTCTCGT....	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
...............................TATTGCCAAGACGATCTATGTGAGTAA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	27	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGCAGGAGCTGATTTACCACAGTG...............................	25	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................TTGCCAAGACGATCTAT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	17	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droEug1

CCTGTCTCACATCCCTGAGTACGGGAGGCATTATTGCCAAGACGATCTATGTAAGTATTGTT-A---TTGC-GCATCCTTTTAATTCA---------------TA-------------------------------------------------------------------------------------TTAAGATTAAATGTTAGAGAGATTTTCATAAAGGGATATATTTTATGATATTCAAACTTTACTTTTGAAGCCATTAATATGACTCACTGCTTACAACTACTTTTTATGAGTCATAACATATACTGATTGTTAGGTTTTCATAGTTTTTTATAGTCCTAGCCACCGGCATC--------A-----------------------------TT-------------------------------------ATAAT---------------------GC---TCAATATTAT-TTTATTAGGAGCTGATTTATCACAGCGTGGCCGCCATCCTGATCCTTGCCTCCTCCAC	Size	Hit Count	Total Norm	Total
No Reads

droBia1

C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAGGAGCTGATCTACCACAGCGTGGCCGCCATCCTGATCCTGGCCTCGTCCAC	Size	Hit Count	Total Norm	Total
No Reads

droTak1

C------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAGGAGCTGATCTACCACAGCGTGGCCGCCATCCTGATCCTGGCGTCGTCCAC	Size	Hit Count	Total Norm	Total
No Reads

droEle1

ACC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------C---ATTAT-TTTTGCAGGAGCTGATTTACCACAGCGTTGCCGCCATCCTGATCCTCGTTTCGTCCAC	Size	Hit Count	Total Norm	Total
No Reads

droRho1

TCACCC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATTTT-GTTTGCAGGAGCTGATTTATCACAGCGTGGCCGCCATCCTGATCCTGGCCTCGTCCAC	Size	Hit Count	Total Norm	Total
No Reads

droFic1

-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTGCAGGAGCTGATCTACCACAGCGTGGCCGCCATCCTGATCCTGACCTCGTCCAC	Size	Hit Count	Total Norm	Total
No Reads

droKik1

CCTGCCTCACGTCGCTGAGTACGGGTGGAATTATAGCAAAGACGATTTACGTGAGTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------	Size	Hit Count	Total Norm	Total
No Reads

droAna3

CCTGTCTCACCTCGCTGAGCACCGGAGGCATTATTGCCAAGACGATTTATGTACGTTCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGATAGCTTAA---------TGAAACTG-----------------T-------------------------------ACTCACCCTTCT-G--------------------------T-T---GACCC-TTCTTCAGGAGCTGATCTACCACAGCGTGGCTGCCATCCTGCTGCTGGCCTCCTCCAT	Size	Hit Count	Total Norm	Total	M044 Female-body	M058 Embryo	V039 Embryo	V055 Head	V105 Male-body	V106 Head
.......CACCTCGCTGAGCACCGGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	2.00	2	0	2	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTACCACAGCGTGGCTGCC.......................	22	1	1.00	1	0	1	0	0	0	0
.......CACCTCGCTGAGCACCGGAGGA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
.......CACCTCGCTGAGCACCGGAGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	1	0	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTGATCTACCACAGCGTGGCTG.........................	25	1	1.00	1	0	1	0	0	0	0
.........CCTCGCTGAGCACCGGAGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	1	0	0	0	0

droBip1

CCTGTCTCACCTCGCTGAGCACGGGAGGCATCATTGCCAAGACGATTTATGTACGTTCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCGATAGTTAAG---------AGAAACTG-----------------T-------------------------------ACTCACCTATTT-G--------------------------T-T---AATCC-TCTTCCAGGAGCTGATCTACCACAGCGTAGCTGCTATTCTGCTGCTGGCCTCCTCCAT	Size	Hit Count	Total Norm	Total
No Reads

dp5

CCTGCCTCACCTCCCTCAGCACGGGGGGCATCATCGCCAAGACGATTTACGTGAGTGCCGCAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCTTGCATTGATCTTTGCCATGTTT-TCATTGG-GCCC-GTATTGG--TTGTA---------------------------------------------T-TATTGCAGGAGCTGATCTACCACAGCGTCGCTGCCATACTGATCCTGGCCGCATCCAT	Size	Hit Count	Total Norm	Total	M022 Male-body	M040 Female-body	M059 Embryo	M062 Head	V043 Embryo	V051 Head	V112 Male-body	SRR902010 Ovary	SRR902011 Testis	SRR902012 CNS imaginal disc
...................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGG--TTGTA---------------------------------------------T-TATTGCAGGAGC..............................................	24	2	21.00	42	0	0	0	0	0	0	7	0	35	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................TGG--TTGTA---------------------------------------------T-TATTGCAGGAGCTGATC.........................................	26	2	19.00	38	0	3	0	0	0	0	14	0	21	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................TGG--TTGTA---------------------------------------------T-TATTGCAGGAGCTGA...........................................	24	2	7.00	14	0	1	0	0	0	0	2	0	11	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTA---------------------------------------------T-TATTGCAGGAGCTGATCTACC.....................................	27	2	6.00	12	0	2	0	1	0	0	5	1	3	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTA---------------------------------------------T-TATTGCAGGAGCTGATCTAC......................................	26	2	6.00	12	0	0	0	0	0	0	6	0	6	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TTGG--TTGTA---------------------------------------------T-TATTGCAGGAGCTGA...........................................	25	2	5.50	11	0	0	0	0	0	0	0	0	11	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TTGG--TTGTA---------------------------------------------T-TATTGCAGGAGCTGATC.........................................	27	2	5.50	11	0	0	0	0	0	0	0	0	11	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGG--TTGTA---------------------------------------------T-TATTGCAGGAGCTG............................................	26	2	3.50	7	0	0	0	0	0	0	1	0	6	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTA---------------------------------------------T-TATTGCAGGAGCTGATC.........................................	23	2	3.00	6	0	2	0	0	0	0	1	0	3	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGG--TTGTA---------------------------------------------T-TATTGCAGGAG...............................................	23	2	3.00	6	0	0	0	0	0	0	0	0	6	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TA---------------------------------------------T-TATTGCAGGAGCTGATCTACCA....................................	25	2	2.50	5	0	0	0	0	0	0	0	0	5	0
................................................................................................................................................................................................................................................................................................................................................................................................................................C-GTATTGG--TTGTA---------------------------------------------T-TATTGCAGGAGC..............................................	26	2	2.50	5	0	0	0	0	0	0	0	0	5	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTGG--TTGTA---------------------------------------------T-TATTGCAGGAGC..............................................	25	2	2.50	5	0	0	0	0	0	0	0	0	5	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGG--TTGTA---------------------------------------------T-TATTGCAGGAGC..............................................	23	2	2.50	5	0	0	0	0	0	0	0	0	5	0
...................................................................................................................................................................................................................................................................................................................................................................................................TGATCTTTGCCATGTTT-TCATTGG-GC..........................................................................................................................	26	2	2.50	5	0	0	0	0	0	0	0	0	5	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................TGTA---------------------------------------------T-TATTGCAGGAGCTGATCTACCA....................................	27	2	2.00	4	0	1	0	0	0	0	0	3	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCACAGCGTCGCTGCCATACTGATC..............	27	2	2.00	4	0	0	0	0	0	0	1	0	3	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................TGG--TTGTA---------------------------------------------T-TATTGCAGGAGC..............................................	21	2	2.00	4	0	0	0	0	0	0	0	0	4	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGG--TTGTA---------------------------------------------T-TATTGCAGGAGCTGA...........................................	27	2	2.00	4	0	0	0	0	0	0	1	0	3	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TTGG--TTGTA---------------------------------------------T-TATTGCAGGAGCTG............................................	24	2	1.50	3	0	0	0	0	0	0	1	0	2	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TTGG--TTGTA---------------------------------------------T-TATTGCAGGAGC..............................................	22	2	1.50	3	0	0	0	0	0	0	0	0	3	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................TGG--TTGTA---------------------------------------------T-TATTGCAGGAGCTGAT..........................................	25	2	1.50	3	0	0	0	0	0	0	1	0	2	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................TA---------------------------------------------T-TATTGCAGGAGCTGATCTACC.....................................	24	2	1.50	3	0	0	0	0	0	0	3	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCACAGCGTCGCTGCCATACTGATCC.............	28	2	1.50	3	0	1	0	0	0	0	0	0	2	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TTGG--TTGTA---------------------------------------------T-TATTGCAGGAGCTGAT..........................................	26	2	1.50	3	0	0	0	0	0	0	0	0	3	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCACAGCGTCGCTGCCATACTG.................	24	2	1.00	2	0	1	0	0	0	0	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGG--TTGTA---------------------------------------------T-TATTGCAGGAGCTGATC.........................................	29	2	1.00	2	0	0	0	0	0	0	2	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGCCATACTGATCCTGGCCGC......	24	2	1.00	2	0	2	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TTGG--TTGTA---------------------------------------------T-TATTGCAGGAGCT.............................................	23	2	1.00	2	0	0	0	0	0	0	0	0	2	0
...............TCAGCACGGGGGGCATCATC......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	2	1.00	2	0	1	0	0	0	0	1	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................TGATCTTTGCCATGTTT-TCATTGG-G...........................................................................................................................	25	2	1.00	2	0	0	0	0	0	0	0	0	2	0
...................................................................................................................................................................................................................................................................................................................................................................................................TGATCTTTGCCATGTTT-TCATTGG-GCCC-.......................................................................................................................	28	2	1.00	2	0	2	0	0	0	0	0	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTGG--TTGTA---------------------------------------------T-TATTGCAGGAG...............................................	24	2	1.00	2	0	0	0	0	0	0	0	0	2	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGG--TTGTA---------------------------------------------T-TATTGCAGGA................................................	22	2	1.00	2	0	0	0	0	0	0	0	0	2	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTGG--TTGTA---------------------------------------------T-TATTGCAGGAGCTC............................................	27	2	1.00	2	0	0	0	0	0	0	0	0	2	0
...............TCAGCACGGGGGGCATCATCGC....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	2	1.00	2	0	2	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................TGG--TTGTA---------------------------------------------T-TATTGCAGGAGCTG............................................	23	2	1.00	2	0	1	0	0	0	0	0	0	1	0
..................................CGCCAAGACGATTTACGTGAGTGCCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	2	1.00	2	0	0	0	0	0	0	2	0	0	0
..TGCCTCACCTCCCTCAGCACGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	23	2	1.00	2	0	0	0	0	0	0	0	0	2	0
...............................................TACGTGAGTGCCGCAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCTT..........................................................................................................................................................	22	2	1.00	2	0	1	0	0	0	0	1	0	0	0
..................................CGCCAAGACGATTTACGTGAGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	2	1.00	2	0	0	0	0	0	0	0	0	2	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTA---------------------------------------------T-TATTGCAGGAGCTGATCTACCA....................................	28	2	1.00	2	0	0	0	0	0	0	0	0	2	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................TGG--TTGTA---------------------------------------------T-TATTGCAGGAGCTGATCA........................................	27	2	1.00	2	0	1	0	0	0	0	0	0	1	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTACCACAGCGTCGCTGC........................	21	2	1.00	2	0	2	0	0	0	0	0	0	0	0
...............TCAGCACGGGGGGCATCATCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	21	2	1.00	2	0	1	0	0	0	0	1	0	0	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCAGGAGCTGATCTACCACAGCGTCGC...........................	28	2	1.00	2	0	0	0	0	0	0	2	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGCAGGAGCTGATCTACC.....................................	21	2	0.50	1	0	0	0	0	0	0	1	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................CC-GTATTGG--TTGTA---------------------------------------------T-TATTGCAGGAGC..............................................	27	2	0.50	1	0	0	0	0	0	0	0	0	1	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGCAGGAGCTGATCTAC......................................	20	2	0.50	1	0	0	0	0	0	0	1	0	0	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCTGATCTACCACAGCGTCC............................	22	2	0.50	1	0	0	0	0	0	0	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................TGTA---------------------------------------------T-TATTGCAGGAGCTGATCTACC.....................................	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................TGTA---------------------------------------------T-TATTGCAGGAGCTGATCTAC......................................	25	2	0.50	1	0	0	0	0	0	0	1	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTA---------------------------------------------T-TATTGCAGGAGCTGA...........................................	21	2	0.50	1	0	0	0	0	0	0	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................................................................TTGATCTTTGCCATGTTT-TCATTGG-GCCC-.......................................................................................................................	29	2	0.50	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCACAGCGTCGCTGCCATACT..................	23	2	0.50	1	0	0	0	0	0	0	0	0	1	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCACAGCGTCGCTGCCATACTGA................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................TGTTT-TCATTGG-GCCC-GTATTGG--T.............................................................................................................	24	2	0.50	1	0	0	0	0	0	0	0	0	1	0
..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCCATACTGATCCTGGCCGCAT....	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCGCTGCCATACTGATCCTGGCCG.......	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................CATGTTT-TCATTGG-GCCC-GTATTGG--..............................................................................................................	25	2	0.50	1	0	0	0	0	0	0	1	0	0	0
.............................................TTTACGTGAGTGCCGCAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCTTG.........................................................................................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
....................................................GAGTGCCGCAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCTTGCATT.....................................................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...................CACGGGGGGCATCATCGCCAAGACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	2	0.50	1	0	0	0	0	0	0	1	0	0	0
...............TCAGCACGGGGGGCATCATCGCCAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	2	0.50	1	0	0	0	0	0	0	1	0	0	0
........................................GACGATTTACGTGAGTGCCG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	2	0.50	1	0	0	0	0	0	0	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTACCACAGCGTCGCTGCCATACTG.................	28	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTA---------------------------------------------T-TATTGCAGGAGCTGAT..........................................	22	2	0.50	1	0	0	0	0	0	0	0	0	1	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGCTGCCATACTGATCCTGGC.........	21	2	0.50	1	0	0	0	0	0	0	0	0	1	0
...................................................................................................................................................................................................................................................................................................................................................................................................TGATCTTTGCCATGTTT-TCATTG..............................................................................................................................	23	2	0.50	1	0	1	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................TGG--TTGTA---------------------------------------------T-TATTGCAGG.................................................	18	2	0.50	1	0	0	0	0	0	0	0	0	1	0
..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATACTGATCCTGGCCGCATC...	20	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...............TCAGCACGGGGGGCATCATCGCCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...............TCAGCACGGGGGGCATCATCGCCA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.................................TCGCCAAGACGATTTACGTGAGTGCC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................TCATTGG-GCCC-GTATTGG--TTGTA---------------------------------------------T-T.........................................................	25	2	0.50	1	0	0	0	0	0	0	1	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................TGG--TTGTA---------------------------------------------T-TATTGCAGGAGCTGATT.........................................	26	2	0.50	1	0	0	0	0	0	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCACAGCGTCGCTGCCATACTGAT...............	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0
..............................................TTACGTGAGTGCCGCAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCT...........................................................................................................................................................	22	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGCAGGAGCTGATCTACCACA..................................	24	2	0.50	1	0	0	0	0	0	0	1	0	0	0
...............TCAGCACGGGGGGCATCATCGCCAAGAC..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	28	2	0.50	1	0	0	0	0	0	0	1	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGG--TTGTA---------------------------------------------T-TATTGCAGGAGCT.............................................	25	2	0.50	1	0	0	0	0	0	0	1	0	0	0
.................................TCGCCAAGACGATTTACGTGAGTGCCGCA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	29	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...........................................................................................................................................................................................................................................................................................................................................................................................................................................TTGTA---------------------------------------------T-TATTGCAGGAGCTGATCT........................................	24	2	0.50	1	0	0	0	0	0	0	1	0	0	0
...................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGG--TTGTA---------------------------------------------T-TATTGCAGAGC...............................................	23	2	0.50	1	0	0	0	0	0	0	1	0	0	0
.................AGCACGGGGGGCATCATCGCCAAGA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	25	2	0.50	1	0	0	0	0	0	0	0	0	1	0
.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTCGCTGCCATACTGATCCTGGC.........	25	2	0.50	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACCACAGCGTCGCTGCCATAC...................	22	2	0.50	1	0	0	0	0	0	0	0	0	1	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGCAGGAGCTGATCTACCACAGC................................	26	2	0.50	1	0	0	0	0	0	0	1	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGCAGGAGCTGATCTACCACAGCGT..............................	28	2	0.50	1	0	0	0	0	0	0	1	0	0	0
...............................................TACGTGAGTGCCGCAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCCTTGC........................................................................................................................................................	24	2	0.50	1	0	1	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................TTGCCATGTTT-TCATTGG-GCCC-GTAT...................................................................................................................	26	2	0.50	1	0	1	0	0	0	0	0	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAGGAGCTGATCTACCACAGC................................	25	2	0.50	1	0	0	0	0	0	0	1	0	0	0
................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCATACTGATCCTGGCCGC......	19	2	0.50	1	0	1	0	0	0	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATTGCAGGAGCTGATCTACCA....................................	22	2	0.50	1	0	0	0	0	0	0	1	0	0	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGG--TTGTA---------------------------------------------T-TATTGCAGGAG...............................................	22	2	0.50	1	0	0	0	0	0	0	0	0	1	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................TTGG--TTGTA---------------------------------------------T-TATTGCAGGAG...............................................	21	2	0.50	1	0	0	0	0	0	0	0	0	1	0

droPer2

CCTGCCTCACCTCCCTCAGCACGGGGGGCATCATCGCCAAGACGATTTACGTGAGTGGCGCAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCCTTGCATTGATCTTTGCCATGTTT-TGATTGG-GCCC-GTATTGG--TTGTA---------------------------------------------T-TATTGCAGGAGCTGATCTACCACAGCGTCGCTGCCATACTGATCCTGGCCGCATCCAT	Size	Hit Count	Total Norm	Total	M021 Embryo	M042 Female-body	V042 Embryo	V050 Head	V057 Head	V111 Male-body
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACCACAGCGTCGCTGCC.......................	19	1	1.00	1	0	1	0	0	0	0
........................................GACGATTTACGTGAGTGGCGCAAG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GC.............................................................................................................................................................	26	1	1.00	1	0	0	1	0	0	0

droWil2

CCTGTCTGACATCGCTCAGCACTGGCGGCATTATAGCCAAAACCATTTATGTAAGTTCAAATG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G------------------------------------------------TCTAACAATTCA-GATTCAGAATATTAATGAGTTTG----G-----AATTT-CTTTGCAGGAGCTGATCTATCACAGCATTGCGGCCATATTGCTTTTGGCTTCCTCAAC	Size	Hit Count	Total Norm	Total	M020 Head	M045 Female-body	V117 Male-body	V118 Embryo	V119 Head
.........CATCGCTCAGCACTGGCGGC............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	3.00	3	0	0	2	1	0
............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATCTATCACAGCATTGCGGCC.......................	22	1	2.00	2	0	1	1	0	0
.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGAGTTTG----G-----AATTT-CTTTGCA...................................................	23	1	1.00	1	0	0	0	1	0
..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTGATCTATCACAGCATTGCGGCCAT.....................	26	1	1.00	1	0	1	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGAGTTTG----G-----AATTT-CTTTGC....................................................	21	1	1.00	1	0	0	0	1	0
.......GACATCGCTCAGCACTGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	1	0	0	0

droVir3

CGTGCCTCACATCGCTGAGCACGGGCGGGCTCATCGCCAAGACAATCTATGTAAGTGCT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TAGCTTGACTGCTGAATTGAAG---CC-------CGAACCTGAA-----------ATCGAAAACTA-AAT-GTTGACAAAT---T-------------------------------T---TTTGA-ATTTACAGGAGCTGATCTATCATAGTGTTGCGGCCATACTGCTGCTCGCCTCGTCCGT	Size	Hit Count	Total Norm	Total	M027 Male-body	M028 Head	M047 Female-body	M061 Embryo	SRR060654 Ovary	SRR060655 Testis	SRR060656 Ovary	SRR060657 Testis	SRR060658 Ovary	SRR060659 Testis	SRR060660 Ovary	SRR060661 Embryo	SRR060662 Embryo	SRR060663 Embryo	SRR060664 Male-body	SRR060665 Female-body	SRR060666 Male-body	SRR060667 Female-body	SRR060668 Male-body	SRR060669 Female-body	SRR060670 Testis	SRR060671 Male-body	SRR060672 Female-body	SRR060673 Ovary	SRR060674 Ovary	SRR060675 Ovary	SRR060676 Ovary	SRR060677 Ovary	SRR060678 Testis	SRR060679 Testis	SRR060680 Testis	SRR060681 Testis	SRR060682 Embryo	SRR060683 Testis	SRR060684 Embryo	SRR060685 Embryo	SRR060686 Embryo	SRR060687 Embryo	SRR060688 Ovary	SRR060689 Testis	SRR1106712 embryo_0-2h	SRR1106713 embryo_0-2h	SRR1106714 embryo_2-4h	SRR1106715 embryo_4-6h	SRR1106716 embryo_4-6h	SRR1106717 embryo_6-8h	SRR1106718 embryo_6-8h	SRR1106719 embryo_8-10h	SRR1106720 embryo_8-10h	SRR1106721 embryo_10-12h	SRR1106722 embryo_10-12h	SRR1106723 embryo_12-14h	SRR1106724 embryo_12-14h	SRR1106725 embryo_14-16h	SRR1106726 embryo_14-16h	SRR1106727 larvae	SRR1106728 larvae	SRR1106729 mixed whole adult body	SRR1106730 embryo_16-30h	V047 Embryo	V053 Head	V116 Male-body	GSM1528803 follicle cells
.......CACATCGCTGAGCACGGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	19	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CGGCCATACTGCTGCTCGCCTCGTC...	25	1	3.00	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATCATAGTGTTGCGGCC.......................	19	1	2.00	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......TCACATCGCTGAGCACGGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0
......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTTGCGGCCATACTGC................	19	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATACTGCTGCTCGCCTCGTCC..	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATCTATCATAGTGTTGCG..........................	22	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGATCTATCATAGTGTTGC...........................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
......................................................................................................................................................................................................................................................................................................................................................................TGACTGCTGAATTGAAG---CC-------CG....................................................................................................................................................	21	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
..TGCCTCACATCGCTGAGCACGG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	22	1	1.00	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
.......CACATCGCTGAGCACGGG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0
............................................................................................................................................................................................................................................................................................................................................................................CTGAATTGAAG---CC-------CC....................................................................................................................................................	15	7	0.43	3	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	3	0	0	0	0	0
..................................CGCCAAGACAATCTATGAGC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	11	0.09	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

droMoj3

CGTGTCTCACATCGCTAAGCACGGGCGGACTCATCGCCAAGACAATCTACGTGAGTGAACAA-AATATTACGATAG---------------------------TTCTAATTTGAGCTGCGATTGCAAATGTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TT-TAATCAA-CC----------------------TCAAT---------------------TGGG-CT---ATTCC-ATTTATAGGAGCTGATCTATCACTCTGTTGCCGCCATACTGTTGCTCGTCTCGTCCGC	Size	Hit Count	Total Norm	Total	M046 Female-body	V041 Embryo	V049 Head	V056 Head	M060 Embryo	V110 Male-body
.........................CGGACTCATCGCCAAGACAATCTA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	24	1	1.00	1	0	0	0	0	0	1
.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCACTCTGTTGCCGCCATACT..................	22	1	1.00	1	1	0	0	0	0	0
...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGG-CT---ATTCC-ATTTATAG..................................................	19	1	1.00	1	1	0	0	0	0	0
......TCACATCGCTAAGCACGGGC...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	20	1	1.00	1	0	0	0	0	0	1

droGri2

CGTGCATCACATCGCTGAGCACGGGTGGCCTCATCGCCAAGACAATCTATGTAAGTGTGATTT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GAA------------TTTAATTGATCTTGATTATGATTATGATTTG-TAACTATAAC-GTTGATCAACT---------------------------------------TTCG-ATTCACAGGAGCTGATCTATCATAGCGTTGCGGTCATTCTGCTGCTCGCCTCGTCCAT	Size	Hit Count	Total Norm	Total	M041 Female-body	V109 Male-body
..................GCACGGGTGGCCTCATCG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................	18	1	1.00	1	1	0
....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCGTTGCGGTCATTCTGCTG..............	23	1	1.00	1	0	1

der_366

scaffold_4690:3712290-3712432 +

Candidate

Unknown

Predicted structure

Flybase annnotation

Sense Strand Reads

Anti-sense strand reads

Re-alignment of all predicted orthologs

Re-alignment of all predicted orthologs with sRNA reads