ID:

der_335

 Coordinate:

scaffold_4644:2002693-2002776 +

 Confidence:

Candidate

 Type:

Unknown

 [View on UCSC Genome Browser {Cornell Mirror}]
Legend: mature star mismatch in alignment mismatch in read

Predicted structure

-17.7 -17.7 -17.5

Flybase annnotation

exon [dere_GLEANR_12956:1]; CDS [Dere\GG12910-cds]; CDS [Dere\GG12910-cds]; exon [dere_GLEANR_12956:2]; intron [Dere\GG12910-in]

No Repeatable elements found

Sense Strand Reads

------------------------------------------########------------------------------------------------------------------------------------##################################################
AATCATTGTTGGAAGACAAGCCGCACAAAGCACACACCAAAAATGAGCGGGTGAGTTGGGTGGAAAAGCCCTTTTCCTCGGTGTTTTCCGCGATCCTAACCCATCGCCCATCGCCATCGCCGGATCTCTTCCAGACAAGCAGACATCGCCCTCATCGGCCTGGCCGTCATGGGCCAAAACCTGA
**************************************************(((.(((((((((((((..((........))..)))))))....)))))).)))...................************************************************************* 		Read size # Mismatch Hit Count Total Norm Total V108
head
 V107
male body		 GSM1528801
follicle cells		 M055
female body
 M057
embryo
 V040
embryo
 V060
head
...................................................................................................CCCATCGCCCATCGCCATCGCCGG............................................................. 24 0 1 16.00 16 0 0 13 3 0 0 0
...................................................................................................CCCATCGCCCATCGCCATCG................................................................. 20 0 1 7.00 7 1 1 0 5 0 0 0
..................................................................................................ACCCATCGCCCATCGCCATC.................................................................. 20 0 1 6.00 6 3 1 0 2 0 0 0
...................................................................................................CCCATCGCCCATCGCCCTCGCCGG............................................................. 24 1 1 5.00 5 0 0 5 0 0 0 0
....ATTGTTGGAAGACAAGCCGCACAAAGCA........................................................................................................................................................ 28 0 1 3.00 3 0 1 2 0 0 0 0
..............................CACACACCAAAAATGAGC........................................................................................................................................ 18 0 1 3.00 3 2 0 0 1 0 0 0
..................................................................................................ACCCATCGCCCATCGCCATCG................................................................. 21 0 1 3.00 3 3 0 0 0 0 0 0
.....................................................................................................................................GACAAGCAGACATCGCCCT................................ 19 0 1 2.00 2 1 0 0 0 0 1 0
...........................AAGCACACACCAAAAATG........................................................................................................................................... 18 0 1 2.00 2 1 0 0 0 0 1 0
................................................................................................................................................ATCGCCCTCATCGGCCTGGCC................... 21 0 1 2.00 2 0 2 0 0 0 0 0
............................................................................................................................................AGACATCGCCCTCATCGGCCTGGCC................... 25 0 1 2.00 2 1 0 0 0 1 0 0
...............................................................................................................................................CATCGCCCTCATCGGCCTGGCCGTC................ 25 0 1 2.00 2 0 2 0 0 0 0 0
...........GAAGACAAGCCGCACAAAGCACACACC.................................................................................................................................................. 27 0 1 2.00 2 1 1 0 0 0 0 0
.......GTTGGAAGACAAGCCGCACAAAGC......................................................................................................................................................... 24 0 1 2.00 2 0 1 0 0 1 0 0
...........GAAGACAAGCCGCACAAAGCACACA.................................................................................................................................................... 25 0 1 1.00 1 0 0 0 0 0 1 0
.............................GCACACACCAAAAATGAG......................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0
................................................................................................................................................ATCGCCCTCATCGGCCTGGCCGT................. 23 0 1 1.00 1 1 0 0 0 0 0 0
...........................................................................................................................................CAGACATCGCCCTCATCGGCCT....................... 22 0 1 1.00 1 0 1 0 0 0 0 0
......................................................................................................ATCGCCCATCGCCATCGCCGG............................................................. 21 0 1 1.00 1 0 1 0 0 0 0 0
................................................................................................................................................ATCGCCCTCATCGGCCTGGCCGTCATG............. 27 0 1 1.00 1 0 1 0 0 0 0 0
..........................................................................................................................................GCAGACATCGCCCTCATCGGCCTGGC.................... 26 0 1 1.00 1 0 0 0 1 0 0 0
...................................................................................................CCCATCGCCCATCTCCATCGCCGG............................................................. 24 1 1 1.00 1 0 0 1 0 0 0 0
..............................................GCGGGTGAGTTGGGTGGA........................................................................................................................ 18 0 1 1.00 1 0 0 0 0 0 0 1
.....................................................................................CTCCGCGATCCTAACCCATCGCCCAT......................................................................... 26 1 1 1.00 1 0 0 0 1 0 0 0
............................AGCACACACCAAAAATGAG......................................................................................................................................... 19 0 1 1.00 1 0 1 0 0 0 0 0
........................................................................................................................................AAGCAGACATCGCCCTCAT............................. 19 0 1 1.00 1 1 0 0 0 0 0 0
.......GTTGGAAGACAAGCCGCACAAA........................................................................................................................................................... 22 0 1 1.00 1 0 0 0 1 0 0 0
...................................................................................................................................................GCCCTCATCGGCCTGGCCGTCCTG............. 24 1 1 1.00 1 0 0 0 0 0 1 0
.........................CAAAGCACACACCAAAAATGAGC........................................................................................................................................ 23 0 1 1.00 1 0 1 0 0 0 0 0
....................................................................................................................................GGACAAGCAGACATCGCCCTC............................... 21 1 1 1.00 1 0 0 0 0 1 0 0
............................................................................................................................................AGACATCGCCCTCATCGGCCT....................... 21 0 1 1.00 1 0 0 0 1 0 0 0
................................................................................................TAACCCATCGCCCATCGCCATC.................................................................. 22 0 1 1.00 1 0 0 0 0 0 0 1
.......GTTGGAAGACAAGCCGCAC.............................................................................................................................................................. 19 0 1 1.00 1 1 0 0 0 0 0 0
...................................................................................................................................CGGACAAGCAGACATCGCCCTCATC............................ 25 1 1 1.00 1 0 0 0 1 0 0 0
...................................................................................................CCCATCGGCCATCGCCATCGCCGG............................................................. 24 1 1 1.00 1 0 0 1 0 0 0 0
............................................................................................................................................AGACATCGCCCTCATCGGCCTG...................... 22 0 1 1.00 1 0 0 0 1 0 0 0
......................................................................................................ATCGCCCATCGCCATCGCCGGATCTCT....................................................... 27 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................................TATCCCAGACAAGCAAACATCGC................................... 23 3 1 1.00 1 0 0 0 0 0 1 0
......................GCACAAAGCACACACCAAAAATGAGCG....................................................................................................................................... 27 0 1 1.00 1 0 1 0 0 0 0 0
..................................................................................................................................................CGCCCTCATCGGCCTGGCCGTCATG............. 25 0 1 1.00 1 0 1 0 0 0 0 0
..................................................................................................................................................CTACCTCATCGGCCTGGCCGTCATGC............ 26 3 1 1.00 1 0 0 0 0 1 0 0
...................................................................................................CTCATCGCCCATCGCCATCGCCGG............................................................. 24 1 1 1.00 1 1 0 0 0 0 0 0
........................................................................................................................................AAGCAGACATCGCCCTCATCGGCCTGG..................... 27 0 1 1.00 1 1 0 0 0 0 0 0
...................................ACCAAAAATGAGCGGGTGAGTTGG............................................................................................................................. 24 0 1 1.00 1 0 0 0 1 0 0 0
...............................AAACACCAAAAATGAGCGG...................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0
....................................................................................................................................................................CGTCATGGGCCAAAACCCG. 19 1 1 1.00 1 0 0 0 0 0 1 0
..................................................................................................ACCCATCGCCCATCGCCA.................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0
..................................................GTGAGTTGGGTGGAAAAGCC.................................................................................................................. 20 0 1 1.00 1 0 1 0 0 0 0 0
.........................................................................................................................................................ATCGGCCTGGCCGTCATGGGCC......... 22 0 1 1.00 1 0 0 0 1 0 0 0
...................................................................................................CCCATCGCCCATCGCCATC.................................................................. 19 0 2 1.00 2 1 0 0 1 0 0 0
.........................................................................................................................................AGCAGACATCGCCCTCATC............................ 19 0 1 1.00 1 1 0 0 0 0 0 0
..............................................................................................................................................ACATCGCCCTCATCGGCCTGGCC................... 23 0 1 1.00 1 0 0 0 0 1 0 0
......................................................................................................................................ACAAGCAGACATCGACCTCATC............................ 22 1 1 1.00 1 1 0 0 0 0 0 0
.............................GCACACACCAAAACTGAGCG....................................................................................................................................... 20 1 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................................CATCGCCCTCATCGGCCTGGCCGTCAT.............. 27 0 1 1.00 1 0 0 0 0 1 0 0
.........................................................................................................................................AGCAGACATCGCCCTCATCGGCCTGGCC................... 28 0 1 1.00 1 0 0 0 0 1 0 0
...........................AAGCACACACCAAAAATGAGCG....................................................................................................................................... 22 0 1 1.00 1 0 1 0 0 0 0 0
......................GCACAAAGCACACACCAAAAATGAGC........................................................................................................................................ 26 0 1 1.00 1 0 0 0 0 1 0 0
.............AGACAAGCCGCACAAAGCAC....................................................................................................................................................... 20 0 1 1.00 1 0 0 0 0 1 0 0
..............................CTCACACCAAAAATGAGCGGG..................................................................................................................................... 21 1 1 1.00 1 0 0 0 0 1 0 0
........................................................................................................................................AAGCAGACATCGCCCTCATC............................ 20 0 1 1.00 1 0 0 0 0 1 0 0
...................................ACCAAAAATGAGCGGGTG................................................................................................................................... 18 0 1 1.00 1 0 0 0 1 0 0 0
.........................................................................................................................................ATCAGACATCGCCCTCATCGGCCTGGC.................... 27 1 1 1.00 1 0 0 0 0 1 0 0
.......GTTGGAAGACAAGCCGCACAAAG.......................................................................................................................................................... 23 0 1 1.00 1 0 1 0 0 0 0 0
.........TGGAAGACAAGCCGCACAAAGCACA...................................................................................................................................................... 25 0 1 1.00 1 0 1 0 0 0 0 0
............AAGACAAGCCGCACAAAGC......................................................................................................................................................... 19 0 1 1.00 1 1 0 0 0 0 0 0
...............................ACACACCAAAAATGAGCG....................................................................................................................................... 18 0 1 1.00 1 1 0 0 0 0 0 0
...............................................................................................................................................CATCGCCCTCATCGTCCTGGCCGTCATG............. 28 1 1 1.00 1 1 0 0 0 0 0 0
............AAGACAAGCCGCACAAAG.......................................................................................................................................................... 18 0 1 1.00 1 0 0 0 0 0 1 0
...................................................................................................................................................GCCCTCATCGGCCTGGCCGTCATT............. 24 1 1 1.00 1 0 0 0 0 0 1 0
....ATTGTTGGAAGACAAGCCG................................................................................................................................................................. 19 0 1 1.00 1 0 0 0 1 0 0 0
................................................................................................................................................ATCGCCCTCATCGGCCTGGCCGTC................ 24 0 1 1.00 1 1 0 0 0 0 0 0
.............................GCACACACCAAAAATGAGC........................................................................................................................................ 19 0 1 1.00 1 1 0 0 0 0 0 0
.......................................................................................................................................CAAGCAGACATCGCCCTCATCGGCCT....................... 26 0 1 1.00 1 0 1 0 0 0 0 0
...................................................................................................CCCATCGCCCCTCGCCATCGCCGG............................................................. 24 1 1 1.00 1 0 0 1 0 0 0 0
............................AGCACACACCAACAATGAG......................................................................................................................................... 19 1 1 1.00 1 1 0 0 0 0 0 0
......................GCACAAAGCACACACCAAAAATGAGCGG...................................................................................................................................... 28 0 1 1.00 1 0 1 0 0 0 0 0
.................................................................................................AACCCATCGCCCATCGCCATCG................................................................. 22 0 1 1.00 1 0 1 0 0 0 0 0
..............................CACACACCAAAATTGAGC........................................................................................................................................ 18 1 2 0.50 1 1 0 0 0 0 0 0
.......GTTGGAAGACAAGCCGCC............................................................................................................................................................... 18 1 2 0.50 1 0 0 0 0 0 0 1
...................................................................................................CCCATCGCCCATCGCCCTCG................................................................. 20 1 3 0.33 1 1 0 0 0 0 0 0
..................................CACCAAAAATGAGCGGACAAG................................................................................................................................. 21 3 5 0.20 1 0 1 0 0 0 0 0

Anti-sense strand reads

TTAGTAACAACCTTCTGTTCGGCGTGTTTCGTGTGTGGTTTTTACTCGCCCACTCAACCCACCTTTTCGGGAAAAGGAGCCACAAAAGGCGCTAGGATTGGGTAGCGGGTAGCGGTAGCGGCCTAGAGAAGGTCTGTTCGTCTGTAGCGGGAGTAGCCGGACCGGCAGTACCCGGTTTTGGACT
*************************************************************(((.(((((((((((((..((........))..)))))))....)))))).)))...................************************************************** 		Read size # Mismatch Hit Count Total Norm Total V040
embryo
 M055
female body
 M057
embryo
....................................................................................................................TGCGGCGTAGTGAAGGTCTG................................................ 20 3 6 0.17 1 0 1 0
............................................................................GTGCCACAAAAGGCAATAGG........................................................................................ 20 3 8 0.13 1 1 0 0
......................................................................................AGGCGCTAGGACTGCGTAC............................................................................... 19 3 12 0.08 1 1 0 0
..................TCGGGGTGTGTCGTGTGCGG.................................................................................................................................................. 20 3 17 0.06 1 0 0 1

Re-alignment of all predicted orthologs

Species Coordinate ID Alignment
droEre2 scaffold_4644:2002643-2002826 + der_335 AAT----CATTGTTGGA-AGACAAGCC-------GCACAAAGC----ACACACCAAAAATGAGCGGGTGAGTTGG--------GT---GGAAA-AGCCC------------------------------------TTTTCCTCGGTGTTTTCCGCGATCCTAACCC--------------------------------AT---------------------CGCCCATCG----CCATCGCC-------------------------GGATCTCTTCCAGACAAGCAGACATCGCCCTCATCGGCCTGGCCGTCATGGGCCAAAACCTGA
droYak3 X:6284834-6285010 - AAT----CATTGTTGGA-ACACAAACC-------GCACCAAGC----ACACACGAAACATGAGCGGGTGAGTTGC--------TG---TA-AAA-GCCC------------------------------------TTTTCCTCGGAGTTTTCCGCGATCCTAACCC--------------------------------AT---------------------GGCCC----------AACCCC-------------------------GGATCTCTTCCAGACAAGCGGACATCGCCCTCATCGGCCTGGCGGTCATGGGCCAAAACCTGA
droSec2 scaffold_10:1822849-1823023 + dse_755 AAT----CATTGTTGGA-ACACAAACC-------GCACGAAAA----ACACACAAAACATGAGCGGGTGAGTAGA--------GG---GA-AAT-GCCC------------------------------------TTTTCCCTGGAGTTTTCCGCGATCCTAA----------------------------------CGT---------------------CGCCC----------ATCCCC-------------------------GGATCTCTTCCAGACAAGCGGACATCGCCCTCATCGGTCTGGCCGTCATGGGCCAAAACCTAA
droSim2 x:1877244-1877418 + AAT----CATTGTTGGA-ACACAAACC-------GCACGAAAA----ACACACAAAACATGAGCGGGTGAGTAGA--------GT---GA-AAT-GCCC------------------------------------TTTTCCCTGGTGTTTTCCGCGATCCTAA----------------------------------CGT---------------------CGCCC----------ATCCCC-------------------------GGATCTCTTCCAGACAAGCGGACATCGCCCTCATCGGCCTGGCCGTCATGGGCCAAAACCTGA
dm3 chrX:2039400-2039572 + AAT----CATTGTTGGA-GCACAAACC---------ACAAAGA----ACACACGAAACATGAGCGGGTGAGTAGA--------GG---GA-AAT-TCTC------------------------------------TTTTCCCCGGAGTTTTCCGCGATCCTAA----------------------------------CGT---------------------CGCCC----------ATTTCC-------------------------GGATTTCTTCCAGACAAGCGGATATTGCCCTCATCGGCCTGGCCGTCATGGGCCAAAACCTGA
droEug1 scf7180000409093:76253-76439 - CTT----CATTGTTGAA-TTAGAAACC-------GCACGATAAGCACACACACTAAACATGAGCGGGTGAGTAAG--------AA---GA-GTTAGCCC------------------------------------TTTTC-GTTTTGTTTTTGT---T----------------TTCAA------------------TAT-----------TTTTTAATGAC---AATTT----TT-TTTGT-------------------------GGAT-TTTCGCAGACAAGCGGACATTGCTCTCATTGGCCTGGCCGTTATGGGCCAAAATCTGA
droBia1 scf7180000301760:2012875-2013071 + CCC----CAATACTGAA-AAAGA--TC-------G------AA----ACACACGAAACATGAGCGGGTGAGTAAG--------GG---GA-AATAGCCC------------------------------------TTCTC-GGGTT----------------------------GTCAAGTTGTTCATGTT--------------------TCTCGAATGTC---A-TG--T--TT-TTTGTGAGTTTCTCCTAATGCTTTCCC---GTTTCTTTGGCAGACAAGCGGACATTGCTCTCATCGGCCTGGCCGTCATGGGCCAGAACCTGA
droTak1 scf7180000415191:114622-114802 + AGCTCCACATTGCTGAA-ACAGAGACC-------G------AA----ACACACGAAACATGAGCGGGTGAGTAAG--------AG---GA-AGCGGCCC------------------------------------TTA-G---------------------------------------------------------------TTAATATTTTTGTAATGTC---A-TG--TTTTT-TTTGTGATTTTTTCC---------CCA---ATATTTTTTGCAGACAAGCGGACATTGCTCTCATCGGCCTGGCCGTCATGGGCCAGAATCTGA
droEle1 scf7180000491001:1576831-1577037 + AAA----CAATGCCGCAAACTAAATGCGAACCTTGCACGACAA----ACACACAAAACATGAGCGGGTGAGTAAG--------AGAG-GA-TATGGCCC------------------------------------T-------GCTTTTTTT----------------------TGCAAGTTCTTCTTGTTTCCTAACGAATGTTATTATTTT----------------------------------------AATTTTTTCATGTTTCTTATTCTGCAGACAAGCGGACATTGCACTCATCGGCCTAGCCGTCATGGGCCAAAATCTGA
droRho1 scf7180000779506:97684-97900 + AAA----TAATGCCGCAAACTGAATGCGCACCTTGCACACTTA----ACACACAAAACATGAGCGGGTAAGTAAG--------AGAG-GA-AATAGACC------------------------------------GTTT--------TTTTT---------TC------TTGTTTGCAAGATTC---TGTTTTCTAACGA---------------------A---TATTGGT--TT-TTATTTACTTTCT--TTATT-TTTTAT---GTTTTCTTTGCAGACAAGCGGACATTGCACTCATCGGCCTGGCCGTCATGGGCCAAAACCTGA
droFic1 scf7180000454072:3160010-3160172 + GG----------------AGACAGACT----CTAGCACAACAA----GCATACAAACCATGAGCGGGTGAGTTAA--------AG---GA-AAAGGACC------------------------------------TTT-GCTTTTGGTTTTCGTGTTTTCTAA----------------------------------TGG---------------------CTAAC----------A----A-------------------------AAAACTGTTATAGACAAGCGGACATTGCACTCATCGGACTGGCCGTCATGGGCCAGAACCTGA
droKik1 scf7180000302696:600985-601155 + AAT----TGCATTTGAG-ACAAAATAC-------TTGCAGAAA----AAACACACAAAATGAGCGGGTGAGTGGC--------GT---GG----------------------------------------------TTCCCTTGATGTTTTAAATGAAATGAAATCATT--------------GCCGTGTTTCCTTTT------------------------------------------------------------------------TGCCACCCAGAAAAGCCGATATCGCACTCATTGGCCTGGCTGTAATGGGTCAGAATCTCA
droAna3 scaffold_13117:5202277-5202436 + AA----------------------------------------A----GTACACACAAAATGAGCGGGTGAGTTGAACTGCAAGAGA--GA-GA----AAGCATGA---GATCATTAACCCTTTAACACCTGGATATTT-TATTAT--TTTTT---------------------------------------------TGT---------------------TG-----------------------------------------------TGTTTTGCAGAAAAGCTGATATTGCTCTGATTGGCCTGGCCGTAATGGGCCAGAATCTCA
droBip1 scf7180000396734:14389-14566 - AAT----TATTTTGTGA-AATAAAAAA-------ACAACAATT----ATACACA-AAAATGAGCGGGTAAGTTAA--------AAAATAA-AAAAAACCGCATGAAAAGATCA----------------------TTA-AACTTTGCATTTCCAAATTATTTG----------------------------------TAT---------------------TG-----------------------------------------------T-CTTTGCAGAAAAGCTGATATTGCTCTTATTGGCCTGGCCGTAATGGGCCAGAATCTCA
dp5 XL_group3a:1857429-1857481 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAAAAGCTGATATTGCACTTATTGGACTGGCCGTGATGGGCCAGAATCTCA
droPer2 scaffold_11:2829132-2829184 - -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAAAAGCTGATATTGCACTTATTGGACTGGCCGTGATGGGCCAGAATCTCA
droWil2 scf2_1100000004909:11907077-11907129 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAAAGCTGATATAGCCCTGATTGGATTGGCCGTAATGGGCCAAAATCTCA
droVir3 scaffold_12928:4771003-4771055 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAAAGCTGATATTGCACTGATCGGCCTGGCCGTAATGGGCCAAAATCTCA
droMoj3 scaffold_6308:158614-158666 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGAAAGCTGATATTGCACTCATTGGCCTGGCTGTCATGGGTCAAAATCTCA
droGri2 scaffold_14853:1646717-1646769 + -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGAAAGCTGATATTGCCCTCATTGGATTGGCTGTAATGGGTCAAAATCTAA

Re-alignment of all predicted orthologs with sRNA reads

Species Read alignment
droEre2
AAT----CATTGTTGGA-AGACAAGCC-------GCACAAAGC----ACACACCAAAAATGAGCGGGTGAGTTGG--------GT---GGAAA-AGCCC------------------------------------TTTTCCTCGGTGTTTTCCGCGATCCTAACCC--------------------------------AT---------------------CGCCCATCG----CCATCGCC-------------------------GGATCTCTTCCAGACAAGCAGACATCGCCCTCATCGGCCTGGCCGTCATGGGCCAAAACCTGASizeHit CountTotal NormTotalM055
Female-body		M057
Embryo		V060
Head		V040
Embryo		V107
Male-body		V108
Head		GSM1528801
follicle cells
...................................................................................................................................................................CCC--------------------------------AT---------------------CGCCCATCG----CCATCGCC-------------------------GG.............................................................24116.001630000013
...................................................................................................................................................................CCC--------------------------------AT---------------------CGCCCATCG----CCATCG..........................................................................................2017.0075000110
..................................................................................................................................................................ACCC--------------------------------AT---------------------CGCCCATCG----CCATC...........................................................................................2016.0062000130
........ATTGTTGGA-AGACAAGCC-------GCACAAAGC----A..........................................................................................................................................................................................................................................................................................2813.0030000102
..........................................C----ACACACCAAAAATGAGC..........................................................................................................................................................................................................................................................................1813.0031000020
..................................................................................................................................................................ACCC--------------------------------AT---------------------CGCCCATCG----CCATCG..........................................................................................2113.0030000030
.......................................................................................................................................................................................................................................................................................GACAAGCAGACATCGCCCT................................1912.0020001010
.......................................AAGC----ACACACCAAAAATG.............................................................................................................................................................................................................................................................................1812.0020001010
..................................................................................................................................................................................................................................................................................................ATCGCCCTCATCGGCCTGGCC...................2112.0020000200
..............................................................................................................................................................................................................................................................................................AGACATCGCCCTCATCGGCCTGGCC...................2512.0020100010
.................................................................................................................................................................................................................................................................................................CATCGCCCTCATCGGCCTGGCCGTC................2512.0020000200
...............GA-AGACAAGCC-------GCACAAAGC----ACACACC....................................................................................................................................................................................................................................................................................2712.0020000110
...........GTTGGA-AGACAAGCC-------GCACAAAGC----...........................................................................................................................................................................................................................................................................................2412.0020100100
...............GA-AGACAAGCC-------GCACAAAGC----ACACA......................................................................................................................................................................................................................................................................................2511.0010001000
.........................................GC----ACACACCAAAAATGAG...........................................................................................................................................................................................................................................................................1811.0010000010
..................................................................................................................................................................................................................................................................................................ATCGCCCTCATCGGCCTGGCCGT.................2311.0010000010
.............................................................................................................................................................................................................................................................................................CAGACATCGCCCTCATCGGCCT.......................2211.0010000100
......................................................................................................................................................................................................AT---------------------CGCCCATCG----CCATCGCC-------------------------GG.............................................................2111.0010000100
..................................................................................................................................................................................................................................................................................................ATCGCCCTCATCGGCCTGGCCGTCATG.............2711.0010000100
............................................................................................................................................................................................................................................................................................GCAGACATCGCCCTCATCGGCCTGGC....................2611.0011000000
..............................................................GCGGGTGAGTTGG--------GT---GGA...............................................................................................................................................................................................................................................1811.0010010000
........................................AGC----ACACACCAAAAATGAG...........................................................................................................................................................................................................................................................................1911.0010000100
..........................................................................................................................................................................................................................................................................................AAGCAGACATCGCCCTCAT.............................1911.0010000010
...........GTTGGA-AGACAAGCC-------GCACAAA.................................................................................................................................................................................................................................................................................................2211.0011000000
.....................................CAAAGC----ACACACCAAAAATGAGC..........................................................................................................................................................................................................................................................................2311.0010000100
..............................................................................................................................................................................................................................................................................................AGACATCGCCCTCATCGGCCT.......................2111.0011000000
................................................................................................................................................................TAACCC--------------------------------AT---------------------CGCCCATCG----CCATC...........................................................................................2211.0010010000
...........GTTGGA-AGACAAGCC-------GCAC....................................................................................................................................................................................................................................................................................................1911.0010000010
..............................................................................................................................................................................................................................................................................................AGACATCGCCCTCATCGGCCTG......................2211.0011000000
......................................................................................................................................................................................................AT---------------------CGCCCATCG----CCATCGCC-------------------------GGATCTCT.......................................................2711.0010000010
..................................GCACAAAGC----ACACACCAAAAATGAGCG.........................................................................................................................................................................................................................................................................2711.0010000100
....................................................................................................................................................................................................................................................................................................CGCCCTCATCGGCCTGGCCGTCATG.............2511.0010000100
..........................................................................................................................................................................................................................................................................................AAGCAGACATCGCCCTCATCGGCCTGG.....................2711.0010000010
...................................................ACCAAAAATGAGCGGGTGAGTTGG--------.......................................................................................................................................................................................................................................................2411.0011000000
..................................................................................................................................................................ACCC--------------------------------AT---------------------CGCCCATCG----CCA.............................................................................................1811.0011000000
..................................................................GTGAGTTGG--------GT---GGAAA-AGCC........................................................................................................................................................................................................................................2011.0010000100
...........................................................................................................................................................................................................................................................................................................ATCGGCCTGGCCGTCATGGGCC.........2211.0011000000
...................................................................................................................................................................CCC--------------------------------AT---------------------CGCCCATCG----CCATC...........................................................................................1921.0021000010
...........................................................................................................................................................................................................................................................................................AGCAGACATCGCCCTCATC............................1911.0010000010
................................................................................................................................................................................................................................................................................................ACATCGCCCTCATCGGCCTGGCC...................2311.0010100000
.................................................................................................................................................................................................................................................................................................CATCGCCCTCATCGGCCTGGCCGTCAT..............2711.0010100000
...........................................................................................................................................................................................................................................................................................AGCAGACATCGCCCTCATCGGCCTGGCC...................2811.0010100000
.......................................AAGC----ACACACCAAAAATGAGCG.........................................................................................................................................................................................................................................................................2211.0010000100
..................................GCACAAAGC----ACACACCAAAAATGAGC..........................................................................................................................................................................................................................................................................2611.0010100000
..................AGACAAGCC-------GCACAAAGC----AC.........................................................................................................................................................................................................................................................................................2011.0010100000
..........................................................................................................................................................................................................................................................................................AAGCAGACATCGCCCTCATC............................2011.0010100000
...................................................ACCAAAAATGAGCGGGTG.....................................................................................................................................................................................................................................................................1811.0011000000
...........GTTGGA-AGACAAGCC-------GCACAAAG................................................................................................................................................................................................................................................................................................2311.0010000100
.............TGGA-AGACAAGCC-------GCACAAAGC----ACA........................................................................................................................................................................................................................................................................................2511.0010000100
................A-AGACAAGCC-------GCACAAAGC----...........................................................................................................................................................................................................................................................................................1911.0010000010
...............................................ACACACCAAAAATGAGCG.........................................................................................................................................................................................................................................................................1811.0010000010
................A-AGACAAGCC-------GCACAAAG................................................................................................................................................................................................................................................................................................1811.0010001000
.....................................................................................................................................................................................................................................................................................................GCCCTCATCGGCCTGGCCGTCATT.............2411.0010001000
........ATTGTTGGA-AGACAAGCC-------G.......................................................................................................................................................................................................................................................................................................1911.0011000000
..................................................................................................................................................................................................................................................................................................ATCGCCCTCATCGGCCTGGCCGTC................2411.0010000010
.........................................GC----ACACACCAAAAATGAGC..........................................................................................................................................................................................................................................................................1911.0010000010
.........................................................................................................................................................................................................................................................................................CAAGCAGACATCGCCCTCATCGGCCT.......................2611.0010000100
..................................GCACAAAGC----ACACACCAAAAATGAGCGG........................................................................................................................................................................................................................................................................2811.0010000100
.................................................................................................................................................................AACCC--------------------------------AT---------------------CGCCCATCG----CCATCG..........................................................................................2211.0010000100
...........GTTGGA-AGACAAGCC-------GCC.....................................................................................................................................................................................................................................................................................................1820.5010010000
droYak3
AAT----CATTGTTGGA-ACACAAACC-------GCACCAAGC----ACACACGAAACATGAGCGGGTGAGTTGC--------TG---TA-AAA-GCCC------------------------------------TTTTCCTCGGAGTTTTCCGCGATCCTAACCC--------------------------------AT---------------------GGCCC----------AACCCC-------------------------GGATCTCTTCCAGACAAGCGGACATCGCCCTCATCGGCCTGGCGGTCATGGGCCAAAACCTGASizeHit CountTotal NormTotalM026
Head		M043
Female-body		M056
Embryo		V046
Embryo		V052
Head		V058
Head		V120
Male-body		SRR1275488
Male larvae		SRR1275486
Male prepupae		SRR1275484
Male prepupae		GSM1528802
follicle cells
...............................................................................................................................................................................................................................................................................................GACATCGCCCTCATCGGCCTGGCGGT.................2614.00400100030000
.................................................................................................................................................................................................................................................................................................CATCGCCCTCATCGGCCTGGCGGT.................2412.00200000020000
..................................................................................................................................................................................................................................................................................................ATCGCCCTCATCGGCCTGGCGGT.................2312.00200100010000
..................ACACAAACC-------GCACCAAGC----ACACACG....................................................................................................................................................................................................................................................................................2512.00201100000000
......................................................................................................................................................................................................................................................................................................................GGTCATGGGCCAAAACCTG.1912.00202000000000
..................................GCACCAAGC----ACACACGAAACATGAGC..........................................................................................................................................................................................................................................................................2612.00200000020000
.................................................................................................................................................................................................................................................................................................CATCGCCCTCATCGGCCTGGCGGTC................2512.00200000020000
......................................CAAGC----ACACACGAAACATGAGCGGACA.....................................................................................................................................................................................................................................................................2711.00101000000000
.................................................................................................................................................................AACCC--------------------------------AT---------------------GGCCC----------AACCCC-------------------------GGATC..........................................................2311.00100100000000
........................ACC-------GCACCAAGC----ACACACGAAACATG.............................................................................................................................................................................................................................................................................2611.00101000000000
.........................................GC----ACACACGAAACATGAGCGGG.......................................................................................................................................................................................................................................................................2211.00101000000000
................................................................................................................................................................................................................................................................................................ACATCGCCCTCATCGGCCTGGCGGT.................2511.00100000010000
...............................................ACACACGAAACATGAGCGG........................................................................................................................................................................................................................................................................1911.00100000010000
..............GGA-ACACAAACC-------GCACCAAG................................................................................................................................................................................................................................................................................................2011.00101000000000
.....................................................................................................................................................................................................................................................................................................GCCCTCATCGGCCTGGCGGT.................2011.00101000000000
..........................................C----ACACACGAAACATGAGCG.........................................................................................................................................................................................................................................................................1911.00101000000000
.....................................CCAAGC----ACACACGAAACATGAGCG.........................................................................................................................................................................................................................................................................2411.00100000010000
.......................................AAGC----ACACACGAAACATGAGCGGG.......................................................................................................................................................................................................................................................................2411.00100000010000
..........................................................................................................................................................................................................................................................................................AAGCGGACATCGCCCTCATCGGCCT.......................2511.00101000000000
.......................AACC-------GCACCAAGC----ACACACGA...................................................................................................................................................................................................................................................................................2111.00100000010000
...................CACAAACC-------GCACCAAGC----ACACACGA...................................................................................................................................................................................................................................................................................2511.00100010000000
..................................................................................................C------------------------------------TTTTCCTCGGAGTTTTCCGCGATCCT.........................................................................................................................................................................2711.00101000000000
..........................................................................................................................................................................................................................................................................................AAGCGGACATCGCCCTCATC............................2011.00101000000000
.......................AACC-------GCACCAAGC----ACACACG....................................................................................................................................................................................................................................................................................2011.00100000010000
...................................................ACGAAACATGAGCGGGTGAG...................................................................................................................................................................................................................................................................2011.00100000100000
.....................CAAACC-------GCACCAAGC----ACACACG....................................................................................................................................................................................................................................................................................2211.00100000010000
........................ACC-------GCACCAAGC----ACACACGA...................................................................................................................................................................................................................................................................................2011.00100100000000
.............TGGA-ACACAAACC-------GCACCAAGC----AC.........................................................................................................................................................................................................................................................................................2411.00101000000000
..................................................................................................................................................................................................................................................................................................ATCGCCCTCATCGGCCTGGCGGTCA...............2511.00100000010000
.....................................................GAAACATGAGCGGGTGAGT..................................................................................................................................................................................................................................................................1911.00101000000000
..................................................................................................................................................................................................................................................................................................ATCGCCCTCATCGGCCTGGC....................2011.00101000000000
......................................CAAGC----ACACACGAAACATGAGC..........................................................................................................................................................................................................................................................................2211.00100100000000
....................ACAAACC-------GCACCAAGC----ACACAC.....................................................................................................................................................................................................................................................................................2211.00100100000000
................A-ACACAAACC-------GCACCAAGC----ACACACG....................................................................................................................................................................................................................................................................................2611.00100000010000
...........................................................................................................................................................................................................................................................................................AGCGGACATCGCCCTCATCGGCCTGGCGGT.................3011.00100000010000
.....................CAAACC-------GCACCAAGC----ACACACGA...................................................................................................................................................................................................................................................................................2311.00101000000000
.........................................GC----ACACACGAAACATGAGC..........................................................................................................................................................................................................................................................................1911.00100000010000
.......................................................................................................................................................................................................................................................................................................CCTCATCGGCCTGGCGGTCATG.............2211.00100100000000
.AT----CATTGTTGGA-ACACAAAC................................................................................................................................................................................................................................................................................................................2011.00100000100000
........ATTGTTGGA-ACACAAACC-------G.......................................................................................................................................................................................................................................................................................................1911.00100001000000
.........................................................................................................................................................................................................................................................................................CAAGCGGACATCGCCCTCATCGGCCTGGC....................2911.00100000010000
........................ACC-------GCACCAAGC----ACACACG....................................................................................................................................................................................................................................................................................1911.00100010000000
..................................................................GTGAGTTGC--------TG---TA-AAA-GCCC------------------------------------...................................................................................................................................................................................................2011.00100100000000
..............................................................................................................................................................................................................................................................................................GGACATCGCCCTCATCGGCCTGGCGGT.................2711.00100000010000
..........................................C----ACACACGAAACATGAGCGGAC......................................................................................................................................................................................................................................................................2211.00100000010000
.............TGGA-ACACAAACC-------GCACCAAG................................................................................................................................................................................................................................................................................................2111.00101000000000
.................................................................................................................................................................................................................................................................................................................CTGGCGGTCATGGGCCAAAACCTG.2411.00101000000000
...............................................................................................................................................................................................................................................................................................GACATCGCCCTCATCGGCCTGGCGGTCATG.............3011.00100000010000
...................................................ACGAAACATGAGCGGGTG.....................................................................................................................................................................................................................................................................1811.00100100000000
..........................................................................................................................................................................................................................................................................................................CATCGGCCTGGCGGTCATGGGCCAA.......2511.00101000000000
.......CATTGTTGGA-ACACAAACC-------GCACC...................................................................................................................................................................................................................................................................................................2411.00110000000000
..........................C-------GCACCAAGC----ACACACGAAACATGAGCG.........................................................................................................................................................................................................................................................................2811.00101000000000
..................................................................................................................................................................................................................................................................................................ATCGCCCTCATCGGCCTGGCG...................2111.00100000010000
....................................................................................................................................................................................................................................................................................................CGCCCTCATCGGCCTGGCGGT.................2111.00100000010000
..........................................................................................................................................................................................................................................................................................AAGCGGACATCGCCCTCATCGG..........................2211.00100100000000
droSec2
AAT----CATTGTTGGA-ACACAAACC-------GCACGAAAA----ACACACAAAACATGAGCGGGTGAGTAGA--------GG---GA-AAT-GCCC------------------------------------TTTTCCCTGGAGTTTTCCGCGATCCTAA----------------------------------CGT---------------------CGCCC----------ATCCCC-------------------------GGATCTCTTCCAGACAAGCGGACATCGCCCTCATCGGTCTGGCCGTCATGGGCCAAAACCTAASizeHit CountTotal NormTotalM054
Female-body		V113
Male-body		V114
Embryo		V115
Head
........ATTGTTGGA-ACACAAACC-------G.......................................................................................................................................................................................................................................................................................................1918.0085003
...............................................ACACACAAAACATGAGCGGG.......................................................................................................................................................................................................................................................................2015.0050113
.................................................ACACAAAACATGAGCGGG.......................................................................................................................................................................................................................................................................1814.0041012
..................................................................GTGAGTAGA--------GG---GA-AAT-GCCC------------------------------------TTTT...............................................................................................................................................................................................2413.0030102
...............................................ACACACAAAACATGAGCGGGTGAG...................................................................................................................................................................................................................................................................2413.0031002
..................................................................................................................................................................................................................................................................................................ATCGCCCTCATCGGTCTGGC....................2012.0020110
..................................................................................................................................................................................................................................................................................................ATCGCCCTCATCGGTCTGGCC...................2112.0020020
.........................................AA----ACACACAAAACATGAGCGGG.......................................................................................................................................................................................................................................................................2212.0020101
..........................................A----ACACACAAAACATGAGCGGG.......................................................................................................................................................................................................................................................................2112.0020101
.......................................AAAA----ACACACAAAACATGAGCGGG.......................................................................................................................................................................................................................................................................2412.0020200
..................................................................GTGAGTAGA--------GG---GA-AAT-GCCC------------------------------------T..................................................................................................................................................................................................2112.0020200
...................................................ACAAAACATGAGCGGGTGAG...................................................................................................................................................................................................................................................................2011.0010100
.......................................AAAA----ACACACAAAACATGAGC..........................................................................................................................................................................................................................................................................2111.0011000
..........................................................ATGAGCGGGTGAGTAGA--------GG---GA-AAT-G..........................................................................................................................................................................................................................................2511.0010001
.................................................................................................................................................................AA----------------------------------CGT---------------------CGCCC----------ATCCCC-------------------------GGA............................................................1911.0011000
...............................................................................................................................................................................................................................................................................CTCTTCCAGACAAGCGGA.........................................1811.0010001
...................................................................TGAGTAGA--------GG---GA-AAT-GCC........................................................................................................................................................................................................................................1811.0011000
........ATTGTTGGA-ACACAAACC-------GCA.....................................................................................................................................................................................................................................................................................................2111.0011000
.......................................................................................................................................................................................................................................................................................................CCTCATCGGTCTGGCCGTCATGGGC..........2511.0010100
................................................................GGGTGAGTAGA--------GG---GA-AAT-G..........................................................................................................................................................................................................................................1911.0011000
..................................................................GTGAGTAGA--------GG---GA-AAT-GCC........................................................................................................................................................................................................................................1911.0011000
..........................................................ATGAGCGGGTGAGTAGA--------G......................................................................................................................................................................................................................................................1811.0010001
.....................................................AAAACATGAGCGGGTGAGTAGA--------G......................................................................................................................................................................................................................................................2311.0010100
..................................................................................................................................................................................................................................................................................................ATCGCCCTCATCGGTCTGGCCGTCATGGG...........2911.0010100
............TTGGA-ACACAAACC-------GCACGA..................................................................................................................................................................................................................................................................................................2011.0011000
........................ACC-------GCACGAAAA----ACACACAA...................................................................................................................................................................................................................................................................................2011.0011000
.......................................................AACATGAGCGGGTGAGTAGA--------GG---GA-...............................................................................................................................................................................................................................................2411.0011000
...................................................ACAAAACATGAGCGGGTGAGTAGA--------GG---..................................................................................................................................................................................................................................................2611.0010100
..............................................................GCGGGTGAGTAGA--------GG---GA-AAT-GCCC------------------------------------T..................................................................................................................................................................................................2511.0010001
.......................AACC-------GCACGAAAA----ACACAC.....................................................................................................................................................................................................................................................................................1911.0010001
...............................................................CGGGTGAGTAGA--------GG---GA-AA.............................................................................................................................................................................................................................................1811.0010001
......................................GAAAA----ACACACAAAACATGAGCGG........................................................................................................................................................................................................................................................................2411.0011000
.................................................................GGTGAGTAGA--------GG---GA-AAT-GCCC------------------------------------C..................................................................................................................................................................................................2211.0010001
................................................................GGGTGAGTAGA--------GG---GA-AAT-GCCC------------------------------------TTTT...............................................................................................................................................................................................2611.0011000
...................................................................................................................................................TTTTCCGCGATCCTAA----------------------------------CGT---------------------CG...........................................................................................................2111.0010010
.........TTGTTGGA-ACACAAACC-------G.......................................................................................................................................................................................................................................................................................................1811.0011000
............................................................GAGCGGGTGAGTAGA--------GG---GA-AAT-GC.........................................................................................................................................................................................................................................2411.0010001
........................................................................................................................................................................................................................................................................................................CTCATCGGTCTGGCCGTCATG.............2111.0011000
..........................................................ATGAGCGGGTGAGTAGA--------GG---..................................................................................................................................................................................................................................................1911.0010001
.................................................................GGTGAGTAGA--------GG---GA-AAT-GCCC------------------------------------T..................................................................................................................................................................................................2211.0010100
...............................................ACACACAAAACATGAGCG.........................................................................................................................................................................................................................................................................1811.0011000
.........................................AA----ACACACAAAACATGAGCGGGTGAG...................................................................................................................................................................................................................................................................2611.0010010
.......................................................AACATGAGCGGGTGAGTAGA--------GG---GA-A..............................................................................................................................................................................................................................................2511.0010001
..............................................................GCGGGTGAGTAGA--------GG---GA-AAT-G..........................................................................................................................................................................................................................................2111.0011000
.............................................................AGCGGGTGAGTAGA--------GG---GA-AAT-G..........................................................................................................................................................................................................................................2211.0011000
................................................................GGGTGAGTAGA--------GG---GA-AAT-GCC........................................................................................................................................................................................................................................2111.0011000
...............................................................................................................................................................................................................................................................................CTCTTCCAGACAAGCGGACATCGCC..................................2511.0011000
........................................................ACATGAGCGGGTGAGTAGA--------GG---GA-AA.............................................................................................................................................................................................................................................2511.0010100
.......................................................AACATGAGCGGGTGAGTA.................................................................................................................................................................................................................................................................1811.0010100
.....................................................................................................................................................................................................................................................................................................GCCCTCATCGGTCTGGCCGTCATGGGC..........2711.0010010
........................................................................................................................................................................................................................................................................................................CTCATCGGTCTGGCCGTCATGT............2211.0011000
...........................................................TGAGCGGGTGAGTAGA--------GG---GA-AA.............................................................................................................................................................................................................................................2211.0010100
...................................................ACAAAACATGAGCGGGTGAGTAGA--------G......................................................................................................................................................................................................................................................2511.0011000
..........................C-------GCACGAAAA----ACACACAAAACATGAGCG.........................................................................................................................................................................................................................................................................2811.0010100
..............................................................GCGGGTGAGTAGA--------GG---GA-AAT-GCCC------------------------------------TT.................................................................................................................................................................................................2611.0010100
................................................CACACAAAACATGAGCGGG.......................................................................................................................................................................................................................................................................1911.0010001
droSim2
AAT----CATTGTTGGA-ACACAAACC-------GCACGAAAA----ACACACAAAACATGAGCGGGTGAGTAGA--------GT---GA-AAT-GCCC------------------------------------TTTTCCCTGGTGTTTTCCGCGATCCTAA----------------------------------CGT---------------------CGCCC----------ATCCCC-------------------------GGATCTCTTCCAGACAAGCGGACATCGCCCTCATCGGCCTGGCCGTCATGGGCCAAAACCTGASizeHit CountTotal NormTotalM023
Head		M024
Male-body		M025
Embryo		M053
Female-body		O001
Testis		O002
Head		SRR553485
Ovary		SRR553486
Ovary		SRR553487
Ovary		SRR553488
Ovary		SRR618934
Ovary		V044
Embryo		SRR902008
Ovary		SRR902009
Testis		SRR1275487
Male larvae		SRR1275485
Male prepupae		SRR1275483
Male prepupae
........ATTGTTGGA-ACACAAACC-------G.......................................................................................................................................................................................................................................................................................................1917.00731010000002000000
........ATTGTTGGA-ACACAAACC-------GC......................................................................................................................................................................................................................................................................................................2016.00611000100003000000
........ATTGTTGGA-ACACAAACC-------........................................................................................................................................................................................................................................................................................................1815.00532000000000000000
...........GTTGGA-ACACAAACC-------G.......................................................................................................................................................................................................................................................................................................1614.00400000000004000000
..............................................................................................................................................................................................................................................................................................................GGCCTGGCCGTCATGGGC..........1813.00303000000000000000
...............................................................CGGGTGAGTAGA--------GT---GA-AAT-GCC........................................................................................................................................................................................................................................2213.00303000000000000000
.................................................ACACAAAACATGAGCGGG.......................................................................................................................................................................................................................................................................1813.00300000000002100000
............................................................GAGCGGGTGAGTAGA--------GT---GA-AAT-GC.........................................................................................................................................................................................................................................2412.00220000000000000000
........ATTGTTGGA-ACACAAACC-------GCACG...................................................................................................................................................................................................................................................................................................2312.00200010000000010000
........ATTGTTGGA-ACACAAACC-------GCA.....................................................................................................................................................................................................................................................................................................2112.00210000000001000000
.......................................................................................................................................................................................................................................................................................................................GTCATGGGCCAAAACCTGA1912.00200200000000000000
...............................................ACACACAAAACATGAGCGGGTGAG...................................................................................................................................................................................................................................................................2412.00200000100001000000
.................................................................................................................................................................................................................................................................................................CATCGCCCTCATCGGCCTGGCC...................2211.00101000000000000000
....................................ACGAAAA----ACACACAAAACATGAGCG.........................................................................................................................................................................................................................................................................2511.00100000100000000000
...................................................................TGAGTAGA--------GT---GA-AAT-GCC........................................................................................................................................................................................................................................1811.00101000000000000000
..........................................................ATGAGCGGGTGAGTAGA--------G......................................................................................................................................................................................................................................................1811.00100000000001000000
........................................................ACATGAGCGGGTGAGTAGA--------G......................................................................................................................................................................................................................................................2011.00100000000001000000
...........................................................................................................................................................................................................................................................................................................ATCGGCCTGGCCGTCATGGGCCAAAAC....2711.00100010000000000000
...................................................ACAAAACATGAGCGGGTGAG...................................................................................................................................................................................................................................................................2011.00100000000001000000
..................................................................................................................................................................................................................................................................................................ATCGCCCTCATCGGCCTGGCC...................2111.00101000000000000000
...........................................................................................................................................................................................................................................................................................AGCGGACATCGCCCTCATC............................1911.00110000000000000000
........ATTGTTGGA-ACACAAACC-------GCAC....................................................................................................................................................................................................................................................................................................2211.00101000000000000000
.....................................................................................................................................................................................................................................................................................................GCCCTCATCGGCCTGGCCGTCATG.............2411.00110000000000000000
...................................................................TGAGTAGA--------GT---GA-AAT-GCCC------------------------------------...................................................................................................................................................................................................1911.00101000000000000000
.......................................................AACATGAGCGGGTGAGTA.................................................................................................................................................................................................................................................................1811.00100000000001000000
..................................GCACGAAAA----ACACACAAAACATGAGCG.........................................................................................................................................................................................................................................................................2711.00100000100000000000
..................................................................................................................................................................................................................................................................................................ATCGCCCTCATCGGCCTGGCCGTCATGG............2811.00100010000000000000
........................................................ACATGAGCGGGTGAGTAG................................................................................................................................................................................................................................................................1811.00100000000001000000
.....................................................AAAACATGAGCGGGTGAG...................................................................................................................................................................................................................................................................1811.00100000000001000000
.........................CC-------GCACGAAAA----ACACACAAAACATGAGC..........................................................................................................................................................................................................................................................................2811.00100010000000000000
...............................................................................................................................................................................................................................................................................CTCTTCCAGACAAGCGGA.........................................1811.00110000000000000000
..................................................................................................................................................................................................................................................................................................ATCGCCCTCATCGGCCTGGCCGG.................2311.00101000000000000000
.........................................................................................................................................................................................................................................................................................CAAGCGGACATCGCCCTCATCGGCCT.......................2611.00100100000000000000
.......................................................................................................................................................................................................................................................................................................................GTCATGGGCCAAAACCTG.1811.00100100000000000000
................................................CACACAAAACATGAGCGGGTGAG...................................................................................................................................................................................................................................................................2311.00110000000000000000
....................................................CAAAACATGAGCGGGTGA....................................................................................................................................................................................................................................................................1811.00100000000001000000
..................................................................GTGAGTAGA--------GT---GA-AAT-G..........................................................................................................................................................................................................................................1711.00100000000001000000
..............................................................................................................................................................CCTAA----------------------------------CGT---------------------CGCCC----------ATCCCC-------------------------...............................................................1911.00110000000000000000
.......................................AAAA----ACACACAAAACATGAGCG.........................................................................................................................................................................................................................................................................2211.00100010000000000000
...............................................................................................................................................................................................................................................................................CTCTTCCAGACAAGCGGACATCGC...................................2411.00110000000000000000
..............................................................................................................................................................................................................................................................................TCTCTTCCAGACAAGCGGAC........................................2011.00110000000000000000
...........GTTGGA-ACACAAACC-------GCACGAAAA----AC.........................................................................................................................................................................................................................................................................................2611.00100010000000000000
......................................................................GTAGA--------GT---GA-AAT-GCCC------------------------------------TT.................................................................................................................................................................................................1811.00110000000000000000
.....................................CGAAAA----ACACACAAAACATGA............................................................................................................................................................................................................................................................................2111.00100000100000000000
.................................................................................................CC------------------------------------TTTTCCCTGGTGTTTTCCGCGATC...........................................................................................................................................................................2611.00100010000000000000
............................................................GAGCGGGTGAGTAGA--------GT---G.................................................................................................................................................................................................................................................1811.00100000000001000000
...........................................................................................................................................................................................................................................................................................AGCGGACATCGCCCTCATCGGCCTGGCC...................2811.00101000000000000000
......................................................................................................................................................................................................................................................................................................CCCTCATCGGCCTGGCCGT.................1911.00101000000000000000
...........GTTGGA-ACACAAACC-------GCA.....................................................................................................................................................................................................................................................................................................1811.00100000000001000000
..................................................................................................................................................................................................................................................................................................................TGGCCGTCATGGGCCAAAACCTG.2311.00101000000000000000
.................................................ACACAAAACATGAGCGGGTGAG...................................................................................................................................................................................................................................................................2211.00100000000001000000
..........................C-------GCACGAAAA----ACACACAAAACATG.............................................................................................................................................................................................................................................................................2411.00100000100000000000
.................................................ACACAAAACATGAGCGGAC......................................................................................................................................................................................................................................................................1940.50200000002000000000
..................................................CACAAAACATGAGCGGAC......................................................................................................................................................................................................................................................................1870.14110000000000000000
dm3
AAT----CATTGTTGGA-GCACAAACC---------ACAAAGA----ACACACGAAACATGAGCGGGTGAGTAGA--------GG---GA-AAT-TCTC------------------------------------TTTTCCCCGGAGTTTTCCGCGATCCTAA----------------------------------CGT---------------------CGCCC----------ATTTCC-------------------------GGATTTCTTCCAGACAAGCGGATATTGCCCTCATCGGCCTGGCCGTCATGGGCCAAAACCTGASizeHit CountTotal NormTotalGSM154618
Ovary		GSM154620
Ovary		GSM154621
Ovary		GSM154622
Ovary		GSM180328
Head		GSM180329
Mixed-body		GSM180330
Embryo		GSM180331
Embryo		GSM180332
Embryo		GSM180333
Embryo		GSM180334
Larvae		GSM180335
Disc		GSM180336
Pupae		GSM180337
S2		GSM231091
Ovary		GSM239041
Head		GSM239050
Head		GSM239051
S2		GSM239052
S2		GSM246084
Head		GSM266765
S2		GSM280082
Ovary		GSM280083
Ovary		GSM280084
Ovary		GSM280085
Testis		GSM280086
Ovary		GSM280087
S2-NP		GSM280088
S2-NP		GSM312995
Head		GSM313160
Head		GSM313161
Head		GSM313162
Head		GSM313163
Head		GSM313164
Head		GSM313165
Head		GSM343287
Embryo		GSM379050
Ovary		GSM379051
Ovary		GSM379052
Ovary		GSM379053
Ovary		GSM379054
Ovary		GSM379055
Ovary		GSM379056
Ovary		GSM379057
Ovary		GSM379058
Ovary		GSM379059
Ovary		GSM379060
Ovary		GSM379061
Ovary		GSM379062
Ovary		GSM379063
Ovary		GSM379064
Ovary		GSM379065
Ovary		GSM379066
Ovary		GSM379067
Ovary		GSM424739
S2		GSM424740
S2		GSM424741
S2		GSM467729
Female-body		GSM467730
Female-body		GSM467731
Female-body		M002
CS		M003
Male-body		M004
Male-body		M005
ML-DmD32		M006
ML-DmD32		M029
OSC		M030
OSC		M031
OSC		M032
S2-R+		M033
S2-R+		M034
S2-R+		M035
S2-R+		M036
S2-R+		M037
S2-R+		M038
S2-R+		M039
S2-R+		M048
S2-R+		OSS2
OSS		OSS6
OSS		OSS7
OSS		OSS8
OSS		S1
Head		S10
Embryo		S11
Embryo		S12
Embryo		S13
Embryo		S14
Embryo		S15
S2-GMR		S16
Kc		S17
Larvae		S18
Larvae		S19
Pupae		S2
Head		S20
Pupae		S21
Disc		S22
Head		S23
Female-body		S24
Male-body		S25
Larvae		S26
Larvae		S27
Pupae		S28
Pupae		S29
Head		S3
Male-body		S30
S2-GMR		S31
S2		S32
S2		S33
Kc		S34
Kc		S35
Kc		S4
Female-body		S5
Disc		S6
Embryo		S7
Embryo		S8
S2		S9
Embryo		SRR001337
Head		SRR001338
Head		SRR001339
Head		SRR001340
Head		SRR001341
Head		SRR001342
Head		SRR001343
Head		SRR001344
Head		SRR001345
Head		SRR001346
Head		SRR001347
Head		SRR001348
Head		SRR001349
Head		SRR001664
Head		SRR010951
Ovary		SRR010952
Ovary		SRR010953
Ovary		SRR010954
Ovary		SRR010955
Ovary		SRR010956
Ovary		SRR010957
Ovary		SRR010958
Ovary		SRR010959
Ovary		SRR010960
Ovary		SRR014268
Embryo		SRR014269
Embryo		SRR014270
Embryo		SRR014271
Embryo		SRR014272
Embryo		SRR014273
Ovary		SRR014274
Ovary		SRR014275
Ovary		SRR014276
Ovary		SRR014277
Ovary		SRR014278
Ovary		SRR014279
Ovary		SRR014280
Ovary		SRR014281
Ovary		SRR014282
Ovary		SRR023197
S2		SRR023399
S2		SRR023400
S2		SRR023402
S2		SRR023407
S2		SRR029028
S2		SRR029029
S2		SRR029030
S2		SRR029031
S2		SRR029032
S2		SRR029033
S2		SRR029608
Head		SRR029633
Head		SRR030145
gb3		SRR031692
Head		SRR031693
Head		SRR031694
Head		SRR031696
Head		SRR031697
Head		SRR031698
Head		SRR031699
Head		SRR031700
Head		SRR031701
Head		SRR031702
Head		SRR031703
Head		SRR031704
Head		SRR032092
S2		SRR032093
S2		SRR032094
S2		SRR032095
S2-NP		SRR032096
S2-NP		SRR032152
Head		SRR060643
Testis		SRR060644
Ovary		SRR060645
Testis		SRR060646
Ovary		SRR060647
Ovary		SRR060648
Ovary		SRR060649
Ovary		SRR060650
Testis		SRR060651
Ovary		SRR060652
Testis		SRR060653
Ovary		SRR065151
Ovary		SRR065152
Ovary		SRR065153
Ovary		SRR065154
Ovary		SRR065155
Ovary		SRR065800
Ovary		SRR065801
Ovary		SRR065802
Ovary		SRR065803
Ovary		SRR065804
Ovary		SRR065805
Ovary		SRR065806
Ovary		SRR065807
Ovary		SRR097865
S2-NP		SRR097866
S2-NP		SRR097867
S2-NP		SRR298536
Ovary		SRR298537
Ovary		SRR298711
Ovary		SRR298712
Ovary		SRR317110
Ovary		SRR317111
Ovary		SRR317112
Ovary		SRR317113
Ovary		SRR317114
Ovary		SRR317115
Ovary		SRR317116
Ovary		SRR317117
Ovary		SRR341115
S2		SRR341116
S2		SRR341117
S2		SRR341118
S2		SRR351332
Mixed-body		SRR351333
Mixed-body		T004
OSC		T005
CME-L1		V001
Embryo		V002
Embryo		V003
S2		V006
Female-body		V007
Head		V008
S2		V009
CME-L1		V010
ML-DmD20-C5		V011
Sg4		V012
Male-body		V013
Head		V014
DTT		V015
DreRFHV		V018
Kc167		V019
GM2		V020
S2-R+		V021
ML-DmD21		V022
ML-DmD32		V023
Head		V024
Kc167		V025
S2-R+		V026
1182-2H		V027
ML-DmD21		V028
CME-W1-Cl.8+		V029
ML-DmD9		V030
ML-DmD8		V031
GM2		V032
S1		V033
CME-W1-Cl.8+		V034
ML-DmD16-C3		V035
ML-DmD32		V036
ML-DmD20-C5		V037
S2		V038
S2		V063
Ovary		V0632
Ovary		V064
Ovary		V0642
Ovary		V065
Ovary		V0652
Ovary		V066
Ovary		V0662
Ovary		V067
S2-NP		V073
mbn2		V074
S3		V075
ML-DmBG1-C1		V076
ML-DmBG3-C2		V077
Head		V078
Head		V079
Head		V080
Head		V081
Embryo		V082
Embryo		V083
Male-body		V084
Female-body		V085
CME-W2		V086
Female-body		V088
Ovary		V0882
Ovary		V089
Ovary		V0892
Ovary		V090
Male-body		V091
fGS/OSS		V092
Male-body		V093
Male-body		V094
S2-R+		V095
S2-R+		V096
Ovary		V097
Ovary		V098
Ovary		V125
ML-DmD9		V126
CME-L1		V127
G2		V128
S3		V129
ML-DmBG1-C1		V130
ML-DmBG3-C2		V131
ML-DmD16-C3		V132
ML-DmD32		V133
Sg4		V134
ML-DmD8		V135
CME-W2		V136
Male-body		V137
Head		V138
Male-body		V139
Female-body		V140
Female-body		V141
Female-body		V142
Female-body		V144
OSC		V145
S2		V146
S1		V147
1182-2H		V148
mbn2		GSM1528798
follicle cells
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...............................................ACACACGAAACATGAGCGGGTGAGT..................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................................GGTGAGTAGA--------GG---GA-AAT-TC.........................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................ACACACGAAACATGAGCGGACA.....................................................................................................................................................................................................................................................................2221.0020000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................ACGAAACATGAGCGGGT......................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................GA----ACACACGAAACATGAGCC.........................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TATTGCCCTCATCGGCCTGGCC...................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................GA----ACACACGAAACATGAGCGGA.......................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................GAGTAGA--------GG---GA-AAT-TCTC------------------------------------T..................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000
..........TGTTGGA-GCACAAACC---------ACAA..................................................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................AAACATGAGCGGGTGAGTAGA--------GG---GA-...............................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................TGCCCTCATCGGCCTGGCC...................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................................................................................................................TCCCCGGAGTTTTCCGCGATCCTAA----------------------------------CGT---------------------.............................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................CCAGACAAGCGGATATTGCCCTCAT.............................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................AAAGA----ACACACGAAACATGAGA..........................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...................................................ACGAAACATGAGCGGGTGAGTAGA--------AT---C.................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................AGCGGGTGAGTAGA--------GG---GA-AAT-TCTC------------------------------------...................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000
.............TGGA-GCACAAACC---------ACAAAGA----ACACACG....................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000
.AT----CATTGTTGGA-GCACAAACC---------......................................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................AGCGGGTGAGTAGA--------GG---GA-AAT-TC.........................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000
.........TTGTTGGA-GCACAAACC---------ACAAAGA----ACA........................................................................................................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................................................TCTC------------------------------------TTTTCCCCGGAGTTTTCCGC...............................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
...................................................................................................................................................TTTTCCGCGATCCTAA----------------------------------CGT---------------------CG...........................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........GTTGGA-GCACAAACC---------ACAAAGA----A..........................................................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................GAAACATGAGCGGGTGAGTAGA--------G......................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000
........ATTGTTGGA-GCACAAACC---------ACAAAGA----ACAC.......................................................................................................................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000
.................................................ACACGAAACATGAGCGGGTGAGTA.................................................................................................................................................................................................................................................................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................A-GCACAAACC---------ACAAAGA----ACAC.......................................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................AACATGAGCGGGTGAGTAGA--------GG---GA-A..............................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000
......................................AAAGA----ACACACGAAACATGAGCGGAC......................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.............................................................AGCGGGTGAGTAGA--------GG---GA-AAT-...........................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..........................................A----ACACACGAAACATGAG...........................................................................................................................................................................................................................................................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..............................................................GCGGGTGAGTAGA--------GG---GA-AAT-TCTC------------------------------------TTT................................................................................................................................................................................................2711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
................................................CACACGAAACATGAGCGGA.......................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................TTTCTTCCAGACAAGCG...........................................1711.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...............................................................CGGGTGAGTAGA--------GG---GA-AAT-TCTC------------------------------------TTT................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......CATTGTTGGA-GCACAAACC---------ACA...................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
........................................AGA----ACACACGAAACATGAGCGGGTG.....................................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100
.....................................................................................................................................................................................................................................................................................................GCCCTCATCGGCCTGGCCGTC................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
...........................................................TGAGCGGGTGAGTAGA--------GG---GA-AAT-TCTC------------------------------------T..................................................................................................................................................................................................2811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000
........ATTGTTGGA-GCACAAACC---------ACAA..................................................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
......................................................................................................................................................................................................................................................................................................CCCTCATCGGCCTGGCCGTCATC.............2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................CAAAGA----ACACACGAAACATGA............................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
........................................AGA----ACACACGAAACATGAGCGG........................................................................................................................................................................................................................................................................2211.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000
...................................................ACGAAACATGAGCGGGTGAGTAGA--------G......................................................................................................................................................................................................................................................2511.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
........................ACC---------ACAAAGA----ACACACGAAACATGAG...........................................................................................................................................................................................................................................................................2611.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
...................................................................................................................................................................................................................................................................................................TTGCCCTCATCGGCCTGGCC...................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................AACATGAGCGGGTGAGTAG................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000
....................................................................................................................................................TTTCCGCGATCCTAA----------------------------------CGT---------------------CG...........................................................................................................2011.0010000000000000000000000000000000000000000000000001000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................GCACAAACC---------ACAAAGA----AC.........................................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.................................................ACACGAAACATGAGCGGAC......................................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................GACAAGCGGATATTGCCCTCATCG...........................2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
.........................................................................................................................................................................................................................................................................................................TCATCGGCCTGGCCGTCATGGGCC.........2411.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
..................................................................................................................................................GTTTTCCGCGATCCTAA----------------------------------CGT---------------------C............................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000000000
....................................................CGAAACATGAGCGGGTGAGTAGA--------.......................................................................................................................................................................................................................................................2311.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
....................................................CGAAACATGAGCGGGTGA....................................................................................................................................................................................................................................................................1811.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000001000000000000000000000000000000000
..................................................................GTGAGTAGA--------GG---GA-AAT-TCTC------------------------------------TTTTCCCCG..........................................................................................................................................................................................2911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.........................................................CATGAGCGGGTGAGTAGA--------G......................................................................................................................................................................................................................................................1911.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000010000000000000000000000000
........................................AGA----ACACACGAAACATGAGC..........................................................................................................................................................................................................................................................................2011.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000
.....................................................GAAACATGAGCGGGTGAGTAG................................................................................................................................................................................................................................................................2111.0010000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000000100000000000000
droEug1
CTT----CATTGTTGAA-TTAGAAACC-------GCACGATAAGCACACACACTAAACATGAGCGGGTGAGTAAG--------AA---GA-GTTAGCCC------------------------------------TTTTC-GTTTTGTTTTTGT---T----------------TTCAA------------------TAT-----------TTTTTAATGAC---AATTT----TT-TTTGT-------------------------GGAT-TTTCGCAGACAAGCGGACATTGCTCTCATTGGCCTGGCCGTTATGGGCCAAAATCTGASizeHit CountTotal NormTotal
No Reads
droBia1
CCC----CAATACTGAA-AAAGA--TC-------G------AA----ACACACGAAACATGAGCGGGTGAGTAAG--------GG---GA-AATAGCCC------------------------------------TTCTC-GGGTT----------------------------GTCAAGTTGTTCATGTT--------------------TCTCGAATGTC---A-TG--T--TT-TTTGTGAGTTTCTCCTAATGCTTTCCC---GTTTCTTTGGCAGACAAGCGGACATTGCTCTCATCGGCCTGGCCGTCATGGGCCAGAACCTGASizeHit CountTotal NormTotal
No Reads
droTak1
AGCTCCACATTGCTGAA-ACAGAGACC-------G------AA----ACACACGAAACATGAGCGGGTGAGTAAG--------AG---GA-AGCGGCCC------------------------------------TTA-G---------------------------------------------------------------TTAATATTTTTGTAATGTC---A-TG--TTTTT-TTTGTGATTTTTTCC---------CCA---ATATTTTTTGCAGACAAGCGGACATTGCTCTCATCGGCCTGGCCGTCATGGGCCAGAATCTGASizeHit CountTotal NormTotal
No Reads
droEle1
AAA----CAATGCCGCAAACTAAATGCGAACCTTGCACGACAA----ACACACAAAACATGAGCGGGTGAGTAAG--------AGAG-GA-TATGGCCC------------------------------------T-------GCTTTTTTT----------------------TGCAAGTTCTTCTTGTTTCCTAACGAATGTTATTATTTT----------------------------------------AATTTTTTCATGTTTCTTATTCTGCAGACAAGCGGACATTGCACTCATCGGCCTAGCCGTCATGGGCCAAAATCTGASizeHit CountTotal NormTotal
No Reads
droRho1
AAA----TAATGCCGCAAACTGAATGCGCACCTTGCACACTTA----ACACACAAAACATGAGCGGGTAAGTAAG--------AGAG-GA-AATAGACC------------------------------------GTTT--------TTTTT---------TC------TTGTTTGCAAGATTC---TGTTTTCTAACGA---------------------A---TATTGGT--TT-TTATTTACTTTCT--TTATT-TTTTAT---GTTTTCTTTGCAGACAAGCGGACATTGCACTCATCGGCCTGGCCGTCATGGGCCAAAACCTGASizeHit CountTotal NormTotal
No Reads
droFic1
GG----------------AGACAGACT----CTAGCACAACAA----GCATACAAACCATGAGCGGGTGAGTTAA--------AG---GA-AAAGGACC------------------------------------TTT-GCTTTTGGTTTTCGTGTTTTCTAA----------------------------------TGG---------------------CTAAC----------A----A-------------------------AAAACTGTTATAGACAAGCGGACATTGCACTCATCGGACTGGCCGTCATGGGCCAGAACCTGASizeHit CountTotal NormTotal
No Reads
droKik1
AAT----TGCATTTGAG-ACAAAATAC-------TTGCAGAAA----AAACACACAAAATGAGCGGGTGAGTGGC--------GT---GG----------------------------------------------TTCCCTTGATGTTTTAAATGAAATGAAATCATT--------------GCCGTGTTTCCTTTT------------------------------------------------------------------------TGCCACCCAGAAAAGCCGATATCGCACTCATTGGCCTGGCTGTAATGGGTCAGAATCTCASizeHit CountTotal NormTotal
No Reads
droAna3
AA----------------------------------------A----GTACACACAAAATGAGCGGGTGAGTTGAACTGCAAGAGA--GA-GA----AAGCATGA---GATCATTAACCCTTTAACACCTGGATATTT-TATTAT--TTTTT---------------------------------------------TGT---------------------TG-----------------------------------------------TGTTTTGCAGAAAAGCTGATATTGCTCTGATTGGCCTGGCCGTAATGGGCCAGAATCTCASizeHit CountTotal NormTotalM044
Female-body		M058
Embryo		V039
Embryo		V055
Head		V105
Male-body		V106
Head
.................................................................................................................................................................................................................................................................................................TATTGCTCTGATTGGCCTGG.....................2012.002200000
..............................................................................................................................................................................................................................................................................................TGATATTGCTCTGATTGGCCTGGC....................2412.002200000
...............................................................................................................................................................................................................................................................................................GATATTGCTCTGATTGGCCTGGCC...................2412.002020000
AA----------------------------------------A----GTACACACAAAATGAGC..........................................................................................................................................................................................................................................................................2011.001000010
.................................................................................................................................................................................................................................................................................................TATTGCTCTGATTGGCCTGGC....................2111.001100000
..................................................................................................................................................................................................................................................................................................ATTGCTCTGATTGGCCTGGCC...................2111.001010000
............................................................................................................................................................................................................................................................................................GCTGATATTGCTCTGATTGGCCTGGCCGT.................2911.001100000
....................................................................................................................................................................................................................................................................................................TGCTCTGATTGGCCTGGC....................1811.001100000
........................................................................................................................................................................................................................................................................................................CTGATTGGCCTGGCCGTAATGGGCCAGA......2811.001010000
..................................................................................................................................................................................................................................................................................................ATTGCTCTGATTGGCCTGGC....................2011.001100000
AA----------------------------------------A----GTACACACAAAATGAGCGG........................................................................................................................................................................................................................................................................2211.001100000
....................................................................................................................................................................................................................................................................................................TGCTCTGATTGGCCTGGCCGTAATGG............2611.001100000
droBip1
AAT----TATTTTGTGA-AATAAAAAA-------ACAACAATT----ATACACA-AAAATGAGCGGGTAAGTTAA--------AAAATAA-AAAAAACCGCATGAAAAGATCA----------------------TTA-AACTTTGCATTTCCAAATTATTTG----------------------------------TAT---------------------TG-----------------------------------------------T-CTTTGCAGAAAAGCTGATATTGCTCTTATTGGCCTGGCCGTAATGGGCCAGAATCTCASizeHit CountTotal NormTotal
No Reads
dp5
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAAAAGCTGATATTGCACTTATTGGACTGGCCGTGATGGGCCAGAATCTCASizeHit CountTotal NormTotalM022
Male-body		M040
Female-body		M059
Embryo		M062
Head		V043
Embryo		V051
Head		V112
Male-body		SRR902010
Ovary		SRR902011
Testis		SRR902012
CNS imaginal disc
...........................................................................................................................................................................................................................................................................................................ATTGGACTGGCCGTGATGGGC..........2112.0020100001000
...........................................................................................................................................................................................................................................................................................................ATTGGACTGGCCGTGATGGG...........2011.0010100000000
....................................................................................................................................................................................................................................................................................................TGCACTTATTGGACTGGCCGTGA...............2311.0010100000000
...........................................................................................................................................................................................................................................................................................................ATTGGACTGGCCGTGATGGGCCA........2311.0010100000000
.....................................................................................................................................................................................................................................................................................................GCACTTATTGGACTGGCCGTGATGGGC..........2711.0010000000001
...............................................................................................................................................................................................................................................................................................GATATTGCACTTATTGGACTGGC....................2311.0010000100000
.......................................................................................................................................................................................................................................................................................................ACTTATTGGACTGGCCGTGATGGGCC.........2611.0010010000000
..........................................................................................................................................................................................................................................................................................AAGCTGATATTGCACTTATTGGACTGGCC...................2911.0010010000000
.............................................................................................................................................................................................................................................................................................................TGGACTGGCCGTGATGGGC..........1911.0010000000100
.........................................................................................................................................................................................................................................................................................AAAGCTGATATTGCACTTATTGGA.........................2411.0010100000000
...................................................................................................................................................................................................................................................................................................TTGCACTTATTGGACTGGC....................1911.0010100000000
..........................................................................................................................................................................................................................................................................................................TATTGGACTGGCCGTGATGGGCCA........2411.0010100000000
droPer2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGAAAAGCTGATATTGCACTTATTGGACTGGCCGTGATGGGCCAGAATCTCASizeHit CountTotal NormTotalM021
Embryo		M042
Female-body		V042
Embryo		V050
Head		V057
Head		V111
Male-body
.......................................................................................................................................................................................................................................................................................................ACTTATTGGACTGGCCGTGATGGGC..........2513.003300000
................................................................................................................................................................................................................................................................................................ATATTGCACTTATTGGACT.......................1913.003300000
..........................................................................................................................................................................................................................................................................................AAGCTGATATTGCACTTATTGGACT.......................2513.003300000
...........................................................................................................................................................................................................................................................................................................ATTGGACTGGCCGTGATGGGCCAGA......2512.002200000
......................................................................................................................................................................................................................................................................................................................CGTGATGGGCCAGAATCT..1812.002200000
..................................................................................................................................................................................................................................................................................................ATTGCACTTATTGGACTGGCC...................2112.002200000
..................................................................................................................................................................................................................................................................................................ATTGCACTTATTGGACTGGC....................2012.002200000
...........................................................................................................................................................................................................................................................................................................ATTGGACTGGCCGTGATGGGC..........2111.001100000
............................................................................................................................................................................................................................................................................................................TTGGACTGGCCGTGATGGGC..........2011.001100000
..................................................................................................................................................................................................................................................................................................ATTGCACTTATTGGACTGGCCGTGATGGG...........2911.001100000
...............................................................................................................................................................................................................................................................................................GATATTGCACTTATTGGACTGGC....................2311.001001000
......................................................................................................................................................................................................................................................................................................................CGTGATGGGCCAGAATCTC.1911.001100000
................................................................................................................................................................................................................................................................................................ATATTGCACTTATTGGACTG......................2011.001001000
.......................................................................................................................................................................................................................................................................................................ACTTATTGGACTGGCCGTGATGGGCC.........2611.001100000
.....................................................................................................................................................................................................................................................................................................GCACTTATTGGACTGGCC...................1811.001100000
..............................................................................................................................................................................................................................................................................................TGATATTGCACTTATTGGACT.......................2111.001100000
droWil2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAAAGCTGATATAGCCCTGATTGGATTGGCCGTAATGGGCCAAAATCTCASizeHit CountTotal NormTotalM020
Head		M045
Female-body		V117
Male-body		V118
Embryo		V119
Head
...............................................................................................................................................................................................................................................................................................GATATAGCCCTGATTGGATTGGCC...................2414.00400310
..................................................................................................................................................................................................................................................................................................ATAGCCCTGATTGGATTGGC....................2013.00310200
...........................................................................................................................................................................................................................................................................................................ATTGGATTGGCCGTAATGGGC..........2113.00310020
...........................................................................................................................................................................................................................................................................................AGCTGATATAGCCCTGATTGGATTGGCC...................2812.00210100
....................................................................................................................................................................................................................................................................................................AGCCCTGATTGGATTGGCCGTAATGGG...........2712.00200020
..................................................................................................................................................................................................................................................................................................ATAGCCCTGATTGGATTGG.....................1912.00200110
...............................................................................................................................................................................................................................................................................................GATATAGCCCTGATTGGATT.......................2012.00200020
...........................................................................................................................................................................................................................................................................................AGCTGATATAGCCCTGATTGGATTGGC....................2712.00200200
...............................................................................................................................................................................................................................................................................................GATATAGCCCTGATTGGATTGGC....................2312.00200110
.................................................................................................................................................................................................................................................................................................TATAGCCCTGATTGGATTGGC....................2112.00200200
..............................................................................................................................................................................................................................................................................................TGATATAGCCCTGATTGGATTGGC....................2411.00100100
.........................................................................................................................................................................................................................................................................................AAAGCTGATATAGCCCTGATTGGATTGGC....................2911.00100100
.........................................................................................................................................................................................................................................................................................AAAGCTGATATAGCCCTGATTGGATT.......................2611.00101000
................................................................................................................................................................................................................................................................................................ATATAGCCCTGATTGGATTGGCC...................2311.00110000
..........................................................................................................................................................................................................................................................................................................GATTGGATTGGCCGTAATGGGC..........2211.00100100
................................................................................................................................................................................................................................................................................................ATATAGCCCTGATTGGATTGGC....................2211.00100010
...................................................................................................................................................................................................................................................................................................TAGCCCTGATTGGATTGGCC...................2011.00100100
..........................................................................................................................................................................................................................................................................................AAGCTGATATAGCCCTGATTGGATTGGC....................2811.00100100
...............................................................................................................................................................................................................................................................................................GATATAGCCCTGATTGGATTGG.....................2211.00100100
..........................................................................................................................................................................................................................................................................................AAGCTGATATAGCCCTGATTGGATTG......................2611.00100100
droVir3
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGCAAAGCTGATATTGCACTGATCGGCCTGGCCGTAATGGGCCAAAATCTCASizeHit CountTotal NormTotalM027
Male-body		M028
Head		M047
Female-body		M061
Embryo		SRR060654
Ovary		SRR060655
Testis		SRR060656
Ovary		SRR060657
Testis		SRR060658
Ovary		SRR060659
Testis		SRR060660
Ovary		SRR060661
Embryo		SRR060662
Embryo		SRR060663
Embryo		SRR060664
Male-body		SRR060665
Female-body		SRR060666
Male-body		SRR060667
Female-body		SRR060668
Male-body		SRR060669
Female-body		SRR060670
Testis		SRR060671
Male-body		SRR060672
Female-body		SRR060673
Ovary		SRR060674
Ovary		SRR060675
Ovary		SRR060676
Ovary		SRR060677
Ovary		SRR060678
Testis		SRR060679
Testis		SRR060680
Testis		SRR060681
Testis		SRR060682
Embryo		SRR060683
Testis		SRR060684
Embryo		SRR060685
Embryo		SRR060686
Embryo		SRR060687
Embryo		SRR060688
Ovary		SRR060689
Testis		SRR1106712
embryo_0-2h		SRR1106713
embryo_0-2h		SRR1106714
embryo_2-4h		SRR1106715
embryo_4-6h		SRR1106716
embryo_4-6h		SRR1106717
embryo_6-8h		SRR1106718
embryo_6-8h		SRR1106719
embryo_8-10h		SRR1106720
embryo_8-10h		SRR1106721
embryo_10-12h		SRR1106722
embryo_10-12h		SRR1106723
embryo_12-14h		SRR1106724
embryo_12-14h		SRR1106725
embryo_14-16h		SRR1106726
embryo_14-16h		SRR1106727
larvae		SRR1106728
larvae		SRR1106729
mixed whole adult body		SRR1106730
embryo_16-30h		V047
Embryo		V053
Head		V116
Male-body		GSM1528803
follicle cells
..................................................................................................................................................................................................................................................................................................ATTGCACTGATCGGCCTGGC....................2013.003001000000000000000000000000000000000000000000000000000000000020
...............................................................................................................................................................................................................................................................................................GATATTGCACTGATCGGCCTGGC....................2312.002100000000000000000000000000000000000000000000000000000000000010
..........................................................................................................................................................................................................................................................................................................GATCGGCCTGGCCGTAATGGGC..........2212.002101000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................GCACTGATCGGCCTGGCCGTA................2112.002001000000000000000000000010000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................GCACTGATCGGCCTGGCCGTAATGGGC..........2712.002001000000000000000000000000000000000000000000000000000000000010
.............................................................................................................................................................................................................................................................................................CTGATATTGCACTGATCGGCCTGGC....................2512.002000000000000000000000000000000000000000000000000000000000000002
................................................................................................................................................................................................................................................................................................ATATTGCACTGATCGGCCTGGC....................2212.002200000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................GCACTGATCGGCCTGGCC...................1811.001000000000000000000000000000000000000000000000000000000000000010
.................................................................................................................................................................................................................................................................................................TATTGCACTGATCGGCCTGGCC...................2211.001000000000000000000000010000000000000000000000000000000000000000
...........................................................................................................................................................................................................................................................................................................ATCGGCCTGGCCGTAATGGGC..........2111.001100000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................CAAAGCTGATATTGCACTGA..............................2011.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................GCTGATATTGCACTGATCGGCCTGGC....................2611.001001000000000000000000000000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................................GGCCTGGCCGTAATGGGC..........1811.001001000000000000000000000000000000000000000000000000000000000000
............................................................................................................................................................................................................................................................................................GCTGATATTGCACTGATCGGCCT.......................2311.001000000000000000000000010000000000000000000000000000000000000000
.................................................................................................................................................................................................................................................................................................TATTGCACTGATCGGCCTGGCCGTAA...............2611.001000000000000000000000000100000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................ATTGCACTGATCGGCCTG......................1811.001000000000000000000000100000000000000000000000000000000000000000
....................................................................................................................................................................................................................................................................................................TGCACTGATCGGCCTGGCCGTAATG.............2511.001000000000100000000000000000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TTGCACTGATCGGCCTGGCCGTC................2311.001000000000000000000000001000000000000000000000000000000000000000
...................................................................................................................................................................................................................................................................................................TTGCACTGATCGGCCTGGC....................1911.001000000000000000000000000000000000000000000000000000000000000010
....................................................................................................................................................................................................................................................................................................TGCACTGATCGGCCTGGCC...................1911.001010000000000000000000000000000000000000000000000000000000000000
........................................................................................................................................................................................................................................................................................CAAAGCTGATATTGCACTGATC............................2211.001000000000000000000000000000000100000000000000000000000000000000
................................................................................................................................................................................................................................................................................................ATATTGCACTGATCGGCCTGGCCGTAATG.............2911.001100000000000000000000000000000000000000000000000000000000000000
................................................................................................................................................................................................................................................................................................ATATTGCACTGATCGGCCTGGCCGTAAT..............2811.001001000000000000000000000000000000000000000000000000000000000000
.....................................................................................................................................................................................................................................................................................................GCACTGATCGGCCTGGCCGTAATG.............2411.001100000000000000000000000000000000000000000000000000000000000000
...............................................................................................................................................................................................................................................................................................GATATTGCACTGATCGGCCT.......................2011.001000000000000000000000000000000000000000000000000000000001000000
............................................................................................................................................................................................................................................................................................................TCGGCCTGGCCGTAATGGGC..........2011.001100000000000000000000000000000000000000000000000000000000000000
.......................................................................................................................................................................................................................................................................................................ACTGATCGGCCTGGCCGTA................1911.001000000000000000000000001000000000000000000000000000000000000000
..............................................................................................................................................................................................................................................................................................TGATATTGCACTGATCGGCCT.......................2111.001000000000000000001000000000000000000000000000000000000000000000
..................................................................................................................................................................................................................................................................................................ATTGCACTGATCGGCCTGGCCGTAATGGGCC.........3111.001000000000000000000000000000000000000000000000000000000000000001
...................................................................................................................................................................................................................................................................................................TTGCACTGATCGGCCTGGCCGTT................2311.001100000000000000000000000000000000000000000000000000000000000000
droMoj3
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGAAAGCTGATATTGCACTCATTGGCCTGGCTGTCATGGGTCAAAATCTCASizeHit CountTotal NormTotalM046
Female-body		V041
Embryo		V049
Head		V056
Head		M060
Embryo		V110
Male-body
...........................................................................................................................................................................................................................................................................................................ATTGGCCTGGCTGTCATGG............1911.001100000
..................................................................................................................................................................................................................................................................................................ATTGCACTCATTGGCCTGGCTGTCATG.............2711.001100000
...........................................................................................................................................................................................................................................................................................................ATTGGCCTGGCTGTCATGGGT..........2111.001100000
droGri2
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CAGGAAAGCTGATATTGCCCTCATTGGATTGGCTGTAATGGGTCAAAATCTAASizeHit CountTotal NormTotalM041
Female-body		V109
Male-body
...........................................................................................................................................................................................................................................................................................................ATTGGATTGGCTGTAATGGGTCA........2311.00110

Generated: 05/17/2015 at 10:09 PM